title: ATAC-seq from HG03460 (ENCLB378ZRB)

description:
https://www.encodeproject.org/experiments/ENCSR345NVR/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR345NVR
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB378ZRB
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens HG03460 cell line

value: cell line

value: HG03460 LCLs; Donor from the Mende in Sierra Leone (MSL)

value: male

value: ENCBS383WOD at ENCODE; https://www.encodeproject.org/ENCBS383WOD/

value: Derived from ENCODE donor ENCDO499MFJ; https://www.encodeproject.org/ENCDO499MFJ/


title: ATAC-seq from GM19397 (ENCLB232RLJ)

status: Public on Apr 22 2021

type: SRA

city: Stanford

first: ENCODE

last: DCC

state: CA

address: 300 Pasteur Dr

country: USA

institute: ENCODE DCC

description:
https://www.encodeproject.org/experiments/ENCSR839IAD/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR839IAD
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-10
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB232RLJ
fragmentation methods: chemical (Tn5 transposase)

library_source: genomic

data_processing: See GSM*_README.txt supplementary file linked below

molecule: genomic DNA

organism: Homo sapiens

source_name: Homo sapiens GM19397 cell line

tag: line

tag: description

value: GM19397 LCLs; Donor from the Luhya in Webuye, Kenya (LWK)

tag: biosample encode accession

tag: Sex

tag: dev stage

value: adult

tag: age

value: unknown

tag: lab

value: Stephen Montgomery, Stanford

tag: source

value: Coriell

tag: link

value: ENCBS855ELP at ENCODE; https://www.encodeproject.org/ENCBS855ELP/

value: Derived from ENCODE donor ENCDO671BAY; https://www.encodeproject.org/ENCDO671BAY/


title: ATAC-seq from HG03097 (ENCLB163NFM)

description:
https://www.encodeproject.org/experiments/ENCSR608KJD/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR608KJD
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB163NFM
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens HG03097 cell line

value: HG03097 LCLs; Donor from the Mende in Sierra Leone (MSL)

value: female

value: ENCBS554XES at ENCODE; https://www.encodeproject.org/ENCBS554XES/

value: Derived from ENCODE donor ENCDO742ZFH; https://www.encodeproject.org/ENCDO742ZFH/


title: ATAC-seq from HG03565 (ENCLB383XSO)

description:
https://www.encodeproject.org/experiments/ENCSR835WBW/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR835WBW
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB383XSO
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens HG03565 cell line

value: HG03565 LCLs; Donor from the Mende in Sierra Leone (MSL)

value: ENCBS637OXR at ENCODE; https://www.encodeproject.org/ENCBS637OXR/

value: Derived from ENCODE donor ENCDO037SOF; https://www.encodeproject.org/ENCDO037SOF/


title: ATAC-seq from HG03103 (ENCLB146FLK)

description:
https://www.encodeproject.org/experiments/ENCSR833ACP/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR833ACP
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB146FLK
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens HG03103 cell line

value: cell line

value: HG03103 LCLs; Donor from the Esan in Nigeria (ESN)

value: male

value: ENCBS113YHR at ENCODE; https://www.encodeproject.org/ENCBS113YHR/

value: Derived from ENCODE donor ENCDO843HEK; https://www.encodeproject.org/ENCDO843HEK/


title: ATAC-seq from HG03135 (ENCLB277OTG)

description:
https://www.encodeproject.org/experiments/ENCSR096VEO/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR096VEO
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB277OTG
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens HG03135 cell line

value: HG03135 LCLs; Donor from the Esan in Nigeria (ESN)

value: adult

value: unknown

value: ENCBS987JML at ENCODE; https://www.encodeproject.org/ENCBS987JML/

value: Derived from ENCODE donor ENCDO279WUI; https://www.encodeproject.org/ENCDO279WUI/


title: ATAC-seq from HG02642 (ENCLB704NYS)

description:
https://www.encodeproject.org/experiments/ENCSR821QHC/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR821QHC
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB704NYS
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens HG02642 cell line

value: HG02642 LCLs; Donor from the Gambian in Western Divisions in the Gambia (GWD)

value: Stephen Montgomery, Stanford

value: Coriell

value: ENCBS622NKJ at ENCODE; https://www.encodeproject.org/ENCBS622NKJ/

value: Derived from ENCODE donor ENCDO480FPE; https://www.encodeproject.org/ENCDO480FPE/


title: ATAC-seq from GM19372 (ENCLB892QGW)

description:
https://www.encodeproject.org/experiments/ENCSR335JVB/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR335JVB
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB892QGW
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens GM19372 cell line

value: GM19372 LCLs; Donor from the Luhya in Webuye, Kenya (LWK)

value: ENCBS059VNF at ENCODE; https://www.encodeproject.org/ENCBS059VNF/

value: Derived from ENCODE donor ENCDO805VUT; https://www.encodeproject.org/ENCDO805VUT/


title: ATAC-seq from HG03521 (ENCLB217XEO)

description:
https://www.encodeproject.org/experiments/ENCSR594TMY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR594TMY
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB217XEO
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens HG03521 cell line

value: cell line

value: HG03521 LCLs; Donor from the Esan in Nigeria (ESN)

value: ENCBS053ERX at ENCODE; https://www.encodeproject.org/ENCBS053ERX/

value: Derived from ENCODE donor ENCDO992EYG; https://www.encodeproject.org/ENCDO992EYG/


title: ATAC-seq from HG03378 (ENCLB901VGA)

description:
https://www.encodeproject.org/experiments/ENCSR824DUE/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR824DUE
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB901VGA
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens HG03378 cell line

value: HG03378 LCLs; Donor from the Mende in Sierra Leone (MSL)

value: female

value: ENCBS351XYO at ENCODE; https://www.encodeproject.org/ENCBS351XYO/

value: Derived from ENCODE donor ENCDO965KAC; https://www.encodeproject.org/ENCDO965KAC/


title: ATAC-seq from HG03457 (ENCLB977YUJ)

description:
https://www.encodeproject.org/experiments/ENCSR322SBN/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR322SBN
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB977YUJ
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens HG03457 cell line

value: HG03457 LCLs; Donor from the Mende in Sierra Leone (MSL)

value: male

value: adult

value: unknown

value: ENCBS976WAY at ENCODE; https://www.encodeproject.org/ENCBS976WAY/

value: Derived from ENCODE donor ENCDO326JNU; https://www.encodeproject.org/ENCDO326JNU/


title: ATAC-seq from HG02884 (ENCLB161KKY)

description:
https://www.encodeproject.org/experiments/ENCSR604YEQ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR604YEQ
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB161KKY
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens HG02884 cell line

value: HG02884 LCLs; Donor from the Gambian in Western Divisions in the Gambia (GWD)

value: Stephen Montgomery, Stanford

value: Coriell

value: ENCBS879NII at ENCODE; https://www.encodeproject.org/ENCBS879NII/

value: Derived from ENCODE donor ENCDO038ZPT; https://www.encodeproject.org/ENCDO038ZPT/


title: ATAC-seq from HG03575 (ENCLB016JKK)

description:
https://www.encodeproject.org/experiments/ENCSR331JFZ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR331JFZ
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB016JKK
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens HG03575 cell line

value: cell line

value: HG03575 LCLs; Donor from the Mende in Sierra Leone (MSL)

value: ENCBS935YBK at ENCODE; https://www.encodeproject.org/ENCBS935YBK/

value: Derived from ENCODE donor ENCDO378IEH; https://www.encodeproject.org/ENCDO378IEH/


title: ATAC-seq from HG02623 (ENCLB894PEX)

description:
https://www.encodeproject.org/experiments/ENCSR821JHD/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR821JHD
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB894PEX
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens HG02623 cell line

value: HG02623 LCLs; Donor from the Gambian in Western Divisions in the Gambia (GWD)

value: ENCBS696BIK at ENCODE; https://www.encodeproject.org/ENCBS696BIK/

value: Derived from ENCODE donor ENCDO929LTS; https://www.encodeproject.org/ENCDO929LTS/


title: ATAC-seq from GM21737 (ENCLB860SQY)

description:
https://www.encodeproject.org/experiments/ENCSR315QWI/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR315QWI
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB860SQY
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens GM21737 cell line

value: GM21737 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: male

value: ENCBS411HVU at ENCODE; https://www.encodeproject.org/ENCBS411HVU/

value: Derived from ENCODE donor ENCDO381WTR; https://www.encodeproject.org/ENCDO381WTR/


title: ATAC-seq from GM18519 (ENCLB051MRO)

description:
https://www.encodeproject.org/experiments/ENCSR312UCH/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR312UCH
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB051MRO
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens GM18519 cell line

value: GM18519 LCLs; Donor from the Yoruba in Ibadan, Nigeria (YRI)

value: adult

value: unknown

value: ENCBS725IOX at ENCODE; https://www.encodeproject.org/ENCBS725IOX/

value: Derived from ENCODE donor ENCDO531WGA; https://www.encodeproject.org/ENCDO531WGA/


title: ATAC-seq from GM18505 (ENCLB813JNF)

description:
https://www.encodeproject.org/experiments/ENCSR084FHK/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR084FHK
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB813JNF
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens GM18505 cell line

value: GM18505 LCLs; Donor from the Yoruba in Ibadan, Nigeria (YRI)

value: female

value: Stephen Montgomery, Stanford

value: Coriell

value: ENCBS591DIO at ENCODE; https://www.encodeproject.org/ENCBS591DIO/

value: Derived from ENCODE donor ENCDO883LPF; https://www.encodeproject.org/ENCDO883LPF/


title: ATAC-seq from megakaryocyte (ENCLB307DIB)

description:
https://www.encodeproject.org/experiments/ENCSR498DQA/
***************
biological replicate number: 2
technical replicate number: 1
description: PSU mouse Megakaryocyte 50,000 cells ATAC-seq
experiment encode accession: ENCSR498DQA
assay title: ATAC-seq
assembly: mm10
encode release date: 2016-03-30
lab: Ross Hardison, PennState
library encode accession: ENCLB307DIB
nucleic acid starting quantity: 50000
nucleic acid starting quantity units: cells
instrument models: Illumina HiSeq 2000,Illumina NextSeq 500

organism: Mus musculus

source_name: Mus musculus strain C57BL/6J male adult (5-6 weeks) megakaryocyte primary cell

value: megakaryocyte

value: primary cell

value: 5-6 week

value: Ross Hardison, PennState

value: David Bodine

tag: health state

value: ENCBS827KTO at ENCODE; https://www.encodeproject.org/ENCBS827KTO/

value: Derived from ENCODE donor ENCDO072AAA; https://www.encodeproject.org/ENCDO072AAA/


title: ATAC-seq from GM18868 (ENCLB292BIP)

description:
https://www.encodeproject.org/experiments/ENCSR580JBA/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR580JBA
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB292BIP
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens GM18868 cell line

value: cell line

value: GM18868 LCLs; Donor from the Yoruba in Ibadan, Nigeria (YRI)

value: male

value: adult

value: ENCBS303XQZ at ENCODE; https://www.encodeproject.org/ENCBS303XQZ/

value: Derived from ENCODE donor ENCDO847POS; https://www.encodeproject.org/ENCDO847POS/


title: ATAC-seq from GM18873 (ENCLB551MJS)

description:
https://www.encodeproject.org/experiments/ENCSR304ZDQ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR304ZDQ
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB551MJS
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens GM18873 cell line

value: GM18873 LCLs; Donor from the Yoruba in Ibadan, Nigeria (YRI)

value: female

value: unknown

value: Stephen Montgomery, Stanford

value: ENCBS079FBY at ENCODE; https://www.encodeproject.org/ENCBS079FBY/

value: Derived from ENCODE donor ENCDO643GCU; https://www.encodeproject.org/ENCDO643GCU/


title: ATAC-seq from HG03280 (ENCLB405RMM)

description:
https://www.encodeproject.org/experiments/ENCSR554WGQ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR554WGQ
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB405RMM
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens HG03280 cell line

value: HG03280 LCLs; Donor from the Esan in Nigeria (ESN)

value: Coriell

value: ENCBS424WPI at ENCODE; https://www.encodeproject.org/ENCBS424WPI/

value: Derived from ENCODE donor ENCDO069UGQ; https://www.encodeproject.org/ENCDO069UGQ/


title: ATAC-seq from K562 (ENCLB346VBL)

description:
https://www.encodeproject.org/experiments/ENCSR465IDZ/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR465IDZ
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR508LLL
encode release date: 2021-03-16
lab: Will Greenleaf, Stanford
library encode accession: ENCLB346VBL
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 10 nM Vorinostat for 12 hours, preserved by flash-freezing

value: ATAC-seq on human cell line K562

value: 53 year

value: Will Greenleaf, Stanford

value: ATCC

tag: treatments

value: treatment_term_id:CHEBI:45717; treatment_term_name:Vorinostat; treatment_type:chemical; duration:12; duration_units:hour;

value: chronic myelogenous leukemia (CML)

value: ENCBS598JZG at ENCODE; https://www.encodeproject.org/ENCBS598JZG/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: ATAC-seq from HG02973 (ENCLB100MZO)

description:
https://www.encodeproject.org/experiments/ENCSR038WVV/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR038WVV
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB100MZO
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens HG02973 cell line

value: cell line

value: HG02973 LCLs; Donor from the Esan in Nigeria (ESN)

value: male

value: adult

value: ENCBS888IRD at ENCODE; https://www.encodeproject.org/ENCBS888IRD/

value: Derived from ENCODE donor ENCDO771VFC; https://www.encodeproject.org/ENCDO771VFC/


title: ATAC-seq from HG03066 (ENCLB034LBF)

description:
https://www.encodeproject.org/experiments/ENCSR040PBN/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR040PBN
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB034LBF
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens HG03066 cell line

value: HG03066 LCLs; Donor from the Mende in Sierra Leone (MSL)

value: unknown

value: Stephen Montgomery, Stanford

value: Coriell

value: ENCBS293HQE at ENCODE; https://www.encodeproject.org/ENCBS293HQE/

value: Derived from ENCODE donor ENCDO033LJA; https://www.encodeproject.org/ENCDO033LJA/


title: ATAC-seq from K562 (ENCLB547DGS)

description:
https://www.encodeproject.org/experiments/ENCSR978HFU/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR978HFU
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR745KUZ
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB547DGS
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 100 nM GSK J4 for 4 hours, preserved by flash-freezing

value: ATAC-seq on human cell line K562

value: female

value: 53 year

value: Will Greenleaf, Stanford

value: ATCC

value: treatment_term_name:GSK J4; treatment_type:chemical; duration:4; duration_units:hour;

value: ENCBS468STU at ENCODE; https://www.encodeproject.org/ENCBS468STU/


title: ATAC-seq from K562 (ENCLB088UGY)

description:
https://www.encodeproject.org/experiments/ENCSR243BXK/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR243BXK
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR632VDU
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB088UGY
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 0.5 uM JQ1 for 24 hours, preserved by flash-freezing

value: cell line

value: treatment_term_id:CHEBI:137115; treatment_term_name:JQ1; treatment_type:chemical; duration:24; duration_units:hour;

value: chronic myelogenous leukemia (CML)

value: ENCBS804TTB at ENCODE; https://www.encodeproject.org/ENCBS804TTB/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: ATAC-seq from K562 (ENCLB837TGO)

description:
https://www.encodeproject.org/experiments/ENCSR465IDZ/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR465IDZ
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR508LLL
encode release date: 2021-03-16
lab: Will Greenleaf, Stanford
library encode accession: ENCLB837TGO
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: adult

value: treatment_term_id:CHEBI:45717; treatment_term_name:Vorinostat; treatment_type:chemical; duration:12; duration_units:hour;

value: ENCBS555OLP at ENCODE; https://www.encodeproject.org/ENCBS555OLP/


title: ATAC-seq from K562 (ENCLB932AIV)

description:
https://www.encodeproject.org/experiments/ENCSR978HFU/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR978HFU
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR745KUZ
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB932AIV
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: ENCBS138RWT at ENCODE; https://www.encodeproject.org/ENCBS138RWT/


title: ATAC-seq from HG02798 (ENCLB473DTY)

description:
https://www.encodeproject.org/experiments/ENCSR524CPZ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR524CPZ
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB473DTY
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens HG02798 cell line

value: HG02798 LCLs; Donor from the Gambian in Western Divisions in the Gambia (GWD)

value: male

value: unknown

value: Stephen Montgomery, Stanford

value: Coriell

value: ENCBS923TDZ at ENCODE; https://www.encodeproject.org/ENCBS923TDZ/

value: Derived from ENCODE donor ENCDO589DVM; https://www.encodeproject.org/ENCDO589DVM/


title: ATAC-seq from right cardiac atrium (ENCLB867NFM)

description:
https://www.encodeproject.org/experiments/ENCSR452OSK/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human right cardiac atrium
experiment encode accession: ENCSR452OSK
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2020-07-21
lab: Michael Snyder, Stanford
library encode accession: ENCLB867NFM
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens male adult (40 years) right cardiac atrium tissue, preserved by cryopreservation

value: right cardiac atrium

value: tissue

value: 40 year

value: Michael Snyder, Stanford

value: Yiing Lin, MD, PhD

value: DM:no; HTN:yes; CAD:no

value: ENCBS032QTQ at ENCODE; https://www.encodeproject.org/ENCBS032QTQ/

value: Derived from ENCODE donor ENCDO392CRK; https://www.encodeproject.org/ENCDO392CRK/


title: ATAC-seq from GM21390 (ENCLB637NLV)

description:
https://www.encodeproject.org/experiments/ENCSR024WOD/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR024WOD
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB637NLV
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens GM21390 cell line

value: cell line

value: GM21390 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: adult

value: ENCBS686KHA at ENCODE; https://www.encodeproject.org/ENCBS686KHA/

value: Derived from ENCODE donor ENCDO317SJE; https://www.encodeproject.org/ENCDO317SJE/


title: ATAC-seq from HG03095 (ENCLB622EYE)

description:
https://www.encodeproject.org/experiments/ENCSR359HFH/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR359HFH
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB622EYE
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens HG03095 cell line

value: HG03095 LCLs; Donor from the Mende in Sierra Leone (MSL)

value: female

value: unknown

value: Stephen Montgomery, Stanford

value: ENCBS751KFE at ENCODE; https://www.encodeproject.org/ENCBS751KFE/

value: Derived from ENCODE donor ENCDO701OVN; https://www.encodeproject.org/ENCDO701OVN/


title: ATAC-seq from HG03354 (ENCLB104TCJ)

description:
https://www.encodeproject.org/experiments/ENCSR025MEO/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR025MEO
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB104TCJ
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens HG03354 cell line

value: HG03354 LCLs; Donor from the Esan in Nigeria (ESN)

value: Coriell

value: ENCBS364CMI at ENCODE; https://www.encodeproject.org/ENCBS364CMI/

value: Derived from ENCODE donor ENCDO271ELE; https://www.encodeproject.org/ENCDO271ELE/


title: ATAC-seq from K562 (ENCLB932FSV)

description:
https://www.encodeproject.org/experiments/ENCSR974QYY/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR974QYY
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR508LLL
encode release date: 2021-03-16
lab: Will Greenleaf, Stanford
library encode accession: ENCLB932FSV
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 10 nM Panobinostat for 12 hours, preserved by flash-freezing

value: ATAC-seq on human cell line K562

value: 53 year

value: Will Greenleaf, Stanford

value: ATCC

value: treatment_term_id:CHEBI:85991; treatment_term_name:Panobinostat; treatment_type:chemical; duration:12; duration_units:hour;

value: chronic myelogenous leukemia (CML)

value: ENCBS869UVI at ENCODE; https://www.encodeproject.org/ENCBS869UVI/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: ATAC-seq from HG03342 (ENCLB635ABL)

description:
https://www.encodeproject.org/experiments/ENCSR528YDD/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR528YDD
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB635ABL
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens HG03342 cell line

value: cell line

value: HG03342 LCLs; Donor from the Esan in Nigeria (ESN)

value: female

value: adult

value: ENCBS335OWZ at ENCODE; https://www.encodeproject.org/ENCBS335OWZ/

value: Derived from ENCODE donor ENCDO573NZN; https://www.encodeproject.org/ENCDO573NZN/


title: ATAC-seq from K562 (ENCLB043NKJ)

description:
https://www.encodeproject.org/experiments/ENCSR966ZCL/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR966ZCL
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR199HSR
encode release date: 2021-03-16
lab: Will Greenleaf, Stanford
library encode accession: ENCLB043NKJ
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 10 nM Chaetocin for 48 hours, preserved by flash-freezing

value: treatment_term_name:Chaetocin; treatment_type:chemical; duration:48; duration_units:hour;

value: ENCBS009KSN at ENCODE; https://www.encodeproject.org/ENCBS009KSN/


title: ATAC-seq from K562 (ENCLB227YXU)

description:
https://www.encodeproject.org/experiments/ENCSR446UJL/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR446UJL
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR017LGQ
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB227YXU
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 1 uM NCT-503 for 48 hours, preserved by flash-freezing

value: treatment_term_name:NCT-503; treatment_type:chemical; duration:48; duration_units:hour;

value: ENCBS629RIG at ENCODE; https://www.encodeproject.org/ENCBS629RIG/


title: ATAC-seq from HG03175 (ENCLB149CCO)

description:
https://www.encodeproject.org/experiments/ENCSR305XRF/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR305XRF
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-10
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB149CCO
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens HG03175 cell line

value: HG03175 LCLs; Donor from the Esan in Nigeria (ESN)

value: male

value: unknown

value: Stephen Montgomery, Stanford

value: Coriell

value: ENCBS883GAC at ENCODE; https://www.encodeproject.org/ENCBS883GAC/

value: Derived from ENCODE donor ENCDO756WCQ; https://www.encodeproject.org/ENCDO756WCQ/


title: ATAC-seq from GM19023 (ENCLB995TGZ)

description:
https://www.encodeproject.org/experiments/ENCSR512FHU/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR512FHU
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB995TGZ
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens GM19023 cell line

value: cell line

value: GM19023 LCLs; Donor from the Luhya in Webuye, Kenya (LWK)

value: ENCBS473MKT at ENCODE; https://www.encodeproject.org/ENCBS473MKT/

value: Derived from ENCODE donor ENCDO296NPE; https://www.encodeproject.org/ENCDO296NPE/


title: ATAC-seq from GM21381 (ENCLB974IGN)

description:
https://www.encodeproject.org/experiments/ENCSR512YXO/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR512YXO
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB974IGN
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens GM21381 cell line

value: GM21381 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: adult

value: ENCBS295WIH at ENCODE; https://www.encodeproject.org/ENCBS295WIH/

value: Derived from ENCODE donor ENCDO740GUO; https://www.encodeproject.org/ENCDO740GUO/


title: ATAC-seq from K562 (ENCLB421EOW)

description:
https://www.encodeproject.org/experiments/ENCSR974QYY/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR974QYY
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR508LLL
encode release date: 2021-03-16
lab: Will Greenleaf, Stanford
library encode accession: ENCLB421EOW
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: ATAC-seq on human cell line K562

value: female

value: 53 year

value: Will Greenleaf, Stanford

value: ATCC

value: treatment_term_id:CHEBI:85991; treatment_term_name:Panobinostat; treatment_type:chemical; duration:12; duration_units:hour;

value: chronic myelogenous leukemia (CML)

value: ENCBS365UJG at ENCODE; https://www.encodeproject.org/ENCBS365UJG/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: ATAC-seq from K562 (ENCLB493UKS)

description:
https://www.encodeproject.org/experiments/ENCSR966ZCL/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR966ZCL
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR199HSR
encode release date: 2021-03-16
lab: Will Greenleaf, Stanford
library encode accession: ENCLB493UKS
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: cell line

value: treatment_term_name:Chaetocin; treatment_type:chemical; duration:48; duration_units:hour;

value: ENCBS272GTO at ENCODE; https://www.encodeproject.org/ENCBS272GTO/


title: ATAC-seq from K562 (ENCLB467DHS)

description:
https://www.encodeproject.org/experiments/ENCSR446UJL/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR446UJL
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR017LGQ
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB467DHS
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: treatment_term_name:NCT-503; treatment_type:chemical; duration:48; duration_units:hour;

value: ENCBS809LQA at ENCODE; https://www.encodeproject.org/ENCBS809LQA/


title: ATAC-seq from HG03558 (ENCLB940WBY)

description:
https://www.encodeproject.org/experiments/ENCSR278JWM/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR278JWM
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB940WBY
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens HG03558 cell line

value: HG03558 LCLs; Donor from the Mende in Sierra Leone (MSL)

value: adult

value: unknown

value: Stephen Montgomery, Stanford

value: Coriell

value: ENCBS689TLP at ENCODE; https://www.encodeproject.org/ENCBS689TLP/

value: Derived from ENCODE donor ENCDO087EDQ; https://www.encodeproject.org/ENCDO087EDQ/


title: ATAC-seq from K562 (ENCLB646KUH)

description:
https://www.encodeproject.org/experiments/ENCSR442DWQ/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR442DWQ
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR632VDU
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB646KUH
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 0.5 uM MB-3 for 24 hours, preserved by flash-freezing

value: ATAC-seq on human cell line K562

value: female

value: 53 year

value: Will Greenleaf, Stanford

value: ATCC

value: treatment_term_name:MB-3; treatment_type:chemical; duration:24; duration_units:hour;

value: ENCBS807FKR at ENCODE; https://www.encodeproject.org/ENCBS807FKR/


title: ATAC-seq from K562 (ENCLB082SCH)

description:
https://www.encodeproject.org/experiments/ENCSR217QAB/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR217QAB
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR745KUZ
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB082SCH
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 10 nM Bortezomib for 4 hours, preserved by flash-freezing

value: cell line

value: treatment_term_id:CHEBI:52717; treatment_term_name:Bortezomib; treatment_type:chemical; duration:4; duration_units:hour;

value: chronic myelogenous leukemia (CML)

value: ENCBS573GFF at ENCODE; https://www.encodeproject.org/ENCBS573GFF/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: ATAC-seq from K562 (ENCLB715XYZ)

description:
https://www.encodeproject.org/experiments/ENCSR243BXK/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR243BXK
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR632VDU
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB715XYZ
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: adult

value: treatment_term_id:CHEBI:137115; treatment_term_name:JQ1; treatment_type:chemical; duration:24; duration_units:hour;

value: ENCBS367NKC at ENCODE; https://www.encodeproject.org/ENCBS367NKC/


title: ATAC-seq from GM21367 (ENCLB490LUG)

description:
https://www.encodeproject.org/experiments/ENCSR509JPT/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR509JPT
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB490LUG
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens GM21367 cell line

value: GM21367 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: male

value: unknown

value: Stephen Montgomery, Stanford

value: Coriell

value: ENCBS908YUU at ENCODE; https://www.encodeproject.org/ENCBS908YUU/

value: Derived from ENCODE donor ENCDO335VOB; https://www.encodeproject.org/ENCDO335VOB/


title: ATAC-seq from HG03196 (ENCLB650QKJ)

description:
https://www.encodeproject.org/experiments/ENCSR063UNG/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR063UNG
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB650QKJ
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens HG03196 cell line

value: HG03196 LCLs; Donor from the Esan in Nigeria (ESN)

value: ENCBS213IBL at ENCODE; https://www.encodeproject.org/ENCBS213IBL/

value: Derived from ENCODE donor ENCDO224CAO; https://www.encodeproject.org/ENCDO224CAO/


title: ATAC-seq from K562 (ENCLB196CDL)

description:
https://www.encodeproject.org/experiments/ENCSR442DWQ/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR442DWQ
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR632VDU
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB196CDL
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: cell line

value: ATAC-seq on human cell line K562

value: female

value: 53 year

value: Will Greenleaf, Stanford

value: ATCC

value: treatment_term_name:MB-3; treatment_type:chemical; duration:24; duration_units:hour;

value: ENCBS833PDX at ENCODE; https://www.encodeproject.org/ENCBS833PDX/


title: ATAC-seq from K562 (ENCLB865LPK)

description:
https://www.encodeproject.org/experiments/ENCSR217QAB/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR217QAB
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR745KUZ
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB865LPK
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: adult

value: treatment_term_id:CHEBI:52717; treatment_term_name:Bortezomib; treatment_type:chemical; duration:4; duration_units:hour;

value: chronic myelogenous leukemia (CML)

value: ENCBS444LHG at ENCODE; https://www.encodeproject.org/ENCBS444LHG/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: ATAC-seq from K562 (ENCLB965NIT)

description:
https://www.encodeproject.org/experiments/ENCSR214SFA/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR214SFA
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR508LLL
encode release date: 2021-03-16
lab: Will Greenleaf, Stanford
library encode accession: ENCLB965NIT
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 1 uM AR-42 for 12 hours, preserved by flash-freezing

value: treatment_term_name:AR-42; treatment_type:chemical; duration:12; duration_units:hour;

value: ENCBS378GNZ at ENCODE; https://www.encodeproject.org/ENCBS378GNZ/


title: ATAC-seq from GM21786 (ENCLB558KFY)

description:
https://www.encodeproject.org/experiments/ENCSR275LCF/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR275LCF
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB558KFY
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens GM21786 cell line

value: GM21786 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: unknown

value: Stephen Montgomery, Stanford

value: Coriell

value: ENCBS561VVI at ENCODE; https://www.encodeproject.org/ENCBS561VVI/

value: Derived from ENCODE donor ENCDO720TCG; https://www.encodeproject.org/ENCDO720TCG/


title: ATAC-seq from K562 (ENCLB958CLN)

description:
https://www.encodeproject.org/experiments/ENCSR214SFA/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR214SFA
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR508LLL
encode release date: 2021-03-16
lab: Will Greenleaf, Stanford
library encode accession: ENCLB958CLN
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: cell line

value: ATAC-seq on human cell line K562

value: female

value: 53 year

value: Will Greenleaf, Stanford

value: ENCBS312LKL at ENCODE; https://www.encodeproject.org/ENCBS312LKL/


title: ATAC-seq from K562 (ENCLB531ZTX)

description:
https://www.encodeproject.org/experiments/ENCSR214QZO/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR214QZO
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR745KUZ
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB531ZTX
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 1 uM Crizotinib for 4 hours, preserved by flash-freezing

value: adult

value: ATCC

value: treatment_term_id:CHEBI:64310; treatment_term_name:Crizotinib; treatment_type:chemical; duration:4; duration_units:hour;

value: chronic myelogenous leukemia (CML)

value: ENCBS754ZOL at ENCODE; https://www.encodeproject.org/ENCBS754ZOL/


title: ATAC-seq from K562 (ENCLB415GUF)

description:
https://www.encodeproject.org/experiments/ENCSR962TDN/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR962TDN
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR508LLL
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB415GUF
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 0.5 uM JQ1 for 12 hours, preserved by flash-freezing

value: treatment_term_id:CHEBI:137114; treatment_term_name:JQ1; treatment_type:chemical; duration:12; duration_units:hour;

value: ENCBS915HYP at ENCODE; https://www.encodeproject.org/ENCBS915HYP/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: ATAC-seq from GM18520 (ENCLB038TIU)

description:
https://www.encodeproject.org/experiments/ENCSR762YFD/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR762YFD
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB038TIU
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens GM18520 cell line

value: GM18520 LCLs; Donor from the Yoruba in Ibadan, Nigeria (YRI)

value: unknown

value: Stephen Montgomery, Stanford

value: Coriell

value: ENCBS806LNI at ENCODE; https://www.encodeproject.org/ENCBS806LNI/

value: Derived from ENCODE donor ENCDO054PBW; https://www.encodeproject.org/ENCDO054PBW/


title: ATAC-seq from K562 (ENCLB758LMR)

description:
https://www.encodeproject.org/experiments/ENCSR962TDN/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR962TDN
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR508LLL
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB758LMR
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: cell line

value: ATAC-seq on human cell line K562

value: female

value: 53 year

value: ENCBS769CXE at ENCODE; https://www.encodeproject.org/ENCBS769CXE/


title: ATAC-seq from K562 (ENCLB000KIJ)

description:
https://www.encodeproject.org/experiments/ENCSR685YMG/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR685YMG
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR632VDU
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB000KIJ
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 2.5 uM Galeterone for 24 hours, preserved by flash-freezing

value: adult

value: Will Greenleaf, Stanford

value: ATCC

value: treatment_term_name:Galeterone; treatment_type:chemical; duration:24; duration_units:hour;

value: ENCBS642UNE at ENCODE; https://www.encodeproject.org/ENCBS642UNE/


title: ATAC-seq from K562 (ENCLB706RUO)

description:
https://www.encodeproject.org/experiments/ENCSR685YMG/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR685YMG
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR632VDU
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB706RUO
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: chronic myelogenous leukemia (CML)

value: ENCBS958HML at ENCODE; https://www.encodeproject.org/ENCBS958HML/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: ATAC-seq from K562 (ENCLB320QQS)

description:
https://www.encodeproject.org/experiments/ENCSR214QZO/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR214QZO
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR745KUZ
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB320QQS
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: treatment_term_id:CHEBI:64310; treatment_term_name:Crizotinib; treatment_type:chemical; duration:4; duration_units:hour;

value: ENCBS777NHJ at ENCODE; https://www.encodeproject.org/ENCBS777NHJ/


title: ATAC-seq from GM18867 (ENCLB362GVU)

description:
https://www.encodeproject.org/experiments/ENCSR492FJO/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR492FJO
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB362GVU
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens GM18867 cell line

value: GM18867 LCLs; Donor from the Yoruba in Ibadan, Nigeria (YRI)

value: unknown

value: Stephen Montgomery, Stanford

value: Coriell

value: ENCBS180AJA at ENCODE; https://www.encodeproject.org/ENCBS180AJA/

value: Derived from ENCODE donor ENCDO227ZDT; https://www.encodeproject.org/ENCDO227ZDT/


title: ATAC-seq from K562 (ENCLB311MMF)

description:
https://www.encodeproject.org/experiments/ENCSR420NIU/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR420NIU
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR199HSR
encode release date: 2021-03-16
lab: Will Greenleaf, Stanford
library encode accession: ENCLB311MMF
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 10 nM Vorinostat for 48 hours, preserved by flash-freezing

value: cell line

value: ATAC-seq on human cell line K562

value: female

value: 53 year

value: treatment_term_id:CHEBI:45719; treatment_term_name:Vorinostat; treatment_type:chemical; duration:48; duration_units:hour;

value: ENCBS886YEY at ENCODE; https://www.encodeproject.org/ENCBS886YEY/


title: ATAC-seq from K562 (ENCLB601QWI)

description:
https://www.encodeproject.org/experiments/ENCSR199HSR/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR199HSR
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB601QWI
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with DMSO for 48 hours, preserved by flash-freezing

value: adult

value: Will Greenleaf, Stanford

value: ATCC

value: treatment_term_id:CHEBI:28265; treatment_term_name:DMSO; treatment_type:chemical; duration:48; duration_units:hour;

value: chronic myelogenous leukemia (CML)

value: ENCBS731RKX at ENCODE; https://www.encodeproject.org/ENCBS731RKX/


title: DNase-seq from suppressor macrophage (ENCLB698XOA)

description:
https://www.encodeproject.org/experiments/ENCSR011VJK/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR011VJK
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-10-02
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB698XOA
instrument models: Illumina NextSeq 500,Illumina HiSeq 2500

source_name: Homo sapiens male adult (21 years) suppressor macrophage primary cell treated with lipopolysaccharide for 1 hour

value: suppressor macrophage

value: primary cell

value: male

value: 21 year

value: John Stamatoyannopoulos, UW

value: Shelly Heimfeld

value: treatment_term_id:CHEBI:16412; treatment_term_name:lipopolysaccharide; treatment_type:chemical; duration:1; duration_units:hour;

value: ENCBS324LUD at ENCODE; https://www.encodeproject.org/ENCBS324LUD/

value: Derived from ENCODE donor ENCDO733YAB; https://www.encodeproject.org/ENCDO733YAB/


title: ATAC-seq from GM18907 (ENCLB518JMD)

description:
https://www.encodeproject.org/experiments/ENCSR487QSB/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR487QSB
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-10
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB518JMD
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens GM18907 cell line

value: cell line

value: GM18907 LCLs; Donor from the Yoruba in Ibadan, Nigeria (YRI)

value: female

value: unknown

value: Stephen Montgomery, Stanford

value: Coriell

value: ENCBS165WPY at ENCODE; https://www.encodeproject.org/ENCBS165WPY/

value: Derived from ENCODE donor ENCDO002IGY; https://www.encodeproject.org/ENCDO002IGY/


title: ATAC-seq from GM18858 (ENCLB748VDD)

description:
https://www.encodeproject.org/experiments/ENCSR011NJP/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR011NJP
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB748VDD
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens GM18858 cell line

value: GM18858 LCLs; Donor from the Yoruba in Ibadan, Nigeria (YRI)

value: adult

value: ENCBS364ERL at ENCODE; https://www.encodeproject.org/ENCBS364ERL/

value: Derived from ENCODE donor ENCDO695OTG; https://www.encodeproject.org/ENCDO695OTG/


title: ATAC-seq from K562 (ENCLB232ZQN)

description:
https://www.encodeproject.org/experiments/ENCSR199HSR/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR199HSR
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB232ZQN
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: ATAC-seq on human cell line K562

value: 53 year

value: Will Greenleaf, Stanford

value: ATCC

value: treatment_term_id:CHEBI:28265; treatment_term_name:DMSO; treatment_type:chemical; duration:48; duration_units:hour;

value: chronic myelogenous leukemia (CML)

value: ENCBS894NAC at ENCODE; https://www.encodeproject.org/ENCBS894NAC/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: ATAC-seq from K562 (ENCLB150DQQ)

description:
https://www.encodeproject.org/experiments/ENCSR680XOP/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR680XOP
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR745KUZ
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB150DQQ
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 0.5 uM MB-3 for 4 hours, preserved by flash-freezing

value: cell line

value: female

value: treatment_term_name:MB-3; treatment_type:chemical; duration:4; duration_units:hour;

value: ENCBS148QYC at ENCODE; https://www.encodeproject.org/ENCBS148QYC/


title: ATAC-seq from K562 (ENCLB629OSP)

description:
https://www.encodeproject.org/experiments/ENCSR680XOP/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR680XOP
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR745KUZ
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB629OSP
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: ENCBS771TRX at ENCODE; https://www.encodeproject.org/ENCBS771TRX/


title: ATAC-seq from K562 (ENCLB155PWJ)

description:
https://www.encodeproject.org/experiments/ENCSR420NIU/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR420NIU
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR199HSR
encode release date: 2021-03-16
lab: Will Greenleaf, Stanford
library encode accession: ENCLB155PWJ
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: treatment_term_id:CHEBI:45719; treatment_term_name:Vorinostat; treatment_type:chemical; duration:48; duration_units:hour;

value: ENCBS012NMW at ENCODE; https://www.encodeproject.org/ENCBS012NMW/


title: ATAC-seq from K562 (ENCLB976JAN)

description:
https://www.encodeproject.org/experiments/ENCSR197GOQ/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR197GOQ
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR632VDU
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB976JAN
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 100 nM GSK J4 for 24 hours, preserved by flash-freezing

value: adult

value: treatment_term_name:GSK J4; treatment_type:chemical; duration:24; duration_units:hour;

value: ENCBS773PBS at ENCODE; https://www.encodeproject.org/ENCBS773PBS/


title: ATAC-seq from K562 (ENCLB408KYD)

description:
https://www.encodeproject.org/experiments/ENCSR197GOQ/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR197GOQ
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR632VDU
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB408KYD
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: ATAC-seq on human cell line K562

value: 53 year

value: ENCBS505GAC at ENCODE; https://www.encodeproject.org/ENCBS505GAC/


title: ATAC-seq from K562 (ENCLB812BUI)

description:
https://www.encodeproject.org/experiments/ENCSR676UFY/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR676UFY
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR199HSR
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB812BUI
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 5 uM C646 for 48 hours, preserved by flash-freezing

value: Will Greenleaf, Stanford

value: ATCC

value: treatment_term_id:CHEBI:132976; treatment_term_name:C646; treatment_type:chemical; duration:48; duration_units:hour;

value: ENCBS649TUF at ENCODE; https://www.encodeproject.org/ENCBS649TUF/


title: ATAC-seq from GM18511 (ENCLB235GRC)

description:
https://www.encodeproject.org/experiments/ENCSR253QLW/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR253QLW
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB235GRC
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens GM18511 cell line

value: cell line

value: GM18511 LCLs; Donor from the Yoruba in Ibadan, Nigeria (YRI)

value: unknown

value: Stephen Montgomery, Stanford

value: Coriell

value: ENCBS166NJK at ENCODE; https://www.encodeproject.org/ENCBS166NJK/

value: Derived from ENCODE donor ENCDO092TGW; https://www.encodeproject.org/ENCDO092TGW/


title: ATAC-seq from SK-N-SH (ENCLB815ZKS)

description:
https://www.encodeproject.org/experiments/ENCSR182EZJ/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line SK-N-SH (RA treated)
experiment encode accession: ENCSR182EZJ
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2020-08-05
lab: Michael Snyder, Stanford
library encode accession: ENCLB815ZKS
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens SK-N-SH cell line treated with 6 uM all-trans-retinoic acid for 48 hours

value: SK-N-SH

value: female

value: child

value: 4 year

value: Michael Snyder, Stanford

value: treatment_term_id:CHEBI:15367; treatment_term_name:all-trans-retinoic acid; treatment_type:chemical; duration:48; duration_units:hour;

value: Metastatic neuroblastoma from bone marrow

value: ENCBS528YTY at ENCODE; https://www.encodeproject.org/ENCBS528YTY/

value: Derived from ENCODE donor ENCDO000ABD; https://www.encodeproject.org/ENCDO000ABD/


title: ATAC-seq from K562 (ENCLB212MMB)

description:
https://www.encodeproject.org/experiments/ENCSR676UFY/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR676UFY
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR199HSR
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB212MMB
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: ATAC-seq on human cell line K562

value: adult

value: 53 year

value: Will Greenleaf, Stanford

value: ATCC

value: treatment_term_id:CHEBI:132976; treatment_term_name:C646; treatment_type:chemical; duration:48; duration_units:hour;

value: chronic myelogenous leukemia (CML)

value: ENCBS603PCF at ENCODE; https://www.encodeproject.org/ENCBS603PCF/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: ATAC-seq from SK-N-SH (ENCLB252SEN)

description:
https://www.encodeproject.org/experiments/ENCSR182EZJ/
***************
biological replicate number: 3
technical replicate number: 1
description: ATAC-seq on human cell line SK-N-SH (RA treated)
experiment encode accession: ENCSR182EZJ
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2020-08-05
lab: Michael Snyder, Stanford
library encode accession: ENCLB252SEN
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: SK-N-SH

value: cell line

value: female

value: ENCBS228SDJ at ENCODE; https://www.encodeproject.org/ENCBS228SDJ/


title: ATAC-seq from SK-N-SH (ENCLB575VWN)

description:
https://www.encodeproject.org/experiments/ENCSR182EZJ/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line SK-N-SH (RA treated)
experiment encode accession: ENCSR182EZJ
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2020-08-05
lab: Michael Snyder, Stanford
library encode accession: ENCLB575VWN
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: child

value: 4 year

value: Michael Snyder, Stanford

value: treatment_term_id:CHEBI:15367; treatment_term_name:all-trans-retinoic acid; treatment_type:chemical; duration:48; duration_units:hour;

value: ENCBS614HHB at ENCODE; https://www.encodeproject.org/ENCBS614HHB/


title: ATAC-seq from HG03064 (ENCLB667BOC)

description:
https://www.encodeproject.org/experiments/ENCSR487SOP/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR487SOP
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB667BOC
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens HG03064 cell line

value: HG03064 LCLs; Donor from the Mende in Sierra Leone (MSL)

value: adult

value: unknown

value: Stephen Montgomery, Stanford

value: Coriell

value: ENCBS035JYQ at ENCODE; https://www.encodeproject.org/ENCBS035JYQ/

value: Derived from ENCODE donor ENCDO293YOP; https://www.encodeproject.org/ENCDO293YOP/


title: ATAC-seq from K562 (ENCLB933NPK)

description:
https://www.encodeproject.org/experiments/ENCSR935JVI/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR935JVI
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR199HSR
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB933NPK
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 2.5 uM Galeterone for 48 hours, preserved by flash-freezing

value: ATAC-seq on human cell line K562

value: 53 year

value: Will Greenleaf, Stanford

value: ATCC

value: treatment_term_name:Galeterone; treatment_type:chemical; duration:48; duration_units:hour;

value: chronic myelogenous leukemia (CML)

value: ENCBS550IAM at ENCODE; https://www.encodeproject.org/ENCBS550IAM/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: ATAC-seq from K562 (ENCLB957NZI)

description:
https://www.encodeproject.org/experiments/ENCSR935JVI/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR935JVI
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR199HSR
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB957NZI
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: cell line

value: female

value: ENCBS561OZM at ENCODE; https://www.encodeproject.org/ENCBS561OZM/


title: ATAC-seq from HG03571 (ENCLB839MLB)

description:
https://www.encodeproject.org/experiments/ENCSR000RBT/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR000RBT
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB839MLB
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens HG03571 cell line

value: HG03571 LCLs; Donor from the Mende in Sierra Leone (MSL)

value: male

value: adult

value: ENCBS118JKJ at ENCODE; https://www.encodeproject.org/ENCBS118JKJ/

value: Derived from ENCODE donor ENCDO250WAH; https://www.encodeproject.org/ENCDO250WAH/


title: ATAC-seq from K562 (ENCLB955WCA)

description:
https://www.encodeproject.org/experiments/ENCSR934FTO/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR934FTO
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR068MIW
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB955WCA
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 1 uM ARS-853 for 24 hours, preserved by flash-freezing

value: treatment_term_name:ARS-853; treatment_type:chemical; duration:24; duration_units:hour;

value: ENCBS422GDV at ENCODE; https://www.encodeproject.org/ENCBS422GDV/


title: ATAC-seq from K562 (ENCLB048URT)

description:
https://www.encodeproject.org/experiments/ENCSR180IJO/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR180IJO
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR199HSR
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB048URT
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 1 uM AR-42 for 48 hours, preserved by flash-freezing

value: ATAC-seq on human cell line K562

value: 53 year

value: treatment_term_name:AR-42; treatment_type:chemical; duration:48; duration_units:hour;

value: ENCBS035LOH at ENCODE; https://www.encodeproject.org/ENCBS035LOH/


title: ATAC-seq from K562 (ENCLB006SCY)

description:
https://www.encodeproject.org/experiments/ENCSR179IAC/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR179IAC
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR199HSR
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB006SCY
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 0.5 uM JQ1 for 48 hours, preserved by flash-freezing

value: Will Greenleaf, Stanford

value: ATCC

value: treatment_term_id:CHEBI:137116; treatment_term_name:JQ1; treatment_type:chemical; duration:48; duration_units:hour;

value: chronic myelogenous leukemia (CML)

value: ENCBS705MSB at ENCODE; https://www.encodeproject.org/ENCBS705MSB/


title: ATAC-seq from K562 (ENCLB950LWI)

description:
https://www.encodeproject.org/experiments/ENCSR180IJO/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR180IJO
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR199HSR
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB950LWI
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: cell line

value: female

value: ENCBS673DXS at ENCODE; https://www.encodeproject.org/ENCBS673DXS/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: ATAC-seq from K562 (ENCLB223VRN)

description:
https://www.encodeproject.org/experiments/ENCSR179IAC/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR179IAC
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR199HSR
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB223VRN
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: adult

value: ENCBS711FBF at ENCODE; https://www.encodeproject.org/ENCBS711FBF/


title: ATAC-seq from HG03060 (ENCLB268ESU)

description:
https://www.encodeproject.org/experiments/ENCSR470ZNM/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR470ZNM
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-02-11
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB268ESU
fragmentation methods: chemical (Tn5 transposase)

source_name: Homo sapiens HG03060 cell line

value: HG03060 LCLs; Donor from the Mende in Sierra Leone (MSL)

value: male

value: unknown

value: Stephen Montgomery, Stanford

value: Coriell

value: ENCBS344MAF at ENCODE; https://www.encodeproject.org/ENCBS344MAF/

value: Derived from ENCODE donor ENCDO316WAT; https://www.encodeproject.org/ENCDO316WAT/


title: ATAC-seq from K562 (ENCLB211YHL)

description:
https://www.encodeproject.org/experiments/ENCSR165JXS/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR165JXS
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR745KUZ
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB211YHL
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 0.5 uM JQ1 for 4 hours, preserved by flash-freezing

value: ATAC-seq on human cell line K562

value: 53 year

value: Will Greenleaf, Stanford

value: ATCC

value: treatment_term_id:CHEBI:137113; treatment_term_name:JQ1; treatment_type:chemical; duration:4; duration_units:hour;

value: ENCBS314SAD at ENCODE; https://www.encodeproject.org/ENCBS314SAD/


title: ATAC-seq from K562 (ENCLB047OEL)

description:
https://www.encodeproject.org/experiments/ENCSR920YDG/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR920YDG
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR508LLL
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB047OEL
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 10 nM Bortezomib for 12 hours, preserved by flash-freezing

value: cell line

value: female

value: treatment_term_id:CHEBI:52718; treatment_term_name:Bortezomib; treatment_type:chemical; duration:12; duration_units:hour;

value: chronic myelogenous leukemia (CML)

value: ENCBS935PZN at ENCODE; https://www.encodeproject.org/ENCBS935PZN/


title: ATAC-seq from K562 (ENCLB875AFE)

description:
https://www.encodeproject.org/experiments/ENCSR163VQD/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR163VQD
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR632VDU
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB875AFE
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 1 uM Crizotinib for 24 hours, preserved by flash-freezing

value: adult

value: treatment_term_id:CHEBI:64312; treatment_term_name:Crizotinib; treatment_type:chemical; duration:24; duration_units:hour;

value: ENCBS567MQQ at ENCODE; https://www.encodeproject.org/ENCBS567MQQ/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: ATAC-seq from K562 (ENCLB716NVW)

description:
https://www.encodeproject.org/experiments/ENCSR163VQD/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR163VQD
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR632VDU
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB716NVW
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: ENCBS714BIL at ENCODE; https://www.encodeproject.org/ENCBS714BIL/


title: ATAC-seq from K562 (ENCLB654QFK)

description:
https://www.encodeproject.org/experiments/ENCSR644KPP/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR644KPP
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR632VDU
encode release date: 2021-03-16
lab: Will Greenleaf, Stanford
library encode accession: ENCLB654QFK
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 10 nM Vorinostat for 24 hours, preserved by flash-freezing

value: treatment_term_id:CHEBI:45718; treatment_term_name:Vorinostat; treatment_type:chemical; duration:24; duration_units:hour;

value: ENCBS246JAD at ENCODE; https://www.encodeproject.org/ENCBS246JAD/


title: ATAC-seq from K562 (ENCLB725ASC)

description:
https://www.encodeproject.org/experiments/ENCSR644KPP/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR644KPP
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR632VDU
encode release date: 2021-03-16
lab: Will Greenleaf, Stanford
library encode accession: ENCLB725ASC
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: ATAC-seq on human cell line K562

value: 53 year

value: ENCBS947XAX at ENCODE; https://www.encodeproject.org/ENCBS947XAX/


title: ATAC-seq from K562 (ENCLB939BHO)

description:
https://www.encodeproject.org/experiments/ENCSR888JRM/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR888JRM
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR199HSR
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB939BHO
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 100 nM GSK J4 for 48 hours, preserved by flash-freezing

value: Will Greenleaf, Stanford

value: ATCC

value: treatment_term_name:GSK J4; treatment_type:chemical; duration:48; duration_units:hour;

value: ENCBS319MWK at ENCODE; https://www.encodeproject.org/ENCBS319MWK/


title: ATAC-seq from K562 (ENCLB292YOI)

description:
https://www.encodeproject.org/experiments/ENCSR874GAJ/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR874GAJ
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR745KUZ
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB292YOI
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 5 uM C646 for 4 hours, preserved by flash-freezing

value: cell line

value: female

value: treatment_term_name:C646; treatment_type:chemical; duration:4; duration_units:hour;

value: ENCBS215NNN at ENCODE; https://www.encodeproject.org/ENCBS215NNN/


title: ATAC-seq from K562 (ENCLB740XWQ)

description:
https://www.encodeproject.org/experiments/ENCSR888JRM/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR888JRM
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR199HSR
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB740XWQ
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: adult

value: chronic myelogenous leukemia (CML)

value: ENCBS800VAU at ENCODE; https://www.encodeproject.org/ENCBS800VAU/


title: ATAC-seq from K562 (ENCLB938RJN)

description:
https://www.encodeproject.org/experiments/ENCSR390UVH/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR390UVH
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR508LLL
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB938RJN
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 2.5 uM Galeterone for 12 hours, preserved by flash-freezing

value: treatment_term_name:Galeterone; treatment_type:chemical; duration:12; duration_units:hour;

value: ENCBS963FOE at ENCODE; https://www.encodeproject.org/ENCBS963FOE/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: ATAC-seq from K562 (ENCLB941QFV)

description:
https://www.encodeproject.org/experiments/ENCSR390UVH/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR390UVH
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR508LLL
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB941QFV
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: ATAC-seq on human cell line K562

value: ENCBS395IJA at ENCODE; https://www.encodeproject.org/ENCBS395IJA/


title: ATAC-seq from K562 (ENCLB838USY)

description:
https://www.encodeproject.org/experiments/ENCSR874GAJ/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR874GAJ
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR745KUZ
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB838USY
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: 53 year

value: ENCBS736LNC at ENCODE; https://www.encodeproject.org/ENCBS736LNC/


title: ATAC-seq from K562 (ENCLB135OJM)

description:
https://www.encodeproject.org/experiments/ENCSR366CEQ/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR366CEQ
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR745KUZ
encode release date: 2021-03-16
lab: Will Greenleaf, Stanford
library encode accession: ENCLB135OJM
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 1 uM AR-42 for 4 hours, preserved by flash-freezing

value: Will Greenleaf, Stanford

value: ATCC

value: treatment_term_name:AR-42; treatment_type:chemical; duration:4; duration_units:hour;

value: ENCBS778NQG at ENCODE; https://www.encodeproject.org/ENCBS778NQG/


title: ATAC-seq from K562 (ENCLB948MZK)

description:
https://www.encodeproject.org/experiments/ENCSR632VDU/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR632VDU
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB948MZK
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with DMSO for 24 hours, preserved by flash-freezing

value: cell line

value: female

value: treatment_term_id:CHEBI:28264; treatment_term_name:DMSO; treatment_type:chemical; duration:24; duration_units:hour;

value: ENCBS855EIV at ENCODE; https://www.encodeproject.org/ENCBS855EIV/


title: ATAC-seq from K562 (ENCLB219DJZ)

description:
https://www.encodeproject.org/experiments/ENCSR632VDU/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR632VDU
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB219DJZ
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: adult

value: chronic myelogenous leukemia (CML)

value: ENCBS502MHG at ENCODE; https://www.encodeproject.org/ENCBS502MHG/


title: ATAC-seq from K562 (ENCLB151NQB)

description:
https://www.encodeproject.org/experiments/ENCSR121GEL/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR121GEL
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR508LLL
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB151NQB
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 1 uM Crizotinib for 12 hours, preserved by flash-freezing

value: treatment_term_id:CHEBI:64311; treatment_term_name:Crizotinib; treatment_type:chemical; duration:12; duration_units:hour;

value: ENCBS974SID at ENCODE; https://www.encodeproject.org/ENCBS974SID/


title: ATAC-seq from K562 (ENCLB155ABW)

description:
https://www.encodeproject.org/experiments/ENCSR934FTO/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR934FTO
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR068MIW
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB155ABW
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: ATAC-seq on human cell line K562

value: treatment_term_name:ARS-853; treatment_type:chemical; duration:24; duration_units:hour;

value: ENCBS512NQI at ENCODE; https://www.encodeproject.org/ENCBS512NQI/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: ATAC-seq from K562 (ENCLB939LPS)

description:
https://www.encodeproject.org/experiments/ENCSR121GEL/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR121GEL
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR508LLL
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB939LPS
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: 53 year

value: Will Greenleaf, Stanford

value: ENCBS474CDO at ENCODE; https://www.encodeproject.org/ENCBS474CDO/


title: ATAC-seq from K562 (ENCLB935LKQ)

description:
https://www.encodeproject.org/experiments/ENCSR343TQX/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR343TQX
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR632VDU
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB935LKQ
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 10 nM Bortezomib for 24 hours, preserved by flash-freezing

value: ATCC

value: treatment_term_id:CHEBI:52719; treatment_term_name:Bortezomib; treatment_type:chemical; duration:24; duration_units:hour;

value: ENCBS982BXP at ENCODE; https://www.encodeproject.org/ENCBS982BXP/


title: ATAC-seq from K562 (ENCLB683WZE)

description:
https://www.encodeproject.org/experiments/ENCSR343TQX/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR343TQX
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR632VDU
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB683WZE
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: cell line

value: female

value: ENCBS385INW at ENCODE; https://www.encodeproject.org/ENCBS385INW/


title: ATAC-seq from K562 (ENCLB061AIL)

description:
https://www.encodeproject.org/experiments/ENCSR342GFK/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR342GFK
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR745KUZ
encode release date: 2021-03-16
lab: Will Greenleaf, Stanford
library encode accession: ENCLB061AIL
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 10 nM Vorinostat for 4 hours, preserved by flash-freezing

value: adult

value: treatment_term_id:CHEBI:45716; treatment_term_name:Vorinostat; treatment_type:chemical; duration:4; duration_units:hour;

value: chronic myelogenous leukemia (CML)

value: ENCBS187GAC at ENCODE; https://www.encodeproject.org/ENCBS187GAC/


title: ATAC-seq from K562 (ENCLB539JGX)

description:
https://www.encodeproject.org/experiments/ENCSR342GFK/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR342GFK
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR745KUZ
encode release date: 2021-03-16
lab: Will Greenleaf, Stanford
library encode accession: ENCLB539JGX
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: ATAC-seq on human cell line K562

value: ENCBS344ULO at ENCODE; https://www.encodeproject.org/ENCBS344ULO/


title: ATAC-seq from K562 (ENCLB030VSR)

description:
https://www.encodeproject.org/experiments/ENCSR165JXS/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR165JXS
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR745KUZ
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB030VSR
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: treatment_term_id:CHEBI:137113; treatment_term_name:JQ1; treatment_type:chemical; duration:4; duration_units:hour;

value: ENCBS438MZS at ENCODE; https://www.encodeproject.org/ENCBS438MZS/


title: ATAC-seq from K562 (ENCLB721FLL)

description:
https://www.encodeproject.org/experiments/ENCSR096HVF/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR096HVF
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR199HSR
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB721FLL
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 10 nM Bortezomib for 48 hours, preserved by flash-freezing

value: 53 year

value: treatment_term_id:CHEBI:52720; treatment_term_name:Bortezomib; treatment_type:chemical; duration:48; duration_units:hour;

value: ENCBS265CFU at ENCODE; https://www.encodeproject.org/ENCBS265CFU/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: ATAC-seq from K562 (ENCLB122TZI)

description:
https://www.encodeproject.org/experiments/ENCSR091YVK/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR091YVK
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR017LGQ
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB122TZI
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 1 uM EED226 for 48 hours, preserved by flash-freezing

value: Will Greenleaf, Stanford

value: ATCC

value: treatment_term_name:EED226; treatment_type:chemical; duration:48; duration_units:hour;

value: ENCBS883ZUN at ENCODE; https://www.encodeproject.org/ENCBS883ZUN/


title: ATAC-seq from K562 (ENCLB134VCV)

description:
https://www.encodeproject.org/experiments/ENCSR920YDG/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR920YDG
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR508LLL
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB134VCV
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: cell line

value: female

value: treatment_term_id:CHEBI:52718; treatment_term_name:Bortezomib; treatment_type:chemical; duration:12; duration_units:hour;

value: ENCBS663DYW at ENCODE; https://www.encodeproject.org/ENCBS663DYW/


title: ATAC-seq from K562 (ENCLB116OCX)

description:
https://www.encodeproject.org/experiments/ENCSR822IYG/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR822IYG
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR508LLL
encode release date: 2021-03-16
lab: Will Greenleaf, Stanford
library encode accession: ENCLB116OCX
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 10 nM Chaetocin for 12 hours, preserved by flash-freezing

value: adult

value: treatment_term_name:Chaetocin; treatment_type:chemical; duration:12; duration_units:hour;

value: chronic myelogenous leukemia (CML)

value: ENCBS908WEC at ENCODE; https://www.encodeproject.org/ENCBS908WEC/


title: ATAC-seq from SK-N-SH (ENCLB886RHE)

description:
https://www.encodeproject.org/experiments/ENCSR587TRP/
***************
biological replicate number: 3
technical replicate number: 1
description: ATAC-seq on human cell line SK-N-SH
experiment encode accession: ENCSR587TRP
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2020-08-05
lab: Michael Snyder, Stanford
library encode accession: ENCLB886RHE
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens SK-N-SH cell line treated with 6 uM all-trans-retinoic acid for 48 hours

value: SK-N-SH

value: child

value: 4 year

value: Michael Snyder, Stanford

value: treatment_term_id:CHEBI:15367; treatment_term_name:all-trans-retinoic acid; treatment_type:chemical; duration:48; duration_units:hour;

value: Metastatic neuroblastoma from bone marrow

value: ENCBS460YKE at ENCODE; https://www.encodeproject.org/ENCBS460YKE/

value: Derived from ENCODE donor ENCDO000ABD; https://www.encodeproject.org/ENCDO000ABD/


title: ATAC-seq from SK-N-SH (ENCLB543XOK)

description:
https://www.encodeproject.org/experiments/ENCSR587TRP/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line SK-N-SH
experiment encode accession: ENCSR587TRP
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2020-08-05
lab: Michael Snyder, Stanford
library encode accession: ENCLB543XOK
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: ATCC

value: ENCBS612PAQ at ENCODE; https://www.encodeproject.org/ENCBS612PAQ/


title: ATAC-seq from K562 (ENCLB046WRD)

description:
https://www.encodeproject.org/experiments/ENCSR091YVK/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR091YVK
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR017LGQ
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB046WRD
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: cell line

value: ATAC-seq on human cell line K562

value: female

value: 53 year

value: Will Greenleaf, Stanford

value: treatment_term_name:EED226; treatment_type:chemical; duration:48; duration_units:hour;

value: ENCBS941HKL at ENCODE; https://www.encodeproject.org/ENCBS941HKL/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: ATAC-seq from SK-N-SH (ENCLB772RMG)

description:
https://www.encodeproject.org/experiments/ENCSR587TRP/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line SK-N-SH
experiment encode accession: ENCSR587TRP
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2020-08-05
lab: Michael Snyder, Stanford
library encode accession: ENCLB772RMG
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: SK-N-SH

value: child

value: ENCBS037ALL at ENCODE; https://www.encodeproject.org/ENCBS037ALL/


title: ATAC-seq from K562 (ENCLB147XGY)

description:
https://www.encodeproject.org/experiments/ENCSR366CEQ/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR366CEQ
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR745KUZ
encode release date: 2021-03-16
lab: Will Greenleaf, Stanford
library encode accession: ENCLB147XGY
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: adult

value: treatment_term_name:AR-42; treatment_type:chemical; duration:4; duration_units:hour;

value: chronic myelogenous leukemia (CML)

value: ENCBS401YQI at ENCODE; https://www.encodeproject.org/ENCBS401YQI/


title: ATAC-seq from K562 (ENCLB550ELU)

description:
https://www.encodeproject.org/experiments/ENCSR314EDO/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR314EDO
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR632VDU
encode release date: 2021-03-16
lab: Will Greenleaf, Stanford
library encode accession: ENCLB550ELU
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 10 nM Panobinostat for 24 hours, preserved by flash-freezing

value: ATCC

value: treatment_term_id:CHEBI:85992; treatment_term_name:Panobinostat; treatment_type:chemical; duration:24; duration_units:hour;

value: ENCBS916NZS at ENCODE; https://www.encodeproject.org/ENCBS916NZS/


title: ATAC-seq from WTC11 (ENCLB745RLS)

description:
https://www.encodeproject.org/experiments/ENCSR089KIJ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR089KIJ
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2020-07-30
lab: Yin Shen, UCSF
library encode accession: ENCLB745RLS

source_name: Homo sapiens WTC11 cell line genetically modified (insertion) using TALEN

value: cell line

value: male

value: 30 year

value: Yin Shen, UCSF

value: Li Gan

tag: passage number

value: ENCBS008UET at ENCODE; https://www.encodeproject.org/ENCBS008UET/

value: Derived from ENCODE donor ENCDO882UJI; https://www.encodeproject.org/ENCDO882UJI/


title: ATAC-seq from K562 (ENCLB827SLZ)

description:
https://www.encodeproject.org/experiments/ENCSR314EDO/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR314EDO
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR632VDU
encode release date: 2021-03-16
lab: Will Greenleaf, Stanford
library encode accession: ENCLB827SLZ
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: ATAC-seq on human cell line K562

value: female

value: 53 year

value: Will Greenleaf, Stanford

value: ENCBS453UUD at ENCODE; https://www.encodeproject.org/ENCBS453UUD/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: ATAC-seq from K562 (ENCLB866EWB)

description:
https://www.encodeproject.org/experiments/ENCSR803QIE/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human cell line K562
experiment encode accession: ENCSR803QIE
assay title: ATAC-seq
assembly: GRCh38
possible controls: ENCSR199HSR
encode release date: 2021-03-15
lab: Will Greenleaf, Stanford
library encode accession: ENCLB866EWB
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens K562 cell line treated with 0.5 uM MB-3 for 48 hours, preserved by flash-freezing

value: adult

value: treatment_term_name:MB-3; treatment_type:chemical; duration:48; duration_units:hour;

value: chronic myelogenous leukemia (CML)

value: ENCBS800VFZ at ENCODE; https://www.encodeproject.org/ENCBS800VFZ/


title: ATAC-seq from WTC11 (ENCLB868CJL)

description:
https://www.encodeproject.org/experiments/ENCSR089KIJ/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR089KIJ
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2020-07-30
lab: Yin Shen, UCSF
library encode accession: ENCLB868CJL

value: cell line

value: ENCBS032HVZ at ENCODE; https://www.encodeproject.org/ENCBS032HVZ/