title: M_P7_normal_CD31_1_DC30_C16


title: M_E18.5_normal_CD31_1_DC30_I3

status: Public on May 05 2021

type: SRA

city: Kensington

first: Fabio

last: Zanini

state: NSW

address: High and Botany St

country: Australia

institute: University of New South Wales

library_source: transcriptomic

data_processing:
Mapping against human genome with VEEV-TC83-GFP added as an additional chromosome (using STAR 2.5.2b)
Counting gene expression using htseq-count 0.10
Genome_build: GRCh38
Supplementary_files_format_and_content: Counts table: raw read counts, not notmalized, rows are gene names, columns are cell names. Metadata file: rows are cell names, columns are metadata.

molecule: total RNA

organism: Mus musculus

source_name: distal lung

extract_protocol:
no extraction
scRNA-Seq: plate-based illumina-compatible Tn5 transposase single cell RNA-Seq

tag: tissue

value: distal lung

tag: sequencing run

tag: gender

value: M

tag: plate

tag: well

tag: timepoint

tag: cell type

value: endothelial

tag: cell subtype

value: Nonproliferative embryonic EC

tag: mousename

tag: coverage

tag: number of genes

tag: treatment

value: normal


title: M_P7_normal_CD31_1_DC30_I19

value: Proliferative EC


title: M_E18.5_normal_CD31_1_DC30_D23


title: M_P7_normal_CD31_1_DC30_A22

value: Early Car4- capillaries


title: M_P21_normal_CD31_1_DC30_P5

value: Late Car4- capillaries


title: M_P7_normal_CD31_1_DC30_O16


title: M_P21_normal_CD31_1_DC30_N8

value: Car4+ capillaries


title: M_E18.5_normal_CD31_1_DC30_J14


title: M_E18.5_normal_CD31_1_DC30_N10


title: M_P7_normal_CD31_1_DC30_J13


title: M_P7_normal_CD31_1_DC30_I20


title: M_P7_normal_CD31_1_DC30_E2


title: M_P7_normal_CD31_1_DC30_E22


title: M_P21_normal_CD31_1_DC30_I15


title: M_E18.5_normal_CD31_1_DC30_H14


title: M_P7_normal_CD31_1_DC30_J20


title: M_E18.5_normal_CD31_1_DC30_I21


title: M_P21_normal_CD31_1_DC30_P9


title: M_P21_normal_CD31_1_DC30_E17


title: M_P21_normal_CD31_1_DC30_D9


title: M_P7_normal_CD31_1_DC30_F7


title: M_P21_normal_CD31_1_DC30_N6


title: M_P21_normal_CD31_1_DC30_H14


title: M_P21_normal_CD31_1_DC30_K1


title: M_P21_normal_CD31_1_DC30_M22


title: M_P21_normal_CD31_1_DC30_F5


title: M_P21_normal_CD31_1_DC30_P1


title: M_P21_normal_CD31_1_DC30_D16


title: M_P7_normal_CD31_1_DC30_C12


title: M_E18.5_normal_CD31_1_DC30_I20


title: M_P7_normal_CD31_1_DC30_I9


title: M_P7_normal_CD31_1_DC30_K6


title: M_P21_normal_CD31_1_DC30_G3


title: M_E18.5_normal_CD31_1_DC30_H21


title: M_E18.5_normal_CD31_1_DC30_B2


title: M_P7_normal_CD31_1_DC30_L22


title: M_P21_normal_CD31_1_DC30_H21


title: M_P7_normal_CD31_1_DC30_N14


title: M_P21_normal_CD31_1_DC30_O2


title: M_P7_normal_CD31_1_DC30_E7


title: M_E18.5_normal_CD31_1_DC30_D18


title: M_P21_normal_CD31_1_DC30_J21


title: M_P21_normal_CD31_1_DC30_F7


title: M_P7_normal_CD31_1_DC30_F23


title: M_P7_normal_CD31_1_DC30_B18


title: M_E18.5_normal_CD31_1_DC30_N1


title: M_P7_normal_CD31_1_DC30_A14


title: M_E18.5_normal_CD31_1_DC30_B17


title: M_P7_normal_CD31_1_DC30_I4

value: Arterial EC I


title: M_P7_normal_CD31_1_DC30_N6


title: M_E18.5_normal_CD31_1_DC30_B23


title: M_P7_normal_CD31_1_DC30_K21


title: M_E18.5_normal_CD31_1_DC30_O4


title: M_P21_normal_CD31_1_DC30_M7


title: M_P7_normal_CD31_1_DC30_F2


title: M_P7_normal_CD31_1_DC30_K15


title: M_E18.5_normal_CD31_1_DC30_A14


title: M_P21_normal_CD31_1_DC30_C6


title: M_E18.5_normal_CD31_1_DC30_O5


title: M_P7_normal_CD31_1_DC30_K7


title: M_E18.5_normal_CD31_1_DC30_L10


title: M_E18.5_normal_CD31_1_DC30_K5


title: M_P21_normal_CD31_1_DC30_J20


title: M_P7_normal_CD31_1_DC30_M4


title: M_E18.5_normal_CD31_1_DC30_G4


title: M_E18.5_normal_CD31_1_DC30_O18

value: Venous EC


title: M_E18.5_normal_CD31_1_DC30_H9


title: M_P7_normal_CD31_1_DC30_F13


title: M_E18.5_normal_CD31_1_DC30_O2


title: M_P7_normal_CD31_1_DC30_G14


title: M_E18.5_normal_CD31_1_DC30_L23


title: M_P7_normal_CD31_1_DC30_A8


title: M_P7_normal_CD31_1_DC30_D12


title: M_E18.5_normal_CD31_1_DC30_D11


title: M_P21_normal_CD31_1_DC30_C17


title: M_E18.5_normal_CD31_1_DC30_J2


title: M_E18.5_normal_CD31_1_DC30_C21


title: M_E18.5_normal_CD31_1_DC30_C13


title: M_E18.5_normal_CD31_1_DC30_I23


title: M_E18.5_normal_CD31_1_DC30_A16


title: M_P21_normal_CD31_1_DC30_J16


title: M_P21_normal_CD31_1_DC30_E16


title: M_P7_normal_CD31_1_DC30_H19


title: M_P21_normal_CD31_1_DC30_K10


title: M_E18.5_normal_CD31_1_DC30_M12


title: M_E18.5_normal_CD31_1_DC30_G21


title: M_E18.5_normal_CD31_1_DC30_A5


title: M_P7_normal_CD31_1_DC30_F17


title: M_P21_normal_CD31_1_DC30_I6


title: M_P7_normal_CD31_1_DC30_D4

value: Arterial EC II


title: M_E18.5_normal_CD31_1_DC30_P8


title: M_E18.5_normal_CD31_1_DC30_J18


title: M_P21_normal_CD31_1_DC30_D8


title: M_E18.5_normal_CD31_1_DC30_L8


title: M_P7_normal_CD31_1_DC30_B14


title: M_P21_normal_CD31_1_DC30_L2


title: M_P21_normal_CD31_1_DC30_L3


title: M_P21_normal_CD31_1_DC30_B5


title: M_P21_normal_CD31_1_DC30_J13


title: M_E18.5_normal_CD31_1_DC30_M18


title: M_E18.5_normal_CD31_1_DC30_M6


title: M_P21_normal_CD31_1_DC30_B19


title: M_E18.5_normal_CD31_1_DC30_G18


title: M_E18.5_normal_CD31_1_DC30_D14


title: M_P7_normal_CD31_1_DC30_D6


title: M_P21_normal_CD31_1_DC30_N2


title: M_E18.5_normal_CD31_1_DC30_E1


title: M_P7_normal_CD31_1_DC30_M18


title: M_E18.5_normal_CD31_1_DC30_G19


title: M_P21_normal_CD31_1_DC30_J3


title: M_P21_normal_CD31_1_DC30_N12


title: M_E18.5_normal_CD31_1_DC30_M2


title: M_P7_normal_CD31_1_DC30_L6


title: M_E18.5_normal_CD31_1_DC30_M14


title: M_P7_normal_CD31_1_DC30_M7


title: M_P7_normal_CD31_1_DC30_O20


title: M_P21_normal_CD31_1_DC30_G17


title: M_P7_normal_CD31_1_DC30_B19


title: M_E18.5_normal_CD31_1_DC30_N8


title: M_E18.5_normal_CD31_1_DC30_M8


title: M_P21_normal_CD31_1_DC30_D22


title: M_E18.5_normal_CD31_1_DC30_C20


title: M_E18.5_normal_CD31_1_DC30_K21


title: M_P21_normal_CD31_1_DC30_I17


title: M_E18.5_normal_CD31_1_DC30_O11


title: M_P7_normal_CD31_1_DC30_I22


title: M_P7_normal_CD31_1_DC30_B21


title: M_P7_normal_CD31_1_DC30_G7


title: M_E18.5_normal_CD31_1_DC30_I6


title: M_E18.5_normal_CD31_1_DC30_J13


title: M_P21_normal_CD31_1_DC30_I3


title: M_P7_normal_CD31_1_DC30_A11


title: M_E18.5_normal_CD31_1_DC30_K11


title: M_E18.5_normal_CD31_1_DC30_B1


title: M_P21_normal_CD31_1_DC30_L4


title: M_E18.5_normal_CD31_1_DC30_E6


title: M_P21_normal_CD31_1_DC30_C12


title: M_P7_normal_CD31_1_DC30_G10


title: M_P7_normal_CD31_1_DC30_L15


title: M_P21_normal_CD31_1_DC30_O9


title: M_E18.5_normal_CD31_1_DC30_G13


title: M_P7_normal_CD31_1_DC30_J10


title: M_E18.5_normal_CD31_1_DC30_E7


title: M_P7_normal_CD31_1_DC30_G8


title: M_E18.5_normal_CD31_1_DC30_C23


title: M_P7_normal_CD31_1_DC30_G20

value: Lymphatic EC


title: M_P7_normal_CD31_1_DC30_C18


title: M_P7_normal_CD31_1_DC30_I8


title: M_P21_normal_CD31_1_DC30_J8


title: M_P7_normal_CD31_1_DC30_O12


title: M_P21_normal_CD31_1_DC30_N16


title: M_E18.5_normal_CD31_1_DC30_H19


title: M_P21_normal_CD31_1_DC30_P12


title: M_E18.5_normal_CD31_1_DC30_G14


title: M_E18.5_normal_CD31_1_DC30_D8


title: M_E18.5_normal_CD31_1_DC30_P18


title: M_P21_normal_CD31_1_DC30_L15


title: M_P7_normal_CD31_1_DC30_P8


title: M_P21_normal_CD31_1_DC30_K2


title: M_P7_normal_CD31_1_DC30_A6


title: M_P21_normal_CD31_1_DC30_N23


title: M_E18.5_normal_CD31_1_DC30_D7


title: M_E18.5_normal_CD31_1_DC30_L2


title: M_P7_normal_CD31_1_DC30_E5


title: M_E18.5_normal_CD31_1_DC30_N9


title: M_P21_normal_CD31_1_DC30_L22


title: M_E18.5_normal_CD31_1_DC30_J23


title: M_E18.5_normal_CD31_1_DC30_G20


title: M_P7_normal_CD31_1_DC30_G2


title: M_P21_normal_CD31_1_DC30_N14


title: M_E18.5_normal_CD31_1_DC30_M15


title: M_E18.5_normal_CD31_1_DC30_I13


title: M_E18.5_normal_CD31_1_DC30_I10


title: M_E18.5_normal_CD31_1_DC30_I11


title: M_P7_normal_CD31_1_DC30_P20


title: M_E18.5_normal_CD31_1_DC30_D20


title: M_P21_normal_CD31_1_DC30_H13


title: M_P21_normal_CD31_1_DC30_G1


title: M_E18.5_normal_CD31_1_DC30_H10


title: M_P7_normal_CD31_1_DC30_K1


title: M_E18.5_normal_CD31_1_DC30_N14


title: M_P21_normal_CD31_1_DC30_B21


title: M_E18.5_normal_CD31_1_DC30_M7


title: M_P21_normal_CD31_1_DC30_K14


title: M_P7_normal_CD31_1_DC30_B5


title: M_E18.5_normal_CD31_1_DC30_F6


title: M_P7_normal_CD31_1_DC30_H13


title: M_P21_normal_CD31_1_DC30_C3


title: M_P21_normal_CD31_1_DC30_B23


title: M_E18.5_normal_CD31_1_DC30_D21


title: M_P7_normal_CD31_1_DC30_P9


title: M_P21_normal_CD31_1_DC30_N22


title: M_E18.5_normal_CD31_1_DC30_F22


title: M_P21_normal_CD31_1_DC30_A15


title: M_P21_normal_CD31_1_DC30_M8


title: M_P21_normal_CD31_1_DC30_F17


title: M_P21_normal_CD31_1_DC30_E13


title: M_E18.5_normal_CD31_1_DC30_M5


title: M_P21_normal_CD31_1_DC30_P3


title: M_P21_normal_CD31_1_DC30_K20


title: M_P21_normal_CD31_1_DC30_J11


title: M_E18.5_normal_CD31_1_DC30_A11


title: M_E18.5_normal_CD31_1_DC30_A7


title: M_P7_normal_CD31_1_DC30_K20


title: M_P21_normal_CD31_1_DC30_G7


title: M_E18.5_normal_CD31_1_DC30_P23


title: M_E18.5_normal_CD31_1_DC30_D9


title: M_P21_normal_CD31_1_DC30_E2


title: M_E18.5_normal_CD31_1_DC30_K18


title: M_P7_normal_CD31_1_DC30_A4


title: M_E18.5_normal_CD31_1_DC30_K8


title: M_P21_normal_CD31_1_DC30_L19


title: M_E18.5_normal_CD31_1_DC30_C5


title: M_P21_normal_CD31_1_DC30_F1


title: M_P7_normal_CD31_1_DC30_F6


title: M_P21_normal_CD31_1_DC30_G5


title: M_P21_normal_CD31_1_DC30_N4


title: M_P21_normal_CD31_1_DC30_L5


title: M_E18.5_normal_CD31_1_DC30_M13


title: M_P7_normal_CD31_1_DC30_K11


title: M_E18.5_normal_CD31_1_DC30_I14


title: M_P21_normal_CD31_1_DC30_B2


title: M_P7_normal_CD31_1_DC30_J21


title: M_P21_normal_CD31_1_DC30_E10


title: M_P21_normal_CD31_1_DC30_D5


title: M_E18.5_normal_CD31_1_DC30_A17


title: M_E18.5_normal_CD31_1_DC30_C1


title: M_P21_normal_CD31_1_DC30_C8


title: M_E18.5_normal_CD31_1_DC30_L22


title: M_E18.5_normal_CD31_1_DC30_N13


title: M_P21_normal_CD31_1_DC30_A7


title: M_P7_normal_CD31_1_DC30_G12


title: M_P21_normal_CD31_1_DC30_B18


title: M_P7_normal_CD31_1_DC30_N1


title: M_P7_normal_CD31_1_DC30_G19


title: M_P21_normal_CD31_1_DC30_C5


title: M_E18.5_normal_CD31_1_DC30_H6


title: M_P21_normal_CD31_1_DC30_M5


title: M_E18.5_normal_CD31_1_DC30_J10


title: M_P21_normal_CD31_1_DC30_H5


title: M_P21_normal_CD31_1_DC30_J14


title: M_P21_normal_CD31_1_DC30_P13


title: M_E18.5_normal_CD31_1_DC30_E8


title: M_P21_normal_CD31_1_DC30_G13


title: M_E18.5_normal_CD31_1_DC30_I9


title: M_P7_normal_CD31_1_DC30_B11


title: M_E18.5_normal_CD31_1_DC30_N12


title: M_P21_normal_CD31_1_DC30_G20


title: M_P21_normal_CD31_1_DC30_C4


title: M_P7_normal_CD31_1_DC30_M3


title: M_P21_normal_CD31_1_DC30_O23


title: M_P21_normal_CD31_1_DC30_A9


title: M_P21_normal_CD31_1_DC30_F14


title: M_P7_normal_CD31_1_DC30_G3


title: M_P7_normal_CD31_1_DC30_E14


title: M_P7_normal_CD31_1_DC30_I21


title: M_E18.5_normal_CD31_1_DC30_B9


title: M_P7_normal_CD31_1_DC30_D11


title: M_P7_normal_CD31_1_DC30_P23


title: M_P21_normal_CD31_1_DC30_O10


title: M_P21_normal_CD31_1_DC30_B7


title: M_E18.5_normal_CD31_1_DC30_K17


title: M_P21_normal_CD31_1_DC30_D23


title: M_P7_normal_CD31_1_DC30_E20


title: M_P21_normal_CD31_1_DC30_M3


title: M_P21_normal_CD31_1_DC30_J15


title: M_E18.5_normal_CD31_1_DC30_K12


title: M_E18.5_normal_CD31_1_DC30_F2


title: M_P21_normal_CD31_1_DC30_C16


title: M_E18.5_normal_CD31_1_DC30_L3


title: M_E18.5_normal_CD31_1_DC30_G8


title: M_E18.5_normal_CD31_1_DC30_D10


title: M_P21_normal_CD31_1_DC30_G21


title: M_E18.5_normal_CD31_1_DC30_K3


title: M_E18.5_normal_CD31_1_DC30_K7


title: M_P7_normal_CD31_1_DC30_B20


title: M_P7_normal_CD31_1_DC30_I2


title: M_P21_normal_CD31_1_DC30_A17


title: M_E18.5_normal_CD31_1_DC30_O17


title: M_P7_normal_CD31_1_DC30_M2


title: M_E18.5_normal_CD31_1_DC30_O1


title: M_P7_normal_CD31_1_DC30_E10


title: M_E18.5_normal_CD31_1_DC30_O14


title: M_P21_normal_CD31_1_DC30_N15


title: M_E18.5_normal_CD31_1_DC30_E17


title: M_P21_normal_CD31_1_DC30_E11


title: M_E18.5_normal_CD31_1_DC30_H18


title: M_E18.5_normal_CD31_1_DC30_B22


title: M_E18.5_normal_CD31_1_DC30_F5


title: M_P21_normal_CD31_1_DC30_I8


title: M_P21_normal_CD31_1_DC30_B16


title: M_P21_normal_CD31_1_DC30_A3


title: M_P21_normal_CD31_1_DC30_H4


title: M_P21_normal_CD31_1_DC30_D12


title: M_P7_normal_CD31_1_DC30_P11


title: M_P7_normal_CD31_1_DC30_I18


title: M_P21_normal_CD31_1_DC30_F16


title: M_P21_normal_CD31_1_DC30_F2


title: M_P7_normal_CD31_1_DC30_H6


title: M_E18.5_normal_CD31_1_DC30_D19


title: M_P21_normal_CD31_1_DC30_L14


title: M_E18.5_normal_CD31_1_DC30_J15


title: M_P21_normal_CD31_1_DC30_K13


title: M_P7_normal_CD31_1_DC30_C11


title: M_P21_normal_CD31_1_DC30_C2


title: M_E18.5_normal_CD31_1_DC30_F13


title: M_P7_normal_CD31_1_DC30_N13


title: M_P21_normal_CD31_1_DC30_E5


title: M_E18.5_normal_CD31_1_DC30_D5


title: M_P7_normal_CD31_1_DC30_M20


title: M_E18.5_normal_CD31_1_DC30_E16


title: M_P7_normal_CD31_1_DC30_E9


title: M_P21_normal_CD31_1_DC30_I20


title: M_P7_normal_CD31_1_DC30_M19


title: M_E18.5_normal_CD31_1_DC30_K9


title: M_P7_normal_CD31_1_DC30_L12


title: M_E18.5_normal_CD31_1_DC30_A12


title: M_P7_normal_CD31_1_DC30_D13


title: M_E18.5_normal_CD31_1_DC30_B12


title: M_E18.5_normal_CD31_1_DC30_F9


title: M_P7_normal_CD31_1_DC30_J9


title: M_P21_normal_CD31_1_DC30_E22


title: M_E18.5_normal_CD31_1_DC30_L13


title: M_P21_normal_CD31_1_DC30_G11


title: M_E18.5_normal_CD31_1_DC30_F15


title: M_E18.5_normal_CD31_1_DC30_P9


title: M_P7_normal_CD31_1_DC30_J11


title: M_P21_normal_CD31_1_DC30_K19


title: M_E18.5_normal_CD31_1_DC30_H2


title: M_E18.5_normal_CD31_1_DC30_K16


title: M_P21_normal_CD31_1_DC30_C7


title: M_E18.5_normal_CD31_1_DC30_E22


title: M_P7_normal_CD31_1_DC30_G13


title: M_E18.5_normal_CD31_1_DC30_L5


title: M_P7_normal_CD31_1_DC30_O21


title: M_P21_normal_CD31_1_DC30_A18


title: M_P21_normal_CD31_1_DC30_A21


title: M_E18.5_normal_CD31_1_DC30_A8


title: M_P21_normal_CD31_1_DC30_H10


title: M_E18.5_normal_CD31_1_DC30_J22


title: M_P21_normal_CD31_1_DC30_P7


title: M_P21_normal_CD31_1_DC30_I11


title: M_P21_normal_CD31_1_DC30_D10


title: M_P21_normal_CD31_1_DC30_I22


title: M_E18.5_normal_CD31_1_DC30_B19


title: M_P7_normal_CD31_1_DC30_M23


title: M_E18.5_normal_CD31_1_DC30_H11


title: M_P21_normal_CD31_1_DC30_K17


title: M_E18.5_normal_CD31_1_DC30_I16


title: M_E18.5_normal_CD31_1_DC30_E2


title: M_P21_normal_CD31_1_DC30_B17


title: M_E18.5_normal_CD31_1_DC30_P5


title: M_E18.5_normal_CD31_1_DC30_C22


title: M_P21_normal_CD31_1_DC30_H6


title: M_E18.5_normal_CD31_1_DC30_C7


title: M_P7_normal_CD31_1_DC30_D23


title: M_P21_normal_CD31_1_DC30_K3


title: M_E18.5_normal_CD31_1_DC30_L20


title: M_E18.5_normal_CD31_1_DC30_D4


title: M_P21_normal_CD31_1_DC30_D18


title: M_E18.5_normal_CD31_1_DC30_H13


title: M_E18.5_normal_CD31_1_DC30_I8


title: M_P7_normal_CD31_1_DC30_J16


title: M_P7_normal_CD31_1_DC30_G17


title: M_P21_normal_CD31_1_DC30_L17


title: M_P7_normal_CD31_1_DC30_H7


title: M_P21_normal_CD31_1_DC30_J17


title: M_E18.5_normal_CD31_1_DC30_A21


title: M_E18.5_normal_CD31_1_DC30_G3


title: M_P7_normal_CD31_1_DC30_P18


title: M_E18.5_normal_CD31_1_DC30_J8


title: M_P21_normal_CD31_1_DC30_J6


title: M_P7_normal_CD31_1_DC30_I16


title: M_P21_normal_CD31_1_DC30_N7


title: M_E18.5_normal_CD31_1_DC30_D15


title: M_P21_normal_CD31_1_DC30_P23


title: M_P21_normal_CD31_1_DC30_C19


title: M_P7_normal_CD31_1_DC30_H2


title: M_P7_normal_CD31_1_DC30_P6


title: M_E18.5_normal_CD31_1_DC30_E11


title: M_P7_normal_CD31_1_DC30_H9


title: M_E18.5_normal_CD31_1_DC30_M10


title: M_E18.5_normal_CD31_1_DC30_L7


title: M_E18.5_normal_CD31_1_DC30_P21


title: M_E18.5_normal_CD31_1_DC30_I5


title: M_E18.5_normal_CD31_1_DC30_J19


title: M_E18.5_normal_CD31_1_DC30_B13


title: M_P21_normal_CD31_1_DC30_L9


title: M_E18.5_normal_CD31_1_DC30_H20


title: M_E18.5_normal_CD31_1_DC30_H15


title: M_E18.5_normal_CD31_1_DC30_O6


title: M_P21_normal_CD31_1_DC30_M4


title: M_P7_normal_CD31_1_DC30_O11


title: M_E18.5_normal_CD31_1_DC30_L16


title: M_P21_normal_CD31_1_DC30_A11


title: M_E18.5_normal_CD31_1_DC30_F23


title: M_E18.5_normal_CD31_1_DC30_N11


title: M_P21_normal_CD31_1_DC30_J19


title: M_P21_normal_CD31_1_DC30_O7


title: M_P21_normal_CD31_1_DC30_I16


title: M_E18.5_normal_CD31_1_DC30_K13


title: M_E18.5_normal_CD31_1_DC30_B8


title: M_P7_normal_CD31_1_DC30_I13


title: M_E18.5_normal_CD31_1_DC30_J11


title: M_P7_normal_CD31_1_DC30_J8


title: M_P7_normal_CD31_1_DC30_B22


title: M_E18.5_normal_CD31_1_DC30_J16


title: M_P7_normal_CD31_1_DC30_N17


title: M_P7_normal_CD31_1_DC30_J7


title: M_P21_normal_CD31_1_DC30_O11


title: M_P7_normal_CD31_1_DC30_P19


title: M_E18.5_normal_CD31_1_DC30_C14


title: M_P7_normal_CD31_1_DC30_J4


title: M_E18.5_normal_CD31_1_DC30_L9


title: M_E18.5_normal_CD31_1_DC30_A23


title: M_E18.5_normal_CD31_1_DC30_N20


title: M_P21_normal_CD31_1_DC30_B1


title: M_P21_normal_CD31_1_DC30_O4


title: M_E18.5_normal_CD31_1_DC30_H22


title: M_P7_normal_CD31_1_DC30_D16


title: M_P21_normal_CD31_1_DC30_I1


title: M_P7_normal_CD31_1_DC30_K10


title: M_P7_normal_CD31_1_DC30_E1


title: M_P7_normal_CD31_1_DC30_A16


title: M_P21_normal_CD31_1_DC30_C21


title: M_P7_normal_CD31_1_DC30_B13


title: M_P21_normal_CD31_1_DC30_K11


title: M_P7_normal_CD31_1_DC30_F11


title: M_E18.5_normal_CD31_1_DC30_K22


title: M_P21_normal_CD31_1_DC30_P15


title: M_E18.5_normal_CD31_1_DC30_G10


title: M_P21_normal_CD31_1_DC30_N5


title: M_E18.5_normal_CD31_1_DC30_P7


title: M_E18.5_normal_CD31_1_DC30_A18


title: M_P7_normal_CD31_1_DC30_G11


title: M_E18.5_normal_CD31_1_DC30_C11


title: M_E18.5_normal_CD31_1_DC30_L21


title: M_E18.5_normal_CD31_1_DC30_L14


title: M_P7_normal_CD31_1_DC30_C17


title: M_P7_normal_CD31_1_DC30_I6


title: M_E18.5_normal_CD31_1_DC30_G12


title: M_P21_normal_CD31_1_DC30_H9


title: M_P21_normal_CD31_1_DC30_H11


title: M_P21_normal_CD31_1_DC30_M17


title: M_P21_normal_CD31_1_DC30_H3


title: M_P21_normal_CD31_1_DC30_G14


title: M_P7_normal_CD31_1_DC30_O5


title: M_P21_normal_CD31_1_DC30_L10


title: M_P7_normal_CD31_1_DC30_N8


title: M_P21_normal_CD31_1_DC30_A14


title: M_E18.5_normal_CD31_1_DC30_M9


title: M_P21_normal_CD31_1_DC30_A1


title: M_E18.5_normal_CD31_1_DC30_G22


title: M_E18.5_normal_CD31_1_DC30_H23


title: M_P7_normal_CD31_1_DC30_A10


title: M_P7_normal_CD31_1_DC30_D8


title: M_E18.5_normal_CD31_1_DC30_F8


title: M_P7_normal_CD31_1_DC30_D1


title: M_P7_normal_CD31_1_DC30_D14


title: M_E18.5_normal_CD31_1_DC30_I18


title: M_P21_normal_CD31_1_DC30_O17


title: M_E18.5_normal_CD31_1_DC30_N4


title: M_P7_normal_CD31_1_DC30_O6


title: M_E18.5_normal_CD31_1_DC30_N22


title: M_E18.5_normal_CD31_1_DC30_B15


title: M_E18.5_normal_CD31_1_DC30_C6


title: M_P21_normal_CD31_1_DC30_M2


title: M_P7_normal_CD31_1_DC30_G18


title: M_P7_normal_CD31_1_DC30_P13


title: M_P21_normal_CD31_1_DC30_A13


title: M_E18.5_normal_CD31_1_DC30_K23


title: M_E18.5_normal_CD31_1_DC30_H3


title: M_P21_normal_CD31_1_DC30_C23


title: M_P7_normal_CD31_1_DC30_M15


title: M_E18.5_normal_CD31_1_DC30_B16


title: M_P7_normal_CD31_1_DC30_B23


title: M_P7_normal_CD31_1_DC30_F10


title: M_P21_normal_CD31_1_DC30_K16


title: M_P7_normal_CD31_1_DC30_E21


title: M_P21_normal_CD31_1_DC30_G2


title: M_E18.5_normal_CD31_1_DC30_E19


title: M_E18.5_normal_CD31_1_DC30_N15


title: M_P7_normal_CD31_1_DC30_N11


title: M_P7_normal_CD31_1_DC30_A23


title: M_E18.5_normal_CD31_1_DC30_K10


title: M_P21_normal_CD31_1_DC30_A4


title: M_E18.5_normal_CD31_1_DC30_N7


title: M_P7_normal_CD31_1_DC30_E11


title: M_E18.5_normal_CD31_1_DC30_E10


title: M_E18.5_normal_CD31_1_DC30_E18


title: M_P21_normal_CD31_1_DC30_D4


title: M_E18.5_normal_CD31_1_DC30_G11


title: M_E18.5_normal_CD31_1_DC30_D17


title: M_E18.5_normal_CD31_1_DC30_B10


title: M_P7_normal_CD31_1_DC30_M8


title: M_P7_normal_CD31_1_DC30_B6


title: M_P7_normal_CD31_1_DC30_D7


title: M_E18.5_normal_CD31_1_DC30_C15


title: M_P7_normal_CD31_1_DC30_K22


title: M_E18.5_normal_CD31_1_DC30_F3


title: M_P21_normal_CD31_1_DC30_E4


title: M_E18.5_normal_CD31_1_DC30_K19


title: M_P7_normal_CD31_1_DC30_O9


title: M_P7_normal_CD31_1_DC30_A13


title: M_E18.5_normal_CD31_1_DC30_A20


title: M_P7_normal_CD31_1_DC30_O17


title: M_P21_normal_CD31_1_DC30_F20


title: M_P7_normal_CD31_1_DC30_D20


title: M_P21_normal_CD31_1_DC30_M21


title: M_P21_normal_CD31_1_DC30_K9


title: M_E18.5_normal_CD31_1_DC30_H7


title: M_E18.5_normal_CD31_1_DC30_K1


title: M_P7_normal_CD31_1_DC30_L2


title: M_P7_normal_CD31_1_DC30_H1


title: M_P21_normal_CD31_1_DC30_K15


title: M_E18.5_normal_CD31_1_DC30_H12


title: M_P7_normal_CD31_1_DC30_P21


title: M_P7_normal_CD31_1_DC30_H11


title: M_P7_normal_CD31_1_DC30_O8


title: M_P7_normal_CD31_1_DC30_E17


title: M_E18.5_normal_CD31_1_DC30_J7


title: M_P21_normal_CD31_1_DC30_M11


title: M_E18.5_normal_CD31_1_DC30_P19


title: M_E18.5_normal_CD31_1_DC30_I2


title: M_E18.5_normal_CD31_1_DC30_E12


title: M_E18.5_normal_CD31_1_DC30_M17


title: M_E18.5_normal_CD31_1_DC30_B3


title: M_E18.5_normal_CD31_1_DC30_E15


title: M_E18.5_normal_CD31_1_DC30_O8


title: M_P21_normal_CD31_1_DC30_J7


title: M_P21_normal_CD31_1_DC30_M14


title: M_E18.5_normal_CD31_1_DC30_C3


title: M_P7_normal_CD31_1_DC30_D15


title: M_P7_normal_CD31_1_DC30_J15


title: M_E18.5_normal_CD31_1_DC30_M11


title: M_E18.5_normal_CD31_1_DC30_G7


title: M_P21_normal_CD31_1_DC30_F13


title: M_P21_normal_CD31_1_DC30_H16


title: M_P21_normal_CD31_1_DC30_O14


title: M_P21_normal_CD31_1_DC30_C22


title: M_E18.5_normal_CD31_1_DC30_A22


title: M_P7_normal_CD31_1_DC30_C5


title: M_P21_normal_CD31_1_DC30_B3


title: M_E18.5_normal_CD31_1_DC30_M3


title: M_P7_normal_CD31_1_DC30_J3


title: M_E18.5_normal_CD31_1_DC30_L19


title: M_P21_normal_CD31_1_DC30_D13


title: M_P7_normal_CD31_1_DC30_N12


title: M_P21_normal_CD31_1_DC30_I23


title: M_P21_normal_CD31_1_DC30_M1


title: M_P21_normal_CD31_1_DC30_F15


title: M_E18.5_normal_CD31_1_DC30_I15


title: M_P21_normal_CD31_1_DC30_O12


title: M_P7_normal_CD31_1_DC30_B4


title: M_P21_normal_CD31_1_DC30_M20


title: M_P21_normal_CD31_1_DC30_K12


title: M_E18.5_normal_CD31_1_DC30_D22


title: M_E18.5_normal_CD31_1_DC30_P20


title: M_E18.5_normal_CD31_1_DC30_C18


title: M_P21_normal_CD31_1_DC30_F9


title: M_P7_normal_CD31_1_DC30_N9


title: M_P21_normal_CD31_1_DC30_L7


title: M_E18.5_normal_CD31_1_DC30_M23


title: M_P21_normal_CD31_1_DC30_P10


title: M_P7_normal_CD31_1_DC30_C9


title: M_E18.5_normal_CD31_1_DC30_O15


title: M_P21_normal_CD31_1_DC30_K6


title: M_P21_normal_CD31_1_DC30_B4


title: M_P7_normal_CD31_1_DC30_J6


title: M_E18.5_normal_CD31_1_DC30_E13


title: M_P21_normal_CD31_1_DC30_F18


title: M_P21_normal_CD31_1_DC30_O5


title: M_P21_normal_CD31_1_DC30_J5


title: M_P21_normal_CD31_1_DC30_L23


title: M_E18.5_normal_CD31_1_DC30_A4


title: M_P21_normal_CD31_1_DC30_G6


title: M_P21_normal_CD31_1_DC30_J1


title: M_P7_normal_CD31_1_DC30_G15


title: M_P7_normal_CD31_1_DC30_E3


title: M_P21_normal_CD31_1_DC30_H12


title: M_E18.5_normal_CD31_1_DC30_P14


title: M_P7_normal_CD31_1_DC30_A9


title: M_P7_normal_CD31_1_DC30_K13


title: M_P7_normal_CD31_1_DC30_M14


title: M_P21_normal_CD31_1_DC30_M16


title: M_P7_normal_CD31_1_DC30_K19


title: M_P21_normal_CD31_1_DC30_E19


title: M_P7_normal_CD31_1_DC30_G9


title: M_P21_normal_CD31_1_DC30_F22


title: M_E18.5_normal_CD31_1_DC30_B21


title: F_E18.5_normal_mesench_2_DC25_D23

value: F


title: F_E18.5_normal_CD31_1_DC23_I20


title: M_E18.5_normal_CD31_1_DC30_K6


title: M_P21_normal_CD31_1_DC30_C14


title: F_P1_normal_CD31_1_DC23_N6


title: F_P1_normal_CD31_1_DC23_E3


title: F_P21_normal_CD31_1_DC23_P22


title: F_E18.5_normal_CD31_1_DC23_E5


title: F_P21_normal_CD31_1_DC23_C23


title: F_P21_normal_CD31_1_DC23_O4


title: M_E18.5_normal_CD31_1_DC30_D2


title: F_E18.5_normal_mesench_1_DC25_M2


title: F_E18.5_normal_CD31_1_DC23_B13


title: F_P1_normal_CD31_1_DC23_D21


title: F_E18.5_normal_CD31_1_DC23_H12


title: F_P1_normal_CD31_1_DC23_I19


title: F_P1_normal_CD31_1_DC23_L8


title: F_P21_normal_CD31_1_DC23_L21


title: F_P21_normal_CD31_1_DC23_C3


title: F_E18.5_normal_CD31_1_DC23_N6


title: F_E18.5_normal_CD31_1_DC23_M20


title: F_P21_normal_CD31_1_DC23_D17


title: F_E18.5_normal_CD31_1_DC23_K3


title: F_P21_normal_CD31_1_DC23_P10


title: F_E18.5_normal_CD31_1_DC23_O6


title: F_E18.5_normal_CD31_1_DC23_G5


title: F_P21_normal_CD31_1_DC23_B8


title: F_P1_normal_CD31_1_DC23_E15


title: F_P1_normal_CD31_1_DC23_N11


title: F_P21_normal_CD31_1_DC23_G2


title: F_P21_normal_CD31_1_DC23_A13


title: F_P21_normal_CD31_1_DC23_M16


title: F_P21_normal_CD31_1_DC23_M13


title: F_E18.5_normal_CD31_1_DC23_J16


title: F_P21_normal_CD31_1_DC23_N1


title: F_P21_normal_CD31_1_DC23_H15


title: F_P21_normal_CD31_1_DC23_P15


title: F_E18.5_normal_CD31_1_DC23_P10


title: F_E18.5_normal_CD31_1_DC23_N16


title: F_E18.5_normal_CD31_1_DC23_B15


title: F_P1_normal_CD31_1_DC23_A22


title: F_P1_normal_CD31_1_DC23_O13


title: F_P1_normal_CD31_1_DC23_K19


title: F_P21_normal_CD31_1_DC23_A10


title: F_P21_normal_CD31_1_DC23_B22


title: F_E18.5_normal_CD31_1_DC23_E23


title: F_P1_normal_CD31_1_DC23_F20


title: F_E18.5_normal_CD31_1_DC23_J11


title: F_P1_normal_CD31_1_DC23_J14


title: F_E18.5_normal_CD31_1_DC23_C8


title: F_E18.5_normal_CD31_1_DC23_A22


title: F_E18.5_normal_CD31_1_DC23_P4


title: F_P21_normal_CD31_1_DC23_K15


title: F_E18.5_normal_CD31_1_DC23_H2


title: F_P21_normal_CD31_1_DC23_E23


title: F_P21_normal_CD31_1_DC23_O3


title: F_P1_normal_CD31_1_DC23_M6


title: F_E18.5_normal_CD31_1_DC23_E2


title: F_P1_normal_CD31_1_DC23_I10


title: F_E18.5_normal_CD31_1_DC23_A19


title: F_P21_normal_CD31_1_DC23_B12


title: F_P1_normal_CD31_1_DC23_P10


title: F_P1_normal_CD31_1_DC23_F13


title: F_E18.5_normal_CD31_1_DC23_H5


title: F_E18.5_normal_CD31_1_DC23_E7


title: F_E18.5_normal_CD31_1_DC23_P8


title: F_E18.5_normal_CD31_1_DC23_J21


title: F_P1_normal_CD31_1_DC23_N14


title: F_E18.5_normal_CD31_1_DC23_J7


title: F_E18.5_normal_CD31_1_DC23_A7


title: F_P1_normal_CD31_1_DC23_G1


title: F_P21_normal_CD31_1_DC23_G7


title: F_P21_normal_CD31_1_DC23_K5


title: F_P21_normal_CD31_1_DC23_I2


title: F_E18.5_normal_CD31_1_DC23_I8


title: F_P1_normal_CD31_1_DC23_B4


title: F_E18.5_normal_CD31_1_DC23_G10


title: F_P1_normal_CD31_1_DC23_C20


title: F_P21_normal_CD31_1_DC23_K13


title: F_P1_normal_CD31_1_DC23_D9


title: F_P21_normal_CD31_1_DC23_K8


title: F_P1_normal_CD31_1_DC23_I9


title: F_P21_normal_CD31_1_DC23_P18


title: F_P21_normal_CD31_1_DC23_N2


title: F_P21_normal_CD31_1_DC23_E6


title: F_P21_normal_CD31_1_DC23_D11


title: F_P1_normal_CD45_1_DC23_D14


title: F_E18.5_normal_CD31_1_DC23_B23


title: F_P1_normal_CD31_1_DC23_K13


title: F_E18.5_normal_CD31_1_DC23_F3


title: F_E18.5_normal_CD31_1_DC23_M3


title: F_P1_normal_CD31_1_DC23_M19


title: F_P1_normal_CD31_1_DC23_H6


title: F_P21_normal_CD31_1_DC23_N12


title: F_P1_normal_CD31_1_DC23_N10


title: F_P21_normal_CD31_1_DC23_D16


title: F_E18.5_normal_CD31_1_DC23_F5


title: F_P21_normal_CD31_1_DC23_P17


title: F_E18.5_normal_CD31_1_DC23_I4


title: F_P1_normal_CD31_1_DC23_E11


title: F_E18.5_normal_CD31_1_DC23_O19


title: F_P21_normal_CD31_1_DC23_F7


title: F_E18.5_normal_CD31_1_DC23_B9


title: F_P21_normal_CD31_1_DC23_L3


title: F_P21_normal_CD31_1_DC23_E16


title: F_E18.5_normal_CD31_1_DC23_B11


title: F_P21_normal_CD31_1_DC23_H19


title: F_P1_normal_CD31_1_DC23_G2


title: F_P1_normal_CD31_1_DC23_M8


title: F_P21_normal_CD31_1_DC23_E2


title: F_P1_normal_CD31_1_DC23_L20


title: F_P1_normal_CD31_1_DC23_D4


title: F_P1_normal_CD31_1_DC23_F5


title: F_P1_normal_CD31_1_DC23_N2


title: F_E18.5_normal_CD31_1_DC23_J6


title: F_P21_normal_CD31_1_DC23_O9


title: F_P21_normal_CD31_1_DC23_K20


title: F_P21_normal_CD31_1_DC23_D7


title: F_P1_normal_CD31_1_DC23_K7


title: F_P21_normal_CD31_1_DC23_L7


title: F_E18.5_normal_CD31_1_DC23_O2


title: F_E18.5_normal_CD31_1_DC23_B3


title: F_E18.5_normal_CD31_1_DC23_M14


title: F_E18.5_normal_CD31_1_DC23_G20


title: F_P21_normal_CD31_1_DC23_L16


title: F_P1_normal_CD31_1_DC23_N18


title: F_P21_normal_CD31_1_DC23_F5


title: F_P1_normal_CD31_1_DC23_B9


title: F_E18.5_normal_CD31_1_DC23_E13


title: F_E18.5_normal_CD31_1_DC23_A16


title: F_P1_normal_CD31_1_DC23_L9


title: F_E18.5_normal_CD31_1_DC23_D11


title: F_P21_normal_CD31_1_DC23_P21


title: F_E18.5_normal_CD31_1_DC23_C18


title: F_P1_normal_CD31_1_DC23_K6


title: F_P1_normal_CD31_1_DC23_B14


title: F_E18.5_normal_CD31_1_DC23_J2


title: F_E18.5_normal_CD31_1_DC23_F1


title: F_P21_normal_CD31_1_DC23_C7


title: F_P21_normal_CD31_1_DC23_M10


title: F_P1_normal_CD31_1_DC23_M17


title: F_P21_normal_CD31_1_DC23_F6


title: F_P21_normal_CD31_1_DC23_P8


title: F_E18.5_normal_CD31_1_DC23_J9


title: F_P1_normal_CD31_1_DC23_F4


title: F_E18.5_normal_CD31_1_DC23_C2


title: F_E18.5_normal_CD31_1_DC23_L17


title: F_E18.5_normal_CD31_1_DC23_A11


title: F_P21_normal_CD31_1_DC23_B6


title: F_P1_normal_CD31_1_DC23_L23


title: F_E18.5_normal_CD31_1_DC23_D15


title: F_P21_normal_CD31_1_DC23_F13


title: F_P1_normal_CD31_1_DC23_G6


title: F_P21_normal_CD31_1_DC23_F14


title: F_P1_normal_CD31_1_DC23_N22


title: F_P1_normal_CD31_1_DC23_A20


title: F_P21_normal_CD31_1_DC23_P3


title: F_P1_normal_CD31_1_DC23_G16


title: F_P1_normal_CD31_1_DC23_G12


title: F_P1_normal_CD31_1_DC23_G14


title: F_P1_normal_CD31_1_DC23_B6


title: F_P21_normal_CD31_1_DC23_E5


title: F_E18.5_normal_CD31_1_DC23_M19


title: F_P1_normal_CD31_1_DC23_K21


title: F_P21_normal_CD45_1_DC23_M7


title: F_P1_normal_CD31_1_DC23_K14


title: F_E18.5_normal_CD31_1_DC23_O3


title: F_P21_normal_CD31_1_DC23_O12


title: F_P1_normal_CD31_1_DC23_K16


title: F_P21_normal_CD31_1_DC23_K1


title: F_P1_normal_CD31_1_DC23_A5


title: F_P21_normal_CD31_1_DC23_H6


title: F_P1_normal_CD31_1_DC23_B10


title: F_P21_normal_CD31_1_DC23_N18


title: F_E18.5_normal_CD31_1_DC23_I9


title: F_P1_normal_CD31_1_DC23_C13


title: F_P1_normal_CD31_1_DC23_P22


title: F_E18.5_normal_CD31_1_DC23_D1


title: F_P1_normal_CD31_1_DC23_H18


title: F_P1_normal_CD31_1_DC23_C19


title: F_P1_normal_CD31_1_DC23_M20


title: F_E18.5_normal_CD31_1_DC23_M10


title: F_E18.5_normal_CD31_1_DC23_J13


title: F_P1_normal_CD31_1_DC23_I23


title: F_P1_normal_CD31_1_DC23_C2


title: F_P21_normal_CD31_1_DC23_K4


title: F_P1_normal_CD31_1_DC23_K18


title: F_E18.5_normal_CD31_1_DC23_L4


title: F_P21_normal_CD31_1_DC23_A14


title: F_E18.5_normal_CD31_1_DC23_K2


title: F_E18.5_normal_CD31_1_DC23_D16


title: F_P1_normal_CD31_1_DC23_H14


title: F_E18.5_normal_CD31_1_DC23_B17


title: F_P1_normal_CD31_1_DC23_E17


title: F_P1_normal_CD31_1_DC23_G3


title: F_P21_normal_CD31_1_DC23_H8


title: F_E18.5_normal_CD31_1_DC23_A14


title: F_P21_normal_CD31_1_DC23_D18


title: F_E18.5_normal_CD31_1_DC23_N5


title: F_P1_normal_CD31_1_DC23_O17


title: F_P1_normal_CD31_1_DC23_A4


title: F_P21_normal_CD31_1_DC23_I22


title: F_E18.5_normal_CD31_1_DC23_I2


title: F_E18.5_normal_CD31_1_DC23_N11


title: F_P21_normal_CD31_1_DC23_K3


title: F_E18.5_normal_CD31_1_DC23_P5


title: F_P1_normal_CD31_1_DC23_G15


title: F_P21_normal_CD31_1_DC23_N13


title: F_P21_normal_CD31_1_DC23_I19


title: F_P21_normal_CD31_1_DC23_C9


title: F_E18.5_normal_CD31_1_DC23_N18


title: F_P1_normal_CD31_1_DC23_N15


title: F_P1_normal_CD31_1_DC23_O14


title: F_P21_normal_CD31_1_DC23_G8


title: F_P21_normal_CD31_1_DC23_F19


title: F_P1_normal_CD31_1_DC23_E9


title: F_P1_normal_CD31_1_DC23_C16


title: F_P21_normal_CD31_1_DC23_I9


title: M_E18.5_normal_CD31_1_DC30_G9


title: F_P21_normal_CD31_1_DC23_H5


title: F_P1_normal_CD31_1_DC23_H4


title: F_E18.5_normal_CD31_1_DC23_E4


title: F_P1_normal_CD31_1_DC23_H3


title: F_P21_normal_CD31_1_DC23_O5


title: F_E18.5_normal_CD31_1_DC23_A12


title: F_P21_normal_CD31_1_DC23_P7


title: F_P1_normal_CD31_1_DC23_G4


title: F_E18.5_normal_CD31_1_DC23_G1


title: F_P1_normal_CD31_1_DC23_G13


title: F_E18.5_normal_CD31_1_DC23_D17


title: F_P1_normal_CD31_1_DC23_E13


title: F_P1_normal_CD31_1_DC23_A12


title: F_P21_normal_CD31_1_DC23_H7


title: F_P1_normal_CD31_1_DC23_J23


title: F_P21_normal_CD31_1_DC23_P14


title: F_E18.5_normal_CD31_1_DC23_D7


title: F_P1_normal_CD31_1_DC23_P3


title: F_E18.5_normal_CD31_1_DC23_M4


title: F_E18.5_normal_CD31_1_DC23_K10


title: F_P1_normal_CD31_1_DC23_I2


title: F_P1_normal_CD31_1_DC23_J18


title: F_P21_normal_CD31_1_DC23_B5


title: F_P1_normal_CD31_1_DC23_D14


title: F_P21_normal_CD31_1_DC23_D23


title: F_P21_normal_CD31_1_DC23_N9


title: F_E18.5_normal_CD31_1_DC23_J14


title: F_P21_normal_CD31_1_DC23_B2


title: F_P21_normal_CD31_1_DC23_D14


title: F_E18.5_normal_CD31_1_DC23_E14


title: F_P21_normal_CD31_1_DC23_J4


title: F_P21_normal_CD31_1_DC23_D10


title: F_P1_normal_CD31_1_DC23_C4


title: F_E18.5_normal_CD31_1_DC23_O17


title: F_P1_normal_CD31_1_DC23_A14


title: F_P1_normal_CD31_1_DC23_O1


title: F_P21_normal_CD31_1_DC23_D8


title: F_P1_normal_CD31_1_DC23_M7


title: F_E18.5_normal_CD31_1_DC23_H10


title: F_P21_normal_CD31_1_DC23_F3


title: F_P21_normal_CD31_1_DC23_H10


title: F_P1_normal_CD31_1_DC23_P9


title: F_P1_normal_CD31_1_DC23_J5


title: F_P21_normal_CD31_1_DC23_P4


title: F_E18.5_normal_CD31_1_DC23_F4


title: F_P21_normal_CD31_1_DC23_F15


title: F_E18.5_normal_CD31_1_DC23_G23


title: F_E18.5_normal_CD31_1_DC23_E15


title: F_P21_normal_CD31_1_DC23_A3


title: F_E18.5_normal_CD31_1_DC23_E11


title: F_E18.5_normal_CD31_1_DC23_P18


title: F_E18.5_normal_CD31_1_DC23_E20


title: F_P21_normal_CD31_1_DC23_O10


title: F_P1_normal_CD31_1_DC23_N13


title: F_P1_normal_CD31_1_DC23_K17


title: F_P21_normal_CD31_1_DC23_K23


title: F_P21_normal_CD31_1_DC23_L4


title: F_P1_normal_CD31_1_DC23_D18


title: F_P1_normal_CD31_1_DC23_D5


title: F_P21_normal_CD31_1_DC23_K9


title: F_P1_normal_CD31_1_DC23_N4


title: F_E18.5_normal_CD31_1_DC23_L14


title: F_P21_normal_CD31_1_DC23_D15


title: F_P21_normal_CD31_1_DC23_J22


title: F_E18.5_normal_CD31_1_DC23_K23


title: F_E18.5_normal_CD31_1_DC23_P17


title: F_P1_normal_CD31_1_DC23_A1


title: F_P1_normal_CD31_1_DC23_E7


title: F_E18.5_normal_CD31_1_DC23_M16


title: F_P21_normal_CD31_1_DC23_G15


title: F_E18.5_normal_CD31_1_DC23_A23


title: F_P1_normal_CD31_1_DC23_J15


title: F_P1_normal_CD31_1_DC23_G8


title: F_P1_normal_CD31_1_DC23_M5


title: F_P21_normal_CD31_1_DC23_L1


title: F_P1_normal_CD31_1_DC23_J10


title: F_P21_normal_CD31_1_DC23_M20


title: F_P1_normal_CD31_1_DC23_J3


title: F_P1_normal_CD31_1_DC23_O6


title: F_E18.5_normal_CD31_1_DC23_N7


title: F_E18.5_normal_CD31_1_DC23_G17


title: F_P1_normal_CD31_1_DC23_L11


title: F_P1_normal_CD31_1_DC23_G20


title: F_P1_normal_CD31_1_DC23_L3


title: F_P21_normal_CD31_1_DC23_C17


title: F_E18.5_normal_CD31_1_DC23_D19


title: F_E18.5_normal_CD31_1_DC23_I17


title: F_P1_normal_CD31_1_DC23_B3


title: F_P1_normal_CD31_1_DC23_A6


title: F_P21_normal_CD31_1_DC23_G11


title: F_P1_normal_CD31_1_DC23_C15


title: F_E18.5_normal_CD31_1_DC23_P16


title: F_E18.5_normal_CD31_1_DC23_P7


title: F_P1_normal_CD31_1_DC23_N7


title: F_E18.5_normal_CD31_1_DC23_O23


title: F_P1_normal_CD31_1_DC23_J16


title: F_P21_normal_CD31_1_DC23_I16


title: F_P21_normal_CD31_1_DC23_C8


title: F_E18.5_normal_CD31_1_DC23_D12


title: F_P1_normal_CD31_1_DC23_L18


title: F_P21_normal_CD31_1_DC23_J15


title: F_E18.5_normal_CD31_1_DC23_N15


title: F_E18.5_normal_CD31_1_DC23_O20


title: F_P1_normal_CD31_1_DC23_H1


title: F_P1_normal_CD31_1_DC23_I12


title: F_E18.5_normal_CD31_1_DC23_F12


title: F_P1_normal_CD31_1_DC23_P2


title: F_P1_normal_CD31_1_DC23_O15


title: F_P21_normal_CD31_1_DC23_K18


title: F_P1_normal_CD31_1_DC23_J1


title: F_P1_normal_CD31_1_DC23_C14


title: F_P1_normal_CD31_1_DC23_B8


title: F_P21_normal_CD31_1_DC23_N8


title: F_P21_normal_CD31_1_DC23_O1


title: F_P21_normal_CD31_1_DC23_B4


title: F_P21_normal_CD31_1_DC23_C15


title: F_P21_normal_CD31_1_DC23_L20


title: F_P1_normal_CD31_1_DC23_M22


title: F_P1_normal_CD31_1_DC23_J13


title: F_E18.5_normal_CD31_1_DC23_D21


title: F_E18.5_normal_CD31_1_DC23_J17


title: F_P21_normal_CD31_1_DC23_L12


title: F_P21_normal_CD31_1_DC23_A15


title: F_E18.5_normal_CD31_1_DC23_E19


title: F_P21_normal_CD31_1_DC23_P2


title: F_P21_normal_CD31_1_DC23_G10


title: F_P21_normal_CD31_1_DC23_D19


title: F_E18.5_normal_CD31_1_DC23_D3


title: F_P21_normal_CD31_1_DC23_D13


title: F_P1_normal_CD31_1_DC23_N5


title: F_E18.5_normal_CD31_1_DC23_B20


title: F_E18.5_normal_CD31_1_DC23_F14


title: F_P1_normal_CD31_1_DC23_N12


title: F_P21_normal_CD31_1_DC23_E15


title: F_P21_normal_CD31_1_DC23_I1


title: F_P21_normal_CD31_1_DC23_A6


title: F_P1_normal_CD31_1_DC23_B19


title: F_P1_normal_CD31_1_DC23_F10


title: F_P21_normal_CD31_1_DC23_H17


title: F_E18.5_normal_CD31_1_DC23_E18


title: F_P1_normal_CD31_1_DC23_M18


title: F_E18.5_normal_CD31_1_DC23_H23


title: F_E18.5_normal_CD31_1_DC23_L19


title: F_P1_normal_CD31_1_DC23_F23


title: F_P21_normal_CD31_1_DC23_J12


title: F_P1_normal_CD31_1_DC23_M3


title: F_P1_normal_CD31_1_DC23_H12


title: F_P1_normal_CD31_1_DC23_D15


title: F_P1_normal_CD31_1_DC23_C11


title: F_P21_normal_CD31_1_DC23_M23


title: F_P21_normal_CD31_1_DC23_C10


title: F_P1_normal_CD31_1_DC23_F8


title: F_P21_normal_CD31_1_DC23_B15


title: F_P1_normal_CD31_1_DC23_B23


title: F_E18.5_normal_CD31_1_DC23_E17


title: F_P1_normal_CD31_1_DC23_L16


title: F_P1_normal_CD31_1_DC23_B22


title: F_E18.5_normal_CD31_1_DC23_J20


title: F_E18.5_normal_CD31_1_DC23_J3


title: F_P1_normal_CD31_1_DC23_G22


title: F_P21_normal_CD31_1_DC23_D21


title: F_E18.5_normal_CD31_1_DC23_O21


title: F_P1_normal_CD31_1_DC23_F22


title: F_P21_normal_CD31_1_DC23_E17


title: F_P1_normal_CD31_1_DC23_E19


title: F_P1_normal_CD31_1_DC23_G9


title: F_P21_normal_CD31_1_DC23_L8


title: F_P21_normal_CD31_1_DC23_F10


title: F_E18.5_normal_CD31_1_DC23_L10


title: F_P21_normal_CD31_1_DC23_B17


title: F_P1_normal_CD31_1_DC23_D1


title: F_E18.5_normal_CD31_1_DC23_B18


title: F_E18.5_normal_CD31_1_DC23_L18


title: F_P21_normal_CD31_1_DC23_G6


title: F_P21_normal_CD31_1_DC23_L2


title: F_P1_normal_CD31_1_DC23_C12


title: F_P1_normal_CD31_1_DC23_I11


title: F_E18.5_normal_CD31_1_DC23_F23


title: F_P1_normal_CD31_1_DC23_I18


title: F_E18.5_normal_CD31_1_DC23_L12


title: F_P21_normal_CD31_1_DC23_N5


title: F_E18.5_normal_CD31_1_DC23_E3


title: F_E18.5_normal_CD31_1_DC23_C16


title: F_P21_normal_CD31_1_DC23_F1


title: F_P1_normal_CD31_1_DC23_A9


title: F_P21_normal_CD31_1_DC23_M22


title: F_P21_normal_CD31_1_DC23_A4


title: F_E18.5_normal_CD31_1_DC23_F20


title: F_P1_normal_CD31_1_DC23_H22


title: F_P21_normal_CD31_1_DC23_G9


title: F_P21_normal_CD31_1_DC23_E8


title: F_E18.5_normal_CD31_1_DC23_B8


title: F_P1_normal_CD31_1_DC23_H9


title: F_E18.5_normal_CD31_1_DC23_K20


title: F_P1_normal_CD31_1_DC23_J6


title: F_P1_normal_CD31_1_DC23_B17


title: F_E18.5_normal_CD31_1_DC23_H14


title: F_E18.5_normal_CD31_1_DC23_G19


title: F_P21_normal_CD31_1_DC23_A1


title: F_P21_normal_CD31_1_DC23_A9


title: F_P1_normal_CD31_1_DC23_F1


title: F_E18.5_normal_CD31_1_DC23_G21


title: F_P21_normal_CD31_1_DC23_J18


title: F_P21_normal_CD31_1_DC23_I13


title: F_E18.5_normal_CD31_1_DC23_D13


title: F_E18.5_normal_CD31_1_DC23_K15


title: F_E18.5_normal_CD31_1_DC23_H8


title: F_P1_normal_CD31_1_DC23_E8


title: F_P21_normal_CD31_1_DC23_D1


title: F_E18.5_normal_CD31_1_DC23_N1


title: F_P21_normal_CD31_1_DC23_E20


title: F_E18.5_normal_CD31_1_DC23_N20


title: F_E18.5_normal_CD31_1_DC23_L9


title: F_E18.5_normal_CD31_1_DC23_O7


title: F_E18.5_normal_CD31_1_DC23_F11


title: F_P1_normal_CD31_1_DC23_G23


title: F_P1_normal_CD31_1_DC23_A3


title: F_E18.5_normal_CD31_1_DC23_F2


title: F_P1_normal_CD31_1_DC23_M23


title: F_P1_normal_CD31_1_DC23_E14


title: F_P1_normal_CD31_1_DC23_C6


title: F_E18.5_normal_CD31_1_DC23_I18


title: F_E18.5_normal_CD31_1_DC23_D14


title: F_P1_normal_CD31_1_DC23_K20


title: F_P1_normal_CD31_1_DC23_A10


title: F_P21_normal_CD31_1_DC23_A11


title: F_E18.5_normal_CD31_1_DC23_C15


title: F_E18.5_normal_CD31_1_DC23_H4


title: F_P21_normal_CD31_1_DC23_J6


title: F_P1_normal_CD31_1_DC23_C7


title: F_P21_normal_CD31_1_DC23_P16


title: F_P21_normal_CD31_1_DC23_M19


title: F_P1_normal_CD31_1_DC23_C18


title: F_P1_normal_CD31_1_DC23_F15


title: F_E18.5_normal_CD31_1_DC23_L22


title: F_E18.5_normal_CD31_1_DC23_I6


title: F_E18.5_normal_CD31_1_DC23_D22


title: F_P21_normal_CD31_1_DC23_C1


title: F_P1_normal_CD31_1_DC23_D10


title: F_E18.5_normal_CD31_1_DC23_P15


title: F_E18.5_normal_CD31_1_DC23_M22


title: F_P21_normal_CD31_1_DC23_F9


title: F_P1_normal_CD31_1_DC23_O16


title: F_E18.5_normal_CD31_1_DC23_I11


title: F_P1_normal_CD31_1_DC23_D8


title: F_E18.5_normal_CD31_1_DC23_O16


title: F_E18.5_normal_CD31_1_DC23_H22


title: F_P1_normal_CD31_1_DC23_P8


title: F_P1_normal_CD31_1_DC23_B13


title: F_P21_normal_CD31_1_DC23_N22


title: F_P21_normal_CD31_1_DC23_J9


title: F_P21_normal_CD31_1_DC23_I8


title: F_E18.5_normal_CD31_1_DC23_H17


title: F_P1_normal_CD31_1_DC23_I21


title: F_P1_normal_CD31_1_DC23_J4


title: F_P21_normal_CD31_1_DC23_N11


title: F_P21_normal_CD31_1_DC23_O2


title: F_P1_normal_CD31_1_DC23_D19


title: F_P1_normal_CD31_1_DC23_H11


title: F_P1_normal_CD31_1_DC23_N19


title: F_P21_normal_CD31_1_DC23_N3


title: F_P1_normal_CD31_1_DC23_N16


title: F_E18.5_normal_CD31_1_DC23_C12


title: F_E18.5_normal_CD31_1_DC23_E16


title: F_P1_normal_CD31_1_DC23_K9


title: F_P1_normal_CD31_1_DC23_B15


title: F_E18.5_normal_CD31_1_DC23_H3


title: F_E18.5_normal_CD31_1_DC23_P22


title: F_P21_normal_CD31_1_DC23_N4


title: F_P1_normal_CD31_1_DC23_C21


title: F_E18.5_normal_CD31_1_DC23_A13


title: F_P1_normal_CD31_1_DC23_F6


title: F_E18.5_normal_CD31_1_DC23_O15


title: F_P21_normal_CD31_1_DC23_N23


title: F_E18.5_normal_CD31_1_DC23_M7


title: F_P1_normal_CD31_1_DC23_E1


title: F_P1_normal_CD31_1_DC23_I6


title: F_P21_normal_CD31_1_DC23_G18


title: F_P21_normal_CD31_1_DC23_J2


title: F_E18.5_normal_CD31_1_DC23_N19


title: F_P21_normal_CD31_1_DC23_E22


title: F_P1_normal_CD31_1_DC23_M21


title: F_E18.5_normal_CD31_1_DC23_A18


title: F_E18.5_normal_CD31_1_DC23_L5


title: F_P21_normal_CD31_1_DC23_F18


title: F_E18.5_normal_CD31_1_DC23_F9


title: F_P1_normal_CD31_1_DC23_G21


title: F_E18.5_normal_CD31_1_DC23_A3


title: F_P1_normal_CD31_1_DC23_H21


title: F_P1_normal_CD31_1_DC23_H10


title: F_P21_normal_CD31_1_DC23_N19


title: F_E18.5_normal_CD31_1_DC23_G7


title: F_P1_normal_CD31_1_DC23_F3


title: F_E18.5_normal_CD31_1_DC23_I12


title: F_P1_normal_CD31_1_DC23_P19


title: F_E18.5_normal_CD31_1_DC23_C6


title: F_P21_normal_CD31_1_DC23_O13


title: F_P21_normal_CD31_1_DC23_B13


title: F_P21_normal_CD31_1_DC23_B21


title: F_P1_normal_CD31_1_DC23_C23


title: F_P1_normal_CD31_1_DC23_E12


title: F_P21_normal_CD31_1_DC23_E11


title: F_P21_normal_CD31_1_DC23_J16


title: F_E18.5_normal_CD31_1_DC23_A1


title: F_E18.5_normal_CD31_1_DC23_G14


title: F_P21_normal_CD31_1_DC23_C4


title: F_P21_normal_CD31_1_DC23_P23


title: F_E18.5_normal_CD31_1_DC23_J12


title: F_P1_normal_CD31_1_DC23_A19


title: F_P1_normal_CD31_1_DC23_P20


title: F_P1_normal_CD31_1_DC23_E5


title: F_P21_normal_CD31_1_DC23_O19


title: F_E18.5_normal_CD31_1_DC23_M9


title: F_P1_normal_CD31_1_DC23_E22


title: F_E18.5_normal_CD31_1_DC23_L6


title: F_P21_normal_CD31_1_DC23_M1


title: F_P21_normal_CD31_1_DC23_P13


title: F_P1_normal_CD31_1_DC23_P5


title: F_P1_normal_CD31_1_DC23_F17


title: F_E18.5_normal_CD31_1_DC23_C14


title: F_P1_normal_CD31_1_DC23_M12


title: F_E18.5_normal_CD31_1_DC23_F21


title: F_P1_normal_CD31_1_DC23_M4


title: F_E18.5_normal_CD31_1_DC23_D18


title: F_P21_normal_CD31_1_DC23_G13


title: F_P1_normal_CD31_1_DC23_P7


title: F_P21_normal_CD31_1_DC23_E13


title: F_P21_normal_CD31_1_DC23_P19


title: F_P21_normal_CD31_1_DC23_O8


title: F_E18.5_normal_CD31_1_DC23_N14


title: F_P21_normal_CD31_1_DC23_P5


title: F_P1_normal_CD31_1_DC23_D6


title: F_E18.5_normal_CD31_1_DC23_D4


title: F_P21_normal_CD31_1_DC23_G19


title: F_P1_normal_CD31_1_DC23_P14


title: F_P1_normal_CD31_1_DC23_O9


title: F_E18.5_normal_CD31_1_DC23_K9


title: F_E18.5_normal_CD31_1_DC23_P14


title: F_P21_normal_CD31_1_DC23_I10


title: F_E18.5_normal_CD31_1_DC23_G16


title: F_P1_normal_CD31_1_DC23_J7


title: F_E18.5_normal_CD31_1_DC23_K12


title: F_P21_normal_CD31_1_DC23_L23


title: F_E18.5_normal_CD31_1_DC23_P23


title: F_P1_normal_CD31_1_DC23_H17


title: F_E18.5_normal_CD31_1_DC23_G4


title: F_E18.5_normal_CD31_1_DC23_K11


title: F_E18.5_normal_CD31_1_DC23_G3


title: F_E18.5_normal_CD31_1_DC23_I5


title: F_P1_normal_CD31_1_DC23_A7


title: F_E18.5_normal_CD31_1_DC23_B16


title: F_E18.5_normal_CD31_1_DC23_B1


title: F_P1_normal_CD31_1_DC23_D17


title: F_P21_normal_CD31_1_DC23_F8


title: F_E18.5_normal_CD31_1_DC23_K17


title: F_P1_normal_CD31_1_DC23_M13


title: F_P21_normal_CD31_1_DC23_C16


title: F_P21_normal_CD31_1_DC23_A21


title: F_P1_normal_CD31_1_DC23_F7


title: F_P1_normal_CD31_1_DC23_O8


title: F_P1_normal_CD31_1_DC23_P15


title: F_P1_normal_CD31_1_DC23_D16


title: F_P1_normal_CD31_1_DC23_J9


title: F_P1_normal_CD31_1_DC23_M14


title: F_P1_normal_CD31_1_DC23_P23


title: F_P21_normal_CD31_1_DC23_I3


title: F_E18.5_normal_CD31_1_DC23_D9


title: F_P21_normal_CD31_1_DC23_M14


title: F_P21_normal_CD31_1_DC23_B7


title: F_E18.5_normal_CD31_1_DC23_G2


title: F_P1_normal_CD31_1_DC23_I16


title: F_E18.5_normal_CD31_1_DC23_K4


title: F_P1_normal_CD31_1_DC23_P4


title: F_P1_normal_CD31_1_DC23_I20


title: F_P1_normal_CD31_1_DC23_D12


title: F_P1_normal_CD31_1_DC23_C10


title: F_P1_normal_CD31_1_DC23_C9


title: F_P1_normal_CD31_1_DC23_A21


title: F_E18.5_normal_CD31_1_DC23_A8


title: F_P21_normal_CD31_1_DC23_P12


title: F_E18.5_normal_CD31_1_DC23_H6


title: F_P1_normal_CD31_1_DC23_L7


title: F_P21_normal_CD31_1_DC23_G12


title: F_P1_normal_CD31_1_DC23_F16


title: F_P1_normal_CD31_1_DC23_K15


title: F_P1_normal_CD31_1_DC23_H20


title: F_P1_normal_CD31_1_DC23_O5


title: F_E18.5_normal_CD31_1_DC23_I3


title: F_P21_normal_CD31_1_DC23_K16


title: F_P21_normal_CD31_1_DC23_G4


title: F_P21_normal_CD31_1_DC23_E1


title: F_P21_normal_CD31_1_DC23_E7


title: F_P21_normal_CD31_1_DC23_F16


title: F_P1_normal_CD31_1_DC23_K22


title: F_P1_normal_CD31_1_DC23_L15


title: F_P1_normal_CD31_1_DC23_M1


title: F_P21_normal_CD31_1_DC23_M8


title: F_P1_normal_CD31_1_DC23_B11


title: F_P21_normal_CD31_1_DC23_I5


title: F_P1_normal_CD31_1_DC23_H13


title: F_E18.5_normal_CD31_1_DC23_C10


title: F_P1_normal_CD31_1_DC23_D3


title: F_P1_normal_CD31_1_DC23_G19


title: F_P21_normal_CD31_1_DC23_J19


title: F_P1_normal_CD31_1_DC23_H5


title: F_P21_normal_CD31_1_DC23_A7


title: F_P1_normal_CD31_1_DC23_E6


title: F_P1_normal_CD31_1_DC23_O22


title: F_E18.5_normal_CD31_1_DC23_D10


title: F_E18.5_normal_CD31_1_DC23_H19


title: F_P1_normal_CD31_1_DC23_P13


title: F_P1_normal_CD31_1_DC23_O10


title: F_E18.5_normal_CD31_1_DC23_H16


title: F_E18.5_normal_CD31_1_DC23_G11


title: F_E18.5_normal_CD31_1_DC23_C13


title: F_E18.5_normal_CD31_1_DC23_I22


title: F_P21_normal_CD31_1_DC23_J23


title: F_E18.5_normal_CD31_1_DC23_O18


title: F_P21_normal_CD31_1_DC23_H12


title: F_P1_normal_CD31_1_DC23_O2


title: F_P21_normal_CD31_1_DC23_A12


title: F_P21_normal_CD31_1_DC23_A18


title: F_P21_normal_CD31_1_DC23_E12


title: F_E18.5_normal_CD31_1_DC23_P6


title: F_P21_normal_CD31_1_DC23_L6


title: F_P1_normal_CD31_1_DC23_I4


title: F_P1_normal_CD31_1_DC23_I15


title: F_E18.5_normal_CD31_1_DC23_P20


title: F_P21_normal_CD31_1_DC23_M3


title: F_P1_normal_CD31_1_DC23_M10


title: F_P1_normal_CD31_1_DC23_F12


title: F_E18.5_normal_CD31_1_DC23_H11


title: F_P21_normal_CD31_1_DC23_L15


title: F_E18.5_normal_CD31_1_DC23_N8


title: F_P21_normal_CD31_1_DC23_G20


title: F_E18.5_normal_CD31_1_DC23_C19


title: F_P21_normal_CD31_1_DC23_J8


title: F_E18.5_normal_CD31_1_DC23_A15


title: F_P21_normal_CD31_1_DC23_D20


title: F_P21_normal_CD31_1_DC23_N15


title: F_E18.5_normal_CD31_1_DC23_N9


title: F_E18.5_normal_CD31_1_DC23_D5


title: F_P21_normal_CD31_1_DC23_C12


title: F_P1_normal_CD31_1_DC23_G18


title: F_P1_normal_CD31_1_DC23_G5


title: F_E18.5_normal_CD31_1_DC23_H9


title: F_E18.5_normal_CD31_1_DC23_C7


title: F_P1_normal_CD31_1_DC23_G10


title: F_P1_normal_CD31_1_DC23_F11


title: F_E18.5_normal_CD31_1_DC23_J4


title: F_P1_normal_CD31_1_DC23_F14


title: F_P21_normal_CD31_1_DC23_M18


title: F_P21_normal_CD31_1_DC23_B1


title: F_P21_normal_CD31_1_DC23_A19


title: F_P1_normal_CD31_1_DC23_N9


title: F_P21_normal_CD31_1_DC23_B9


title: F_E18.5_normal_CD31_1_DC23_B10


title: F_P1_normal_CD31_1_DC23_G7


title: F_P1_normal_CD31_1_DC23_L21


title: F_P1_normal_CD31_1_DC23_N20


title: F_E18.5_normal_CD31_1_DC23_H13


title: F_P21_normal_CD31_1_DC23_M5


title: F_E18.5_normal_CD31_1_DC23_I10


title: F_P1_normal_CD31_1_DC23_A23


title: F_P1_normal_CD31_1_DC23_F9


title: F_P1_normal_CD31_1_DC23_P11


title: F_P21_normal_CD31_1_DC23_D2


title: F_E18.5_normal_CD31_1_DC23_J23


title: F_P21_normal_CD31_1_DC23_F12


title: F_P1_normal_CD31_1_DC23_J22


title: F_P21_normal_CD31_1_DC23_L17


title: F_P21_normal_CD31_1_DC23_H3


title: F_E18.5_normal_CD31_1_DC23_N10


title: F_E18.5_normal_CD31_1_DC23_L1


title: F_P1_normal_CD31_1_DC23_B20


title: F_P1_normal_CD31_1_DC23_D7


title: F_E18.5_normal_CD31_1_DC23_E10


title: F_P1_normal_CD31_1_DC23_F18


title: F_P21_normal_CD31_1_DC23_N16


title: F_P1_normal_CD31_1_DC23_L17


title: F_E18.5_normal_CD31_1_DC23_O13


title: F_E18.5_normal_CD31_1_DC23_N23


title: F_P1_normal_CD31_1_DC23_F2


title: F_E18.5_normal_CD31_1_DC23_I19


title: F_P1_normal_CD31_1_DC23_P16


title: F_P21_normal_CD31_1_DC23_O7


title: F_P21_normal_CD31_1_DC23_M9


title: F_P21_normal_CD31_1_DC23_A8


title: F_E18.5_normal_CD31_1_DC23_F10


title: F_P21_normal_CD31_1_DC23_G1


title: F_P21_normal_CD31_1_DC23_C14


title: F_P21_normal_CD31_1_DC23_H14


title: F_P21_normal_CD31_1_DC23_J20


title: F_P1_normal_CD31_1_DC23_O21


title: F_P1_normal_CD31_1_DC23_H23


title: F_P1_normal_CD31_1_DC23_J19


title: F_P21_normal_CD31_1_DC23_P9


title: F_P1_normal_CD31_1_DC23_J2


title: F_E18.5_normal_CD31_1_DC23_B12


title: F_E18.5_normal_CD31_1_DC23_C22


title: F_P1_normal_CD31_1_DC23_N23


title: F_E18.5_normal_CD31_1_DC23_P13


title: F_P21_normal_CD31_1_DC23_J13


title: F_P21_normal_CD31_1_DC23_N17


title: F_P21_normal_CD31_1_DC23_F2


title: F_P1_normal_CD31_1_DC23_I1


title: F_P1_normal_CD31_1_DC23_B5


title: F_P1_normal_CD31_1_DC23_M16


title: F_E18.5_normal_CD31_1_DC23_D8


title: F_E18.5_normal_CD31_1_DC23_N12


title: F_P21_normal_CD31_1_DC23_P6


title: F_P21_normal_CD31_1_DC23_N21


title: F_P21_normal_CD31_1_DC23_D4


title: F_P1_normal_CD31_1_DC23_K12


title: F_P21_normal_CD31_1_DC23_O11


title: F_P1_normal_CD31_1_DC23_L14


title: F_P21_normal_CD31_1_DC23_B16


title: F_P1_normal_CD31_1_DC23_O19


title: F_E18.5_normal_CD31_1_DC23_C21


title: F_P21_normal_CD31_1_DC23_F4


title: F_P21_normal_CD31_1_DC23_B11


title: F_P21_normal_CD31_1_DC23_L13


title: F_P21_normal_CD31_1_DC23_K6


title: F_P1_normal_CD31_1_DC23_M15


title: F_P1_normal_CD31_1_DC23_D13


title: F_E18.5_normal_CD31_1_DC23_N2


title: F_P1_normal_CD31_1_DC23_K2


title: F_P1_normal_CD31_1_DC23_J8


title: F_P21_normal_CD31_1_DC23_E4


title: F_P1_normal_CD31_1_DC23_K23


title: F_E18.5_normal_CD31_1_DC23_O4


title: F_P1_normal_CD31_1_DC23_J12


title: F_E18.5_normal_CD31_1_DC23_B22


title: F_P21_normal_CD31_1_DC23_P20


title: F_P21_normal_CD31_1_DC23_G22


title: F_E18.5_normal_CD31_1_DC23_F17


title: F_P1_normal_CD31_1_DC23_B12


title: F_P1_normal_CD31_1_DC23_K8


title: F_E18.5_normal_CD31_1_DC23_A20


title: F_E18.5_normal_CD31_1_DC23_N22


title: F_E18.5_normal_CD31_1_DC23_K8


title: F_E18.5_normal_CD31_1_DC23_M15


title: F_P1_normal_CD31_1_DC23_H15


title: F_E18.5_normal_CD31_1_DC23_H7


title: F_P21_normal_CD31_1_DC23_I18


title: F_E18.5_normal_CD31_1_DC23_M13


title: F_E18.5_normal_CD31_1_DC23_E6


title: F_P1_normal_CD31_1_DC23_B21


title: F_P21_normal_CD31_1_DC23_L14


title: F_P1_normal_CD31_1_DC23_O18


title: F_P21_normal_CD31_1_DC23_D6


title: F_E18.5_normal_CD31_1_DC23_M6


title: F_E18.5_normal_CD31_1_DC23_G12


title: F_P21_normal_CD31_1_DC23_M11


title: F_P1_normal_CD31_1_DC23_H16


title: F_P21_normal_CD31_1_DC23_J21


title: F_E18.5_normal_CD31_1_DC23_H21


title: F_P1_normal_CD31_1_DC23_L19


title: F_E18.5_normal_CD31_1_DC23_F6


title: F_P21_normal_CD31_1_DC23_F22


title: F_E18.5_normal_CD31_1_DC23_J18


title: F_E18.5_normal_CD31_1_DC23_H15


title: F_P21_normal_CD31_1_DC23_D22


title: F_P21_normal_CD31_1_DC23_E10


title: F_P21_normal_CD31_1_DC23_M6


title: F_P21_normal_CD31_1_DC23_K21


title: F_P21_normal_CD31_1_DC23_C19


title: F_P1_normal_CD31_1_DC23_L1


title: F_P21_normal_CD31_1_DC23_C13


title: F_E18.5_normal_CD31_1_DC23_J19


title: F_P1_normal_CD31_1_DC23_L6


title: F_E18.5_normal_CD31_1_DC23_O12


title: F_P21_normal_CD31_1_DC23_A2


title: F_P1_normal_CD31_1_DC23_I8


title: F_P21_normal_CD31_1_DC23_I23


title: F_P1_normal_CD31_1_DC23_H19


title: F_E18.5_normal_CD31_1_DC23_N4


title: F_E18.5_normal_CD31_1_DC23_I7


title: F_P1_normal_CD31_1_DC23_D22


title: F_E18.5_normal_CD31_1_DC23_L16


title: F_P1_normal_CD31_1_DC23_P1


title: F_E18.5_normal_CD31_1_DC23_L8


title: F_P1_normal_CD31_1_DC23_O7


title: F_E18.5_normal_CD31_1_DC23_M23


title: F_P1_normal_CD31_1_DC23_B7


title: F_E18.5_normal_CD31_1_DC23_J10


title: F_E18.5_normal_CD31_1_DC23_F22


title: F_P1_normal_CD31_1_DC23_L2


title: F_P1_normal_CD31_1_DC23_K5


title: F_P21_normal_CD31_1_DC23_L5


title: F_P21_normal_CD31_1_DC23_K2


title: F_P21_normal_CD31_1_DC23_L10


title: F_E18.5_normal_CD31_1_DC23_I13


title: F_E18.5_normal_CD31_1_DC23_P3


title: F_E18.5_normal_CD31_1_DC23_K7


title: F_P21_normal_CD31_1_DC23_B20


title: F_P1_normal_CD31_1_DC23_J11


title: F_P21_normal_CD31_1_DC23_H23


title: F_E18.5_normal_CD31_1_DC23_M17


title: F_P1_normal_CD31_1_DC23_O4


title: F_P1_normal_CD31_1_DC23_I22


title: F_P1_normal_CD31_1_DC23_J17


title: F_E18.5_normal_CD31_1_DC23_K6


title: F_P21_normal_CD31_1_DC23_E18


title: F_P21_normal_CD31_1_DC23_F20


title: F_E18.5_normal_CD31_1_DC23_A4


title: F_E18.5_normal_CD31_1_DC23_B7


title: F_E18.5_normal_CD31_1_DC23_M21


title: F_E18.5_normal_CD31_1_DC23_L23


title: F_E18.5_normal_CD31_1_DC23_L13


title: F_P1_normal_CD31_1_DC23_E23


title: F_E18.5_normal_CD31_1_DC23_K19


title: F_E18.5_normal_CD31_1_DC23_P1


title: F_P1_normal_CD31_1_DC23_D23


title: F_P1_normal_CD31_1_DC23_N8


title: F_P21_normal_CD31_1_DC23_I15


title: F_E18.5_normal_CD31_1_DC23_B5


title: F_P21_normal_CD31_1_DC23_M15


title: F_P21_normal_CD31_1_DC23_I12


title: F_E18.5_normal_CD31_1_DC23_B14


title: F_E18.5_normal_CD31_1_DC23_O8


title: F_E18.5_normal_CD31_1_DC23_E9


title: F_P1_normal_CD31_1_DC23_D2


title: F_E18.5_normal_CD31_1_DC23_L3


title: F_P21_normal_CD31_1_DC23_E9


title: F_P21_normal_CD31_1_DC23_L11


title: F_P1_normal_CD31_1_DC23_E18


title: F_P21_normal_CD31_1_DC23_K7


title: F_P1_normal_CD31_1_DC23_N1


title: F_E18.5_normal_CD31_1_DC23_C3


title: F_P1_normal_CD31_1_DC23_O3


title: F_P21_normal_CD31_1_DC23_C2


title: F_P1_normal_CD31_1_DC23_I7


title: F_P21_normal_CD31_1_DC23_N6


title: F_P1_normal_CD31_1_DC23_I17


title: F_P21_normal_CD31_1_DC23_E14


title: F_P1_normal_CD31_1_DC23_B2


title: F_P1_normal_CD31_1_DC23_E20


title: F_P21_normal_CD31_1_DC23_I17


title: F_P21_normal_CD31_1_DC23_C11


title: F_E18.5_normal_CD31_1_DC23_O1


title: F_E18.5_normal_CD31_1_DC23_L20


title: F_E18.5_normal_CD31_1_DC23_E8


title: F_P21_normal_CD31_1_DC23_F11


title: F_P1_normal_CD31_1_DC23_E2


title: F_E18.5_normal_CD31_1_DC23_O11


title: F_E18.5_normal_CD31_1_DC23_J1


title: F_E18.5_normal_CD31_1_DC23_P2


title: F_E18.5_normal_CD31_1_DC23_L11


title: F_P1_normal_CD31_1_DC23_J20


title: F_E18.5_normal_CD31_1_DC23_M11


title: F_E18.5_normal_CD31_1_DC23_L21


title: F_P21_normal_CD31_1_DC23_I7


title: F_P1_normal_CD31_1_DC23_A17


title: F_E18.5_normal_CD31_1_DC23_B6


title: F_E18.5_normal_CD31_1_DC23_M1


title: F_P1_normal_CD31_1_DC23_C5


title: F_P1_normal_CD31_1_DC23_H8


title: TSPY637-3

city: Houston

first: Anthony

last: Flores

state: TX

address: 6431 Fannin St., MSB 3.130

country: USA

institute: UTHSC/McGovern Medical School

data_processing:
Base calls onboard Illumina HiSeq
Raw data files processed using CLC Genomics Workbench v20
Reads mapped to reference genome ABC25 (CP049696), SAMN14234425
RPKM/TPM calculated using CLC Genomics Workbench v20
Supplementary_files_format_and_content: emm4_geo-TPM_10-2020.xlsx reports normalized read counts (TPM)

organism: Streptococcus pyogenes

source_name: Clinical isolate

growth_protocol: GAS cells were grown in rich medium (Todd-Hewitt, 0.2% yeast extract) to an OD of 0.5 (mid-exponential phase)

extract_protocol:
Cells collected in RNA protect and total RNA extracted using Qiagen RNeasy protocol adapted for GAS as described in Methods
Libraries constructed using Illumina ScriptSeq Complete v3

treatment_protocol: No treatments

tag: replicate

tag: growth condition

value: in vitro

tag: strain

tag: clade

value: emergent


title: TSPY767-2


title: TSPY767-1


title: TSPY637-1


title: TSPY767-3


title: TSPY637-2


title: F_E18.5_normal_CD31_1_DC23_G18


title: F_P21_normal_CD31_1_DC23_O18


title: F_P1_normal_CD31_1_DC23_E4


title: F_E18.5_normal_CD31_1_DC23_M5


title: F_E18.5_normal_CD31_1_DC23_B4


title: ABC208-3


title: ABC208-2


title: F_P21_normal_CD31_1_DC23_G14


title: ABC208-1


title: F_E18.5_normal_CD31_1_DC23_B2


title: ABC199-3


title: F_E18.5_normal_CD31_1_DC23_G22


title: F_P1_normal_CD31_1_DC23_J21


title: ABC199-2


title: F_P21_normal_CD31_1_DC23_H2


title: ABC199-1


title: F_E18.5_normal_CD31_1_DC23_G13


title: ABC221-3

value: historical


title: ABC76-3


title: F_P21_normal_CD31_1_DC23_B18

value: distal lung


title: F_E18.5_normal_CD31_1_DC23_E12


title: F_P21_normal_CD31_1_DC23_H4


title: ABC25-3


title: F_E18.5_normal_CD31_1_DC23_N17


title: ABC221-2


title: F_P1_normal_CD31_1_DC23_N3


title: F_P21_normal_CD31_1_DC23_K22


title: ABC221-1


title: F_P21_normal_CD31_1_DC23_N14


title: ABC76-2


title: F_E18.5_normal_CD31_1_DC23_M2


title: F_E18.5_normal_CD31_1_DC23_B21


title: ABC76-1


title: F_P1_normal_CD31_1_DC23_M2


title: ABC25-2


title: ABC25-1


title: W_4

city: Moscow

first: Sergei

last: Funikov

state: Moscow

address: Vavilov str. 32

country: Russia

institute: Engelhardt Insitute of Molecular Biology

data_processing:
Illumina Casava1.7 software used for basecalling.
Preprocessing of data was performed using a PPLine script that includes Trimmomatic for the adapter, length and quality trimming, STAR for mapping reads to the rat genome (release Rnor_6.0), and HTSeq-count for calculation of read counts aligned on genes
Genome_build: Rnor_6.0
Supplementary_files_format_and_content: reads counts were made by feature counts

molecule: polyA RNA

organism: Rattus norvegicus

source_name: corpora quadrigemina_W

extract_protocol:
Total RNA was extracted using the Extract RNA reagent (Evrogen). The concentration of RNA was measured with a Qubit Fluorometer (Invitrogen). The quality of RNA was determined with an Agilent BioAnalyzer 2100 using an RNA 600 nano kit. The RNA Integrity Number (RIN) of all RNA samples was not less than 8.
PolyA enriched libraries for RNA-seq were prepared using NEBNext Ultra II Directional RNA Library Prep Kit for Illumina according to the manufacturer’s protocol.
Seventy-five bp single-end sequencing was conducted on an Illumina NextSeq 500 platform.

value: wistar

tag: genotype

value: wild type

value: corpora quadrigemina


title: F_P1_normal_CD31_1_DC23_A15

tag: tissue

value: endothelial

value: normal


title: ABC3-3


title: F_P7_normal_CD31_1_DC21_E4

tag: sequencing run

value: Early Car4- capillaries


title: SAMPLE 10: MGA_case1

type: genomic

city: Hannover

first: Helge

last: Stark

address: Carl-Neuberg-Straße 1

department: Institute of Pathology

country: Germany

institute: Medical School Hannover

description: Internal ID #34

hyb_protocol: EZ-96 DNA Methylation-Lightning Kit and according to Infinium HD AssayMethylation Protocol

scan_protocol: According to Infinium HD AssayMethylation Protocol

data_processing: R packages: MethylAid (version 1.12.0), ChAMP (version 2.9.10)

label: Cy3, Cy5

molecule: genomic DNA

organism: Homo sapiens

source_name: breast, microglandular adenosis

label_protocol: Qubit dsDNA HS assay kit (Life Technologies, Carlsbad, U.S.A.)

extract_protocol: Maxwell RSC DNA FFPE Kit (Promega, Madison, U.S.A.) on a Maxwell RSC instrument (Promega)

tag: internal id

tag: gender

value: female

value: breast, microglandular adenosis

tag: region type

value: microglandular


title: W_1


title: F_P21_normal_mesench_2_DC21_J12

tag: plate

tag: well

tag: timepoint

value: Late Car4- capillaries


title: ABC3-2


title: F_P21_normal_mesench_2_DC21_L5

tag: cell type

tag: cell subtype

tag: mousename


title: F_E18.5_normal_CD31_1_DC23_I16

value: Proliferative EC

tag: coverage

tag: number of genes

tag: treatment


title: SAMPLE 1: norm_1

description: Internal ID #1117

source_name: breast, normal mammary glands

value: breast, normal mammary glands

value: normal mammary glands


title: SAMPLE 8: HR+_Ca_2

description: Internal ID #1125

source_name: breast, hormone-receptor-positive breast cancer

value: lobular


title: SAMPLE 4: TN_Ca_1

description: Internal ID #1120

source_name: breast, triple-negative breast cancer

value: breast, triple-negative breast cancer

value: ductal


title: W_2

tag: strain


title: F_P7_normal_CD31_1_DC21_H17

value: distal lung

value: F


title: F_P7_normal_CD31_1_DC21_E15


title: SAMPLE 9: HR+_Ca_3

description: Internal ID #1127

value: breast, hormone-receptor-positive breast cancer


title: SAMPLE 12: MGA_case5

description: Internal ID #40


title: F_P7_normal_CD31_1_DC21_B2


title: O_4

source_name: corpora quadrigemina_O

value: wistar

value: less prone to audiogenic epilepsy

value: corpora quadrigemina


title: O_3


title: SAMPLE 11: MGA_case4

description: Internal ID #490


title: SAMPLE 6: TN_Ca_3

description: Internal ID #1122


title: F_P7_normal_CD31_1_DC21_A16

value: endothelial

value: Arterial EC I

value: normal


title: F_P7_normal_CD31_1_DC21_E9

value: Early Car4- capillaries


title: KM_3

source_name: corpora quadrigemina_KM

value: prone to audiogenic epilepsy


title: F_E18.5_normal_CD31_1_DC23_K22

value: Proliferative EC


title: F_P21_normal_mesench_2_DC21_C9

value: Late Car4- capillaries


title: KM_2


title: F_P7_normal_CD31_1_DC21_C17


title: SAMPLE 5: TN_Ca_2

description: Internal ID #1121

value: female


title: KM_1


title: SAMPLE 3: norm_3

description: Internal ID #1132

value: breast, normal mammary glands

value: normal mammary glands


title: GH4C1 cells, KO at ZT34, rep3

city: Marseille

first: Anne-Marie

last: François-Bellan

address: 27 Bd Jean Moulin

department: Facute de Medecine

country: France

institute: CNRS-AMU

description: ko_featurecounts.csv: ZT34-K3

data_processing:
ECHO (Extended Circadian Harmonic Oscillators) for identification of rhythmic genes
LimoRhyde (linear models for rhythmicity, design) for characterization of the changes between groups
Genome_build: Rnor6.0
Supplementary_files_format_and_content: tab-delimited text files include featurecounts values for each Sample and each gene

source_name: GH4C1 cell line

growth_protocol: GH4C1 sommatolactotroph pituitary cells (ATCC_ CCL-82.2™, Molsheim, France) were grown in HamF10 medium supplemented with 15% horse serum and 2% fetal calf serum

extract_protocol:
At each time point total RNA was isolated using NucleoSpin®RNA XS (Macherey-Nagel).
RNA libraries were prepared for sequencing on the Illumina Hiseq 2500 following the manufacturer's protocols.
RNA-Seq 2 x 150 bp Strand-specific

tag: cell line

value: Neat1 -/-

tag: time


title: GH4C1 cells, KO at ZT34, rep1

description: ko_featurecounts.csv: ZT34-K1

tag: genotype


title: O_2

tag: tissue


title: F_P7_normal_CD31_1_DC21_E10

value: distal lung

tag: sequencing run


title: F_P7_normal_CD31_1_DC21_K17

tag: gender

value: F


title: GH4C1 cells, KO at ZT30, rep2

description: ko_featurecounts.csv: ZT30-K2


title: F_P7_normal_CD31_1_DC21_N17


title: F_P7_normal_CD31_1_DC21_O7


title: SAMPLE 7: HR+_Ca_1

description: Internal ID #1124

tag: internal id

value: breast, hormone-receptor-positive breast cancer

tag: region type

value: ductal


title: GH4C1 cells, KO at ZT26, rep1

description: ko_featurecounts.csv: ZT26-K1


title: F_P7_normal_CD31_1_DC21_F8

tag: plate

tag: well


title: SAMPLE 2: norm_2

description: Internal ID #1131


title: GH4C1 cells, KO at ZT34, rep2

description: ko_featurecounts.csv: ZT34-K2


title: F_P7_normal_CD31_1_DC21_H5

tag: timepoint

tag: cell type


title: F_P7_normal_CD31_1_DC21_P6

tag: cell subtype

tag: mousename


title: GH4C1 cells, KO at ZT30, rep3

description: ko_featurecounts.csv: ZT30-K3


title: F_P7_normal_CD31_1_DC21_K7

tag: coverage

tag: number of genes


title: F_P7_normal_CD31_1_DC21_H6

tag: treatment


title: F_P7_normal_CD31_1_DC21_C11


title: O_1

tag: strain

value: wistar

value: less prone to audiogenic epilepsy


title: F_P7_normal_CD31_1_DC21_G15

value: endothelial


title: GH4C1 cells, KO at ZT26, rep3

description: ko_featurecounts.csv: ZT26-K3

tag: cell line

tag: time


title: F_P7_normal_CD31_1_DC21_L15

tag: tissue


title: GH4C1 cells, KO at ZT14, rep1

description: ko_featurecounts.csv: ZT14-K1

tag: genotype


title: F_P21_normal_mesench_1_DC21_I19

tag: sequencing run

tag: gender

value: Venous EC


title: F_P7_normal_CD31_1_DC21_G23

value: normal


title: GH4C1 cells, KO at ZT26, rep2

description: ko_featurecounts.csv: ZT26-K2


title: F_P7_normal_CD31_1_DC21_G4

value: Early Car4- capillaries


title: GH4C1 cells, KO at ZT22, rep2

description: ko_featurecounts.csv: ZT22-K2


title: GH4C1 cells, KO at ZT18, rep1

description: ko_featurecounts.csv: ZT18-K1


title: GH4C1 cells, KO at ZT22, rep1

description: ko_featurecounts.csv: ZT22-K1


title: GH4C1 cells, KO at ZT10, rep3

description: ko_featurecounts.csv: ZT10-K3


title: GH4C1 cells, KO at ZT18, rep3

description: ko_featurecounts.csv: ZT18-K3


title: F_P21_normal_mesench_1_DC21_B14


title: F_P7_normal_CD31_1_DC21_O4


title: GH4C1 cells, KO at ZT18, rep2

description: ko_featurecounts.csv: ZT18-K2


title: GH4C1 cells, KO at ZT30, rep1

description: ko_featurecounts.csv: ZT30-K1


title: F_P7_normal_CD31_1_DC21_K23


title: GH4C1 cells, KO at ZT22, rep3

description: ko_featurecounts.csv: ZT22-K3


title: GH4C1 cells, KO at ZT14, rep3

description: ko_featurecounts.csv: ZT14-K3


title: F_P7_normal_CD31_1_DC21_J19


title: GH4C1 cells, KO at ZT14, rep2

description: ko_featurecounts.csv: ZT14-K2


title: GH4C1 cells, WT at ZT34, rep3

description: wt_featurecounts.csv: ZT34-C

value: wild type

value: no treatment


title: F_P7_normal_CD31_1_DC21_M8

value: Arterial EC I


title: F_P21_normal_mesench_1_DC21_N11

value: Late Car4- capillaries


title: F_P7_normal_CD31_1_DC21_P10


title: F_P7_normal_CD31_1_DC21_J7


title: GH4C1 cells, WT at ZT30, rep3

description: wt_featurecounts.csv: ZT30-C


title: F_P7_normal_CD31_1_DC21_K4

value: Proliferative EC


title: GH4C1 cells, KO at ZT10, rep1

description: ko_featurecounts.csv: ZT10-K1


title: GH4C1 cells, WT at ZT34, rep2

description: wt_featurecounts.csv: ZT34-B


title: F_P7_normal_CD31_1_DC21_N1


title: GH4C1 cells, WT at ZT34, rep1

description: wt_featurecounts.csv: ZT34-A


title: GH4C1 cells, WT at ZT30, rep1

description: wt_featurecounts.csv: ZT30-A


title: W_3

value: corpora quadrigemina


title: GH4C1 cells, WT at ZT30, rep2

description: wt_featurecounts.csv: ZT30-B


title: F_P7_normal_CD31_1_DC21_M4


title: F_P7_normal_CD31_1_DC21_A22


title: GH4C1 cells, WT at ZT26, rep3

description: wt_featurecounts.csv: ZT26-C


title: F_P7_normal_CD31_1_DC21_D22

value: Car4+ capillaries


title: GH4C1 cells, WT at ZT26, rep2

description: wt_featurecounts.csv: ZT26-B


title: GH4C1 cells, KO at ZT10, rep2

description: ko_featurecounts.csv: ZT10-K2

value: Neat1 -/-


title: GH4C1 cells, WT at ZT26, rep1

description: wt_featurecounts.csv: ZT26-A


title: F_P7_normal_CD31_1_DC21_L7

value: distal lung

value: F


title: ABC3-1

tag: replicate

tag: growth condition

value: in vitro

tag: clade

value: historical


title: F_P7_normal_CD31_1_DC21_B14

tag: plate

tag: well

tag: timepoint


title: F_P7_normal_CD31_1_DC21_B16

tag: cell type

tag: cell subtype

tag: mousename


title: F_P7_normal_CD31_1_DC21_H12

tag: coverage

tag: number of genes

tag: treatment


title: GH4C1 cells, WT at ZT22, rep3

description: wt_featurecounts.csv: ZT22-C

tag: cell line

tag: time


title: F_P7_normal_CD31_1_DC21_F14

tag: tissue


title: GH4C1 cells, WT at ZT22, rep1

description: wt_featurecounts.csv: ZT22-A

tag: genotype


title: GH4C1 cells, WT at ZT22, rep2

description: wt_featurecounts.csv: ZT22-B


title: F_P7_normal_CD31_1_DC21_K18

tag: sequencing run

tag: gender


title: GH4C1 cells, WT at ZT18, rep3

description: wt_featurecounts.csv: ZT18-C


title: GH4C1 cells, WT at ZT18, rep2

description: wt_featurecounts.csv: ZT18-B


title: F_P7_normal_CD31_1_DC21_B1


title: F_P7_normal_CD31_1_DC21_O3


title: F_P7_normal_CD31_1_DC21_E11


title: GH4C1 cells, WT at ZT18, rep1

description: wt_featurecounts.csv: ZT18-A


title: F_P7_normal_CD31_1_DC21_J14


title: GH4C1 cells, WT at ZT14, rep2

description: wt_featurecounts.csv: ZT14-B


title: GH4C1 cells, WT at ZT10, rep1

description: wt_featurecounts.csv: ZT10-A


title: F_P7_normal_CD31_1_DC21_I13


title: F_P7_normal_CD31_1_DC21_C9


title: GH4C1 cells, WT at ZT10, rep3

description: wt_featurecounts.csv: ZT10-C


title: F_P7_normal_CD31_1_DC21_H3


title: F_P7_normal_CD31_1_DC21_N18


title: F_P21_normal_mesench_2_DC21_I19


title: F_P21_normal_mesench_2_DC21_E3


title: GH4C1 cells, WT at ZT14, rep1

description: wt_featurecounts.csv: ZT14-A


title: F_P7_normal_CD31_1_DC21_O10


title: F_P7_normal_CD31_1_DC21_B10


title: F_P7_normal_CD31_1_DC21_I11


title: GH4C1 cells, WT at ZT10, rep2

description: wt_featurecounts.csv: ZT10-B


title: Root cells from Arabidopsis seedlings

city: Seattle

first: Michael

last: Dorrity

state: Washington

address: 3720 15th Ave NE, Foege Building, Room S313

institute: University of Washington

description: Arabidopsis thaliana ecotype Col-0 INTACT line UBQ10:NTF::ACT2:BirA (available from ABRC, stock CS68649). Growth conditions: LD (16h light/8h dark), 22C, ∼100 μmol m2s, 50% RH. Sample: whole roots, harvested 12 days after germination, from seedlings grown vertically on MS + 1% sucrose, atop filter paper (to facilitate root harvesting).

library_source: genomic

data_processing:
BAM files were generated using cellranger (10X genomics) ATAC-seq pipline version 1.2.0 as described by the manufacturer.
Genome_build: TAIR10
Supplementary_files_format_and_content: .cds R object

organism: Arabidopsis thaliana

extract_protocol: 10X genomics single cell ATAC protocol following manufacturer recommendations.

tag: ecotype

value: 5283 nuclei isolated from whole roots


title: F_P7_normal_CD31_1_DC21_L16

value: endothelial


title: F_P7_normal_CD31_1_DC21_F17


title: newCE9.MS.3

city: Boston

first: Jin

last: Meng

state: MA

address: 1 Joslin Place

institute: Joslin Diabetes Center

data_processing:
Single read 50 bp RNA-sequencing with poly(A) enrichment was performed using a HiSeq 2000 (Illumina). We aligned the FASTQ output files to the C. elegans WBcel235 reference genome using STAR 2.4.0j software 70 with an average >80% coverage mapping the reads to the genome. The differential gene expression analysis was performed using Bioconductor (http://bioconductor.org)
Rsubread 1.16.1 featureCounts was used to quantify the mapped reads in the aligned SAM output files. Transcripts with <1 count per million reads were discarded. Counts were scaled to Reads Per Kilobase of transcript per Million mapped reads (RPKM) and deposited as a final output file
To analyse the differential expressed genes, we compared atf-4(tm4397), and ldIs119 to wild type using Degust (http://degust.erc.monash.edu) with the following settings: RPKM with minimum 5 counts using edgeR with a false discovery rate (FDR) of 0.1 and an absolute log fold change (FC) of 1 relative to wild type. Results are displayed in MA-plots.
Functional annotation clustering was performed with DAVID54 using high classification stringencies.
Genome_build: C. elegans WBcel235 reference genome
Supplementary_files_format_and_content: SupplementaryTable3-ATF4_RNAseq_rpkm is the Excel worksheet containing RNA-Seq data from atf-4 loss-of-function, ATF-4OE, and WT (N2) animals.

organism: Caenorhabditis elegans

source_name: whole body

growth_protocol: Three independent biological replicates were prepared by using sodium hypochlorite to harvest eggs and overnight L1 arrest in M9 buffer with 10 mg/ml cholesterol to synchronise C. elegans. For each sample, about 20000 C. elegans per strain were allowed to develop to the L4 stage under normal growth conditions on NGM OP50 plates at 20oC (about 1000 C. elegans per one 10 cm NGM OP50 plate). WT, atf-4(tm4397), and ldIs119 were grown at the same time for each biological replicate.

extract_protocol:
RNA was isolated with Trizol (TRI REAGENT Sigma), DNAse-treated, and cleaned over a column (RNA Clean & ConcentratorTM ZYMO Research).
The RNA was sent to Dana-Farber Cancer Institute Center for Computational Biology (CCCB, http://cccb.dfci.harvard.edu/rna-sequence). At the CCCB, the RNA Integrity Number (RIN) was assessed by using the Bioanalyzer 2100 (Agilent Technologies), and only samples with a high RIN score were used to prepare cDNA libraries. All nine samples were multiplexed in a single lane.

treatment_protocol: C. elegans were washed from the culturing NGM plates and washed additional 3 times with M9 buffer to wash away the OP50 bacteria.

tag: developmental stage

tag: strain

value: whole body


title: newCE5.LD.2


title: newCE7.N2.3

value: wild-type


title: newCE6.MS.2


title: newCE4.N2.2


title: F_P21_normal_mesench_1_DC21_O21

tag: plate

tag: well

value: normal


title: F_P7_normal_CD31_1_DC21_H21

tag: timepoint

tag: cell type

value: Early Car4- capillaries


title: newCE3.MS.1


title: F_P7_normal_CD31_1_DC21_I4

tag: cell subtype

tag: mousename


title: newCE2.LD.1


title: newCE8.LD.3


title: GH4C1 cells, WT at ZT14, rep3

description: wt_featurecounts.csv: ZT14-C

value: wild type

value: no treatment


title: newCE1.N2.1


title: F_P7_normal_CD31_1_DC21_F21

tag: coverage

tag: number of genes


title: F_P7_normal_CD31_1_DC21_I10

tag: treatment


title: F_P7_normal_CD31_1_DC21_P14


title: L4 worms treated with 500 μM ferulic acid treatment, at days 5.

city: Changchun

first: hui

last: li

address: qianjinstreet

country: China

institute: jilin university

data_processing:
Based on sequencing-by-synthesis (Sequencing By Synthesis, SBS) technology, cDNA libraries were sequenced on Illumina high-throughput platform, generating significant amounts of high-quality data as known as raw data (Raw Data) which usually was FASTQ format. Raw Data for each sequencing sample included two FASTQ files contain all cDNA fragments were measured at both ends of Reads.
HISAT2 is an alignment software for RNA-seq,which is more accurate than Tophat2/Bowtie2. HISAT2 builds index for genome sequence with method burrows-Wheeler Transformation and Ferragina-Manzini(FM) index that make HISAT2 alignment speed higher and computer sourece smaller.
Use StringTie to assembly the transcripts with mapped reads, StringTie uses a novel network flow algorithm to quantitate full-length transcripts representing multiple splice variants for each gene locus.
Genome_build: mm9

source_name: whole worms

growth_protocol: L4 worms treated with ferulic acid and FuDR (avioding laying eggs ) in Nematode Growth Medium

extract_protocol:
The purity, concentration and integrity of RNA samples are tested using advanced molecular biology equipment to ensure the use of qualified samples for transcriptome sequencing.    A total amount of 1 μg RNA per sample was used as input material for the RNA sample preparations. Sequencing libraries were generated using NEBNext UltraTM RNA Library Prep Kit for Illumina (NEB, USA) following manufacturer’s recommendations and index codes were added to attribute sequences to each sample. Briefly, mRNA was purified from total RNA using poly-T oligo-attached magnetic beads. Fragmentation was carried out using divalent cations under elevated temperature in NEBNext First Strand Synthesis Reaction Buffer（5X）. First strand cDNA was synthesized using random hexamer primer and M-MuLV Reverse Transcriptase（RNase H-）. Second strand cDNA synthesis was subsequently performed using DNA Polymerase I and RNase H . Remaining overhangs were converted into blunt ends via exonuclease/polymerase activities. After adenylation of 3’ ends of DNA fragments, NEBNext Adaptor with hairpin loop structure were ligated to prepare for hybridization. In order to select cDNA fragments of preferentially 240 bp in length, the library fragments were purified with AMPure XP system (Beckman Coulter, Beverly, USA). Then 3 μl USER Enzyme (NEB, USA) was used with size-selected, adaptor-ligated cDNA at 37°C for 15 min followed by 5 min at 95°C before PCR. Then PCR was performed with Phusion High-Fidelity DNA polymerase, Universal PCR primers and Index (X) Primer. At last, PCR products were purified (AMPure XP system) and library quality was assessed on the Agilent Bioanalyzer 2100 system
The clustering of the index-coded samples was performed on a cBot Cluster Generation System using TruSeq PE Cluster Kit v4-cBot-HS (Illumia) according to the manufacturer’s instructions. After cluster generation, the library preparations were sequenced on an Illumina platform and paired-end reads were generated.

treatment_protocol: L4 worms treated with 0 or 500 μM ferulic acid for 5 daysin Nematode Growth Medium

value: 500 uM ferulic acid

tag: development stage


title: L4 worms treated with 0 μM ferulic acid treatment, at days 5.

value: 0 uM


title: F_P21_normal_mesench_1_DC21_D17

tag: tissue

value: Late Car4- capillaries


title: F_P21_normal_mesench_1_DC21_L14


title: F_P7_normal_CD31_1_DC21_J6

value: Proliferative EC


title: F_P7_normal_CD31_1_DC21_P19


title: F_P7_normal_CD31_1_DC21_G12

value: Venous EC


title: L0615_UNT_rep2_RNAseq

city: Gdansk

first: Jakub

last: Mieczkowski

address: Debinki 12

country: Poland

institute: Medical University of Gdansk

description:
POL_F04_0001_P01_V12_S6_1
l0615_unt_rnaseq_spheres_r2

data_processing:
The sequenced paired-end reads were mapped to hg38 genome using tophat2 aligner with the default parameters. The counts were computed with Htseq software.
Genome_build: hg38
Supplementary_files_format_and_content: bedGraph files were generated using coverage function from GenomicAlignments Bioconductor;   expression.matrix.txt file is a tab-delimited text file including TPM values for each Sample

growth_protocol: Sphere forming assay: GBM-derived stem cells (L0125, L0512, L0615, L0627) were seeded at a low density (3000 viable cells/cm2) onto non-adherent plates and cultured in DMEM/F-12 medium, supplemented with 2% B27 (Gibco Invitrogen, Basel, Switzerland), 20 ng/ml rh bFGF (Miltenyi Biotec, Bergisch Gladbach, Germany), 20 ng/ml rh EGF (StemCell Technologies, Vancouver, BC, Canada), 0.0002% heparin (StemCell Technologies, Vancouver, BC, Canada) and antibiotics (Gibco Invitrogen, Basel, Switzerland). Cells were fed every 3 days by adding 25% of the medium.

extract_protocol:
Total cellular RNA was extracted using the RNeasy Mini kit (Qiagen, Hilden, Germany) and purified using RNeasy columns according to the manufacturer’s instructions. The integrity of RNA was checked using the Agilent's 2100 Bioanalyzer. The same amount of RNA from two independent experiments were used (total amount - 500ng of RNA).
In total, 12 strand-specific polyA enriched RNA libraries were prepared using the KAPA Stranded mRNA Sample Preparation Kit according to the manufacturer’s protocol (Kapa Biosystems, Wilmington MA, USA). Libraries were run in the rapid run flow cell.

treatment_protocol:
Sphere differentiation: 6-day spheres were treated with 100 ng/ml BMP4 for 4 days (with fresh BMP4 was added every two days).
Treatment of spheres with TMZ: control (kept for 6-day) or BMP4-differentiated spheres (for 4 days) were treated with 500 mM TMZ for the next 3 days. As DMSO induced differentiation of embryonic stem cells, for the most experiments TMZ was dissolved in deionized water. A stock solution 30.9 mM (6 mg/ml) of TMZ was prepared.

tag: cell line

value: GBM-derived stem cells

value: Untreated

tag: egfr status

value: high


title: L0615_BMP4_rep1_RNAseq

description:
POL_F04_0001_P01_V31_S7_1
l0615_bmp4_rnaseq_spheres_r1


title: L0615_BMP4TMZ_RNAseq

description:
POL_F04_0001_P01_V41_S8_1
l0615_bmp4tmz_rnaseq_spheres

value: BMP4 and Temozolomide


title: L0615_UNT_rep1_RNAseq

description:
POL_F04_0001_P01_V11_S5_1
l0615_unt_rnaseq_spheres_r1


title: F_P7_normal_CD31_1_DC21_A14

value: distal lung

tag: sequencing run

tag: gender

value: F


title: L0125_BMP4TMZ_RNAseq

description:
POL_F03_0001_P01_V41_S4_1
l0125_bmp4tmz_rnaseq_spheres

value: low


title: L0125_BMP4_rep2_RNAseq

description:
POL_F03_0001_P01_V32_S3_1
l0125_bmp4_rnaseq_spheres_r2


title: L0125_BMP4_rep1_RNAseq

description:
POL_F03_0001_P01_V31_S3_1
l0125_bmp4_rnaseq_spheres_r1


title: F_P7_normal_CD31_1_DC21_N12

value: endothelial


title: F_P21_normal_mesench_2_DC21_C8

value: normal


title: L0125_UNT_rep2_RNAseq

description:
POL_F03_0001_P01_V12_S1_1
l0125_unt_rnaseq_spheres_r2


title: F_P7_normal_CD31_1_DC21_B8


title: F_P7_normal_CD31_1_DC21_G20

value: Early Car4- capillaries


title: L0615_BMP4_rep2_RNAseq

description:
POL_F04_0001_P01_V32_S7_1
l0615_bmp4_rnaseq_spheres_r2


title: F_P21_normal_mesench_1_DC21_B4

value: Car4+ capillaries


title: L0125_UNT_rep1_RNAseq

description:
POL_F03_0001_P01_V11_S1_1
l0125_unt_rnaseq_spheres_r1


title: F_P7_normal_CD31_1_DC21_P18


title: F_P7_normal_CD31_1_DC21_F3


title: F_P21_normal_mesench_1_DC21_I15


title: F_P7_normal_CD31_1_DC21_F11


title: F_P7_normal_CD31_1_DC21_F4


title: rTcpC [T3]

city: HangZhou

first: Qian

last: Ou

state: Zhejiang

address: Medical College of Zijingang Campus of Zhejiang University

department: Medical College

institute: Zhejiang University

data_processing:
Cutadapt software (https://cutadapt.readthedocs.io/en/stable/,version:cutadapt-1.9) was used to remove the reads that contained adaptor contamination,(command line: ~cutadapt -a ADAPT1 -A ADAPT2 -o out1.fastq -p out2.fastq in1.fastq in2.fastq -O 5 -m 100).
 And After removed the low quality bases and undetermined bases ,we used HISAT2 software (https://daehwankimlab.github.io/hisat2/,version:hisat2-2.0.4) to map reads to the genome (for example:Homo sapiens Ensembl v96),(command line: ~hisat2 -1 R1.fastq.gz -2 R1.fastq.gz -S sample_mapped.sam).
The mapped reads of each sample were assembled using StringTie (http://ccb.jhu.edu/software/stringtie/,version:stringtie-1.3.4d.Linux_x86_64) with default parameters (command line: ~stringtie -p 4 -G genome.gtf -o output.gtf -l sample input.bam). Then, all transcriptomes from all samples were merged to reconstruct a comprehensive transcriptome using gffcompare software(http://ccb.jhu.edu/software/stringtie/gffcompare.shtml,version:gffcompare-0.9.8.Linux_x86_64).
After the final transcriptome was generated, StringTie and ballgown(http://www.bioconductor.org/packages/release/bioc/html/ballgown.html) were used to estimate the expression levels of all transcripts and perform expression level for mRNAs by calculating FPKM (FPKM = [total_exon_fragments / mapped_reads(millions) × exon_length(kB)]),(command line: ~stringtie -e -B -p 4 -G merged.gtf -o samples.gtf samples.bam).
 The differentially expressed mRNAs were selected with fold change > 2 or fold change < 0.5 and p value < 0.05 by R package edgeR(https://bioconductor.org/packages/release/bioc/html/edgeR.html) or DESeq2(http://www.bioconductor.org/packages/release/bioc/html/DESeq2.html)
Genome_build: GRCh38
Supplementary_files_format_and_content: analysis GO enrichment and KEGG enrichment to the differentially expressed mRNAs.

source_name: rTcpC

growth_protocol: EDTA-anticoagulated peripheral blood from healthy donors was used to isolate neutrophils using EasySep Direct Human Neutrophil Isolation Kit (StemCell Technologies, USA) following the manufacturer’s instructions. Erythrocytes were lysed with red blood cell lysis buffer and washed with PBS. Subsequently, purity of the human neutrophils was evaluated by FACS using antibodies against Ly-6G/Ly-6C (1:500 dilution, Ly-6G/Ly-6C monoclonal antibody, PE, Thermo, USA) and CD11b (1:500 dilution, CD11b monoclonal antibody, FITC, Thermo, USA). Neutrophil purity was >93%

extract_protocol:
Total RNA was isolated and purified using TRIzol reagent (Invitrogen, Carlsbad, CA, USA) following the manufacturer's procedure. The RNA amount and purity of each sample was quantified using NanoDrop ND-1000 (NanoDrop, Wilmington, DE, USA). The RNA integrity was assessed by Bioanalyzer 2100 (Agilent, CA, USA) with RIN number >7.0, and confirmed by electrophoresis with denaturing agarose gel. Poly (A) RNA is purified from 1μg total RNA using Dynabeads Oligo (dT)25-61005 (Thermo Fisher, CA, USA) using two rounds of purification.
The RNA integrity was assessed by Bioanalyzer 2100 (Agilent, CA, USA) with RIN number >7.0, and confirmed by electrophoresis with denaturing agarose gel. Poly (A) RNA is purified from 1μg total RNA using Dynabeads Oligo (dT)25-61005 (Thermo Fisher, CA, USA) using two rounds of purification. Then the poly(A) RNA was fragmented into small pieces using Magnesium RNA Fragmentation Module (NEB, cat.e6150, USA) under 94℃ 5-7min. Then the cleaved RNA fragments were reverse-transcribed to create the cDNA by SuperScript™ II Reverse Transcriptase (Invitrogen, cat. 1896649, USA), which were next used to synthesise U-labeled second-stranded DNAs with E. coli DNA polymerase I (NEB, cat.m0209, USA), RNase H (NEB, cat.m0297, USA) and dUTP Solution (Thermo Fisher, cat.R0133, USA）. An A-base is then added to the blunt ends of each strand, preparing them for ligation to the indexed adapters. Each adapter contains a T-base overhang for ligating the adapter to the A-tailed fragmented DNA. Single- or dual-index adapters are ligated to the fragments, and size selection was performed with AMPureXP beads. After the heat-labile UDG enzyme (NEB, cat.m0280, USA) treatment of the U-labeled second-stranded DNAs, the ligated products are amplified with PCR by the following conditions: initial denaturation at 95℃ for 3 min; 8 cycles of denaturation at 98℃ for 15 sec, annealing at 60℃ for 15 sec, and extension at 72℃ for 30 sec; and then final extension at 72℃ for 5 min. The average insert size for the final cDNA library was 300±50 bp. At last, we performed the 2×150bp paired-end sequencing (PE150) on an Illumina Novaseq™ 6000 (LC-Bio Technology CO., Ltd., Hangzhou, China) following the vendor's recommended protocol.

treatment_protocol: Neutrophils (1×10^6 cells) were treated for120 min with 1 μg/ml LPS, 4 μg/ml rTcpC, 4 μg/ml rTcpC + 1 μg/ml LPS, respectively, and untreated neutrophils were served as the control group. Cells were collected (1500 rpm, 10 min) and frozen at -80 °C with RNAiso Plus (TaKaRa, Japan).

value: blood

value: neutrophils

value: rTcpC-treated


title: LPS_rTcpC [LT2]

value: LPS+rTcpC-treated


title: rTcpC [T1]


title: F_P7_normal_CD31_1_DC21_H1


title: F_P7_normal_CD31_1_DC21_J16

value: Proliferative EC


title: F_P7_normal_CD31_1_DC21_J23


title: LPS3

source_name: LPS

value: LPS-treated


title: LPS_rTcpC [LT1]


title: F_P7_normal_CD31_1_DC21_C23

value: Arterial EC I


title: LPS2


title: L0125_TMZ_RNAseq

description:
POL_F03_0001_P01_V21_S2_1
l0125_tmz_rnaseq_spheres

value: GBM-derived stem cells

value: Temozlomide


title: F_P7_normal_CD31_1_DC21_P12

value: Venous EC


title: F_P7_normal_CD31_1_DC21_P1

value: distal lung


title: Control2

source_name: Control

value: untreated


title: Control3


title: F_P7_normal_CD31_1_DC21_M18

value: F


title: Control1


title: rTcpC [T2]


title: F_P7_normal_CD31_1_DC21_J3

value: endothelial

value: Late Car4- capillaries


title: LPS_rTcpC [LT3]


title: F_P7_normal_CD31_1_DC21_L10

value: Early Car4- capillaries

value: normal


title: Gata3_Day4.6.mTE_3

city: Exeter

first: Daniel

last: Spindlow

state: Devon

address: Stocker Road

department: Living Systems Institute

country: United Kingdom

institute: University of Exeter

data_processing:
Trim-Galore
STAR
FeatureCounts
Genome_build: GRCh38
Supplementary_files_format_and_content: Counts_raw.txt: Raw counts text file.

source_name: Blastoid

growth_protocol: Frozen human blastocysts (E5 or E6) were thawed and cultured in N2B27 medium under mineral oil. The majority of embryos were cultured for 24 hours for development to late blastocysts (E6 or E7). Human naïve pluripotent stem cells (HNES1-GATA3:mKO2) [Ge Guo et al., 2021] or niPSC [Bredenkamp Nicholas et al.,2019] were cultured in PXGL on MEF. Dissociated human naïve pluripotent stem cells were cultured in a low attachment 96-well plate in N2B27 supplemented with 1.5uMPD03 and 1uMA83 and 10uM Y-27632 for 44h. The formed aggregates were transferred in N2B27 supplemented with 0.5uM A83. After 18h, they were transferred to N2B27 to form blastocyst-like structure.

extract_protocol:
Dissociated single cells were transferred immediately into Smart-Seq2 single-cell lysis buffer and immediately frozen.
The Smart-Seq2 library was prepared as described in Picelli S et al. 2014.

treatment_protocol: The zona pellucida was removed using acid Tyrode’s solution. Human embryos and human blastocyst model were moved to filtered M2 drop and cut mTE manually using glass pipettes. mTE and the other part containing ICM and pTE were transferred to a drop of Accutase or TrypLE respectively using glass capillary or Pasteur pipette and incubated for 7-10 min at 37 oC or room temperature. Then mTE and ICM with pTE were transferred to a drop of filtered M2 respectively and dissociated by repetitive pipetting using a finely drawn Pasteur pipette or glass capillary of which diameter is just larger than a cell.

value: Blastoid

tag: lineage

value: Trophectoderm

value: mural

tag: time point

value: 4 days after stem cells seeded to form cell aggregates


title: Gata3_Day4.6.mTE_2

value: Primitive Endoderm


title: Gata3_Day4.6.pTEICM_38

value: Epiblast

value: polar


title: F_P7_normal_CD31_1_DC21_E7

tag: plate


title: Gata3_Day4.6.pTEICM_37


title: LPS1

value: blood

value: neutrophils

value: LPS-treated


title: F_P7_normal_CD31_1_DC21_E3

value: distal lung

tag: well


title: Gata3_Day4.6.pTEICM_36


title: F_P7_normal_CD31_1_DC21_A2

tag: timepoint

value: Proliferative EC


title: F_P7_normal_CD31_1_DC21_N15

value: F

tag: cell type


title: Gata3_Day3.9.pTEICM_10

value: 3 days after stem cells seeded to form cell aggregates


title: F_P21_normal_mesench_2_DC21_H20

value: endothelial

tag: cell subtype

value: Late Car4- capillaries


title: F_P21_normal_mesench_2_DC21_B4

value: Car4+ capillaries

tag: mousename

value: normal


title: Gata3_Day3.9.pTEICM_11

value: Blastoid

value: Trophectoderm


title: F_P7_normal_CD31_1_DC21_I5

value: Early Car4- capillaries

tag: coverage


title: F_P7_normal_CD31_1_DC21_A10

value: Arterial EC I

tag: number of genes


title: F_P7_normal_CD31_1_DC21_D6

tag: treatment


title: Gata3_Day3.9.pTEICM_7


title: Gata3_Day3.9.pTEICM_9


title: F_P21_normal_mesench_2_DC21_K13


title: F_P7_normal_CD31_1_DC21_L14


title: Gata3_Day4.6.mTE_1

value: mural

value: 4 days after stem cells seeded to form cell aggregates


title: F_P7_normal_CD31_1_DC21_M16


title: Gata3_Day3.9.pTEICM_6

value: polar


title: F_P21_normal_mesench_2_DC21_D20


title: Gata3_Day3.9.pTEICM_4

value: Transitioning


title: Gata3_Day3.9.pTEICM_5


title: Gata3_Day4.6.pTEICM_34


title: F_P21_normal_mesench_2_DC21_F11


title: Gata3_Day4.6.pTEICM_35

value: Epiblast


title: F_P7_normal_CD31_1_DC21_L1

value: distal lung

value: Venous EC


title: F_P7_normal_CD31_1_DC21_L22

value: F


title: Gata3_Day4.6.pTEICM_32


title: Gata3_Day4.6.pTEICM_33


title: F_P7_normal_CD31_1_DC21_I15


title: F_P7_normal_CD31_1_DC21_I23


title: Gata3_Day4.6.pTEICM_29


title: F_P21_normal_mesench_2_DC21_N23


title: Gata3_Day3.9.pTEICM_8

value: 3 days after stem cells seeded to form cell aggregates


title: F_P7_normal_CD31_1_DC21_E14

value: endothelial


title: Gata3_Day4.6.pTEICM_28


title: Gata3_Day4.6.pTEICM_27


title: Gata3_Day3.9.pTEICM_3


title: F_P7_normal_CD31_1_DC21_H16


title: F_P7_normal_CD31_1_DC21_A13


title: F_P7_normal_CD31_1_DC21_M10


title: F_P7_normal_CD31_1_DC21_F18


title: Gata3_Day3.8.mTE_5


title: Gata3_Day4.6.pTEICM_25


title: F_P21_normal_mesench_1_DC21_N7

value: Late Car4- capillaries


title: F_P7_normal_CD31_1_DC21_B21


title: F_P7_normal_CD31_1_DC21_G1

value: Car4+ capillaries


title: F_P7_normal_CD31_1_DC21_G14

value: normal


title: Gata3_Day4.6.pTEICM_30

value: Blastoid

value: Primitive Endoderm


title: F_P7_normal_CD31_1_DC21_C8

value: Proliferative EC


title: Gata3_Day4.6.pTEICM_24


title: F_P21_normal_mesench_1_DC21_E7


title: Gata3_Day4.6.pTEICM_21

value: Trophectoderm


title: Gata3_Day4.6.pTEICM_20


title: F_P7_normal_CD31_1_DC21_E5


title: F_P7_normal_CD31_1_DC21_G16

value: Early Car4- capillaries


title: Gata3_Day3.9.pTEICM_1


title: F_P7_normal_CD31_1_DC21_P22


title: Gata3_Day3.8.pTEICM_11


title: Gata3_Day3.8.pTEICM_7


title: Gata3_Day3.9.pTEICM_2


title: Gata3_Day4.6.pTEICM_18

value: 4 days after stem cells seeded to form cell aggregates


title: Gata3_Day3.8.pTEICM_6

value: polar


title: F_P7_normal_CD31_1_DC21_F2


title: Gata3_Day3.8.pTEICM_5


title: F_P7_normal_CD31_1_DC21_J21


title: F_P7_normal_CD31_1_DC21_J20


title: F_P21_normal_mesench_1_DC21_O17


title: Gata3_Day3.8.mTE_2

value: Transitioning

value: mural


title: Gata3_Day4.6.pTEICM_15


title: Gata3_Day4.6.pTEICM_14


title: Gata3_Day4.6.pTEICM_17


title: Gata3_Day4.6.pTEICM_12

value: Epiblast


title: Gata3_Day4.6.pTEICM_11


title: F_P7_normal_CD31_1_DC21_F19

value: distal lung


title: Gata3_Day4.6.pTEICM_16


title: F_P21_normal_mesench_1_DC21_B12

value: F


title: Gata3_Day4.6.pTEICM_19


title: Gata3_Day3.8.pTEICM_3

value: 3 days after stem cells seeded to form cell aggregates


title: F_P7_normal_CD31_1_DC21_M21

value: endothelial


title: Gata3_Day3.8.pTEICM_2


title: F_P7_normal_CD31_1_DC21_L12

value: Late Car4- capillaries


title: F_P7_normal_CD31_1_DC21_N20


title: Gata3_Day4.6.pTEICM_13


title: F_P21_normal_mesench_1_DC21_F7

value: Venous EC


title: F_P7_normal_CD31_1_DC21_I1

value: normal


title: Gata3_Day3.7.mTE_3

value: Blastoid


title: Gata3_Day3.8.pTEICM_1


title: F_P7_normal_CD31_1_DC21_E6


title: Ribo.P4

city: Cambridge

first: Charles

middle: Arthur

last: Whittaker

institute: Koch Institute

data_processing:
Library strategy: Ribo-Seq
The first 3 nucleotides and poly(A) sequences were removed from raw FASTQ reads using Cutadapt v.1.16(63) with options –u 3 -a A{100} –m 12. The trimmed reads were then aligned to a target consisting of K. phaffii rRNA sequences with bwa v0.7.16a. Unaligned reads were extracted with samtools v1.5 and FASTQ files were regenerated with bedtools v.2.26.0. Reads were then aligned to the wild-type K. phaffii genome plus the P[4] or P[6] expression cassettes using STAR v.2.5.3a(59) with the --alignIntronMax 600 option. Secondary alignments were removed using samtools v.1.5 and the primary alignment bam files were used as input to plastid v.0.4.8. Plastid was run according to the author’s documentation and the commands used are available in the file plastid_processing.sh, which can be found in the Github repository jrbrady / PlastidCommands. The read sizes considered ranged between 26 and 31 nt, and an offset of 13 nt was used for all lengths except 26 nt, for which a 12 nt offset was used.
NextSeq500 using v3 chemistry. Software: Control v2.2.0.2, RTA 2.4.11. BCL files were converted to fastq using bcl2qseq. Indexes were split using custom scripts allowing 1 mismatch.
Genome_build: Komagataella phaffi WT (PRJNA304977) with inserted transgenes where indicated
Supplementary_files_format_and_content: jrbrady_RNARibo_intCt.txt.gz is tab delimited integer count data with rows identified by geneID and symbol
Supplementary_files_format_and_content: jrbrady_RNARibo_l2tpm.txt.gz is tab delimited lpg2 tpm data with a plus1 offset with rows identified by geneID and symbol
Supplementary_files_format_and_content: P4.wig_fw.wig.gz is a wiggle format file of depth by position for forward strand reads
Supplementary_files_format_and_content: P4.wig_rc.wig.gz is a wiggle format file of depth by position for reverse strand reads
Supplementary_files_format_and_content: P6.wig_fw.wig.gz is a wiggle format file of depth by position for forward strand reads
Supplementary_files_format_and_content: P6.wig_rc.wig.gz is a wiggle format file of depth by position for reverse strand reads

organism: Komagataella phaffii

source_name: bulk yeast cell culture

growth_protocol: BMGY containing 4% (v/v) glycerol was inoculated from a glycerol stock to an initial OD600 of 0.1 in a 24-well culture plate (Corning, Cat. # P-DW10ML24CS, Corning, NY) and cultured at ambient temperature and 600 rpm shaking. After 24h of biomass accumulation, cells were pelleted and resuspended in BMMY, containing 3% (v/v) methanol as both a carbon source and for induction of heterologous gene expression, for an additional 16h.

extract_protocol:
SMARTer smRNA-Seq Kit (Clontech)
Cell samples from cultures expressing P[4] or P[6] were transferred to a shake-flask containing 500 mL of pre-warmed fresh BMMY media to achieve an OD600 = 0.5. Cell harvest, cell lysis, and recovery of ribosome footprints were performed as described previously (Taggart et al., Cell Syst. 2018). Samples were split following lysis for total RNA-Seq and ribosome profiling (Ribo-Seq).

tag: protein expressed

tag: clone id


title: Ribo.P6