title: RM 13 ip53 +D Rep2

city: Goettingen

first: Gabriela

last: Salinas

state: Lower-Saxony

address: Kreuzbergring 57

department: Department of Pathology

institute: Universitaetsmedizin Goettingen

data_processing:
Sequence images were transformed with Illumina software BaseCaller to BCL files, which was demultiplexed to fastq files with bcl2fastq v2.20.0.422
Sequences were aligned to the genome reference hg38 sequence using the STAR aligner 2.5.2a using default parameters
Read counting was performed using featureCounts version 1.5.0-p1
Supplementary_files_format_and_content: hg38 gene version 100

source_name: RPE1 hTERT

growth_protocol: Human retinal pigment epithelium cell line RPE1 immortalized with hTERT overexpression was used. RPE-1 cells were cultured in DMEM-F12 medium supplemented with 10% Fetal Bovine Serum and Pen strep (Gibco).

extract_protocol:
RNA was extracted using Qiagen Rneasy mini kit as per the manfacturers instructions. On column DNA digestion was performed using recombinant DNASE to remove genomic DNA
RNA-seq libraries were performed using 200 ng total RNA of a non stranded RNA Seq, massively-parallel mRNA sequencing approach from Illumina (TruSeq stranded total RNA Library Preparation , Illumina).  Libraries were prepared on the automation (Beckman Coulter’s Biomek FXP workstation)

treatment_protocol: For ip53 cell lines, to induce p53, cells with treated with doxycycline for 48 h and cells are collected for mRNA extraction

value: RPE1 immortalized with hTERT

value: Cells lines with inducible p53

tag: dox treatment

value: with doxycycline

tag: karyotype

value: Monosomy Chr. 13


title: meCLIP_MDAMB231_HOTAIR_A783U_rep3_IP

status: Public on May 15 2021

type: SRA

city: Mobile

first: Justin

last: Roberts

state: AL

address: 5851 USA Drive North, MSB 3370

department: Pharmacology

country: USA

institute: University of South Alabama

description: cDNA

library_source: transcriptomic

data_processing:
Library strategy: MeCLIP
For meCLIP samples, the reads were analyzed using the Snakemake workflow that is described in the protocol (PMID:33376190).
For the RNAseq samples, the reads were first inspected for appropriate quality using FastQC (v. 0.11.7).
The indexed Illumina adapters were then removed using Cutadapt (v. 2.4) and then briefly analyzed visually once more with FastQC to ensure all adapters are successfully removed.
Gene expression was quantified using Salmon (1.4.0) and then analyzed using DEseq2 (3.12) to generate lists of differentially expressed genes.
Genome_build: hg19 (meCLIP) / hg38 (RNAseq)
Supplementary_files_format_and_content: BED files were generated using the meCLIP workflow and consist of identified m6A sites for each sample.
Supplementary_files_format_and_content: quant.sf files were generated using Salmon and consist of quantification estimates (TPM) for each transcript.

molecule: total RNA

organism: Homo sapiens

source_name: breast cancer cell

tag: cell line

tag: genotype/variation

value: overexpressing lncRNA HOTAIR


title: RM 13 ip53 +D Rep1

country: Germany


title: SC-E13-5-placenta-yolk

city: Beijing

first: Min

last: Yang

state: Beijing

address: No. 5, yiheyuan road, haidian district,

country: China

institute: Peking University

data_processing:
For single-cell RNA seq, cellranger was used for the pre-processing and Seurat was used for the downstream analysis. Bismark was used for WGBS analysis. The company, Lc-bio Technologies, constructed the Ribo-seq libraries and performed the preliminary bioinformatics.
Genome_build: mm10
Supplementary_files_format_and_content: count, bismark.coverage

organism: Mus musculus

source_name: mESC

extract_protocol:
DNA and RNA extracted according to the manufacturer’s instructions.
Libraries of WGBS-seq, single-cell seq and ribo-seq constructed according to the manufacturer's instructions.

tag: tissue

value: placenta and yolk sac


title: hPGCLC_A5_rep2_c0

city: Charlestown

first: Mutsumi

last: Kobayashi

state: Massachusetts

address: Building 147, 13th street, Rm# 7103

institute: MGH, center for cancer reserch

data_processing:
Illumina Casava1.7 software used for basecalling.
Sequenced reads were trimmed for adaptor sequence, and masked for low-complexity or low-quality sequence, then mapped to hg38 whole genome using STAR. The STAR genome reference was constructed for 75 nt, and run parameters included --sjdbOverhang 74.
Reads mapped on genes were counted using Bioconductor package 'Rsubread," and the counts were subjected to normalization and differentially expressged gene detection using Bioconductor package 'edgeR.'
Genome_build: hg38
Supplementary_files_format_and_content: tab-delimited text files include Normalized counts by EdgeR for each Sample ...
Supplementary_files_format_and_content: Matrix table with raw gene counts for every gene and every sample

source_name: human PGCLC

growth_protocol: Human iPSCs were maintained in the mTeSR plus medium and converted to hPGCLCs. Freshly isolated hPGCLCs were cultured in the hPGCLC maintenance media. Human EGCs were converted from long-term cultured hPGCLCs using EG derivation madium.

extract_protocol:
Three thousand cells were subjected to direct lysis for cDNA synthesis using Smart-Seq v4 Ultra Low Input RNA Kit.
RNA libraries were prepared for sequencing using Nextera XT DNA Library Prep Kit

treatment_protocol: human PGCLCs were harvested at each time point.

tag: Sex

value: male

tag: cell id

tag: cell type

value: freshly isolated human PGCLC


title: RM 13 ip53 -D Rep3

value: No doxycycline


title: hPGCLC_A5_rep1_c0


title: meCLIP_MDAMB231_HOTAIR_A783U_rep3_INPUT

description: cDNA


title: SC-TBLC

value: mESC cultured in SLP medium


title: SC-PSC

value: mESC cultured in serum/lif medium


title: hEGC_F2

source_name: human EG

value: female

value: human EGC


title: RM 13 ip53 -D Rep2


title: meCLIP_MDAMB231_HOTAIR_A783U_rep1_IP

description: cDNA


title: C13* shCEBPB cell line8

city: WuHan

first: Zheng

last: Xu

address: 13 HangKong road, HanKou, WuHan city, HuBei province, China

institute: Hua Zhong University of Science and Technology

description:
R-8
Processed data file: fpkm.txt

data_processing:
150-bp paired-end sequencing was performed on the Illumina Novaseq6000 platform.
The original data was processed with no-load removal, joint removal, pollution sequence and low-quality reads to obtain clean reads.
Basic quality control of clean reads was conducted using FastQC.
Clearly filtered reads were mapped to hg38 by using TopHat.
In order to compare gene expression between different samples and different genes, we use fragments per kilobase of exon per million fragments  mapped (FPKM) to normalize the original expression of genes (Normalization).
Differentially expressed genes were identified using the edgeR (exact) algorithm.
Genome_build: hg38
Supplementary_files_format_and_content: Matrix table with fpkm for every gene and every sample.

source_name: ovarian carcinoma

growth_protocol: A2780 were purchased from the American Type Culture Collection (USA). The C13* cell line was gift from Professor Benjamin K. Tsang of the Ottawa Health Research Institute (Canada). The cell lines were maintained in RIPM-1640 (Gibco) supplemented with 10% fetal bovine serum (Gibco).

extract_protocol:
Total RNA was extracted from cells by using TRIzol reagent (Invitrogen).
RNA libraries were prepared for sequencing using standard Illumina protocols.

treatment_protocol: A stable resistant cell strain was generated by culturing A2780 in the continued presence of olaparib. Resistance emerged with gradual increase in exposure. When the IC50 of the resistant strain was 30 times that of the parent line, we considered that an olaparib-resistant strain had been developed. shRNA lentivirus was used to knockdown C/EBPβ expression in C13*.

value: adenocarcinoma

tag: treatment

value: after C/EBP Beta knockdown


title: SC-siSnrpd2


title: RM 13 ip53 -D Rep1


title: hEGC_A4


title: RM 10 ip53 +D Rep3

value: Monosomy Chr. 10 and 18


title: C13* shCEBPB cell line7

description:
R-7
Processed data file: fpkm.txt


title: RM 13 ip53 +D Rep3


title: SC-siNC


title: SC-E14-5-placenta-yolk


title: hEGC_A5_rep2


title: RM 10 ip53 +D Rep2


title: C13* shCEBPB cell line6

description:
R-6
Processed data file: fpkm.txt


title: H1299-4sU-4h

data_processing:
Library strategy: 4sU-seq
For PolyA(+) RNA-seq, Trimmomatic software was used to trim the adapters. Hisat2 software was used for the alignment to the mm10 reference genome with default parameters. For 4sU-seq data, All reads were trimmed by Trimmomatic. The reads which were not aligned to the mm10 repeats or BK000964.3 (rRNA) sequence were used to mapped to the mm10 reference genome with the same commands in PolyA(+) RNA-seq analysis. The ATAC-seq data were processed using ATAC-seq pipeline from Kundaje lab, including trimming, alignment, filtration and quality control.
The expression count matrix was obtained by FeatureCounts.
Data were normalized by total mapped reads of each library (CPM: count per million).
Genome_build: mm10

extract_protocol:
DNA and RNA extracted according to the manufacturer’s instructions.
RNA-seq libraries preparation using the TruSeq Stranded mRNA Sample Prep Kits (Illumina). 4sU-seq libraries preparation using TruSeq Stranded Total RNA Sample Prep Kits (Illumina). ATAC-seq Library Preparation is according to insructions of Corces et al. Nature Methods 2017.

value: H1299 cultured in DMEM + 50 nM PlaB medium


title: hEGC_A5_rep1


title: C13* shCEBPB cell line5

description:
R-5
Processed data file: fpkm.txt


title: RM 10 ip53 +D Rep1

value: RPE1 immortalized with hTERT


title: C13* shCEBPB cell line4

description:
R-4
Processed data file: fpkm.txt


title: hiPSC_F2

source_name: human iPSC

value: human iPSC


title: H1299-4sU-0h

value: WT


title: H1299-4sU-1h


title: RM 10 ip53 -D Rep3

value: Cells lines with inducible p53


title: meCLIP_MDAMB231_HOTAIR_A783U_rep1_INPUT

description: cDNA

value: overexpressing lncRNA HOTAIR


title: RM 10 ip53 -D Rep2


title: TC1-EGFP 4sU-10nM-4h

value: mESC cultured in serum/lif + 10 nM PlaB medium


title: TC1-EGFP 4sU-10nM-1h


title: C13* shCEBPB cell line2

description:
R-2
Processed data file: fpkm.txt


title: RM 10 ip53 -D Rep1


title: C13* shCEBPB cell line3

description:
R-3
Processed data file: fpkm.txt


title: C13* shCEBPB cell line1

description:
R-1
Processed data file: fpkm.txt


title: RPE1 ip53 +D Rep3

value: with doxycycline

value: Diploid


title: hiPSC_A5_rep1

value: male


title: TC1-EGFP 4sU-10nM-0h


title: RNA_D16_ZIC3-rep2

city: 广州

first: yu

last: liu

address: :广州市黄埔区开源大道188号3栋

institute: 生物岛实验室

data_processing:
RNA-seq was processed as described in (Hutchins et al., 2017), briefly reads were using aligned to a transcriptome index generated from the Ensembl annotations (v99), using RSEM (Li and Dewey, 2011), bowtie2 (Langmead and Salzberg, 2012).
Genome_build: hg38
Supplementary_files_format_and_content: peak file, based on this threshold value of 0.2734 if the ATAC- seq is below this value it is annotated as ‘closed’ and above ‘open’.
Supplementary_files_format_and_content: raw counts file,RSEM was used to match the reads to HG38 genome.

source_name: Cells produced on day 16 after reprogramming urine cells

growth_protocol: UCs were cultured in RM medium consisting of REBM medium containing REGM: DMEM/high glucose containing NEAA, glutaMAX-1 and 10%FBS=1:1. UiPSCs and hESCs were cultured in mTeSR1.

extract_protocol:
ATAC-seq:A total of 50,000 cells were washed once with cold PBS and resuspended in 50ul lysis buffer. The suspension of nuclei was then centrifuged for 10 min at 500g at 4°C, followed by the addition of 50 μl transposition reaction mix (25 μl TD buffer, 2.5 μl Tn5 transposase and 22.5 μl nuclease-free H2O) of Nextera DNA library Preparation Kit (96 samples) (FC-121-1031, Illumina), and incubated at 37°C for 30min. DNA was isolated using a MinElute Kit (Qiagen). RNA-seq:Total mRNA from hUCs, iPSCs, and ESCs was harvested using Trizol reagent. VAHTSTM mRNA-seq V3 Library Prep Kit for Illumina® (Vazyme) was used with 1 ug of total RNA for the construction of sequencing libraries.
ATAC-seq libraries were first subjected to 5 cycles of pre-amplification. To determine the suitable number of cycles required for the second round of PCR the library was assessed by quantitative PCR as described5, and the library was then PCR amplified for the appropriate number of cycles. Libraries were purified with a Qiaquick PCR (Qiagen) column. Library concentration was measured using a KAPA Library Quantification kits (KK4824) according to the manufacturers instructions. Library integrity was checked by gel electrophoresis. Finally, the ATAC library was sequenced on a NextSeq 500 using a NextSeq 500 High Output Kit v2 (150 cycles) (FC-404-2002, Illumina) according to the manufacturers instructions. RNA library was checked by gel electrophoresis,then sequenced on a NextSeq 500 using a NextSeq 500 High Output Kit v2 (150 cycles) (FC-404-2002, Illumina) according to the manufacturers instructions.

treatment_protocol: UCs (5 × 105 to 1 × 106) were digested to single cells and electroporated with indicated episomal plasmids using an Amaxa Basic Nucleofector Kit for primary mammalian epithelial cells, program T-020 . The electroporated UCs were seeded onto matrigel pre-coated P6 wells, In each nucleofection, 3 μg of pEP4EO2SET2Kand 2 μg of pCEP4-miR-302-367 clusteror 1.8 μg of pEP4EO2SET2K, 1.2 μg of pCEP4-miR-302-367 cluster and 2.0ug of pCEP4-TEAD2/ pCEP4-TEAD4/ pCEP4-ZIC3 were used. The concentration of SMs was shown as follows: 0.5 μM A-83-01 , 3 μM CHIR99021 , 0.5 μM Tzv, 250 μM sodium butyrate, 0.3 μM cyclic pifithrin-a , and 0.5 μM PD0325901. Reprogramming medium was RM at days 0–1, RM + 5M at days 2–9, and mTeSR1 + 6M at days 10–16. Each medium was changed every other day. .


title: RPE1 ip53 +D Rep1


title: TC1-EGFP 10nM-6h RNA-seq

data_processing:
For PolyA(+) RNA-seq, Trimmomatic software was used to trim the adapters. Hisat2 software was used for the alignment to the mm10 reference genome with default parameters. For 4sU-seq data, All reads were trimmed by Trimmomatic. The reads which were not aligned to the mm10 repeats or BK000964.3 (rRNA) sequence were used to mapped to the mm10 reference genome with the same commands in PolyA(+) RNA-seq analysis. The ATAC-seq data were processed using ATAC-seq pipeline from Kundaje lab, including trimming, alignment, filtration and quality control.
The expression count matrix was obtained by FeatureCounts.
Data were normalized by total mapped reads of each library (CPM: count per million).
Genome_build: mm10


title: RPE1 ip53 +D Rep2


title: TC1-EGFP 10nM-4h RNA-seq


title: RNA_D16_ZIC3-rep1

address: :广州市黄埔区开源大道188号3栋

value: Cells produced on day 16 after reprogramming urine cells


title: C13* shCON cell line rep7

description:
CS-8
Processed data file: fpkm.txt

value: before C/EBP Beta knockdown


title: RNA_D16_TEAD4-rep2

address: :广州市黄埔区开源大道188号3栋


title: C13* shCON cell line rep6

description:
CS-7
Processed data file: fpkm.txt


title: TC1-EGFP 10nM-2h RNA-seq


title: C13* shCON cell line rep5

description:
CS-5
Processed data file: fpkm.txt


title: RNA_D16_TEAD4-rep1

address: :广州市黄埔区开源大道188号3栋


title: TC1-EGFP 10nM-1h RNA-seq


title: RPE1 ip53 -D Rep3

value: No doxycycline


title: RPE1 ip53 -D Rep2


title: RNA_D16_TEAD2-rep2

address: :广州市黄埔区开源大道188号3栋


title: C13* shCON cell line rep3

description:
CS-3
Processed data file: fpkm.txt


title: hiPSC_A5_rep2


title: TC1-EGFP TBLC_P6_r2 RNA-seq

value: mESC cultured in serum/lif medium


title: C13* shCON cell line rep4

description:
CS-4
Processed data file: fpkm.txt

value: adenocarcinoma


title: hiPSC_A4


title: RM 19p Rep3

value: p53 knockdown shRNA TP53

value: Monosomy Chr 19p


title: RNA_D16_TEAD2-rep1

address: :广州市黄埔区开源大道188号3栋


title: RPE1 ip53 -D Rep1


title: TC1-EGFP TBLC_P6 RNA-seq

value: mESC cultured in SLP medium


title: TC1-EGFP TBLC_P6_r1 RNA-seq


title: C13* shCON cell line rep1

description:
CS-1
Processed data file: fpkm.txt


title: RM 19p Rep2

value: RPE1 immortalized with hTERT


title: C13* shCON cell line rep2

description:
CS-2
Processed data file: fpkm.txt


title: RNA_D16_GFP-rep1

address: :广州市黄埔区开源大道188号3栋


title: RNA_D16_GFP-rep2

address: :广州市黄埔区开源大道188号3栋


title: RM 19p Rep1


title: TC1-EGFP P7 RNA-seq


title: A2780 parent line rep7

description:
O-7
Processed data file: fpkm.txt

value: untreated


title: RNA_UipsZIC3-rep4-P9

address: :广州市黄埔区开源大道188号3栋

source_name: Induced pluripotent stem cells

value: Induced pluripotent stem cells


title: RPE1 p53 KD Rep2


title: RPE1 p53 KD Rep3


title: RNA_UipsZIC3-rep3-P9

address: :广州市黄埔区开源大道188号3栋


title: A2780 parent line rep6

description:
O-6
Processed data file: fpkm.txt


title: RNA_UipsZIC3-rep2-P13

address: :广州市黄埔区开源大道188号3栋


title: TC1-EGFP P4 RNA-seq


title: RPE1 p53 KD Rep1


title: A2780 parent line rep5

description:
O-5
Processed data file: fpkm.txt


title: RNA_UipsZIC3-rep1-P6

address: :广州市黄埔区开源大道188号3栋


title: A2780 parent line rep4

description:
O-4
Processed data file: fpkm.txt


title: TC1-EGFP P2 RNA-seq


title: RNA_UipsTEAD4-rep3-P11

address: :广州市黄埔区开源大道188号3栋


title: RM 13 Rep3

value: p53 knockout

value: Monosomy Chr. 13


title: A2780 parent line rep3

description:
O-3
Processed data file: fpkm.txt


title: TC1-EGFP P1 RNA-seq


title: RM 13 Rep1


title: RNA_UipsTEAD4-rep2-P13

address: :广州市黄埔区开源大道188号3栋


title: A2780 parent line rep8

description:
O-8
Processed data file: fpkm.txt


title: A2780 parent line rep1

description:
O-1
Processed data file: fpkm.txt


title: RM 10;18 Rep3

value: Monosomy Chr. 10 and 18


title: TC1-EGFP P6 RNA-seq


title: TC1-EGFP P10 RNA-seq


title: TC1-EGFP P5 RNA-seq


title: A2780 Olaparib-resistant cell line rep8

description:
C-8
Processed data file: fpkm.txt

value: treated with Olaparib


title: RNA_UipsTEAD2-rep2-P12

address: :广州市黄埔区开源大道188号3栋


title: RM 10;18 Rep2


title: TC1-EGFP P0 RNA-seq


title: A2780 Olaparib-resistant cell line rep7

description:
C-7
Processed data file: fpkm.txt


title: RNA_UipsTEAD2-rep1-P8

address: :广州市黄埔区开源大道188号3栋


title: RNA_Uips-rep4-P11

address: :广州市黄埔区开源大道188号3栋


title: A2780 Olaparib-resistant cell line rep6

description:
C-6
Processed data file: fpkm.txt


title: TC1-siSnrpd2-2 RNA-seq


title: RM 10;18 Rep1


title: TC1-siSnrpd2-1 RNA-seq


title: RNA_Uips-rep3-P17

address: :广州市黄埔区开源大道188号3栋


title: TC1-siSnrpb-2 RNA-seq


title: A2780 Olaparib-resistant cell line rep5

description:
C-5
Processed data file: fpkm.txt


title: RNA_Uips-rep2-P16

address: :广州市黄埔区开源大道188号3栋


title: A2780 parent line rep2

description:
O-2
Processed data file: fpkm.txt


title: TC1-EGFP P15 RNA-seq


title: RNA_UipsTEAD4-rep1-P8

address: :广州市黄埔区开源大道188号3栋


title: A2780 Olaparib-resistant cell line rep4

description:
C-4
Processed data file: fpkm.txt


title: RM 13 Rep2


title: RPE1 p53KO Rep2

value: Diploid


title: RPE1 p53KO Rep1


title: TC1-siSnrpb-1 RNA-seq


title: A2780 Olaparib-resistant cell line rep3

description:
C-3
Processed data file: fpkm.txt


title: RNA_Uips-rep1-P18

address: :广州市黄埔区开源大道188号3栋


title: TC1-siNC-2 RNA-seq


title: A2780 Olaparib-resistant cell line rep2

description:
C-2
Processed data file: fpkm.txt


title: TC1-siNC-1 RNA-seq


title: RNA_UC_rep1

address: :广州市黄埔区开源大道188号3栋

source_name: human urine cell

value: human urine cell


title: RNA_UC_rep2

address: :广州市黄埔区开源大道188号3栋


title: A2780 Olaparib-resistant cell line rep1

description:
C-1
Processed data file: fpkm.txt


title: RPE1 p53KO Rep3


title: TC1-siLsm4-2 RNA-seq


title: TC1-siLsm4-1 RNA-seq


title: RNA_H1ES-rep2

address: :广州市黄埔区开源大道188号3栋

source_name: hESC

value: hESC


title: ATAC_UC_rep2

address: :广州市黄埔区开源大道188号3栋

library_source: genomic

molecule: genomic DNA


title: TC1-siIsy1-1 RNA-seq


title: RNA_H1ES-rep1

address: :广州市黄埔区开源大道188号3栋


title: ATAC_H1ES_rep2

address: :广州市黄埔区开源大道188号3栋


title: ATAC_UC_rep1

address: :广州市黄埔区开源大道188号3栋


title: TC1-siEftud2-1 RNA-seq


title: ATAC_H1ES_rep1

address: :广州市黄埔区开源大道188号3栋


title: 9DPA fiber GhWRKY16-RNAi rep6

status: Public on May 14 2021

city: Wuhan

first: Yang

last: Li

address: NO.152 Luoyu Road

department: School of Life Science

institute: central china normal university

data_processing:
FastQC software (Fastp V0.20) used for basecalling.
Raw data (raw reads) of fastq format were firstly processed through in-house perl scripts. In this step, clean data (clean reads) were obtained by removing reads containing adapter, reads containing ploy-N and low quality reads from raw data. At the same time, Q20, Q30 and GC content the clean data were calculated.
Hisat2 was selected as the mapping tool. The number of perfect clean tags for each gene was calculated and then normalized in fragments per kilo bases per million mapped Reads (FPKM) using the described method.
Differential expression analysis of two conditions/groups (three biological replicates per condition) was performed using the DESeq R package (1.10.1). DESeq provide statistical routines for determining differential expression in digital gene expression data using a model based on the negative binomial distribution. The resulting P-values were adjusted using the Benjamini and Hochberg’s approach for controlling the false discovery rate. Genes with an adjusted P-value <0.05 found by DESeq were assigned as differentially expressed.
Genome_build: TM1

organism: Gossypium hirsutum

source_name: 9 DPA fiber

growth_protocol: All plants grown in field

extract_protocol:
Total RNA extracted  from  9 DPA fibers by using RNAprep Pure Polysaccharide Polyphenol Plant Total RNA Extraction Kit (Tiangen, China)
RNA libraries were prepared for sequencing using standard Illumina protocols

value: fiber

value: GhWRKY16 RNAi

tag: developmental stage

value: 9 DPA


title: 9DPA fiber GhWRKY16-RNAi rep5


title: 9DPA fiber GhWRKY16-RNAi rep4


title: 9DPA fiber GhWRKY16-RNAi rep3


title: TC1-siIsy1-2 RNA-seq

value: mESC cultured in serum/lif medium


title: 9DPA fiber GhWRKY16-RNAi rep2


title: 9DPA fiber GhWRKY16-RNAi rep1


title: TC1-siEftud2-2 RNA-seq


title: 9DPA fiber WT rep3

value: wild type


title: 9DPA fiber WT rep2


title: Sulforaphane treated, rep2

type: RNA

city: Jinan

first: Fengying

last: Du

state: China

address: jingwuweiqi street, 324

institute: Shandong Provincial Hospital

description: Gene expression data from SW480 cultured with sulforaphane

hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GN-GeneChip Clariom S Array ，human. GeneChips were washed and stained in the GeneChip Fluidics Station 450.

scan_protocol: GeneChips were scanned using the GeneChip Scanner 3000.

data_processing: The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.

label: biotin

source_name: SW480 cultured with sulforaphane

label_protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

growth_protocol: SW480 cultured in DMEM/high glucose medium containing 10% fetal bovine serum at 37˚C in a 5% CO2 incubator.

extract_protocol: Following 48 h of drug incubation, total RNA was extracted using TRIzol® reagent.

treatment_protocol: Sulforaphane and sulforaphene were solubilized in double-distilled water and diluted to 25 μmol/l in culture medium. Drug treatment was performed at 25 μmol/l and an equivalent volume of double distilled water was added to the blank control group.

tag: strain

tag: disease state

value: colon cancer

value: sulforaphane


title: 9DPA fiber WT rep1


title: Control, rep3

description: Gene expression data from SW480 cultured with double distilled water

value: double distilled water


title: Sulforaphane treated, rep1


title: Sulforaphene treated, rep3

description: Gene expression data from SW480 cultured with sulforaphene

source_name: SW480 cultured with sulforaphene

value: sulforaphene


title: Sulforaphane treated, rep3


title: basilar artery, Ligation

city: Hirosaki

first: Toshio

last: Fumoto

state: Aomori

address: 5 Zaifu-cho

department: Department of Neurosurgery

country: Japan

institute: Hirosaki University Graduate School of Medicine

description: Gene expression data in basilar artery after bilateral common carotid artery ligation.

hyb_protocol: DNAs were hybridized for 16 hr at 45 °C on Clariom S assay using GeneChip Hybridization Oven 645. Arrays were washed in the Affymetrix Fluidics Station 450.

scan_protocol: Arrays were scanned using GeneChip Scanner 3000 7G.

data_processing: Data acquisition and normalization (SST-RMA) were used Affymetrix Expression Console Software.

organism: Rattus norvegicus

source_name: basilar artery after bilateral CCAs ligation

label_protocol: Fragmented and labeled cDNAs were prepared from 50ng total RNA using GeneChip WT PLUS reagents kit.

extract_protocol: Total RNA was extracted using TRIzol reagent and Pure Link RNA Micro Kit according to the manufacturer's instructions.

treatment_protocol: Under deep anesthesia, both common carotid arteries (CCAs) were exposed via a midline cervical incision and ligated with suture. For the sham operation, the CCAs were exposed without ligation.

tag: gender

value: Male

value: Sprague-Dawley

value: basilar artery

tag: age


title: Control, rep1

source_name: SW480 cultured with double distilled water


title: basilar artery, Sham

description: Gene expression data in basilar artery after Sham operation.

source_name: basilar artery after Sham operation


title: 5163: Abdominal Aorta, AngII+GAS

city: Fuzhou

first: Jun

last: Peng

state: Fujian

address: 1 Qiuyang Road, Minhou Shangjie

department: Academy of Integrative Medicine

institute: Fujian University of Traditional Chinese Medicine

description: WT mice with 28-day Angiotensin-II (500ng/kg/min) and GAS (5mg/kg/d) treatment

data_processing:
Data were filtered using the following specifications fastq software. The filtering standards from raw data to clean reads are:
Check the sample for contamination and, if there is pollution, remove it
If the reads contains a joint sequence, the joint sequence is cut off first
a base having an average base mass of less than 15 on both ends of the readth window is cut with four base lengths as a sliding window;
Remove the number of threads with a high N content. If the N content in a read is more than 5%, the whole read is removed, and the read pair with high low-quality base content is removed. If the low-quality base in one read (the mass value is not higher than the base of 20) exceeds 30%, the whole pair of the reads is removed;
if the truncated read length is less than 50 bp, the entire read is removed
Remove unmatched reads
Q30, Q20 explanation:
Q30 indicates that the sequencing error rate of the base is 0.1%.
Q20 indicates that the sequencing error rate of the base is 1%.
Using String Tie for readcount and FPKM calculation.
Differential expression analyses were performed using the limma package.
Genome_build: GCRmm38/mm10(UCSC)
Supplementary_files_format_and_content: tab_delimited text files include FPKM values for each Sample

source_name: abdominal aorta

growth_protocol: The abdominal aorta were dissected and  stored in liquid nitrogen and stored in low temperature.Total RNA was extracted with mirVana miRNA Isolation Kit (Cat. AM1560, Ambion, Austin, USA). RNA integrity was assessed with an Agilent 2100 Bioanalyzer (Agilent Technologies, Santa Clara, CA, USA) and RNA concentration was measured by Qubit RNA Assay Kit in a Qubit Fluorometer (Invitrogen, CA, USA).

extract_protocol: A total amount of 1 μg RNA per sample was used. In brief, the NEBNext rRNA Depletion Kit was used to remove rRNA from the total RNA. The NEB Next Ultra RNA Library Prep Kit for Illumina (NEB, Beijing, China) was used to construct the libraries for sequencing following the manufacturer’s instructions.

value: abdominal aorta

tag: genotype

value: WT

value: Angiotensin-II

value: Gastrodin

tag: group

value: AngII+GAS


title: 5148: Abdominal Aorta, AngII+VAL

description: WT mice with 28-day Angiotensin-II (500ng/kg/min) and VAL (10.4mg/kg/d) treatment

value: Valsartan

value: AngII+VAL


title: 5121: Abdominal Aorta, AngII+VAL


title: 5131: Abdominal Aorta, AngII+VAL


title: 5124: Abdominal Aorta, AngII+VAL


title: 5194: Abdominal Aorta, AngII+VAL


title: 5120: Abdominal Aorta, AngII+GAS


title: 5158: Abdominal Aorta, AngII+GAS


title: 5140: Abdominal Aorta, AngII+BAI

description: WT mice with 28-day Angiotensin-II (500ng/kg/min) and BAI (5mg/kg/d) treatment

value: Baicalin

value: AngII+BAI


title: 5133: Abdominal Aorta, AngII+BAI


title: 5135: Abdominal Aorta, AngII+GAS


title: Sulforaphene treated, rep1


title: Control, rep2


title: 5113: Abdominal Aorta, AngII+BAI


title: 5154: Abdominal Aorta, AngII+BAI


title: 5125: Abdominal Aorta, AngII+ETH

description: WT mice with 28-day Angiotensin-II (500ng/kg/min) and ETH (5mg/kg/d) treatment

value: Ethoxysanguinarine

value: AngII+ETH


title: 5138: Abdominal Aorta, AngII+BAI


title: 5123: Abdominal Aorta, AngII+ETH


title: Sulforaphene treated, rep2

value: colon cancer


title: 5112: Abdominal Aorta, AngII+GAS


title: 5164: Abdominal Aorta, AngII+ETH


title: 5118: Abdominal Aorta, AngII+ETH


title: 5145: Abdominal Aorta, AngII

description: WT mice with 28-day Angiotensin-II (500ng/kg/min) treatment

value: Saline

value: AngII


title: 5141: Abdominal Aorta, AngII+ETH


title: 5161: Abdominal Aorta, AngII


title: 5130: Abdominal Aorta, AngII


title: 5143: Abdominal Aorta, AngII


title: 5117: Abdominal Aorta, Control

description: WT mice with 28-day Saline treatment

value: Control


title: 5116: Abdominal Aorta, Control

description: WT mice with 28-day Saline treatment


title: 5114: Abdominal Aorta, Control

description: WT mice with 28-day Saline treatment


title: 5128: Abdominal Aorta, AngII


title: Genomic DNA from 9996247201_R01C01

type: genomic

city: Research Triangle Park

first: Zongli

last: xu

state: NC

address: 111 TW Alexander Dr

department: Epidemiology Branch

institute: NIEHS

hyb_protocol: bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol

scan_protocol: Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting

data_processing:
Enmix background correction, RELIC dye bias correction, quantile normalization and RCP probe type adjustment
Average methylation beta value in Series matrix table

label: Cy3 and Cy5

label_protocol: Standard Illumina Protocol

growth_protocol: Whole blood sample was stored in liquid nitrogen

extract_protocol: Genomic DNA was extracted from aliquots of whole blood using an automated system (Autopure LS, Gentra Systems)

treatment_protocol: One microgram of DNA from each woman was bisulfite-converted in 96-well plates using the EZ DNA Methylation Kit (Zymo Research, Orange County CA)

value: Female

value: Whole blood


title: Genomic DNA from 9996247200_R04C02


title: R255K-RIP-2

city: Guangzhou

first: Shan

last: Xiao

address: Southern Shatai Road

department: Developmental Biology

institute: Southern Medical University

data_processing:
Reads that mapped to rRNA fasta sequences from the UCSC gene annotation (mm10) using bowtie2 (v.2.2.6) 11 were discarded, and remaining reads were aligned to mm10 using hisat2-align-s (v.2.0.5) 12. Unique reads with high mapping quality were retained using Picard (http://broadinstitute.github.io/picard, v.2.16.0) and SAMtools (v.0.1.09)13.
Regions of significant meRIP enrichment relative to input control (“peaks”) were identified using MACS216. The parameter ‘--nomodel’ was used for macs2 peak calling. Macs2 bdgdiff was used to identify differential peaks.
Genome_build: mm10
Supplementary_files_format_and_content: bed

source_name: E14Tg2a cells

growth_protocol: E14Tg2a murine embryonic stem cells (mESCs) were cultured in high-glucose DMEM (Invitrogen, 12430) supplemented with 15% fetal bovine serum (FBS, Biological Industries, 04-002-1A), 1% non-essential amino acid (Invitrogen, 11140050), 1 mM glutamine (Invitrogen, 35050061), 0.15 mM 1-thioglycerol (Sigma-Aldrich, M6145), 100 U/mL Penicillin/Streptomycin (Invitrogen,15140122) and 1000 U/mL LIF (Millipore, ESG1107) at 37 °C with 5% CO2. Cells were maintained in plates coated with 0.2% gelatin (Sigma-Aldrich, V900863).

extract_protocol:
Total RNA was extracted and fragmented into ~100-nucleotide fragments with zinc acetate and 300 μg fragmented RNA was prepared for immunoprecipitation with m6A antibodies (Abcam, ab151230). Nonspecific bindings were washed away with an astringent workflow: high-salt buffer (400 mM NaCl, 0.05% NP-40, 10 mM Tris-HCl), competitive buffer (150 mM NaCl, 0.05% NP-40, 10 mM Tris-HCl, 0.25 mg/mL adenosine, uridine, guanosine and cytidine mix), high-detergent buffer (150 mM NaCl, 0.5% NP-40, 10 mM Tris-HCl), and immunoprecipitation buffer (150 mM NaCl, 0.05% NP-40, 10 mM Tris-HCl). Bound m6A RNA was eluted by competition with 1 mg/mL N6-methyladenosine (Selleckchem, S3190). For input RNA, ribosomal RNA was removed with Epicentre Ribo-zero rRNA removal kits (Epicentre).
Library construction of immunoprecipitated RNAs and input RNAs was conducted by NEBNext Ultra RNA Library Prep Kits for Illumina (New England Biolabs) on an Illumina Hiseq Xten platform.

value: E14Tg2a cells

value: METTL14 R255K

tag: rip antibody


title: E14-input-2

value: WT


title: E14-RIP-2


title: R255K-input-2


title: E14-RIP-1


title: E14-input-1


title: R255K-RIP-1


title: Genomic DNA from 9996247199_R04C01


title: Genomic DNA from 9996247198_R05C02


title: Genomic DNA from 9996247194_R05C01


title: Genomic DNA from 9996247196_R02C01


title: Genomic DNA from 9996247192_R05C02


title: Genomic DNA from 9996247190_R02C01


title: Genomic DNA from 9996247191_R05C01


title: 5155: Abdominal Aorta, Control

description: WT mice with 28-day Saline treatment

value: abdominal aorta


title: 5193: Abdominal Aorta, Control

description: WT mice with 28-day Saline treatment


title: Genomic DNA from 9996247189_R02C01


title: Genomic DNA from 9996247187_R01C01


title: Genomic DNA from 9996247188_R04C01


title: Genomic DNA from 9996247185_R01C02


title: Genomic DNA from 9996247179_R05C02


title: Genomic DNA from 9996247184_R02C01


title: Genomic DNA from 9996247176_R02C01


title: Genomic DNA from 9996247165_R05C02


title: Genomic DNA from 9996247177_R02C01


title: Genomic DNA from 9996247174_R01C01


title: Genomic DNA from 9996247164_R02C02


title: Genomic DNA from 9996247160_R06C01


title: Genomic DNA from 9996247175_R06C02


title: Genomic DNA from 9996247162_R06C01


title: Genomic DNA from 9996247163_R03C02


title: Genomic DNA from 9996247158_R03C02


title: Genomic DNA from 9996247159_R05C02


title: Genomic DNA from 9996247150_R02C01


title: Genomic DNA from 9996247148_R04C01


title: Genomic DNA from 9996247144_R06C02


title: Genomic DNA from 9996247145_R05C01


title: Genomic DNA from 9996247140_R06C01


title: Genomic DNA from 9996247141_R04C02


title: methylation_PBMCs-IgAN-Pair1

first: min

last: wei

address: No 8, Xishiku Street

institute: perking university First Hospital

description:
blood collected 3 years after diagnosis of the IgAN patient
ZJW

hyb_protocol: bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium MethylationEPIC Beadchip using standard Illumina protocol

data_processing: The raw intensity files were imported into R using minfi packages. A β-value was calculated for each CpG site, which falls between 0 and 1 and indicates the level of methylation (0 refers to unmethylated status, 1 refers to fully methylated status). R package minfi, wateRmelon and DMRcate were used for quality control and data preprocessing. Samples with mean detection p-value >0.01 or bisulfite conversion rate lower than 95% were considered unqualified. Normalization of the data was conducted using the preprocessQuantile() function in minfi. The probes met the following criteria were filtered out: 1) the probes with detection p-value>0.01 or low bead count (<3 beads) in one or more samples; 2) non-CpG probes; 3) cross-reactive probes; 4) probes that measure SNPs and 5) probes on the sex chromosomes.

label: Cy5 and Cy3

source_name: PBMCs

extract_protocol: Whole blood was collected in sterile vacutainer tubes containing the anticoagulant EDTA and PBMCs were isolated by means of density gradient centrifugation.Then genomic DNA was extracted using a salting out method. The quality and quantity of DNA was assessed using NanoDrop ND-2000 (Thermo Scientific, Wilmington, DE, United States).

value: PBMCs

tag: patient diagnosis

value: IgA nephropathy

value: male


title: Genomic DNA from 9996247170_R02C02


title: Genomic DNA from 9996247167_R01C01


title: R255K-input-1


title: methylation_PBMCs-IgAN-Pair2

description:
blood collected 16 years after diagnosis of the IgAN patient
MJ

value: female


title: Genomic DNA from 9996247139_R01C02


title: methylation_PBMCs-HC-Pair1

description:
blood collected 3 years after diagnosis of the IgAN patient
JGD

value: healthy


title: Genomic DNA from 9996247156_R03C02


title: Genomic DNA from 9996247134_R06C01


title: Genomic DNA from 9996247135_R02C01


title: Genomic DNA from 9996247133_R04C01


title: Genomic DNA from 9996247124_R04C02


title: Genomic DNA from 9996247131_R02C01


title: Genomic DNA from 9996247127_R02C01


title: methylation_PBMCs-HC-Pair2

description:
blood collected 16 years after diagnosis of the IgAN patient
MJJJ


title: Genomic DNA from 9996247132_R04C02


title: Genomic DNA from 9996247107_R02C01


title: Genomic DNA from 9996247112_R04C02


title: Genomic DNA from 9996247099_R01C02


title: Genomic DNA from 9996247105_R01C02


title: Genomic DNA from 9996247096_R02C01


title: Genomic DNA from 9996247092_R02C01


title: Genomic DNA from 9996247093_R06C01


title: Genomic DNA from 9996247090_R02C01


title: Genomic DNA from 9996247097_R02C01


title: Genomic DNA from 9996247098_R02C01


title: Genomic DNA from 9996247095_R01C02


title: Genomic DNA from 9996247102_R02C01


title: Genomic DNA from 9996247088_R01C01


title: Genomic DNA from 9996247087_R02C01


title: Genomic DNA from 9996247089_R02C01


title: Genomic DNA from 9996247085_R02C01


title: Genomic DNA from 9996247081_R05C02


title: Genomic DNA from 9996247083_R02C01


title: Genomic DNA from 9996247080_R06C01


title: Genomic DNA from 9996247077_R06C01


title: Genomic DNA from 9996247076_R06C01


title: Genomic DNA from 9996247128_R06C02


title: Genomic DNA from 9996247065_R02C01


title: Genomic DNA from 9996247064_R02C01


title: Genomic DNA from 9996247062_R06C01


title: Genomic DNA from 9996247048_R02C01


title: Genomic DNA from 9996247052_R01C02


title: Genomic DNA from 9996247042_R01C01


title: Genomic DNA from 9996247057_R06C01


title: Genomic DNA from 9996247043_R04C01


title: Genomic DNA from 9996247039_R03C02


title: Genomic DNA from 9996247041_R06C01


title: Genomic DNA from 9996247037_R06C02


title: Genomic DNA from 9996247031_R05C01


title: Genomic DNA from 9996247036_R03C02


title: Genomic DNA from 9996247020_R05C01


title: Genomic DNA from 9996247026_R02C01


title: Genomic DNA from 9996247021_R02C01


title: Genomic DNA from 9996247017_R02C02


title: Genomic DNA from 9996247019_R06C01


title: Genomic DNA from 9996247084_R02C01


title: Genomic DNA from 9996247070_R02C02


title: Genomic DNA from 9996247015_R02C02


title: Genomic DNA from 9996247011_R02C01


title: Genomic DNA from 9996247010_R05C02


title: Genomic DNA from 9996247009_R04C01


title: Genomic DNA from 9996247068_R06C01


title: Genomic DNA from 9996247008_R06C01


title: Genomic DNA from 9996247005_R02C01


title: Genomic DNA from 9996247004_R05C01


title: Genomic DNA from 9996247007_R04C02


title: Genomic DNA from 9994014209_R01C02


title: Genomic DNA from 9994014204_R06C01


title: Genomic DNA from 9994014201_R03C02


title: Genomic DNA from 9996247033_R06C01


title: Genomic DNA from 9996247035_R04C01


title: Genomic DNA from 9994014196_R01C01


title: Genomic DNA from 9994014193_R06C01


title: Genomic DNA from 9994014186_R05C02


title: Genomic DNA from 9996247032_R02C01


title: Genomic DNA from 9994014184_R02C02


title: Genomic DNA from 9994014185_R01C01


title: Genomic DNA from 9994014183_R02C01


title: Genomic DNA from 9994014174_R01C01


title: Genomic DNA from 9994014179_R05C01


title: Genomic DNA from 9996247012_R06C02


title: Genomic DNA from 9994014170_R06C01


title: Genomic DNA from 9994014162_R06C01


title: Genomic DNA from 9994014163_R04C02


title: Genomic DNA from 9994014168_R06C01


title: Genomic DNA from 9994014160_R04C01


title: Genomic DNA from 9994014164_R01C01


title: Genomic DNA from 9994014153_R02C01


title: Genomic DNA from 9996247006_R04C01


title: Genomic DNA from 9996247001_R06C02


title: Genomic DNA from 9994014199_R05C02


title: Genomic DNA from 9994014148_R02C01


title: Genomic DNA from 9994014149_R02C01


title: Genomic DNA from 9994014146_R03C02


title: Genomic DNA from 9994014142_R01C01


title: Genomic DNA from 9994014194_R06C02


title: Genomic DNA from 9994014152_R04C01


title: Genomic DNA from 9994014147_R04C01


title: Genomic DNA from 9994014141_R02C01


title: Genomic DNA from 9994014133_R02C02


title: Genomic DNA from 9994014140_R05C02


title: Genomic DNA from 9994014120_R05C01


title: Genomic DNA from 9994014118_R06C01


title: Genomic DNA from 9994014124_R05C02


title: Genomic DNA from 9994014125_R06C01


title: Genomic DNA from 9994014132_R03C02


title: Genomic DNA from 9994014134_R06C01


title: Genomic DNA from 9994014116_R06C01


title: Genomic DNA from 9994014117_R06C01


title: Genomic DNA from 9994014111_R05C02


title: Genomic DNA from 9994014112_R02C01


title: Genomic DNA from 9994014102_R02C01


title: Genomic DNA from 9994014115_R03C01


title: Genomic DNA from 9994014114_R02C01


title: Genomic DNA from 9994014099_R03C02


title: Genomic DNA from 9994014097_R01C02


title: Genomic DNA from 9994014070_R01C01


title: Genomic DNA from 9994014059_R05C01


title: Genomic DNA from 9994014048_R06C01


title: Genomic DNA from 9994014058_R06C02


title: Genomic DNA from 9994014042_R03C01


title: Genomic DNA from 9994014030_R06C02


title: Genomic DNA from 9994014017_R02C01


title: Genomic DNA from 9994014025_R01C01


title: Genomic DNA from 9994014021_R02C01


title: Genomic DNA from 9994014015_R04C02


title: Genomic DNA from 9994014136_R04C02


title: Genomic DNA from 9994014013_R06C01


title: Genomic DNA from 9994014014_R03C02


title: Genomic DNA from 9994014003_R03C02


title: Genomic DNA from 9993943108_R06C01


title: Genomic DNA from 9993943067_R04C02


title: Genomic DNA from 9993943093_R01C01


title: Genomic DNA from 9994014001_R04C01


title: Genomic DNA from 9993943057_R03C02


title: Genomic DNA from 9993943034_R06C02


title: Genomic DNA from 9993943007_R03C01


title: Genomic DNA from 9993943018_R06C02


title: Genomic DNA from 9993943025_R05C01


title: Genomic DNA from 9993943006_R06C02


title: Genomic DNA from 9993943023_R06C01


title: Genomic DNA from 3999997155_R06C01


title: Genomic DNA from 9993943036_R03C02


title: Genomic DNA from 3999997145_R03C02


title: Genomic DNA from 9994014045_R02C02


title: Genomic DNA from 3999997154_R06C01


title: Genomic DNA from 3999997144_R03C02


title: Genomic DNA from 3999997125_R03C01


title: Genomic DNA from 3999997121_R06C01


title: Genomic DNA from 3999997090_R02C01


title: Genomic DNA from 3999997095_R03C02


title: Genomic DNA from 3999997089_R04C02


title: Genomic DNA from 3999997124_R04C01


title: Genomic DNA from 3999997067_R04C02


title: Genomic DNA from 3999997069_R05C02


title: Genomic DNA from 3999997082_R04C01


title: Genomic DNA from 3999997057_R05C01


title: Genomic DNA from 3999997065_R06C02


title: Genomic DNA from 3999997064_R06C01


title: Genomic DNA from 3999997066_R06C01


title: Genomic DNA from 3999997055_R06C01


title: Genomic DNA from 3999997056_R03C02


title: Genomic DNA from 9994014161_R02C01


title: Genomic DNA from 3999997002_R02C01


title: Genomic DNA from 3999997024_R06C02


title: Genomic DNA from 3999997006_R05C01


title: Genomic DNA from 3999997003_R02C01


title: Genomic DNA from 3999997028_R01C02


title: Genomic DNA from 3999997030_R04C02


title: Genomic DNA from 3999984137_R02C02


title: Genomic DNA from 3999997015_R05C02


title: Genomic DNA from 3999984092_R06C01


title: Genomic DNA from 3999997007_R06C01


title: Genomic DNA from 3999984071_R03C01


title: Genomic DNA from 9993943004_R06C01


title: Genomic DNA from 3999997044_R01C02


title: Genomic DNA from 3999984066_R04C01


title: Genomic DNA from 3999984136_R06C02


title: Genomic DNA from 3999997004_R03C02


title: Genomic DNA from 3999984074_R04C01


title: Genomic DNA from 3999984062_R02C01


title: Genomic DNA from 3999984052_R02C01


title: Genomic DNA from 3999984048_R02C01


title: Genomic DNA from 3999984054_R05C01


title: Genomic DNA from 3999984043_R03C02


title: Genomic DNA from 3999984046_R06C01


title: Genomic DNA from 3999984042_R05C01


title: Genomic DNA from 3999984047_R03C01


title: Genomic DNA from 3999984035_R03C02


title: Genomic DNA from 3999997112_R02C02


title: Genomic DNA from 3999984033_R06C02


title: Genomic DNA from 3999984087_R03C01


title: Genomic DNA from 3999984089_R04C02


title: Genomic DNA from 3999984032_R06C02


title: Genomic DNA from 3999979140_R06C01


title: Genomic DNA from 3999984031_R04C01


title: Genomic DNA from 3999979141_R06C01


title: Genomic DNA from 3999984009_R04C02


title: Genomic DNA from 3999979130_R06C02


title: Genomic DNA from 3999979119_R03C02


title: Genomic DNA from 3999979125_R02C01


title: Genomic DNA from 3999979116_R06C01


title: Genomic DNA from 3999979139_R01C02


title: Genomic DNA from 3999984006_R06C01


title: Genomic DNA from 3999984008_R03C01


title: Genomic DNA from 3999979114_R02C02


title: Genomic DNA from 3999979123_R04C01


title: Genomic DNA from 3999979118_R06C01


title: Genomic DNA from 3999979108_R06C02


title: Genomic DNA from 3999979047_R02C02


title: Genomic DNA from 3999979105_R02C01


title: Genomic DNA from 3999979113_R01C02


title: Genomic DNA from 3999979045_R02C01


title: Genomic DNA from 3999979112_R04C01


title: Genomic DNA from 3999979035_R05C01


title: Genomic DNA from 3999979033_R02C02


title: Genomic DNA from 3999979034_R02C01


title: Genomic DNA from 3999979028_R01C01


title: Genomic DNA from 3999979027_R02C01


title: Genomic DNA from 3999979029_R04C02


title: Genomic DNA from 3999979115_R06C02


title: Genomic DNA from 3999979022_R02C01


title: Genomic DNA from 3999979018_R02C02


title: Genomic DNA from 3999979017_R05C01


title: Genomic DNA from 3999979009_R02C02


title: Genomic DNA from 3999979107_R02C01


title: Genomic DNA from 3999979040_R05C01


title: Genomic DNA from 3999979031_R06C02


title: Control DNA 6264509133_R02C01

data_processing: Enmix background correction, RELIC dye bias correction and RCP probe type adjustment

extract_protocol: Human unmethylated and fully methylated DNA was obtained from a commercial source (Zymo Research, Irving CA)

treatment_protocol: DNA  was bisulfite-converted in 96-well plates using the EZ DNA Methylation Kit (Zymo Research, Orange County CA)

tag: methylation level (%)

value: HCT116 double knock out (DKO)


title: Control DNA 6229009109_R04C02

tag: cell line


title: Control DNA 6229017028_R04C01


title: Control DNA 6229009149_R02C01


title: Control DNA 6229017010_R04C01


title: Control DNA 6285609005_R02C02


title: Control DNA 6229009134_R03C01


title: Control DNA 6229068028_R01C01


title: Control DNA 6229009072_R03C01


title: Control DNA 6229009103_R05C02


title: Control DNA 6264509133_R03C02


title: Control DNA 6264496119_R04C01


title: Control DNA 6229009073_R03C02


title: Control DNA 6229009138_R02C01


title: Control DNA 6264509075_R04C01


title: Control DNA 6229076062_R03C02


title: Control DNA 6229009109_R03C01


title: Control DNA 6229009073_R02C01


title: Control DNA 6229009103_R04C01


title: Control DNA 6229076057_R01C02


title: Control DNA 6264509073_R03C02


title: Control DNA 6229076068_R02C02


title: Control DNA 6229076045_R01C01


title: Control DNA 6264509073_R02C01


title: Control DNA 6229009097_R04C01


title: Control DNA 6229009076_R01C02


title: Control DNA 6229076062_R02C01


title: Control DNA 6229009072_R04C02


title: mESC_RNA_cell6991

first: Haiqing

last: Xiong

address: 5 Yiheyuan Road,  Haidian District

data_processing:
Basecalls performed using CASAVA version 1.8.2.
For ChIP part, Reads were de-multiplexed to generate single cell profiles by custom scripts.
Reads were aligned to mouse genome mm10 by bowtie2 (v 2.3.1) (ChIP part) and Hisat2 (version 2.0.4) (RNA part).
ChIP part:  Reads whose MAPQ >= 30 were determined as uniquely mapping reads. Duplication reads were removed by Picard. RNA part: reads were counted by HTSeq.
Genome_build: mm10
Supplementary_files_format_and_content: The processed files were aggregate bigwig files.

source_name: cell line

growth_protocol: mESCs were cultured at 37 °C with 5% CO2 and was maintained in high glucose DMEM

extract_protocol:
folloing CoTECH protocol
After PCR enrichment using Q5 polymerase, the 300-1,000 bp fragments were isolated using the 1.5% (w/v) agarose gel and purified once with 0.8 x AMpure XP beads

treatment_protocol: The mESCs were dissociated by 0.1% Trypsin digestion, and aliquot of cell numbers were directly used for CoTECH

value: cultured mouse embryonic stem cells

tag: chip antibody


title: mESC_RNA_cell6990


title: mESC_RNA_cell6992


title: mESC_RNA_cell6993


title: mESC_RNA_cell6987


title: mESC_RNA_cell6986


title: Control DNA 6264496120_R03C01


title: mESC_RNA_cell6985


title: mESC_RNA_cell6984


title: Control DNA 6229009067_R01C01


title: mESC_RNA_cell6988


title: mESC_RNA_cell6989


title: mESC_RNA_cell6981


title: mESC_RNA_cell6979


title: mESC_RNA_cell6976


title: mESC_RNA_cell6975


title: mESC_RNA_cell6977


title: mESC_RNA_cell6983


title: mESC_RNA_cell6980


title: mESC_RNA_cell6974


title: mESC_RNA_cell6978


title: mESC_RNA_cell6982


title: mESC_RNA_cell6972


title: mESC_RNA_cell6965


title: mESC_RNA_cell6967


title: mESC_RNA_cell6969


title: mESC_RNA_cell6968


title: mESC_RNA_cell6971


title: mESC_RNA_cell6973


title: mESC_RNA_cell6970


title: mESC_RNA_cell6963


title: mESC_RNA_cell6966


title: mESC_RNA_cell6964


title: mESC_RNA_cell6962


title: mESC_RNA_cell6960


title: mESC_RNA_cell6959


title: mESC_RNA_cell6958


title: mESC_RNA_cell6951


title: mESC_RNA_cell6955


title: mESC_RNA_cell6956


title: mESC_RNA_cell6953


title: mESC_RNA_cell6957


title: mESC_RNA_cell6954


title: mESC_RNA_cell6961


title: mESC_RNA_cell6947


title: mESC_RNA_cell6949


title: mESC_RNA_cell6948


title: mESC_RNA_cell6946


title: mESC_RNA_cell6945


title: mESC_RNA_cell6943


title: mESC_RNA_cell6950


title: mESC_RNA_cell6944


title: mESC_RNA_cell6939


title: mESC_RNA_cell6938


title: mESC_RNA_cell6940


title: mESC_RNA_cell6941


title: mESC_RNA_cell6937


title: mESC_RNA_cell6931


title: mESC_RNA_cell6932


title: mESC_RNA_cell6936


title: mESC_RNA_cell6933


title: mESC_RNA_cell6935


title: mESC_RNA_cell6934


title: mESC_RNA_cell6930


title: mESC_RNA_cell6929


title: mESC_RNA_cell6928


title: mESC_RNA_cell6926


title: mESC_RNA_cell6925


title: mESC_RNA_cell6924


title: mESC_RNA_cell6923


title: mESC_RNA_cell6927


title: Control DNA 6164621110_R01C01


title: Control DNA 6164621166_R03C02


title: Control DNA 6164621166_R02C01


title: Control DNA 6164655015_R05C02


title: Control DNA 6164655013_R02C02


title: mESC_RNA_cell6919


title: mESC_RNA_cell6917


title: mESC_RNA_cell6913


title: mESC_RNA_cell6916


title: mESC_RNA_cell6911


title: mESC_RNA_cell6914


title: mESC_RNA_cell6918


title: mESC_RNA_cell6912


title: mESC_RNA_cell6908


title: mESC_RNA_cell6915


title: Control DNA 6164655015_R04C01


title: Control DNA 6164647133_R04C02


title: mESC_RNA_cell6910


title: mESC_RNA_cell6906


title: mESC_RNA_cell6921


title: mESC_RNA_cell6907


title: mESC_RNA_cell6922


title: mESC_RNA_cell6904


title: mESC_RNA_cell6942


title: mESC_RNA_cell6920


title: mESC_RNA_cell6903


title: Control DNA 6164647133_R03C01


title: mESC_RNA_cell6902


title: mESC_RNA_cell6900


title: mESC_RNA_cell6901


title: Control DNA 6164655037_R03C01


title: mESC_RNA_cell6894


title: mESC_RNA_cell6952


title: mESC_RNA_cell6883


title: mESC_RNA_cell6886


title: mESC_RNA_cell6890


title: mESC_RNA_cell6893


title: mESC_RNA_cell6891


title: mESC_RNA_cell6887


title: mESC_RNA_cell6885


title: mESC_RNA_cell6888


title: mESC_RNA_cell6884


title: mESC_RNA_cell6879


title: mESC_RNA_cell6881


title: mESC_RNA_cell6892


title: mESC_RNA_cell6882


title: mESC_RNA_cell6880


title: mESC_RNA_cell6898


title: mESC_RNA_cell6896


title: mESC_RNA_cell6878


title: mESC_RNA_cell6877


title: mESC_RNA_cell6874


title: mESC_RNA_cell6895


title: mESC_RNA_cell6899


title: mESC_RNA_cell6876


title: mESC_RNA_cell6889


title: mESC_RNA_cell6875


title: mESC_RNA_cell6897


title: mESC_RNA_cell6872


title: mESC_RNA_cell6871


title: mESC_RNA_cell6870


title: mESC_RNA_cell6862


title: mESC_RNA_cell6866


title: mESC_RNA_cell6864


title: mESC_RNA_cell6867


title: mESC_RNA_cell6858


title: mESC_RNA_cell6865


title: mESC_RNA_cell6860


title: mESC_RNA_cell6857


title: mESC_RNA_cell6859


title: mESC_RNA_cell6861


title: mESC_RNA_cell6856


title: mESC_RNA_cell6873


title: mESC_RNA_cell6868


title: mESC_RNA_cell6854


title: mESC_RNA_cell6855


title: mESC_RNA_cell6863


title: mESC_RNA_cell6851


title: mESC_RNA_cell6849


title: mESC_RNA_cell6853


title: mESC_RNA_cell6850


title: mESC_RNA_cell6847


title: mESC_RNA_cell6852


title: mESC_RNA_cell6846


title: mESC_RNA_cell6848


title: mESC_RNA_cell6869


title: mESC_RNA_cell6845


title: mESC_RNA_cell6844


title: mESC_RNA_cell6843


title: mESC_RNA_cell6841


title: mESC_RNA_cell6839


title: mESC_RNA_cell6836


title: mESC_RNA_cell6840


title: mESC_RNA_cell6837


title: mESC_RNA_cell6834


title: mESC_RNA_cell6838


title: mESC_RNA_cell6831


title: mESC_RNA_cell6829


title: mESC_RNA_cell6842


title: mESC_RNA_cell6827


title: mESC_RNA_cell6828


title: mESC_RNA_cell6823


title: mESC_RNA_cell6830


title: mESC_RNA_cell6832


title: mESC_RNA_cell6825


title: mESC_RNA_cell6824


title: mESC_RNA_cell6819


title: mESC_RNA_cell6820


title: mESC_RNA_cell6826


title: mESC_RNA_cell6909


title: mESC_RNA_cell6835


title: mESC_RNA_cell6821


title: mESC_RNA_cell6822


title: mESC_RNA_cell6818


title: mESC_RNA_cell6816


title: mESC_RNA_cell6833


title: mESC_RNA_cell6815


title: mESC_RNA_cell6814


title: mESC_RNA_cell6809


title: mESC_RNA_cell6811


title: mESC_RNA_cell6810


title: mESC_RNA_cell6812


title: mESC_RNA_cell6813


title: mESC_RNA_cell6808


title: mESC_RNA_cell6807


title: mESC_RNA_cell6801


title: mESC_RNA_cell6800


title: mESC_RNA_cell6796


title: mESC_RNA_cell6802


title: mESC_RNA_cell6794


title: mESC_RNA_cell6805


title: mESC_RNA_cell6803


title: mESC_RNA_cell6799


title: mESC_RNA_cell6817


title: mESC_RNA_cell6797


title: mESC_RNA_cell6798


title: mESC_RNA_cell6806


title: mESC_RNA_cell6795


title: mESC_RNA_cell6791


title: mESC_RNA_cell6793


title: mESC_RNA_cell6788


title: mESC_RNA_cell6786


title: mESC_RNA_cell6789


title: mESC_RNA_cell6790


title: mESC_RNA_cell6804


title: mESC_RNA_cell6785


title: mESC_RNA_cell6783


title: mESC_RNA_cell6784


title: mESC_RNA_cell6782


title: mESC_RNA_cell6792


title: mESC_RNA_cell6781


title: mESC_RNA_cell6779


title: mESC_RNA_cell6778


title: mESC_RNA_cell6776


title: mESC_RNA_cell6771


title: mESC_RNA_cell6770


title: mESC_RNA_cell6775


title: mESC_RNA_cell6777


title: mESC_RNA_cell6780


title: mESC_RNA_cell6772


title: mESC_RNA_cell6773


title: mESC_RNA_cell6769


title: mESC_RNA_cell6905


title: mESC_RNA_cell6767


title: mESC_RNA_cell6766


title: mESC_RNA_cell6765


title: mESC_RNA_cell6787


title: mESC_RNA_cell6764


title: mESC_RNA_cell6762


title: mESC_RNA_cell6763


title: mESC_RNA_cell6760


title: mESC_RNA_cell6757


title: mESC_RNA_cell6761


title: mESC_RNA_cell6756


title: mESC_RNA_cell6759


title: mESC_RNA_cell6755


title: mESC_RNA_cell6750


title: mESC_RNA_cell6752


title: mESC_RNA_cell6749


title: mESC_RNA_cell6753


title: mESC_RNA_cell6754


title: mESC_RNA_cell6748


title: mESC_RNA_cell6746


title: mESC_RNA_cell6744


title: mESC_RNA_cell6747


title: mESC_RNA_cell6743


title: mESC_RNA_cell6768


title: mESC_RNA_cell6742


title: mESC_RNA_cell6774


title: mESC_RNA_cell6739


title: mESC_RNA_cell6741


title: mESC_RNA_cell6740


title: mESC_RNA_cell6738


title: mESC_RNA_cell6736


title: mESC_RNA_cell6758


title: mESC_RNA_cell6735


title: mESC_RNA_cell6737


title: mESC_RNA_cell6734


title: mESC_RNA_cell6732


title: mESC_RNA_cell6733


title: mESC_RNA_cell6730


title: mESC_RNA_cell6751


title: mESC_RNA_cell6728


title: mESC_RNA_cell6727


title: mESC_RNA_cell6745


title: mESC_RNA_cell6725


title: mESC_RNA_cell6726


title: mESC_RNA_cell6724


title: mESC_RNA_cell6723


title: mESC_RNA_cell6722


title: mESC_RNA_cell6721


title: mESC_RNA_cell6720


title: mESC_RNA_cell6719


title: mESC_RNA_cell6718


title: mESC_RNA_cell6729


title: mESC_RNA_cell6717


title: mESC_RNA_cell6715


title: mESC_RNA_cell6716


title: mESC_RNA_cell6714


title: mESC_RNA_cell6712


title: mESC_RNA_cell6731


title: mESC_RNA_cell6713


title: mESC_RNA_cell6710


title: mESC_RNA_cell6707


title: mESC_RNA_cell6709


title: mESC_RNA_cell6706


title: mESC_RNA_cell6705


title: mESC_RNA_cell6703


title: mESC_RNA_cell6704


title: mESC_RNA_cell6702


title: mESC_RNA_cell6700


title: mESC_RNA_cell6699


title: mESC_RNA_cell6697


title: mESC_RNA_cell6701


title: mESC_RNA_cell6694


title: mESC_RNA_cell6695


title: mESC_RNA_cell6693


title: mESC_RNA_cell6698


title: mESC_RNA_cell6692


title: mESC_RNA_cell6689


title: mESC_RNA_cell6691


title: mESC_RNA_cell6688


title: mESC_RNA_cell6687


title: mESC_RNA_cell6686


title: mESC_RNA_cell6690


title: mESC_RNA_cell6711


title: mESC_RNA_cell6708


title: mESC_RNA_cell6685


title: mESC_RNA_cell6683


title: mESC_RNA_cell6682


title: mESC_RNA_cell6678


title: mESC_RNA_cell6680


title: mESC_RNA_cell6679


title: mESC_RNA_cell6677


title: mESC_RNA_cell6675


title: mESC_RNA_cell6696


title: mESC_RNA_cell6672


title: mESC_RNA_cell6671


title: mESC_RNA_cell6673


title: mESC_RNA_cell6669


title: mESC_RNA_cell6670


title: mESC_RNA_cell6674


title: mESC_RNA_cell6668


title: mESC_RNA_cell6667


title: mESC_RNA_cell6666


title: mESC_RNA_cell6663


title: mESC_RNA_cell6664


title: mESC_RNA_cell6665


title: mESC_RNA_cell6662


title: mESC_RNA_cell6661


title: mESC_RNA_cell6684


title: mESC_RNA_cell6681


title: mESC_RNA_cell6659


title: mESC_RNA_cell6658


title: mESC_RNA_cell6660


title: mESC_RNA_cell6657


title: mESC_RNA_cell6656


title: mESC_RNA_cell6655


title: mESC_RNA_cell6653


title: mESC_RNA_cell6652


title: mESC_RNA_cell6650


title: mESC_RNA_cell6649


title: mESC_RNA_cell6676


title: mESC_RNA_cell6651


title: mESC_RNA_cell6647


title: mESC_RNA_cell6646


title: mESC_RNA_cell6644


title: mESC_RNA_cell6645


title: mESC_RNA_cell6642


title: mESC_RNA_cell6641


title: mESC_RNA_cell6654


title: mESC_RNA_cell6636


title: mESC_RNA_cell6633


title: mESC_RNA_cell6634


title: mESC_RNA_cell6632


title: mESC_RNA_cell6638


title: mESC_RNA_cell6628


title: mESC_RNA_cell6630


title: mESC_RNA_cell6637


title: mESC_RNA_cell6648


title: mESC_RNA_cell6635


title: mESC_RNA_cell6626


title: mESC_RNA_cell6624


title: mESC_RNA_cell6631


title: mESC_RNA_cell6640


title: mESC_RNA_cell6629


title: mESC_RNA_cell6627


title: mESC_RNA_cell6622


title: mESC_RNA_cell6643


title: mESC_RNA_cell6625


title: mESC_RNA_cell6621


title: mESC_RNA_cell6618


title: mESC_RNA_cell6619


title: mESC_RNA_cell6620


title: mESC_RNA_cell6617


title: mESC_RNA_cell6616


title: mESC_RNA_cell6615


title: mESC_RNA_cell6639


title: mESC_RNA_cell6614


title: mESC_RNA_cell6610


title: mESC_RNA_cell6611


title: mESC_RNA_cell6612


title: mESC_RNA_cell6613


title: mESC_RNA_cell6609


title: mESC_RNA_cell6607


title: mESC_RNA_cell6606


title: mESC_RNA_cell6608


title: mESC_RNA_cell6623


title: mESC_RNA_cell6605


title: mESC_RNA_cell6604


title: mESC_RNA_cell6602


title: mESC_RNA_cell6601


title: mESC_RNA_cell6603


title: mESC_RNA_cell6599


title: mESC_RNA_cell6597


title: mESC_RNA_cell6598


title: mESC_RNA_cell6596


title: mESC_RNA_cell6595


title: mESC_RNA_cell6594


title: mESC_RNA_cell6593


title: mESC_RNA_cell6592


title: mESC_RNA_cell6590


title: mESC_RNA_cell6591


title: mESC_RNA_cell6589


title: mESC_RNA_cell6586


title: mESC_RNA_cell6587


title: mESC_RNA_cell6585


title: mESC_RNA_cell6583


title: mESC_RNA_cell6584


title: mESC_RNA_cell6580


title: mESC_RNA_cell6581


title: mESC_RNA_cell6579


title: mESC_RNA_cell6578


title: mESC_RNA_cell6575


title: mESC_RNA_cell6600


title: mESC_RNA_cell6576


title: mESC_RNA_cell6572


title: mESC_RNA_cell6571


title: mESC_RNA_cell6574


title: mESC_RNA_cell6573


title: mESC_RNA_cell6567


title: mESC_RNA_cell6566


title: mESC_RNA_cell6565


title: mESC_RNA_cell6564


title: mESC_RNA_cell6562


title: mESC_RNA_cell6561


title: mESC_RNA_cell6588


title: mESC_RNA_cell6560


title: mESC_RNA_cell6559


title: mESC_RNA_cell6582


title: mESC_RNA_cell6558


title: mESC_RNA_cell6577


title: mESC_RNA_cell6557


title: mESC_RNA_cell6569


title: mESC_RNA_cell6556


title: mESC_RNA_cell6555


title: mESC_RNA_cell6554


title: mESC_RNA_cell6553


title: mESC_RNA_cell6550


title: mESC_RNA_cell6568


title: mESC_RNA_cell6552


title: mESC_RNA_cell6549


title: mESC_RNA_cell6551


title: mESC_RNA_cell6548


title: mESC_RNA_cell6544


title: mESC_RNA_cell6570


title: mESC_RNA_cell6545


title: mESC_RNA_cell6542


title: mESC_RNA_cell6546


title: mESC_RNA_cell6563


title: mESC_RNA_cell6540


title: mESC_RNA_cell6537


title: mESC_RNA_cell6541


title: mESC_RNA_cell6539


title: mESC_RNA_cell6536


title: mESC_RNA_cell6538


title: mESC_RNA_cell6535


title: mESC_RNA_cell6534


title: mESC_RNA_cell6533


title: mESC_RNA_cell6532


title: mESC_RNA_cell6547


title: mESC_RNA_cell6530


title: mESC_RNA_cell6531


title: mESC_RNA_cell6529


title: mESC_RNA_cell6528


title: mESC_RNA_cell6543


title: mESC_RNA_cell6527


title: mESC_RNA_cell6525


title: mESC_RNA_cell6526


title: mESC_RNA_cell6521


title: mESC_RNA_cell6524


title: mESC_RNA_cell6522


title: mESC_RNA_cell6520


title: mESC_RNA_cell6519


title: mESC_RNA_cell6523


title: mESC_RNA_cell6515


title: mESC_RNA_cell6513


title: mESC_RNA_cell6518


title: mESC_RNA_cell6514


title: mESC_RNA_cell6517


title: mESC_RNA_cell6516


title: mESC_RNA_cell6512


title: mESC_RNA_cell6510


title: mESC_RNA_cell6507


title: mESC_RNA_cell6506


title: mESC_RNA_cell6508


title: mESC_RNA_cell6505


title: mESC_RNA_cell6504


title: mESC_RNA_cell6503


title: mESC_RNA_cell6502


title: mESC_RNA_cell6501


title: mESC_RNA_cell6500


title: mESC_RNA_cell6498


title: mESC_RNA_cell6497


title: mESC_RNA_cell6499


title: mESC_RNA_cell6496


title: mESC_RNA_cell6495


title: mESC_RNA_cell6494


title: mESC_RNA_cell6492


title: mESC_RNA_cell6491


title: mESC_RNA_cell6493


title: mESC_RNA_cell6490


title: mESC_RNA_cell6511


title: mESC_RNA_cell6489


title: mESC_RNA_cell6486


title: mESC_RNA_cell6509


title: mESC_RNA_cell6487


title: mESC_RNA_cell6488


title: mESC_RNA_cell6484


title: mESC_RNA_cell6483


title: mESC_RNA_cell6485


title: mESC_RNA_cell6481


title: mESC_RNA_cell6480


title: mESC_RNA_cell6482


title: mESC_RNA_cell6478


title: mESC_RNA_cell6477


title: mESC_RNA_cell6479


title: mESC_RNA_cell6475


title: mESC_RNA_cell6474


title: mESC_RNA_cell6476


title: mESC_RNA_cell6472


title: mESC_RNA_cell6471


title: mESC_RNA_cell6469


title: mESC_RNA_cell6470


title: mESC_RNA_cell6467


title: mESC_RNA_cell6466


title: mESC_RNA_cell6463


title: mESC_RNA_cell6462


title: mESC_RNA_cell6465


title: mESC_RNA_cell6464


title: mESC_RNA_cell6461


title: mESC_RNA_cell6459


title: mESC_RNA_cell6458


title: mESC_RNA_cell6453


title: mESC_RNA_cell6454


title: mESC_RNA_cell6455


title: mESC_RNA_cell6457


title: mESC_RNA_cell6456


title: mESC_RNA_cell6460


title: mESC_RNA_cell6449


title: mESC_RNA_cell6450


title: mESC_RNA_cell6451


title: mESC_RNA_cell6452


title: mESC_RNA_cell6448


title: mESC_RNA_cell6447


title: mESC_RNA_cell6473


title: mESC_RNA_cell6468


title: mESC_RNA_cell6444


title: mESC_RNA_cell6443


title: mESC_RNA_cell6445


title: mESC_RNA_cell6442


title: mESC_RNA_cell6440


title: mESC_RNA_cell6439


title: mESC_RNA_cell6438


title: mESC_RNA_cell6437


title: mESC_RNA_cell6436


title: mESC_RNA_cell6435


title: mESC_RNA_cell6434


title: mESC_RNA_cell6432


title: mESC_RNA_cell6431


title: mESC_RNA_cell6430


title: mESC_RNA_cell6428


title: mESC_RNA_cell6429


title: mESC_RNA_cell6427


title: mESC_RNA_cell6425


title: mESC_RNA_cell6433


title: mESC_RNA_cell6446


title: mESC_RNA_cell6422


title: mESC_RNA_cell6419


title: mESC_RNA_cell6418


title: mESC_RNA_cell6423


title: mESC_RNA_cell6441


title: mESC_RNA_cell6414


title: mESC_RNA_cell6417


title: mESC_RNA_cell6415


title: mESC_RNA_cell6416


title: mESC_RNA_cell6413


title: mESC_RNA_cell6411


title: mESC_RNA_cell6412


title: mESC_RNA_cell6410


title: mESC_RNA_cell6409


title: mESC_RNA_cell6406


title: mESC_RNA_cell6407


title: mESC_RNA_cell6424


title: mESC_RNA_cell6405


title: mESC_RNA_cell6421


title: mESC_RNA_cell6402


title: mESC_RNA_cell6404


title: mESC_RNA_cell6400


title: mESC_RNA_cell6426


title: mESC_RNA_cell6401


title: mESC_RNA_cell6420


title: mESC_RNA_cell6399


title: mESC_RNA_cell6398


title: mESC_RNA_cell6403


title: mESC_RNA_cell6397


title: mESC_RNA_cell6390


title: mESC_RNA_cell6394


title: mESC_RNA_cell6396


title: mESC_RNA_cell6391


title: mESC_RNA_cell6393


title: mESC_RNA_cell6395


title: mESC_RNA_cell6392


title: mESC_RNA_cell6388


title: mESC_RNA_cell6385


title: mESC_RNA_cell6408


title: mESC_RNA_cell6389


title: mESC_RNA_cell6386


title: mESC_RNA_cell6387


title: mESC_RNA_cell6383


title: mESC_RNA_cell6381


title: mESC_RNA_cell6382


title: mESC_RNA_cell6380


title: mESC_RNA_cell6378


title: mESC_RNA_cell6376


title: mESC_RNA_cell6374


title: mESC_RNA_cell6373


title: mESC_RNA_cell6377


title: mESC_RNA_cell6375


title: mESC_RNA_cell6379


title: mESC_RNA_cell6372


title: mESC_RNA_cell6370


title: mESC_RNA_cell6369


title: mESC_RNA_cell6368


title: mESC_RNA_cell6366


title: mESC_RNA_cell6367


title: mESC_RNA_cell6360


title: mESC_RNA_cell6364


title: mESC_RNA_cell6363


title: mESC_RNA_cell6362


title: mESC_RNA_cell6365


title: mESC_RNA_cell6361


title: mESC_RNA_cell6384


title: mESC_RNA_cell6358


title: mESC_RNA_cell6355


title: mESC_RNA_cell6353


title: mESC_RNA_cell6354


title: mESC_RNA_cell6352


title: mESC_RNA_cell6350


title: mESC_RNA_cell6349


title: mESC_RNA_cell6344


title: mESC_RNA_cell6371


title: mESC_RNA_cell6351


title: mESC_RNA_cell6356


title: mESC_RNA_cell6347


title: mESC_RNA_cell6348


title: mESC_RNA_cell6343


title: mESC_RNA_cell6342


title: mESC_RNA_cell6341


title: mESC_RNA_cell6359


title: mESC_RNA_cell6340


title: mESC_RNA_cell6357


title: mESC_RNA_cell6335


title: mESC_RNA_cell6338


title: mESC_RNA_cell6337


title: mESC_RNA_cell6333


title: mESC_RNA_cell6336


title: mESC_RNA_cell6328


title: mESC_RNA_cell6339


title: mESC_RNA_cell6332


title: mESC_RNA_cell6331


title: mESC_RNA_cell6330


title: mESC_RNA_cell6334


title: mESC_RNA_cell6325


title: mESC_RNA_cell6327


title: mESC_RNA_cell6329


title: mESC_RNA_cell6346


title: mESC_RNA_cell6322


title: mESC_RNA_cell6345


title: mESC_RNA_cell6318


title: mESC_RNA_cell6326


title: mESC_RNA_cell6323


title: mESC_RNA_cell6314


title: mESC_RNA_cell6313


title: mESC_RNA_cell6321


title: mESC_RNA_cell6316


title: mESC_RNA_cell6317


title: mESC_RNA_cell6311


title: mESC_RNA_cell6315


title: mESC_RNA_cell6309


title: mESC_RNA_cell6312


title: mESC_RNA_cell6324


title: mESC_RNA_cell6310


title: mESC_RNA_cell6320


title: mESC_RNA_cell6306


title: mESC_RNA_cell6304


title: mESC_RNA_cell6307


title: mESC_RNA_cell6305


title: mESC_RNA_cell6319


title: mESC_RNA_cell6301


title: mESC_RNA_cell6302


title: mESC_RNA_cell6300


title: mESC_RNA_cell6303


title: mESC_RNA_cell6299


title: mESC_RNA_cell6296


title: mESC_RNA_cell6297


title: mESC_RNA_cell6298


title: mESC_RNA_cell6295


title: mESC_RNA_cell6294


title: mESC_RNA_cell6292


title: mESC_RNA_cell6308


title: mESC_RNA_cell6290


title: mESC_RNA_cell6291


title: mESC_RNA_cell6288


title: mESC_RNA_cell6287


title: mESC_RNA_cell6289


title: mESC_RNA_cell6277


title: mESC_RNA_cell6276


title: mESC_RNA_cell6280


title: mESC_RNA_cell6283


title: mESC_RNA_cell6284


title: mESC_RNA_cell6275


title: mESC_RNA_cell6273


title: mESC_RNA_cell6286


title: mESC_RNA_cell6274


title: mESC_RNA_cell6282


title: mESC_RNA_cell6278


title: mESC_RNA_cell6285


title: mESC_RNA_cell6281


title: mESC_RNA_cell6270


title: mESC_RNA_cell6267


title: mESC_RNA_cell6271


title: mESC_RNA_cell6272


title: mESC_RNA_cell6269


title: mESC_RNA_cell6266


title: mESC_RNA_cell6268


title: mESC_RNA_cell6293


title: mESC_RNA_cell6265


title: mESC_RNA_cell6262


title: mESC_RNA_cell6261


title: mESC_RNA_cell6264


title: mESC_RNA_cell6263


title: mESC_RNA_cell6260


title: mESC_RNA_cell6259


title: mESC_RNA_cell6279


title: mESC_RNA_cell6258


title: mESC_RNA_cell6255


title: mESC_RNA_cell6254


title: mESC_RNA_cell6256


title: mESC_RNA_cell6234


title: mESC_RNA_cell6235


title: mESC_RNA_cell6236


title: mESC_RNA_cell6245


title: mESC_RNA_cell6238


title: mESC_RNA_cell6239


title: mESC_RNA_cell6237


title: mESC_RNA_cell6251


title: mESC_RNA_cell6240


title: mESC_RNA_cell6247


title: mESC_RNA_cell6248


title: mESC_RNA_cell6242


title: mESC_RNA_cell6246


title: mESC_RNA_cell6243


title: mESC_RNA_cell6241


title: mESC_RNA_cell6252


title: mESC_RNA_cell6230


title: mESC_RNA_cell6228


title: mESC_RNA_cell6257


title: mESC_RNA_cell6232


title: mESC_RNA_cell6229


title: mESC_RNA_cell6253


title: mESC_RNA_cell6231


title: mESC_RNA_cell6249


title: mESC_RNA_cell6244


title: mESC_RNA_cell6233


title: mESC_RNA_cell6226


title: mESC_RNA_cell6225


title: mESC_RNA_cell6224


title: mESC_RNA_cell6227


title: mESC_RNA_cell6222


title: mESC_RNA_cell6223


title: mESC_RNA_cell6218


title: mESC_RNA_cell6214


title: mESC_RNA_cell6219


title: mESC_RNA_cell6215


title: mESC_RNA_cell6217


title: mESC_RNA_cell6213


title: mESC_RNA_cell6216


title: mESC_RNA_cell6209


title: mESC_RNA_cell6210


title: mESC_RNA_cell6221


title: mESC_RNA_cell6220


title: mESC_RNA_cell6207


title: mESC_RNA_cell6208


title: mESC_RNA_cell6204


title: mESC_RNA_cell6203


title: mESC_RNA_cell6201


title: mESC_RNA_cell6202


title: mESC_RNA_cell6200


title: mESC_RNA_cell6205


title: mESC_RNA_cell6206


title: mESC_RNA_cell6211


title: mESC_RNA_cell6199


title: mESC_RNA_cell6212


title: mESC_RNA_cell6198


title: mESC_RNA_cell6197


title: mESC_RNA_cell6196


title: mESC_RNA_cell6195


title: mESC_RNA_cell6193


title: mESC_RNA_cell6192


title: mESC_RNA_cell6191


title: mESC_RNA_cell6194


title: mESC_RNA_cell6190


title: mESC_RNA_cell6189


title: mESC_RNA_cell6186


title: mESC_RNA_cell6187


title: mESC_RNA_cell6188


title: mESC_RNA_cell6185


title: mESC_RNA_cell6184


title: mESC_RNA_cell6183


title: mESC_RNA_cell6182


title: mESC_RNA_cell6181


title: mESC_RNA_cell6180


title: mESC_RNA_cell6179


title: mESC_RNA_cell6178


title: mESC_RNA_cell6175


title: mESC_RNA_cell6177


title: mESC_RNA_cell6174


title: mESC_RNA_cell6173


title: mESC_RNA_cell6171


title: mESC_RNA_cell6172


title: mESC_RNA_cell6169


title: mESC_RNA_cell6170


title: mESC_RNA_cell6168


title: mESC_RNA_cell6167


title: mESC_RNA_cell6166


title: mESC_RNA_cell6165


title: mESC_RNA_cell6164


title: mESC_RNA_cell6162


title: mESC_RNA_cell6158


title: mESC_RNA_cell6159


title: mESC_RNA_cell6161


title: mESC_RNA_cell6157


title: mESC_RNA_cell6160


title: mESC_RNA_cell6155


title: mESC_RNA_cell6156


title: mESC_RNA_cell6153


title: mESC_RNA_cell6154


title: mESC_RNA_cell6176


title: mESC_RNA_cell6152


title: mESC_RNA_cell6151


title: mESC_RNA_cell6150


title: mESC_RNA_cell6149


title: mESC_RNA_cell6147


title: mESC_RNA_cell6145


title: mESC_RNA_cell6148


title: mESC_RNA_cell6146


title: mESC_RNA_cell6144


title: mESC_RNA_cell6143


title: mESC_RNA_cell6139


title: mESC_RNA_cell6138


title: mESC_RNA_cell6142


title: mESC_RNA_cell6141


title: mESC_RNA_cell6163


title: mESC_RNA_cell6135


title: mESC_RNA_cell6136


title: mESC_RNA_cell6131


title: mESC_RNA_cell6133


title: mESC_RNA_cell6130


title: mESC_RNA_cell6134


title: mESC_RNA_cell6132


title: mESC_RNA_cell6129


title: mESC_RNA_cell6127


title: mESC_RNA_cell6128


title: mESC_RNA_cell6140


title: mESC_RNA_cell6125


title: mESC_RNA_cell6123


title: mESC_RNA_cell6122


title: mESC_RNA_cell6124


title: mESC_RNA_cell6121


title: mESC_RNA_cell6119


title: mESC_RNA_cell6117


title: mESC_RNA_cell6116


title: mESC_RNA_cell6120


title: mESC_RNA_cell6118


title: mESC_RNA_cell6137


title: mESC_RNA_cell6115


title: mESC_RNA_cell6112


title: mESC_RNA_cell6110


title: mESC_RNA_cell6113


title: mESC_RNA_cell6111


title: mESC_RNA_cell6126


title: mESC_RNA_cell6108


title: mESC_RNA_cell6103


title: mESC_RNA_cell6101


title: mESC_RNA_cell6104


title: mESC_RNA_cell6100


title: mESC_RNA_cell6106


title: mESC_RNA_cell6099


title: mESC_RNA_cell6096


title: mESC_RNA_cell6098


title: mESC_RNA_cell6094


title: mESC_RNA_cell6092


title: mESC_RNA_cell6093


title: mESC_RNA_cell6087


title: mESC_RNA_cell6086


title: mESC_RNA_cell6091


title: mESC_RNA_cell6088


title: mESC_RNA_cell6089


title: mESC_RNA_cell6109


title: mESC_RNA_cell6085


title: mESC_RNA_cell6084


title: mESC_RNA_cell6090


title: mESC_RNA_cell6083


title: mESC_RNA_cell6102


title: mESC_RNA_cell6105


title: mESC_RNA_cell6080


title: mESC_RNA_cell6097


title: mESC_RNA_cell6082


title: mESC_RNA_cell6081


title: mESC_RNA_cell6079


title: mESC_RNA_cell6078


title: mESC_RNA_cell6077


title: mESC_RNA_cell6076


title: mESC_RNA_cell6095


title: mESC_RNA_cell6073


title: mESC_RNA_cell6075


title: mESC_RNA_cell6074


title: mESC_RNA_cell6070


title: mESC_RNA_cell6069


title: mESC_RNA_cell6066


title: mESC_RNA_cell6068


title: mESC_RNA_cell6067


title: mESC_RNA_cell6061


title: mESC_RNA_cell6063


title: mESC_RNA_cell6062


title: mESC_RNA_cell6065


title: mESC_RNA_cell6060


title: mESC_RNA_cell6058


title: mESC_RNA_cell6071


title: mESC_RNA_cell6064


title: mESC_RNA_cell6059


title: mESC_RNA_cell6056


title: mESC_RNA_cell6055


title: mESC_RNA_cell6054


title: mESC_RNA_cell6057


title: mESC_RNA_cell6053


title: mESC_RNA_cell6051


title: mESC_RNA_cell6049


title: mESC_RNA_cell6048


title: mESC_RNA_cell6047


title: mESC_RNA_cell6046


title: mESC_RNA_cell6043


title: mESC_RNA_cell6044


title: mESC_RNA_cell6045


title: mESC_RNA_cell6040


title: mESC_RNA_cell6041


title: mESC_RNA_cell6039


title: mESC_RNA_cell6038


title: mESC_RNA_cell6035


title: mESC_RNA_cell6037


title: mESC_RNA_cell6034


title: mESC_RNA_cell6107


title: mESC_RNA_cell6036


title: mESC_RNA_cell6052


title: mESC_RNA_cell6050


title: mESC_RNA_cell6032


title: mESC_RNA_cell6033


title: mESC_RNA_cell6031


title: mESC_RNA_cell6030


title: mESC_RNA_cell6029


title: mESC_RNA_cell6026


title: mESC_RNA_cell6025


title: mESC_RNA_cell6024


title: mESC_RNA_cell6022


title: mESC_RNA_cell6023


title: mESC_RNA_cell6042


title: mESC_RNA_cell6021


title: mESC_RNA_cell6018


title: mESC_RNA_cell6019


title: mESC_RNA_cell6020


title: mESC_RNA_cell6017


title: mESC_RNA_cell6016


title: mESC_RNA_cell6250


title: mESC_RNA_cell6013


title: mESC_RNA_cell6014


title: mESC_RNA_cell6028


title: mESC_RNA_cell6012


title: mESC_RNA_cell6009


title: mESC_RNA_cell6010


title: mESC_RNA_cell6008


title: mESC_RNA_cell6006


title: mESC_RNA_cell6007


title: mESC_RNA_cell6005


title: mESC_RNA_cell6004


title: mESC_RNA_cell6003


title: mESC_RNA_cell6001


title: mESC_RNA_cell5998


title: mESC_RNA_cell6000


title: mESC_RNA_cell5999


title: mESC_RNA_cell6015


title: mESC_RNA_cell5994


title: mESC_RNA_cell5996


title: mESC_RNA_cell5997


title: mESC_RNA_cell5993


title: mESC_RNA_cell5995


title: mESC_RNA_cell5990


title: mESC_RNA_cell5992


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title: mESC_RNA_cell5988


title: mESC_RNA_cell5991


title: mESC_RNA_cell6011


title: mESC_RNA_cell5987


title: mESC_RNA_cell5985


title: mESC_RNA_cell5983


title: mESC_RNA_cell5980


title: mESC_RNA_cell5979


title: mESC_RNA_cell5984


title: mESC_RNA_cell6002


title: mESC_RNA_cell5982


title: mESC_RNA_cell6072


title: mESC_RNA_cell5981


title: mESC_RNA_cell5977


title: mESC_RNA_cell5976


title: mESC_RNA_cell5975


title: mESC_RNA_cell5973


title: mESC_RNA_cell5971


title: mESC_RNA_cell5972


title: mESC_RNA_cell5969


title: mESC_RNA_cell5968


title: mESC_RNA_cell5966


title: mESC_RNA_cell5986


title: mESC_RNA_cell5970


title: mESC_RNA_cell5965


title: mESC_RNA_cell5962


title: mESC_RNA_cell5967


title: mESC_RNA_cell5964


title: mESC_RNA_cell5963


title: mESC_RNA_cell5978


title: mESC_RNA_cell5961


title: mESC_RNA_cell5953


title: mESC_RNA_cell5959


title: mESC_RNA_cell5955


title: mESC_RNA_cell5958


title: mESC_RNA_cell5957


title: mESC_RNA_cell5956


title: mESC_RNA_cell5951


title: mESC_RNA_cell5954


title: mESC_RNA_cell5952


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title: mESC_RNA_cell5948


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title: mESC_RNA_cell5945


title: mESC_RNA_cell5942


title: mESC_RNA_cell5941


title: mESC_RNA_cell5938


title: mESC_RNA_cell5939


title: mESC_RNA_cell5937


title: mESC_RNA_cell5935


title: mESC_RNA_cell5936


title: mESC_RNA_cell5934


title: mESC_RNA_cell5932


title: mESC_RNA_cell5931


title: mESC_RNA_cell5930


title: mESC_RNA_cell5927


title: mESC_RNA_cell5928


title: mESC_RNA_cell5933


title: mESC_RNA_cell5923


title: mESC_RNA_cell5929


title: mESC_RNA_cell5926


title: mESC_RNA_cell5922


title: mESC_RNA_cell5924


title: mESC_RNA_cell5946


title: mESC_RNA_cell5925


title: mESC_RNA_cell5921


title: mESC_RNA_cell5919


title: mESC_RNA_cell5920


title: mESC_RNA_cell5944


title: mESC_RNA_cell5940


title: mESC_RNA_cell5943


title: mESC_RNA_cell5917


title: mESC_RNA_cell5915


title: mESC_RNA_cell5916


title: mESC_RNA_cell5914


title: mESC_RNA_cell5913


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title: mESC_RNA_cell5911


title: mESC_RNA_cell5912


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title: mESC_RNA_cell5909


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title: mESC_RNA_cell5907


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title: mESC_RNA_cell5903


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title: mESC_RNA_cell5901


title: mESC_RNA_cell5899


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title: mESC_RNA_cell5861


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title: mESC_RNA_cell5854


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title: mESC_RNA_cell5843


title: mESC_RNA_cell5844


title: mESC_RNA_cell5842


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title: mESC_RNA_cell5838


title: mESC_RNA_cell5848


title: mESC_RNA_cell5839


title: mESC_RNA_cell5833


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title: mESC_RNA_cell5832


title: mESC_RNA_cell5828


title: mESC_RNA_cell5835


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title: mESC_RNA_cell5830


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title: mESC_RNA_cell5845


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title: mESC_RNA_cell5823


title: mESC_RNA_cell5824


title: mESC_RNA_cell5826


title: mESC_RNA_cell5820


title: mESC_RNA_cell5819


title: mESC_RNA_cell5821


title: mESC_RNA_cell5822


title: mESC_RNA_cell5837


title: mESC_RNA_cell5836


title: mESC_RNA_cell5816


title: mESC_RNA_cell5817


title: mESC_RNA_cell5815


title: mESC_RNA_cell5814


title: mESC_RNA_cell5813


title: mESC_RNA_cell5812


title: mESC_RNA_cell5809


title: mESC_RNA_cell5810


title: mESC_RNA_cell5808


title: mESC_RNA_cell5806


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title: mESC_RNA_cell5802


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title: mESC_RNA_cell5795


title: mESC_RNA_cell5793


title: mESC_RNA_cell5792


title: mESC_RNA_cell5789


title: mESC_RNA_cell5818


title: mESC_RNA_cell5791


title: mESC_RNA_cell5796


title: mESC_RNA_cell5786


title: mESC_RNA_cell5787


title: mESC_RNA_cell5790


title: mESC_RNA_cell5807


title: mESC_RNA_cell5785


title: mESC_RNA_cell5782


title: mESC_RNA_cell5781


title: mESC_RNA_cell5780


title: mESC_RNA_cell5779


title: mESC_RNA_cell5776


title: mESC_RNA_cell5778


title: mESC_RNA_cell5775


title: mESC_RNA_cell5777


title: mESC_RNA_cell5774


title: mESC_RNA_cell5773


title: mESC_RNA_cell5794


title: mESC_RNA_cell5771


title: mESC_RNA_cell5770


title: mESC_RNA_cell5769


title: mESC_RNA_cell5772


title: mESC_RNA_cell5788


title: mESC_RNA_cell5768


title: mESC_RNA_cell5766


title: mESC_RNA_cell5764


title: mESC_RNA_cell5767


title: mESC_RNA_cell5763


title: mESC_RNA_cell5784


title: mESC_RNA_cell5783


title: mESC_RNA_cell5762


title: mESC_RNA_cell5759


title: mESC_RNA_cell5765


title: mESC_RNA_cell5758


title: mESC_RNA_cell5761


title: mESC_RNA_cell5757


title: mESC_RNA_cell5756


title: mESC_RNA_cell5760


title: mESC_RNA_cell5755


title: mESC_RNA_cell5752


title: mESC_RNA_cell5748


title: mESC_RNA_cell5751


title: mESC_RNA_cell5750


title: mESC_RNA_cell5749


title: mESC_RNA_cell5754


title: mESC_RNA_cell5745


title: mESC_RNA_cell5747


title: mESC_RNA_cell5753


title: mESC_RNA_cell5743


title: mESC_RNA_cell5746


title: mESC_RNA_cell5744


title: mESC_RNA_cell5741


title: mESC_RNA_cell5740


title: mESC_RNA_cell5738


title: mESC_RNA_cell5737


title: mESC_RNA_cell5742


title: mESC_RNA_cell5739


title: mESC_RNA_cell5735


title: mESC_RNA_cell5726


title: mESC_RNA_cell5727


title: mESC_RNA_cell5734


title: mESC_RNA_cell5733


title: mESC_RNA_cell5732


title: mESC_RNA_cell5721


title: mESC_RNA_cell5720


title: mESC_RNA_cell5718


title: mESC_RNA_cell5731


title: mESC_RNA_cell5716


title: mESC_RNA_cell5730


title: mESC_RNA_cell5714


title: mESC_RNA_cell5717


title: mESC_RNA_cell5710


title: mESC_RNA_cell5708


title: mESC_RNA_cell5725


title: mESC_RNA_cell5728


title: mESC_RNA_cell5715


title: mESC_RNA_cell5709


title: mESC_RNA_cell5723


title: mESC_RNA_cell5713


title: mESC_RNA_cell5722


title: mESC_RNA_cell5736


title: mESC_RNA_cell5729


title: mESC_RNA_cell5704


title: mESC_RNA_cell5712


title: mESC_RNA_cell5724


title: mESC_RNA_cell5707


title: mESC_RNA_cell5702


title: mESC_RNA_cell5706


title: mESC_RNA_cell5705


title: mESC_RNA_cell5719


title: mESC_RNA_cell5701


title: mESC_RNA_cell5700


title: mESC_RNA_cell5703


title: mESC_RNA_cell5699


title: mESC_RNA_cell5698


title: mESC_RNA_cell5697


title: mESC_RNA_cell5711


title: mESC_RNA_cell5694


title: mESC_RNA_cell5695


title: mESC_RNA_cell5693


title: mESC_RNA_cell5692


title: mESC_RNA_cell5691


title: mESC_RNA_cell5688


title: mESC_RNA_cell5689


title: mESC_RNA_cell5690


title: mESC_RNA_cell5686


title: mESC_RNA_cell5687


title: mESC_RNA_cell5684


title: mESC_RNA_cell5683


title: mESC_RNA_cell5682


title: mESC_RNA_cell5681


title: mESC_RNA_cell5679


title: mESC_RNA_cell5678


title: mESC_RNA_cell5676


title: mESC_RNA_cell5675


title: mESC_RNA_cell5680


title: mESC_RNA_cell5674


title: mESC_RNA_cell5672


title: mESC_RNA_cell5671


title: mESC_RNA_cell5696


title: mESC_RNA_cell5673


title: mESC_RNA_cell5669


title: mESC_RNA_cell5668


title: mESC_RNA_cell5666


title: mESC_RNA_cell5667


title: mESC_RNA_cell5685


title: mESC_RNA_cell5660


title: mESC_RNA_cell5663


title: mESC_RNA_cell5665


title: mESC_RNA_cell5658


title: mESC_RNA_cell5657


title: mESC_RNA_cell5662


title: mESC_RNA_cell5659


title: mESC_RNA_cell5655


title: mESC_RNA_cell5677


title: mESC_RNA_cell5656


title: mESC_RNA_cell5653


title: mESC_RNA_cell5661


title: mESC_RNA_cell5652


title: mESC_RNA_cell5654


title: mESC_RNA_cell5650


title: mESC_RNA_cell5649


title: mESC_RNA_cell5647


title: mESC_RNA_cell5646


title: mESC_RNA_cell5648


title: mESC_RNA_cell5670


title: mESC_RNA_cell5644


title: mESC_RNA_cell5645


title: mESC_RNA_cell5643


title: mESC_RNA_cell5642


title: mESC_RNA_cell5664


title: mESC_RNA_cell5641


title: mESC_RNA_cell5639


title: mESC_RNA_cell5640


title: mESC_RNA_cell5638


title: mESC_RNA_cell5636


title: mESC_RNA_cell5637


title: mESC_RNA_cell5635


title: mESC_RNA_cell5634


title: mESC_RNA_cell5633


title: mESC_RNA_cell5631


title: mESC_RNA_cell5632


title: mESC_RNA_cell5651


title: mESC_RNA_cell5630


title: mESC_RNA_cell5629


title: mESC_RNA_cell5628


title: mESC_RNA_cell5624


title: mESC_RNA_cell5623


title: mESC_RNA_cell5622


title: mESC_RNA_cell5621


title: mESC_RNA_cell5619


title: mESC_RNA_cell5626


title: mESC_RNA_cell5620


title: mESC_RNA_cell5625


title: mESC_RNA_cell5618


title: mESC_RNA_cell5615


title: mESC_RNA_cell5617


title: mESC_RNA_cell5616


title: mESC_RNA_cell5611


title: mESC_RNA_cell5613


title: mESC_RNA_cell5612


title: mESC_RNA_cell5610


title: mESC_RNA_cell5608


title: mESC_RNA_cell5609


title: mESC_RNA_cell5606


title: mESC_RNA_cell5605


title: mESC_RNA_cell5604


title: mESC_RNA_cell5627


title: mESC_RNA_cell5602


title: mESC_RNA_cell5601


title: mESC_RNA_cell5600


title: mESC_RNA_cell5599


title: mESC_RNA_cell5597


title: mESC_RNA_cell5596


title: mESC_RNA_cell5594


title: mESC_RNA_cell5593


title: mESC_RNA_cell5614


title: mESC_RNA_cell5592


title: mESC_RNA_cell5591


title: mESC_RNA_cell5589


title: mESC_RNA_cell5588


title: mESC_RNA_cell5587


title: mESC_RNA_cell5590


title: mESC_RNA_cell5586


title: mESC_RNA_cell5585


title: mESC_RNA_cell5584


title: mESC_RNA_cell5583


title: mESC_RNA_cell5582


title: mESC_RNA_cell5603


title: mESC_RNA_cell5607


title: mESC_RNA_cell5581


title: mESC_RNA_cell5580


title: mESC_RNA_cell5578


title: mESC_RNA_cell5579


title: mESC_RNA_cell5577


title: mESC_RNA_cell5598


title: mESC_RNA_cell5576


title: mESC_RNA_cell5571


title: mESC_RNA_cell5574


title: mESC_RNA_cell5572


title: mESC_RNA_cell5570


title: mESC_RNA_cell5568


title: mESC_RNA_cell5567


title: mESC_RNA_cell5566


title: mESC_RNA_cell5565


title: mESC_RNA_cell5573


title: mESC_RNA_cell5569


title: mESC_RNA_cell5564


title: mESC_RNA_cell5595


title: mESC_RNA_cell5563


title: mESC_RNA_cell5562


title: mESC_RNA_cell5559


title: mESC_RNA_cell5560


title: mESC_RNA_cell5558


title: mESC_RNA_cell5561


title: mESC_RNA_cell5557


title: mESC_RNA_cell5575


title: mESC_RNA_cell5555


title: mESC_RNA_cell5554


title: mESC_RNA_cell5552


title: mESC_RNA_cell5556


title: mESC_RNA_cell5551


title: mESC_RNA_cell5550


title: mESC_RNA_cell5553


title: mESC_RNA_cell5547


title: mESC_RNA_cell5548


title: mESC_RNA_cell5546


title: mESC_RNA_cell5545


title: mESC_RNA_cell5543


title: mESC_RNA_cell5544


title: mESC_RNA_cell5542


title: mESC_RNA_cell5540


title: mESC_RNA_cell5541


title: mESC_RNA_cell5537


title: mESC_RNA_cell5538


title: mESC_RNA_cell5534


title: mESC_RNA_cell5536


title: mESC_RNA_cell5535


title: mESC_RNA_cell5532


title: mESC_RNA_cell5531


title: mESC_RNA_cell5533


title: mESC_RNA_cell5530


title: mESC_RNA_cell5529


title: mESC_RNA_cell5528


title: mESC_RNA_cell5526


title: mESC_RNA_cell5525


title: mESC_RNA_cell5521


title: mESC_RNA_cell5524


title: mESC_RNA_cell5519


title: mESC_RNA_cell5520


title: mESC_RNA_cell5523


title: mESC_RNA_cell5527


title: mESC_RNA_cell5549


title: mESC_RNA_cell5518


title: mESC_RNA_cell5539


title: mESC_RNA_cell5515


title: mESC_RNA_cell5513


title: mESC_RNA_cell5516


title: mESC_RNA_cell5514


title: mESC_RNA_cell5517


title: mESC_RNA_cell5510


title: mESC_RNA_cell5511


title: mESC_RNA_cell5509


title: mESC_RNA_cell5506


title: mESC_RNA_cell5507


title: mESC_RNA_cell5503


title: mESC_RNA_cell5504


title: mESC_RNA_cell5505


title: mESC_RNA_cell5502


title: mESC_RNA_cell5522


title: mESC_RNA_cell5499


title: mESC_RNA_cell5501


title: mESC_RNA_cell5498


title: mESC_RNA_cell5495


title: mESC_RNA_cell5496


title: mESC_RNA_cell5497


title: mESC_RNA_cell5493


title: mESC_RNA_cell5512


title: mESC_RNA_cell5491


title: mESC_RNA_cell5489


title: mESC_RNA_cell5492


title: mESC_RNA_cell5488


title: mESC_RNA_cell5490


title: mESC_RNA_cell5487


title: mESC_RNA_cell5508


title: mESC_RNA_cell5484


title: mESC_RNA_cell5486


title: mESC_RNA_cell5483


title: mESC_RNA_cell5481


title: mESC_RNA_cell5482


title: mESC_RNA_cell5500


title: mESC_RNA_cell5485


title: mESC_RNA_cell5480


title: mESC_RNA_cell5479


title: mESC_RNA_cell5476


title: mESC_RNA_cell5474


title: mESC_RNA_cell5477


title: mESC_RNA_cell5473


title: mESC_RNA_cell5478


title: mESC_RNA_cell5475


title: mESC_RNA_cell5472


title: mESC_RNA_cell5471


title: mESC_RNA_cell5494


title: mESC_RNA_cell5469


title: mESC_RNA_cell5470


title: mESC_RNA_cell5464


title: mESC_RNA_cell5466


title: mESC_RNA_cell5465


title: mESC_RNA_cell5456


title: mESC_RNA_cell5457


title: mESC_RNA_cell5461


title: mESC_RNA_cell5458


title: mESC_RNA_cell5463


title: mESC_RNA_cell5459


title: mESC_RNA_cell5454


title: mESC_RNA_cell5455


title: mESC_RNA_cell5451


title: mESC_RNA_cell5452


title: mESC_RNA_cell5448


title: mESC_RNA_cell5449


title: mESC_RNA_cell5450


title: mESC_RNA_cell5443


title: mESC_RNA_cell5445


title: mESC_RNA_cell5442


title: mESC_RNA_cell5446


title: mESC_RNA_cell5453


title: mESC_RNA_cell5441


title: mESC_RNA_cell5444


title: mESC_RNA_cell5440


title: mESC_RNA_cell5439


title: mESC_RNA_cell5462


title: mESC_RNA_cell5460


title: mESC_RNA_cell5436


title: mESC_RNA_cell5437


title: mESC_RNA_cell5433


title: mESC_RNA_cell5468


title: mESC_RNA_cell5434


title: mESC_RNA_cell5438


title: mESC_RNA_cell5435


title: mESC_RNA_cell5432


title: mESC_RNA_cell5467


title: mESC_RNA_cell5430


title: mESC_RNA_cell5431


title: mESC_RNA_cell5429


title: mESC_RNA_cell5447


title: mESC_RNA_cell5428


title: mESC_RNA_cell5427


title: mESC_RNA_cell5426


title: mESC_RNA_cell5425


title: mESC_RNA_cell5423


title: mESC_RNA_cell5424


title: mESC_RNA_cell5421


title: mESC_RNA_cell5419


title: mESC_RNA_cell5422


title: mESC_RNA_cell5420


title: mESC_RNA_cell5418


title: mESC_RNA_cell5417


title: mESC_RNA_cell5415


title: mESC_RNA_cell5414


title: mESC_RNA_cell5413


title: mESC_RNA_cell5416


title: mESC_RNA_cell5412


title: mESC_RNA_cell5410


title: mESC_RNA_cell5411


title: mESC_RNA_cell5408


title: mESC_RNA_cell5409


title: mESC_RNA_cell5407


title: mESC_RNA_cell5406


title: mESC_RNA_cell5403


title: mESC_RNA_cell5402


title: mESC_RNA_cell5400


title: mESC_RNA_cell5397


title: mESC_RNA_cell5399


title: mESC_RNA_cell5396


title: mESC_RNA_cell5395


title: mESC_RNA_cell5401


title: mESC_RNA_cell5394


title: mESC_RNA_cell5391


title: mESC_RNA_cell5389


title: mESC_RNA_cell5387


title: mESC_RNA_cell5385


title: mESC_RNA_cell5392


title: mESC_RNA_cell5386


title: mESC_RNA_cell5383


title: mESC_RNA_cell5388


title: mESC_RNA_cell5384


title: mESC_RNA_cell5382


title: mESC_RNA_cell5404


title: mESC_RNA_cell5405


title: mESC_RNA_cell5377


title: mESC_RNA_cell5380


title: mESC_RNA_cell5378


title: mESC_RNA_cell5398


title: mESC_RNA_cell5381


title: mESC_RNA_cell5376


title: mESC_RNA_cell5375


title: mESC_RNA_cell5379


title: mESC_RNA_cell5393


title: mESC_RNA_cell5369


title: mESC_RNA_cell5374


title: mESC_RNA_cell5390


title: mESC_RNA_cell5360


title: mESC_RNA_cell5371


title: mESC_RNA_cell5364


title: mESC_RNA_cell5373


title: mESC_RNA_cell5372


title: mESC_RNA_cell5357


title: mESC_RNA_cell5363


title: mESC_RNA_cell5370


title: mESC_RNA_cell5365


title: mESC_RNA_cell5368


title: mESC_RNA_cell5359


title: mESC_RNA_cell5367


title: mESC_RNA_cell5358


title: mESC_RNA_cell5356


title: mESC_RNA_cell5366


title: mESC_RNA_cell5353


title: mESC_RNA_cell5351


title: mESC_RNA_cell5354


title: mESC_RNA_cell5350


title: mESC_RNA_cell5352


title: mESC_RNA_cell5349


title: mESC_RNA_cell5355


title: mESC_RNA_cell5348


title: mESC_RNA_cell5347


title: mESC_RNA_cell5361


title: mESC_RNA_cell5346


title: mESC_RNA_cell5345


title: mESC_RNA_cell5343


title: mESC_RNA_cell5344


title: mESC_RNA_cell5339


title: mESC_RNA_cell5338


title: mESC_RNA_cell5341


title: mESC_RNA_cell5337


title: mESC_RNA_cell5330


title: mESC_RNA_cell5329


title: mESC_RNA_cell5362


title: mESC_RNA_cell5328


title: mESC_RNA_cell5340


title: mESC_RNA_cell5336


title: mESC_RNA_cell5334


title: mESC_RNA_cell5332


title: mESC_RNA_cell5333


title: mESC_RNA_cell5324


title: mESC_RNA_cell5327


title: mESC_RNA_cell5323


title: mESC_RNA_cell5321


title: mESC_RNA_cell5326


title: mESC_RNA_cell5320


title: mESC_RNA_cell5319


title: mESC_RNA_cell5322


title: mESC_RNA_cell5318


title: mESC_RNA_cell5317


title: mESC_RNA_cell5342


title: mESC_RNA_cell5335


title: mESC_RNA_cell5331


title: mESC_RNA_cell5316


title: mESC_RNA_cell5314


title: mESC_RNA_cell5315


title: mESC_RNA_cell5313


title: mESC_RNA_cell5312


title: mESC_RNA_cell5310


title: mESC_RNA_cell5309


title: mESC_RNA_cell5311


title: mESC_RNA_cell5307


title: mESC_RNA_cell5325


title: mESC_RNA_cell5305


title: mESC_RNA_cell5308


title: mESC_RNA_cell5306


title: mESC_RNA_cell5300


title: mESC_RNA_cell5302


title: mESC_RNA_cell5303


title: mESC_RNA_cell5299


title: mESC_RNA_cell5298


title: mESC_RNA_cell5297


title: mESC_RNA_cell5296


title: mESC_RNA_cell5301


title: mESC_RNA_cell5294


title: mESC_RNA_cell5292


title: mESC_RNA_cell5293


title: mESC_RNA_cell5291


title: mESC_RNA_cell5290


title: mESC_RNA_cell5289


title: mESC_RNA_cell5288


title: mESC_RNA_cell5286


title: mESC_RNA_cell5304


title: mESC_RNA_cell5282


title: mESC_RNA_cell5283


title: mESC_RNA_cell5280


title: mESC_RNA_cell5285


title: mESC_RNA_cell5295


title: mESC_RNA_cell5281


title: mESC_RNA_cell5278


title: mESC_RNA_cell5277


title: mESC_RNA_cell5274


title: mESC_RNA_cell5269


title: mESC_RNA_cell5273


title: mESC_RNA_cell5279


title: mESC_RNA_cell5276


title: mESC_RNA_cell5271


title: mESC_RNA_cell5268


title: mESC_RNA_cell5267


title: mESC_RNA_cell5265


title: mESC_RNA_cell5264


title: mESC_RNA_cell5266


title: mESC_RNA_cell5262


title: mESC_RNA_cell5263


title: mESC_RNA_cell5261


title: mESC_RNA_cell5284


title: mESC_RNA_cell5260


title: mESC_RNA_cell5270


title: mESC_RNA_cell5275


title: mESC_RNA_cell5272


title: mESC_RNA_cell5259


title: mESC_RNA_cell5258


title: mESC_RNA_cell5250


title: mESC_RNA_cell5257


title: mESC_RNA_cell5252


title: mESC_RNA_cell5254


title: mESC_RNA_cell5249


title: mESC_RNA_cell5253


title: mESC_RNA_cell5248


title: mESC_RNA_cell5251


title: mESC_RNA_cell5255


title: mESC_RNA_cell5246


title: mESC_RNA_cell5245


title: mESC_RNA_cell5244


title: mESC_RNA_cell5247


title: mESC_RNA_cell5239


title: mESC_RNA_cell5238


title: mESC_RNA_cell5243


title: mESC_RNA_cell5237


title: mESC_RNA_cell5236


title: mESC_RNA_cell5287


title: mESC_RNA_cell5235


title: mESC_RNA_cell5234


title: mESC_RNA_cell5241


title: mESC_RNA_cell5242


title: mESC_RNA_cell5240


title: mESC_RNA_cell5256


title: mESC_RNA_cell5233


title: mESC_RNA_cell5232


title: mESC_RNA_cell5230


title: mESC_RNA_cell5231


title: mESC_RNA_cell5227


title: mESC_RNA_cell5224


title: mESC_RNA_cell5229


title: mESC_RNA_cell5226


title: mESC_RNA_cell5225


title: mESC_RNA_cell5220


title: mESC_RNA_cell5221


title: mESC_RNA_cell5228


title: mESC_RNA_cell5218


title: mESC_RNA_cell5219


title: mESC_RNA_cell5222


title: mESC_RNA_cell5216


title: mESC_RNA_cell5223


title: mESC_RNA_cell5214


title: mESC_RNA_cell5212


title: mESC_RNA_cell5213


title: mESC_RNA_cell5208


title: mESC_RNA_cell5209


title: mESC_RNA_cell5207


title: mESC_RNA_cell5211


title: mESC_RNA_cell5215


title: mESC_RNA_cell5204


title: mESC_RNA_cell5210


title: mESC_RNA_cell5203


title: mESC_RNA_cell5202


title: mESC_RNA_cell5201


title: mESC_RNA_cell5200


title: mESC_RNA_cell5217


title: mESC_RNA_cell5199


title: mESC_RNA_cell5196


title: mESC_RNA_cell5197


title: mESC_RNA_cell5195


title: mESC_RNA_cell5194


title: mESC_RNA_cell5188


title: mESC_RNA_cell5187


title: mESC_RNA_cell5193


title: mESC_RNA_cell5192


title: mESC_RNA_cell5205


title: mESC_RNA_cell5191


title: mESC_RNA_cell5184


title: mESC_RNA_cell5183


title: mESC_RNA_cell5190


title: mESC_RNA_cell5189


title: mESC_RNA_cell5180


title: mESC_RNA_cell5206


title: mESC_RNA_cell5186


title: mESC_RNA_cell5182


title: mESC_RNA_cell5185


title: mESC_RNA_cell5176


title: mESC_RNA_cell5177


title: mESC_RNA_cell5179


title: mESC_RNA_cell5175


title: mESC_RNA_cell5173


title: mESC_RNA_cell5198


title: mESC_RNA_cell5170


title: mESC_RNA_cell5181


title: mESC_RNA_cell5178


title: mESC_RNA_cell5172


title: mESC_RNA_cell5171


title: mESC_RNA_cell5165


title: mESC_RNA_cell5164


title: mESC_RNA_cell5168


title: mESC_RNA_cell5167