title: DNase-seq from activated CD4-positive, alpha-beta T cell (ENCLB899LZW)

description:
https://www.encodeproject.org/experiments/ENCSR467LJT/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR467LJT
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-10-06
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB899LZW

source_name: Homo sapiens male adult (38 years) activated CD4-positive, alpha-beta T primary cell treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL TNF-alpha for 1 hour

value: John Stamatoyannopoulos, UW

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody; duration:1; duration_units:hour; treatment_term_id:UniProtKB:P01375; treatment_term_name:TNF-alpha; treatment_type:protein; duration:1; duration_units:hour;

value: ENCBS796IDC at ENCODE; https://www.encodeproject.org/ENCBS796IDC/


title: ATAC-seq from liver (ENCLB423CNX)

status: Public on Apr 22 2021

type: SRA

city: Stanford

first: ENCODE

last: DCC

state: CA

address: 300 Pasteur Dr

country: USA

institute: ENCODE DCC

description:
https://www.encodeproject.org/experiments/ENCSR465PYP/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e15.5 mouse liver
experiment encode accession: ENCSR465PYP
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB423CNX
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

library_source: genomic

data_processing: See GSM*_README.txt supplementary file linked below

molecule: genomic DNA

organism: Mus musculus

source_name: Mus musculus strain B6NCrl liver tissue mixed sex embryo (15.5 days)

value: liver

value: tissue

tag: description

value: Liver from 78 embryonic 15.5 day mice

tag: biosample encode accession

tag: age

tag: dev stage

value: embryonic

tag: Sex

value: pooled male and female

tag: health state

value: healthy

tag: lab

value: Len Pennacchio, LBNL

tag: link

value: ENCBS734ENZ at ENCODE; https://www.encodeproject.org/ENCBS734ENZ/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: DNase-seq from cerebellum (ENCLB111DQA)

description:
https://www.encodeproject.org/experiments/ENCSR983KOM/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR983KOM
assay title: DNase-seq
assembly: mm10
encode release date: 2020-09-28
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB111DQA

source_name: Mus musculus strain B6NCrl cerebellum tissue

value: cerebellum

value: not collected

value: unknown

tag: source

value: The Jackson Laboratory

value: ENCBS114THP at ENCODE; https://www.encodeproject.org/ENCBS114THP/


title: ATAC-seq from liver (ENCLB633ZWN)

description:
https://www.encodeproject.org/experiments/ENCSR465PYP/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e15.5 mouse liver
experiment encode accession: ENCSR465PYP
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB633ZWN
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: Liver from 62 embryonic 15.5 day mice

value: ENCBS966PAM at ENCODE; https://www.encodeproject.org/ENCBS966PAM/


title: DNase-seq from activated CD4-positive, alpha-beta T cell (ENCLB606JFY)

description:
https://www.encodeproject.org/experiments/ENCSR010TMX/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR010TMX
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-10-06
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB606JFY

organism: Homo sapiens

source_name: Homo sapiens male adult (42 years) activated CD4-positive, alpha-beta T primary cell treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-2 for 48 hours

value: primary cell

value: male

value: adult

value: 42 year

value: John Stamatoyannopoulos, UW

value: AllCells

tag: treatments

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody; duration:48; duration_units:hour; treatment_term_id:UniProtKB:P60568; treatment_term_name:Interleukin-2; treatment_type:protein; duration:48; duration_units:hour;

value: ENCBS227ZMK at ENCODE; https://www.encodeproject.org/ENCBS227ZMK/

value: Derived from ENCODE donor ENCDO833KUM; https://www.encodeproject.org/ENCDO833KUM/


title: ATAC-seq from neural tube (ENCLB448BWJ)

description:
https://www.encodeproject.org/experiments/ENCSR983JWA/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e15.5 mouse neural tube
experiment encode accession: ENCSR983JWA
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB448BWJ
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl neural tube tissue mixed sex embryo (15.5 days)

value: neural tube

value: tissue

value: Neural tube from 78 embryonic 15.5 day mice

value: embryonic

value: pooled male and female

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS944KEZ at ENCODE; https://www.encodeproject.org/ENCBS944KEZ/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: DNase-seq from activated T-cell (ENCLB190JPB)

description:
https://www.encodeproject.org/experiments/ENCSR466SUZ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR466SUZ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-09-28
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB190JPB

source_name: Homo sapiens male adult (38 years) activated T-cell primary cell treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 50 U/mL Interleukin-2 for 1 hour

value: activated T-cell

value: primary cell

value: male

value: 38 year

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody; duration:1; duration_units:hour; treatment_term_id:UniProtKB:P60568; treatment_term_name:Interleukin-2; treatment_type:protein; duration:1; duration_units:hour;

value: ENCBS028DQF at ENCODE; https://www.encodeproject.org/ENCBS028DQF/

value: Derived from ENCODE donor ENCDO923WRX; https://www.encodeproject.org/ENCDO923WRX/


title: ATAC-seq from kidney (ENCLB553FWL)

description:
https://www.encodeproject.org/experiments/ENCSR732OTZ/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e16.5 mouse kidney
experiment encode accession: ENCSR732OTZ
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB553FWL
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl kidney tissue mixed sex embryo (16.5 days)

value: kidney

value: Kidney pooled from embyonic 16.5 day mice

value: ENCBS519MUD at ENCODE; https://www.encodeproject.org/ENCBS519MUD/


title: ATAC-seq from limb (ENCLB098ZVT)

description:
https://www.encodeproject.org/experiments/ENCSR460BUL/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e14.5 mouse limb
experiment encode accession: ENCSR460BUL
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB098ZVT
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NTac;B6NCrl/Lap limb tissue mixed sex embryo (14.5 days)

value: limb

value: tissue

value: Limb from 24 embryonic 14.5 day mice

value: ENCBS011AAA at ENCODE; https://www.encodeproject.org/ENCBS011AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ATAC-seq from neural tube (ENCLB671DSC)

description:
https://www.encodeproject.org/experiments/ENCSR983JWA/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e15.5 mouse neural tube
experiment encode accession: ENCSR983JWA
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB671DSC
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: neural tube

value: Neural tube from 62 embryonic 15.5 day mice

value: embryonic

value: pooled male and female

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS206NRE at ENCODE; https://www.encodeproject.org/ENCBS206NRE/


title: DNase-seq from activated CD4-positive, alpha-beta T cell (ENCLB154PBD)

description:
https://www.encodeproject.org/experiments/ENCSR734VFU/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR734VFU
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-10-06
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB154PBD

source_name: Homo sapiens male adult (42 years) activated CD4-positive, alpha-beta T primary cell treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-23 for 1 hour, 100 ng/mL Interleukin-1b for 1 hour

value: primary cell

value: male

value: adult

value: 42 year

value: John Stamatoyannopoulos, UW

value: AllCells

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody; duration:1; duration_units:hour; treatment_term_id:UniProtKB:Q9NPF7; treatment_term_name:Interleukin-23; treatment_type:protein; duration:1; duration_units:hour; treatment_term_id:UniProtKB:P01584; treatment_term_name:Interleukin-1b; treatment_type:protein; duration:1; duration_units:hour;

value: ENCBS830QMQ at ENCODE; https://www.encodeproject.org/ENCBS830QMQ/

value: Derived from ENCODE donor ENCDO833KUM; https://www.encodeproject.org/ENCDO833KUM/


title: ATAC-seq from kidney (ENCLB698MZX)

description:
https://www.encodeproject.org/experiments/ENCSR732OTZ/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e16.5 mouse kidney
experiment encode accession: ENCSR732OTZ
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB698MZX
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: kidney

value: tissue

value: Kidney from 41 embyonic 16.5 day mice

value: ENCBS529OHA at ENCODE; https://www.encodeproject.org/ENCBS529OHA/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ATAC-seq from limb (ENCLB178EWS)

description:
https://www.encodeproject.org/experiments/ENCSR460BUL/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e14.5 mouse limb
experiment encode accession: ENCSR460BUL
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB178EWS
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: limb

value: Limb from 34 embryonic 14.5 day mice

value: embryonic

value: pooled male and female

value: healthy

value: ENCBS023AAA at ENCODE; https://www.encodeproject.org/ENCBS023AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ATAC-seq from forebrain (ENCLB997YQF)

description:
https://www.encodeproject.org/experiments/ENCSR976LWP/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e15.5 mouse forebrain
experiment encode accession: ENCSR976LWP
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB997YQF
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl forebrain tissue mixed sex embryo (15.5 days)

value: forebrain

value: Forebrain from 62 embryonic 15.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS841GER at ENCODE; https://www.encodeproject.org/ENCBS841GER/


title: DNase-seq from activated CD4-positive, alpha-beta T cell (ENCLB897MWN)

description:
https://www.encodeproject.org/experiments/ENCSR470QCE/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR470QCE
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-09-23
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB897MWN

source_name: Homo sapiens male adult (38 years) activated CD4-positive, alpha-beta T primary cell treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-12 subunit alpha for 24 hours, 100 ng/mL Interleukin-12 subunit beta for 24 hours

value: primary cell

value: male

value: adult

value: 38 year

value: John Stamatoyannopoulos, UW

value: AllCells

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody; duration:24; duration_units:hour; treatment_term_id:UniProtKB:P29459; treatment_term_name:Interleukin-12 subunit alpha; treatment_type:protein; duration:24; duration_units:hour; treatment_term_id:UniProtKB:P29460; treatment_term_name:Interleukin-12 subunit beta; treatment_type:protein; duration:24; duration_units:hour;

value: ENCBS759WCA at ENCODE; https://www.encodeproject.org/ENCBS759WCA/

value: Derived from ENCODE donor ENCDO923WRX; https://www.encodeproject.org/ENCDO923WRX/


title: ATAC-seq from heart (ENCLB749GLW)

description:
https://www.encodeproject.org/experiments/ENCSR451NAE/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on postnatal p0 mouse heart
experiment encode accession: ENCSR451NAE
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB749GLW
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NTac;B6NCrl/Lap heart tissue mixed sex postnatal (0 days)

value: heart

value: tissue

value: Heart from 15 postnatal 0 day mice

value: 0 day

value: postnatal

value: pooled male and female

value: ENCBS041AAA at ENCODE; https://www.encodeproject.org/ENCBS041AAA/


title: ATAC-seq from intestine (ENCLB539OPC)

description:
https://www.encodeproject.org/experiments/ENCSR966ORC/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e16.5 mouse intestine
experiment encode accession: ENCSR966ORC
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB539OPC
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl intestine tissue mixed sex embryo (16.5 days)

value: intestine

value: Intestine from 41 embyonic 16.5 day mice

value: embryonic

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS072GMU at ENCODE; https://www.encodeproject.org/ENCBS072GMU/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ATAC-seq from heart (ENCLB122XDP)

description:
https://www.encodeproject.org/experiments/ENCSR451NAE/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on postnatal p0 mouse heart
experiment encode accession: ENCSR451NAE
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB122XDP
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: Heart from pooled postnatal 0 day mice

value: ENCBS557AAA at ENCODE; https://www.encodeproject.org/ENCBS557AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: DNase-seq from activated CD4-positive, alpha-beta T cell (ENCLB449CZC)

description:
https://www.encodeproject.org/experiments/ENCSR740DJQ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR740DJQ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-09-23
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB449CZC

source_name: Homo sapiens male adult (42 years) activated CD4-positive, alpha-beta T primary cell treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 50 U/mL Interleukin-2 for 1 hour

value: primary cell

value: male

value: adult

value: 42 year

value: John Stamatoyannopoulos, UW

value: AllCells

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody; duration:1; duration_units:hour; treatment_term_id:UniProtKB:P60568; treatment_term_name:Interleukin-2; treatment_type:protein; duration:1; duration_units:hour;

value: ENCBS669UHA at ENCODE; https://www.encodeproject.org/ENCBS669UHA/

value: Derived from ENCODE donor ENCDO833KUM; https://www.encodeproject.org/ENCDO833KUM/


title: ATAC-seq from forebrain (ENCLB476DGD)

description:
https://www.encodeproject.org/experiments/ENCSR976LWP/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e15.5 mouse forebrain
experiment encode accession: ENCSR976LWP
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB476DGD
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: forebrain

value: tissue

value: Forebrain from 78 embryonic 15.5 day mice

value: embryonic

value: pooled male and female

value: ENCBS811RMD at ENCODE; https://www.encodeproject.org/ENCBS811RMD/


title: ATAC-seq from neural tube (ENCLB772YWR)

description:
https://www.encodeproject.org/experiments/ENCSR700QBR/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e14.5 mouse neural tube
experiment encode accession: ENCSR700QBR
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB772YWR
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NTac;B6NCrl/Lap neural tube tissue mixed sex embryo (14.5 days)

value: neural tube

value: Neural tube from 34 embryonic 14.5 day mice

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS025AAA at ENCODE; https://www.encodeproject.org/ENCBS025AAA/


title: ATAC-seq from neural tube (ENCLB750SGU)

description:
https://www.encodeproject.org/experiments/ENCSR217NOA/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e13.5 mouse neural tube
experiment encode accession: ENCSR217NOA
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB750SGU
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl neural tube tissue mixed sex embryo (13.5 days)

value: Neural tube from embryonic 13.5 day mice

value: ENCBS549OYR at ENCODE; https://www.encodeproject.org/ENCBS549OYR/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ATAC-seq from neural tube (ENCLB454TUX)

description:
https://www.encodeproject.org/experiments/ENCSR690VOH/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e12.5 mouse neural tube
experiment encode accession: ENCSR690VOH
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB454TUX
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl neural tube tissue mixed sex embryo (12.5 days)

value: Neural tube from 120 embryonic 12.5 day mice

value: ENCBS405OOH at ENCODE; https://www.encodeproject.org/ENCBS405OOH/


title: ATAC-seq from intestine (ENCLB298CHP)

description:
https://www.encodeproject.org/experiments/ENCSR961SMM/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e15.5 mouse intestine
experiment encode accession: ENCSR961SMM
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB298CHP
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl intestine tissue mixed sex embryo (15.5 days)

value: intestine

value: Intestine from 78 embryonic 15.5 day mice

value: ENCBS401LLS at ENCODE; https://www.encodeproject.org/ENCBS401LLS/


title: ATAC-seq from intestine (ENCLB594LAJ)

description:
https://www.encodeproject.org/experiments/ENCSR961SMM/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e15.5 mouse intestine
experiment encode accession: ENCSR961SMM
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB594LAJ
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: tissue

value: Intestine from 62 embryonic 15.5 day mice

value: ENCBS836WEU at ENCODE; https://www.encodeproject.org/ENCBS836WEU/


title: DNase-seq from vagina (ENCLB072TCE)

description:
https://www.encodeproject.org/experiments/ENCSR733YNW/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR733YNW
assay title: DNase-seq
assembly: GRCh38, hg19
encode release date: 2017-11-01
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB072TCE

source_name: Homo sapiens female adult (51 years) vagina tissue

value: vagina

value: female

value: adult

value: 51 year

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS163TED at ENCODE; https://www.encodeproject.org/ENCBS163TED/

value: Derived from ENCODE donor ENCDO271OUW; https://www.encodeproject.org/ENCDO271OUW/


title: ATAC-seq from midbrain (ENCLB296UDQ)

description:
https://www.encodeproject.org/experiments/ENCSR211OCS/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on postnatal p0 mouse midbrain
experiment encode accession: ENCSR211OCS
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB296UDQ
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NTac;B6NCrl/Lap midbrain tissue mixed sex postnatal (0 days)

value: midbrain

value: Midbrain from pooled postnatal 0 day mice

value: 0 day

value: postnatal

value: pooled male and female

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS555AAA at ENCODE; https://www.encodeproject.org/ENCBS555AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ATAC-seq from midbrain (ENCLB290KSM)

description:
https://www.encodeproject.org/experiments/ENCSR211OCS/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on postnatal p0 mouse midbrain
experiment encode accession: ENCSR211OCS
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB290KSM
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: tissue

value: Midbrain from 15 postnatal 0 day mice

value: ENCBS039AAA at ENCODE; https://www.encodeproject.org/ENCBS039AAA/


title: DNase-seq from cortex (ENCLB424TKA)

description:
https://www.encodeproject.org/experiments/ENCSR432XZX/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR432XZX
assay title: DNase-seq
assembly: mm10
encode release date: 2020-09-28
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB424TKA

source_name: Mus musculus strain B6NCrl cortex tissue

value: cortex

value: not collected

value: unknown

value: The Jackson Laboratory

value: ENCBS812GRZ at ENCODE; https://www.encodeproject.org/ENCBS812GRZ/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ATAC-seq from kidney (ENCLB678YRF)

description:
https://www.encodeproject.org/experiments/ENCSR389CLN/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on postnatal p0 mouse kidney
experiment encode accession: ENCSR389CLN
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB678YRF
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NTac;B6NCrl/Lap kidney tissue mixed sex postnatal (0 days)

value: kidney

value: Kidney from 15 postnatal 0 day mice

value: ENCBS046AAA at ENCODE; https://www.encodeproject.org/ENCBS046AAA/


title: ATAC-seq from limb (ENCLB591GMS)

description:
https://www.encodeproject.org/experiments/ENCSR204ZTY/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e15.5 mouse limb
experiment encode accession: ENCSR204ZTY
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB591GMS
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl limb tissue mixed sex embryo (15.5 days)

value: limb

value: Limb from 62 embryonic 15.5 day mice

value: embryonic

value: pooled male and female

value: ENCBS696JKV at ENCODE; https://www.encodeproject.org/ENCBS696JKV/


title: ATAC-seq from kidney (ENCLB497HBT)

description:
https://www.encodeproject.org/experiments/ENCSR389CLN/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on postnatal p0 mouse kidney
experiment encode accession: ENCSR389CLN
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB497HBT
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: tissue

value: Kidney from pooled postnatal 0 day mice

value: 0 day

value: postnatal

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS562AAA at ENCODE; https://www.encodeproject.org/ENCBS562AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ATAC-seq from limb (ENCLB358RYO)

description:
https://www.encodeproject.org/experiments/ENCSR204ZTY/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e15.5 mouse limb
experiment encode accession: ENCSR204ZTY
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB358RYO
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: Limb from 78 embryonic 15.5 day mice

value: ENCBS735QNY at ENCODE; https://www.encodeproject.org/ENCBS735QNY/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ATAC-seq from lung (ENCLB712AUO)

description:
https://www.encodeproject.org/experiments/ENCSR668EIA/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e15.5 mouse lung
experiment encode accession: ENCSR668EIA
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB712AUO
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl lung tissue mixed sex embryo (15.5 days)

value: lung

value: Lung from 62 embryonic 15.5 day mice

value: ENCBS217WPC at ENCODE; https://www.encodeproject.org/ENCBS217WPC/


title: ATAC-seq from hindbrain (ENCLB538DEZ)

description:
https://www.encodeproject.org/experiments/ENCSR662KNY/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e15.5 mouse hindbrain
experiment encode accession: ENCSR662KNY
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB538DEZ
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl hindbrain tissue mixed sex embryo (15.5 days)

value: hindbrain

value: Hindbrain from 78 embryonic 15.5 day mice

value: embryonic

value: ENCBS958AHU at ENCODE; https://www.encodeproject.org/ENCBS958AHU/


title: DNase-seq from embryo (ENCLB308CBI)

description:
https://www.encodeproject.org/experiments/ENCSR687JCD/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR687JCD
assay title: DNase-seq
assembly: mm10
encode release date: 2017-11-01
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB308CBI
instrument models: Illumina HiSeq 4000,Illumina NextSeq 500

source_name: Mus musculus strain B6NCrl mixed sex embryo (9.5 days) embryo tissue

value: embryo

value: tissue

value: pooled male and female

value: 9.5 day

value: John Stamatoyannopoulos, UW

value: Mark Groudine

value: ENCBS677GFP at ENCODE; https://www.encodeproject.org/ENCBS677GFP/


title: ATAC-seq from lung (ENCLB554JEM)

description:
https://www.encodeproject.org/experiments/ENCSR668EIA/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e15.5 mouse lung
experiment encode accession: ENCSR668EIA
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB554JEM
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: Lung from 78 embryonic 15.5 day mice

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS467HSM at ENCODE; https://www.encodeproject.org/ENCBS467HSM/


title: ATAC-seq from hindbrain (ENCLB079ZQQ)

description:
https://www.encodeproject.org/experiments/ENCSR176BYZ/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e13.5 mouse hindbrain
experiment encode accession: ENCSR176BYZ
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB079ZQQ
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl hindbrain tissue mixed sex embryo (13.5 days)

value: Hindbrain from embryonic 13.5 day mice

value: ENCBS052EWC at ENCODE; https://www.encodeproject.org/ENCBS052EWC/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ATAC-seq from neural tube (ENCLB606GVG)

description:
https://www.encodeproject.org/experiments/ENCSR700QBR/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e14.5 mouse neural tube
experiment encode accession: ENCSR700QBR
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB606GVG
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NTac;B6NCrl/Lap mixed sex embryo (14.5 days) neural tube tissue

value: neural tube

value: Neural tube from 17 embryonic 14.5 day mice

value: Len Pennacchio

value: ENCBS037AAA at ENCODE; https://www.encodeproject.org/ENCBS037AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ATAC-seq from intestine (ENCLB448PET)

description:
https://www.encodeproject.org/experiments/ENCSR966ORC/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e16.5 mouse intestine
experiment encode accession: ENCSR966ORC
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB448PET
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: intestine

value: tissue

value: Intestine pooled from embyonic 16.5 day mice

value: embryonic

value: pooled male and female

value: ENCBS856EWN at ENCODE; https://www.encodeproject.org/ENCBS856EWN/


title: ATAC-seq from midbrain (ENCLB555CNQ)

description:
https://www.encodeproject.org/experiments/ENCSR384JBF/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e14.5 mouse midbrain
experiment encode accession: ENCSR384JBF
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB555CNQ
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NTac;B6NCrl/Lap midbrain tissue mixed sex embryo (14.5 days)

value: midbrain

value: Midbrain from 34 embryonic 14.5 day mice

value: healthy

value: ENCBS015AAA at ENCODE; https://www.encodeproject.org/ENCBS015AAA/


title: ATAC-seq from midbrain (ENCLB278SCS)

description:
https://www.encodeproject.org/experiments/ENCSR384JBF/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e14.5 mouse midbrain
experiment encode accession: ENCSR384JBF
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB278SCS
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: Midbrain from 24 embryonic 14.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS003AAA at ENCODE; https://www.encodeproject.org/ENCBS003AAA/


title: DNase-seq from neural tube (ENCLB254EFC)

description:
https://www.encodeproject.org/experiments/ENCSR661GMU/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR661GMU
assay title: DNase-seq
assembly: mm10
encode release date: 2017-09-26
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB254EFC
instrument models: Illumina HiSeq 4000,Illumina NextSeq 500

source_name: Mus musculus strain B6NCrl mixed sex embryo (10.5 days) neural tube tissue

value: neural tube

value: John Stamatoyannopoulos, UW

value: Mark Groudine

value: ENCBS951RGB at ENCODE; https://www.encodeproject.org/ENCBS951RGB/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ATAC-seq from neural tube (ENCLB512LSH)

description:
https://www.encodeproject.org/experiments/ENCSR217NOA/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e13.5 mouse neural tube
experiment encode accession: ENCSR217NOA
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB512LSH
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: tissue

value: Neural tube from embryonic 13.5 day mice

value: ENCBS956BQY at ENCODE; https://www.encodeproject.org/ENCBS956BQY/


title: ATAC-seq from midbrain (ENCLB664GGY)

description:
https://www.encodeproject.org/experiments/ENCSR382RUC/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e11.5 mouse midbrain
experiment encode accession: ENCSR382RUC
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB664GGY
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl midbrain tissue mixed sex embryo (11.5 days)

value: Midbrain from 88 embyronic 11.5 day mice

value: embryonic

value: pooled male and female

value: ENCBS802FTI at ENCODE; https://www.encodeproject.org/ENCBS802FTI/


title: ATAC-seq from hindbrain (ENCLB558GZX)

description:
https://www.encodeproject.org/experiments/ENCSR176BYZ/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e13.5 mouse hindbrain
experiment encode accession: ENCSR176BYZ
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB558GZX
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: hindbrain

value: Hindbrain from embryonic 13.5 day mice

value: healthy

value: ENCBS296PIR at ENCODE; https://www.encodeproject.org/ENCBS296PIR/


title: DNase-seq from neural tube (ENCLB497CTG)

description:
https://www.encodeproject.org/experiments/ENCSR661GMU/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR661GMU
assay title: DNase-seq
assembly: mm10
encode release date: 2017-09-26
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB497CTG

value: ENCBS781MBW at ENCODE; https://www.encodeproject.org/ENCBS781MBW/


title: ATAC-seq from neural tube (ENCLB975CWE)

description:
https://www.encodeproject.org/experiments/ENCSR690VOH/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e12.5 mouse neural tube
experiment encode accession: ENCSR690VOH
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB975CWE
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: neural tube

value: Neural tube from 88 embryonic 12.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS254TSW at ENCODE; https://www.encodeproject.org/ENCBS254TSW/


title: DNase-seq from limb (ENCLB130TOX)

description:
https://www.encodeproject.org/experiments/ENCSR380VCU/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR380VCU
assay title: DNase-seq
assembly: mm10
encode release date: 2017-09-26
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB130TOX
instrument models: Illumina HiSeq 4000,Illumina NextSeq 500

source_name: Mus musculus strain B6NCrl mixed sex embryo (10.5 days) limb tissue

value: limb

value: John Stamatoyannopoulos, UW

value: Mark Groudine

value: ENCBS568XJZ at ENCODE; https://www.encodeproject.org/ENCBS568XJZ/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: DNase-seq from limb (ENCLB026WPV)

description:
https://www.encodeproject.org/experiments/ENCSR380VCU/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR380VCU
assay title: DNase-seq
assembly: mm10
encode release date: 2017-09-26
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB026WPV
instrument models: Illumina HiSeq 4000,Illumina NextSeq 500

value: tissue

value: embryonic

value: ENCBS390HKQ at ENCODE; https://www.encodeproject.org/ENCBS390HKQ/


title: ATAC-seq from midbrain (ENCLB534QZD)

description:
https://www.encodeproject.org/experiments/ENCSR382RUC/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e11.5 mouse midbrain
experiment encode accession: ENCSR382RUC
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB534QZD
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: midbrain

value: Midbrain of 109 embyronic 11.5 day mice

value: pooled male and female

value: ENCBS228OBS at ENCODE; https://www.encodeproject.org/ENCBS228OBS/


title: ATAC-seq from hindbrain (ENCLB515XAE)

description:
https://www.encodeproject.org/experiments/ENCSR662KNY/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e15.5 mouse hindbrain
experiment encode accession: ENCSR662KNY
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB515XAE
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: hindbrain

value: Hindbrain from 62 embryonic 15.5 day mice

value: healthy

value: ENCBS948UKU at ENCODE; https://www.encodeproject.org/ENCBS948UKU/


title: ATAC-seq from forebrain (ENCLB429FVW)

description:
https://www.encodeproject.org/experiments/ENCSR903GMO/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e13.5 mouse forebrain
experiment encode accession: ENCSR903GMO
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB429FVW
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl forebrain tissue mixed sex embryo (13.5 days)

value: forebrain

value: Forebrain from embryonic 13.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS273RVL at ENCODE; https://www.encodeproject.org/ENCBS273RVL/


title: ATAC-seq from limb (ENCLB327FUE)

description:
https://www.encodeproject.org/experiments/ENCSR377YDY/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e11.5 mouse limb
experiment encode accession: ENCSR377YDY
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB327FUE
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl limb tissue mixed sex embryo (11.5 days)

value: limb

value: Limb from 88 embyronic 11.5 day mice

value: ENCBS681XPR at ENCODE; https://www.encodeproject.org/ENCBS681XPR/


title: ATAC-seq from limb (ENCLB908GWV)

description:
https://www.encodeproject.org/experiments/ENCSR896XIN/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e13.5 mouse limb
experiment encode accession: ENCSR896XIN
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB908GWV
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl limb tissue mixed sex embryo (13.5 days)

value: tissue

value: Limb from embryonic 13.5 day mice

value: embryonic

value: ENCBS176PGP at ENCODE; https://www.encodeproject.org/ENCBS176PGP/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ATAC-seq from midbrain (ENCLB050BRU)

description:
https://www.encodeproject.org/experiments/ENCSR154BXN/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e12.5 mouse midbrain
experiment encode accession: ENCSR154BXN
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB050BRU
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl midbrain tissue mixed sex embryo (12.5 days)

value: midbrain

value: Midbrain from 88 embryonic 12.5 day mice

value: pooled male and female

value: ENCBS280TPA at ENCODE; https://www.encodeproject.org/ENCBS280TPA/


title: ATAC-seq from limb (ENCLB467PZI)

description:
https://www.encodeproject.org/experiments/ENCSR896XIN/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e13.5 mouse limb
experiment encode accession: ENCSR896XIN
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB467PZI
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: healthy

value: ENCBS896ZED at ENCODE; https://www.encodeproject.org/ENCBS896ZED/


title: ATAC-seq from midbrain (ENCLB618YHF)

description:
https://www.encodeproject.org/experiments/ENCSR154BXN/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e12.5 mouse midbrain
experiment encode accession: ENCSR154BXN
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB618YHF
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: Midbrain from 120 embryonic 12.5 day mice

value: ENCBS309WCU at ENCODE; https://www.encodeproject.org/ENCBS309WCU/


title: ATAC-seq from forebrain (ENCLB589ZDE)

description:
https://www.encodeproject.org/experiments/ENCSR903GMO/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e13.5 mouse forebrain
experiment encode accession: ENCSR903GMO
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB589ZDE
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: forebrain

value: Forebrain from embryonic 13.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS793ZRY at ENCODE; https://www.encodeproject.org/ENCBS793ZRY/


title: ATAC-seq from heart (ENCLB386LRA)

description:
https://www.encodeproject.org/experiments/ENCSR371KFW/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e16.5 mouse heart
experiment encode accession: ENCSR371KFW
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB386LRA
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl heart tissue mixed sex embryo (16.5 days)

value: heart

value: tissue

value: Heart pooled from embyonic 16.5 day mice

value: ENCBS955JPC at ENCODE; https://www.encodeproject.org/ENCBS955JPC/


title: ATAC-seq from embryonic facial prominence (ENCLB581HEB)

description:
https://www.encodeproject.org/experiments/ENCSR150RMQ/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e11.5 mouse embryonic facial prominence
experiment encode accession: ENCSR150RMQ
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB581HEB
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl embryonic facial prominence tissue mixed sex embryo (11.5 days)

value: embryonic facial prominence

value: Craniofacial prominence from 88 embyronic 11.5 day mice

value: embryonic

value: ENCBS468NAL at ENCODE; https://www.encodeproject.org/ENCBS468NAL/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ATAC-seq from heart (ENCLB268QYI)

description:
https://www.encodeproject.org/experiments/ENCSR371KFW/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e16.5 mouse heart
experiment encode accession: ENCSR371KFW
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB268QYI
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: Heart from 41 embyonic 16.5 day mice

value: pooled male and female

value: healthy

value: ENCBS217XWR at ENCODE; https://www.encodeproject.org/ENCBS217XWR/


title: ATAC-seq from embryonic facial prominence (ENCLB258PGQ)

description:
https://www.encodeproject.org/experiments/ENCSR150RMQ/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e11.5 mouse embryonic facial prominence
experiment encode accession: ENCSR150RMQ
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB258PGQ
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: Craniofacial prominence from 109 embyronic 11.5 day mice

value: ENCBS141GPQ at ENCODE; https://www.encodeproject.org/ENCBS141GPQ/


title: ATAC-seq from intestine (ENCLB325XDP)

description:
https://www.encodeproject.org/experiments/ENCSR150EOO/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e14.5 mouse intestine
experiment encode accession: ENCSR150EOO
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB325XDP
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NTac;B6NCrl/Lap intestine tissue mixed sex embryo (14.5 days)

value: intestine

value: Intestine from 34 embryonic 14.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS020AAA at ENCODE; https://www.encodeproject.org/ENCBS020AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ATAC-seq from heart (ENCLB030OLH)

description:
https://www.encodeproject.org/experiments/ENCSR652CNN/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e12.5 mouse heart
experiment encode accession: ENCSR652CNN
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB030OLH
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl heart tissue mixed sex embryo (12.5 days)

value: heart

value: tissue

value: Heart from 12.5 day mice

value: ENCBS452TDN at ENCODE; https://www.encodeproject.org/ENCBS452TDN/


title: ATAC-seq from heart (ENCLB238LPB)

description:
https://www.encodeproject.org/experiments/ENCSR652CNN/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e12.5 mouse heart
experiment encode accession: ENCSR652CNN
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB238LPB
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: embryonic

value: ENCBS004ZLN at ENCODE; https://www.encodeproject.org/ENCBS004ZLN/


title: ATAC-seq from intestine (ENCLB069VWJ)

description:
https://www.encodeproject.org/experiments/ENCSR150EOO/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e14.5 mouse intestine
experiment encode accession: ENCSR150EOO
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB069VWJ
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NTac;B6NCrl/Lap mixed sex embryo (14.5 days) intestine tissue

value: Intestine from 17 embryonic 14.5 day mice

value: Len Pennacchio

value: ENCBS032AAA at ENCODE; https://www.encodeproject.org/ENCBS032AAA/


title: ATAC-seq from embryonic facial prominence (ENCLB975YXF)

description:
https://www.encodeproject.org/experiments/ENCSR876SYO/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e14.5 mouse embryonic facial prominence
experiment encode accession: ENCSR876SYO
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB975YXF
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NTac;B6NCrl/Lap embryonic facial prominence tissue mixed sex embryo (14.5 days)

value: embryonic facial prominence

value: Craniofacial prominence from 34 embryonic 14.5 day mice

value: pooled male and female

value: healthy

value: ENCBS024AAA at ENCODE; https://www.encodeproject.org/ENCBS024AAA/


title: ATAC-seq from stomach (ENCLB280GIO)

description:
https://www.encodeproject.org/experiments/ENCSR363SKQ/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e16.5 mouse stomach
experiment encode accession: ENCSR363SKQ
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB280GIO
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl stomach tissue mixed sex embryo (16.5 days)

value: stomach

value: Stomach pooled from embyonic 16.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS243DCE at ENCODE; https://www.encodeproject.org/ENCBS243DCE/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ATAC-seq from lung (ENCLB481OLK)

description:
https://www.encodeproject.org/experiments/ENCSR627OCR/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e16.5 mouse lung
experiment encode accession: ENCSR627OCR
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB481OLK
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl lung tissue mixed sex embryo (16.5 days)

value: lung

value: tissue

value: Lung pooled from embyonic 16.5 day mice

value: ENCBS377RBN at ENCODE; https://www.encodeproject.org/ENCBS377RBN/


title: ATAC-seq from lung (ENCLB229NOX)

description:
https://www.encodeproject.org/experiments/ENCSR627OCR/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e16.5 mouse lung
experiment encode accession: ENCSR627OCR
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB229NOX
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: Lung from 41 embyonic 16.5 day mice

value: embryonic

value: ENCBS833ZFI at ENCODE; https://www.encodeproject.org/ENCBS833ZFI/


title: ATAC-seq from embryonic facial prominence (ENCLB250QOF)

description:
https://www.encodeproject.org/experiments/ENCSR876SYO/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e14.5 mouse embryonic facial prominence
experiment encode accession: ENCSR876SYO
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB250QOF
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: embryonic facial prominence

value: Craniofacial prominence from 24 embryonic 14.5 day mice

value: ENCBS012AAA at ENCODE; https://www.encodeproject.org/ENCBS012AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ATAC-seq from embryonic facial prominence (ENCLB412DVS)

description:
https://www.encodeproject.org/experiments/ENCSR358MOW/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e13.5 mouse embryonic facial prominence
experiment encode accession: ENCSR358MOW
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB412DVS
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl embryonic facial prominence tissue mixed sex embryo (13.5 days)

value: Embryonic facial prominence from embryonic 13.5 day mice

value: pooled male and female

value: healthy

value: ENCBS847MIW at ENCODE; https://www.encodeproject.org/ENCBS847MIW/


title: ATAC-seq from hindbrain (ENCLB383AFC)

description:
https://www.encodeproject.org/experiments/ENCSR623GSD/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e16.5 mouse hindbrain
experiment encode accession: ENCSR623GSD
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB383AFC
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl hindbrain tissue mixed sex embryo (16.5 days)

value: hindbrain

value: Hindbrain pooled from embyonic 16.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS436LSH at ENCODE; https://www.encodeproject.org/ENCBS436LSH/


title: ATAC-seq from limb (ENCLB020KTH)

description:
https://www.encodeproject.org/experiments/ENCSR377YDY/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e11.5 mouse limb
experiment encode accession: ENCSR377YDY
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB020KTH
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: limb

value: tissue

value: Limb from 109 embyronic 11.5 day mice

value: ENCBS066IEL at ENCODE; https://www.encodeproject.org/ENCBS066IEL/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ATAC-seq from stomach (ENCLB322JPD)

description:
https://www.encodeproject.org/experiments/ENCSR618HDK/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e14.5 mouse stomach
experiment encode accession: ENCSR618HDK
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB322JPD
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NTac;B6NCrl/Lap stomach tissue mixed sex embryo (14.5 days)

value: stomach

value: Stomach pooled from embryonic 14.5 day mice

value: embryonic

value: ENCBS568AAA at ENCODE; https://www.encodeproject.org/ENCBS568AAA/


title: ATAC-seq from hindbrain (ENCLB478RAK)

description:
https://www.encodeproject.org/experiments/ENCSR623GSD/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e16.5 mouse hindbrain
experiment encode accession: ENCSR623GSD
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB478RAK
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: Hindbrain from 37 embryonic 16.5 day mice

value: ENCBS281ZLI at ENCODE; https://www.encodeproject.org/ENCBS281ZLI/


title: ATAC-seq from stomach (ENCLB880WNY)

description:
https://www.encodeproject.org/experiments/ENCSR618HDK/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e14.5 mouse stomach
experiment encode accession: ENCSR618HDK
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB880WNY
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: pooled male and female

value: healthy

value: ENCBS564AAA at ENCODE; https://www.encodeproject.org/ENCBS564AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: DNase-seq from yolk sac (ENCLB268SEP)

description:
https://www.encodeproject.org/experiments/ENCSR894HWV/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR894HWV
assay title: DNase-seq
assembly: mm10
encode release date: 2017-11-01
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB268SEP
instrument models: Illumina HiSeq 4000,Illumina NextSeq 500

source_name: Mus musculus strain B6NCrl mixed sex embryo (10.5 days) yolk sac tissue

value: yolk sac

value: John Stamatoyannopoulos, UW

value: Mark Groudine

value: ENCBS590QLJ at ENCODE; https://www.encodeproject.org/ENCBS590QLJ/


title: ATAC-seq from forebrain (ENCLB194THE)

description:
https://www.encodeproject.org/experiments/ENCSR836PUC/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e16.5 mouse forebrain
experiment encode accession: ENCSR836PUC
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB194THE
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl forebrain tissue mixed sex embryo (16.5 days)

value: forebrain

value: tissue

value: Forebrain pooled from embyonic 16.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS156DHU at ENCODE; https://www.encodeproject.org/ENCBS156DHU/


title: ATAC-seq from lung (ENCLB080OEI)

description:
https://www.encodeproject.org/experiments/ENCSR102NGD/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on postnatal p0 mouse lung
experiment encode accession: ENCSR102NGD
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB080OEI
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NTac;B6NCrl/Lap lung tissue mixed sex postnatal (0 days)

value: lung

value: Lung from 15 postnatal 0 day mice

value: 0 day

value: postnatal

value: ENCBS042AAA at ENCODE; https://www.encodeproject.org/ENCBS042AAA/


title: ATAC-seq from liver (ENCLB303HHQ)

description:
https://www.encodeproject.org/experiments/ENCSR609OHJ/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on postnatal p0 mouse liver
experiment encode accession: ENCSR609OHJ
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB303HHQ
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NTac;B6NCrl/Lap liver tissue mixed sex postnatal (0 days)

value: liver

value: Liver from 15 postnatal 0 day mice

value: pooled male and female

value: healthy

value: ENCBS043AAA at ENCODE; https://www.encodeproject.org/ENCBS043AAA/


title: ATAC-seq from lung (ENCLB071NVJ)

description:
https://www.encodeproject.org/experiments/ENCSR102NGD/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on postnatal p0 mouse lung
experiment encode accession: ENCSR102NGD
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB071NVJ
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: Lung from pooled postnatal 0 day mice

value: ENCBS558AAA at ENCODE; https://www.encodeproject.org/ENCBS558AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ATAC-seq from midbrain (ENCLB277UUA)

description:
https://www.encodeproject.org/experiments/ENCSR096JCC/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e16.5 mouse midbrain
experiment encode accession: ENCSR096JCC
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB277UUA
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl midbrain tissue mixed sex embryo (16.5 days)

value: midbrain

value: tissue

value: Midbrain pooled from embyonic 16.5 day mice

value: embryonic

value: ENCBS684MLE at ENCODE; https://www.encodeproject.org/ENCBS684MLE/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ATAC-seq from heart (ENCLB223LXB)

description:
https://www.encodeproject.org/experiments/ENCSR603MWL/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e15.5 mouse heart
experiment encode accession: ENCSR603MWL
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB223LXB
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl heart tissue mixed sex embryo (15.5 days)

value: heart

value: Heart from 78 embryonic 15.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS595EMK at ENCODE; https://www.encodeproject.org/ENCBS595EMK/


title: ATAC-seq from stomach (ENCLB082IHZ)

description:
https://www.encodeproject.org/experiments/ENCSR363SKQ/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e16.5 mouse stomach
experiment encode accession: ENCSR363SKQ
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB082IHZ
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: stomach

value: Stomach from 41 embyonic 16.5 day mice

value: ENCBS793TEW at ENCODE; https://www.encodeproject.org/ENCBS793TEW/


title: ATAC-seq from heart (ENCLB030JRW)

description:
https://www.encodeproject.org/experiments/ENCSR603MWL/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e15.5 mouse heart
experiment encode accession: ENCSR603MWL
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB030JRW
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: Heart from 62 embryonic 15.5 day mice

value: pooled male and female

value: healthy

value: ENCBS909LOF at ENCODE; https://www.encodeproject.org/ENCBS909LOF/


title: ATAC-seq from liver (ENCLB024CQF)

description:
https://www.encodeproject.org/experiments/ENCSR343TXK/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e13.5 mouse liver
experiment encode accession: ENCSR343TXK
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB024CQF
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl liver tissue mixed sex embryo (13.5 days)

value: liver

value: Liver from embryonic 13.5 day mice

value: ENCBS373XWZ at ENCODE; https://www.encodeproject.org/ENCBS373XWZ/


title: ATAC-seq from midbrain (ENCLB488AGB)

description:
https://www.encodeproject.org/experiments/ENCSR096JCC/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e16.5 mouse midbrain
experiment encode accession: ENCSR096JCC
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB488AGB
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: midbrain

value: tissue

value: Midbrain from 37 embryonic 16.5 day mice

value: embryonic

value: ENCBS463JSE at ENCODE; https://www.encodeproject.org/ENCBS463JSE/


title: ATAC-seq from lung (ENCLB224FWZ)

description:
https://www.encodeproject.org/experiments/ENCSR335VJW/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e14.5 mouse lung
experiment encode accession: ENCSR335VJW
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB224FWZ
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NTac;B6NCrl/Lap lung tissue mixed sex embryo (14.5 days)

value: lung

value: Lung from 34 embryonic 14.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS018AAA at ENCODE; https://www.encodeproject.org/ENCBS018AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ATAC-seq from embryonic facial prominence (ENCLB297PYC)

description:
https://www.encodeproject.org/experiments/ENCSR358MOW/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e13.5 mouse embryonic facial prominence
experiment encode accession: ENCSR358MOW
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB297PYC
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: embryonic facial prominence

value: Embryonic facial prominence from embryonic 13.5 day mice

value: ENCBS764ZZN at ENCODE; https://www.encodeproject.org/ENCBS764ZZN/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ATAC-seq from stomach (ENCLB105JML)

description:
https://www.encodeproject.org/experiments/ENCSR597BGP/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on postnatal p0 mouse stomach
experiment encode accession: ENCSR597BGP
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB105JML
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NTac;B6NCrl/Lap stomach tissue mixed sex postnatal (0 days)

value: stomach

value: Stomach from pooled postnatal 0 day mice

value: 0 day

value: postnatal

value: pooled male and female

value: healthy

value: ENCBS561AAA at ENCODE; https://www.encodeproject.org/ENCBS561AAA/


title: ATAC-seq from hindbrain (ENCLB790VLV)

description:
https://www.encodeproject.org/experiments/ENCSR088UYE/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e12.5 mouse hindbrain
experiment encode accession: ENCSR088UYE
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB790VLV
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl hindbrain tissue mixed sex embryo (12.5 days)

value: hindbrain

value: tissue

value: Hindbrain from 88 embryonic 12.5 day mice

value: embryonic

value: ENCBS022IBY at ENCODE; https://www.encodeproject.org/ENCBS022IBY/


title: ATAC-seq from stomach (ENCLB490MGZ)

description:
https://www.encodeproject.org/experiments/ENCSR597BGP/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on postnatal p0 mouse stomach
experiment encode accession: ENCSR597BGP
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB490MGZ
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: Stomach from 15 postnatal 0 day mice

value: Len Pennacchio, LBNL

value: ENCBS045AAA at ENCODE; https://www.encodeproject.org/ENCBS045AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ATAC-seq from forebrain (ENCLB055ONH)

description:
https://www.encodeproject.org/experiments/ENCSR836PUC/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e16.5 mouse forebrain
experiment encode accession: ENCSR836PUC
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB055ONH
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: forebrain

value: Forebrain from 41 embyonic 16.5 day mice

value: ENCBS512LKA at ENCODE; https://www.encodeproject.org/ENCBS512LKA/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ATAC-seq from hindbrain (ENCLB264QMJ)

description:
https://www.encodeproject.org/experiments/ENCSR088UYE/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e12.5 mouse hindbrain
experiment encode accession: ENCSR088UYE
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB264QMJ
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: Hindbrain from 120 embryonic 12.5 day mice

value: ENCBS406RIE at ENCODE; https://www.encodeproject.org/ENCBS406RIE/


title: ATAC-seq from heart (ENCLB010DPI)

description:
https://www.encodeproject.org/experiments/ENCSR820ACB/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e11.5 mouse heart
experiment encode accession: ENCSR820ACB
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB010DPI
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl mixed sex embryo (11.5 days) heart tissue

value: heart

value: Heart from 162 embyronic 11.5 day mice

value: pooled male and female

value: Len Pennacchio

value: healthy

value: ENCBS019PUH at ENCODE; https://www.encodeproject.org/ENCBS019PUH/


title: ATAC-seq from midbrain (ENCLB091EMS)

description:
https://www.encodeproject.org/experiments/ENCSR819QOJ/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e13.5 mouse midbrain
experiment encode accession: ENCSR819QOJ
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB091EMS
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl midbrain tissue mixed sex embryo (13.5 days)

value: midbrain

value: tissue

value: Midbrain from embryonic 13.5 day mice

value: embryonic

value: ENCBS185VNZ at ENCODE; https://www.encodeproject.org/ENCBS185VNZ/


title: ATAC-seq from midbrain (ENCLB849TXF)

description:
https://www.encodeproject.org/experiments/ENCSR819QOJ/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e13.5 mouse midbrain
experiment encode accession: ENCSR819QOJ
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB849TXF
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: Len Pennacchio, LBNL

value: ENCBS725LVX at ENCODE; https://www.encodeproject.org/ENCBS725LVX/


title: ATAC-seq from heart (ENCLB452UUD)

description:
https://www.encodeproject.org/experiments/ENCSR820ACB/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e11.5 mouse heart
experiment encode accession: ENCSR820ACB
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB452UUD
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl heart tissue mixed sex embryo (11.5 days)

value: Heart from embryonic 11.5 day mice

value: ENCBS046IMM at ENCODE; https://www.encodeproject.org/ENCBS046IMM/


title: ATAC-seq from liver (ENCLB282VPH)

description:
https://www.encodeproject.org/experiments/ENCSR609OHJ/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on postnatal p0 mouse liver
experiment encode accession: ENCSR609OHJ
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB282VPH
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: liver

value: Liver from pooled postnatal 0 day mice

value: 0 day

value: postnatal

value: ENCBS559AAA at ENCODE; https://www.encodeproject.org/ENCBS559AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ATAC-seq from liver (ENCLB291AYM)

description:
https://www.encodeproject.org/experiments/ENCSR343TXK/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e13.5 mouse liver
experiment encode accession: ENCSR343TXK
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB291AYM
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: Liver from embryonic 13.5 day mice

value: pooled male and female

value: healthy

value: ENCBS146FGW at ENCODE; https://www.encodeproject.org/ENCBS146FGW/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ATAC-seq from hindbrain (ENCLB962LKQ)

description:
https://www.encodeproject.org/experiments/ENCSR312LQX/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on postnatal p0 mouse hindbrain
experiment encode accession: ENCSR312LQX
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB962LKQ
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NTac;B6NCrl/Lap hindbrain tissue mixed sex postnatal (0 days)

value: hindbrain

value: tissue

value: Hindbrain from pooled postnatal 0 day mice

value: ENCBS556AAA at ENCODE; https://www.encodeproject.org/ENCBS556AAA/


title: ATAC-seq from forebrain (ENCLB252ZLC)

description:
https://www.encodeproject.org/experiments/ENCSR810HQR/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e14.5 mouse forebrain
experiment encode accession: ENCSR810HQR
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB252ZLC
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NTac;B6NCrl/Lap forebrain tissue mixed sex embryo (14.5 days)

value: forebrain

value: Forebrain from 24 embyonic 14.5 day mice

value: embryonic

value: Len Pennacchio, LBNL

value: ENCBS002AAA at ENCODE; https://www.encodeproject.org/ENCBS002AAA/


title: ATAC-seq from forebrain (ENCLB312MJN)

description:
https://www.encodeproject.org/experiments/ENCSR810HQR/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e14.5 mouse forebrain
experiment encode accession: ENCSR810HQR
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB312MJN
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: Forebrain from 34 embryonic 14.5 day mice

value: ENCBS014AAA at ENCODE; https://www.encodeproject.org/ENCBS014AAA/


title: ATAC-seq from hindbrain (ENCLB625SZP)

description:
https://www.encodeproject.org/experiments/ENCSR312LQX/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on postnatal p0 mouse hindbrain
experiment encode accession: ENCSR312LQX
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB625SZP
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: Hindbrain from 15 postnatal 0 day mice

value: 0 day

value: postnatal

value: ENCBS040AAA at ENCODE; https://www.encodeproject.org/ENCBS040AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ATAC-seq from intestine (ENCLB199HRA)

description:
https://www.encodeproject.org/experiments/ENCSR079GOY/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on postnatal p0 mouse intestine
experiment encode accession: ENCSR079GOY
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB199HRA
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NTac;B6NCrl/Lap intestine tissue mixed sex postnatal (0 days)

value: intestine

value: Intestine from pooled postnatal 0 day mice

value: pooled male and female

value: healthy

value: ENCBS560AAA at ENCODE; https://www.encodeproject.org/ENCBS560AAA/


title: ATAC-seq from lung (ENCLB517ADM)

description:
https://www.encodeproject.org/experiments/ENCSR335VJW/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e14.5 mouse lung
experiment encode accession: ENCSR335VJW
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB517ADM
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NTac;B6NCrl/Lap mixed sex embryo (14.5 days) lung tissue

value: lung

value: tissue

value: Lung from 17 embryonic 14.5 day mice

value: Len Pennacchio

value: ENCBS030AAA at ENCODE; https://www.encodeproject.org/ENCBS030AAA/


title: ATAC-seq from forebrain (ENCLB558DNK)

description:
https://www.encodeproject.org/experiments/ENCSR310MLB/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on postnatal p0 mouse forebrain
experiment encode accession: ENCSR310MLB
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB558DNK
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NTac;B6NCrl/Lap forebrain tissue mixed sex postnatal (0 days)

value: forebrain

value: Forebrain of pooled postnatal 0 day mice

value: Len Pennacchio, LBNL

value: ENCBS554AAA at ENCODE; https://www.encodeproject.org/ENCBS554AAA/


title: ATAC-seq from forebrain (ENCLB949MHR)

description:
https://www.encodeproject.org/experiments/ENCSR559FAJ/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e12.5 mouse forebrain
experiment encode accession: ENCSR559FAJ
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB949MHR
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl forebrain tissue mixed sex embryo (12.5 days)

value: Forebrain from 120 embryonic 12.5 day mice

value: embryonic

value: ENCBS974GPH at ENCODE; https://www.encodeproject.org/ENCBS974GPH/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ATAC-seq from liver (ENCLB090ADG)

description:
https://www.encodeproject.org/experiments/ENCSR302LIV/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e12.5 mouse liver
experiment encode accession: ENCSR302LIV
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB090ADG
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl liver tissue mixed sex embryo (12.5 days)

value: liver

value: Liver from 88 embryonic 12.5 day mice

value: ENCBS479VPX at ENCODE; https://www.encodeproject.org/ENCBS479VPX/


title: ATAC-seq from liver (ENCLB774WKA)

description:
https://www.encodeproject.org/experiments/ENCSR302LIV/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e12.5 mouse liver
experiment encode accession: ENCSR302LIV
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB774WKA
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: Liver from 120 embryonic 12.5 day mice

value: pooled male and female

value: healthy

value: ENCBS236ISK at ENCODE; https://www.encodeproject.org/ENCBS236ISK/


title: ATAC-seq from intestine (ENCLB362STB)

description:
https://www.encodeproject.org/experiments/ENCSR079GOY/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on postnatal p0 mouse intestine
experiment encode accession: ENCSR079GOY
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB362STB
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: intestine

value: tissue

value: Intestine from 15 postnatal 0 day mice

value: 0 day

value: postnatal

value: ENCBS044AAA at ENCODE; https://www.encodeproject.org/ENCBS044AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ATAC-seq from hindbrain (ENCLB513WMU)

description:
https://www.encodeproject.org/experiments/ENCSR798FDL/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e14.5 mouse hindbrain
experiment encode accession: ENCSR798FDL
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB513WMU
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NTac;B6NCrl/Lap hindbrain tissue mixed sex embryo (14.5 days)

value: hindbrain

value: Hindbrain from 34 embryonic 14.5 day mice

value: embryonic

value: Len Pennacchio, LBNL

value: ENCBS016AAA at ENCODE; https://www.encodeproject.org/ENCBS016AAA/


title: ATAC-seq from heart (ENCLB228STB)

description:
https://www.encodeproject.org/experiments/ENCSR068YGC/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e14.5 mouse heart
experiment encode accession: ENCSR068YGC
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB228STB
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NTac;B6NCrl/Lap heart tissue mixed sex embryo (14.5 days)

value: heart

value: Heart from pooled embryonic 14.5 day mice

value: ENCBS566AAA at ENCODE; https://www.encodeproject.org/ENCBS566AAA/


title: ATAC-seq from hindbrain (ENCLB248EUT)

description:
https://www.encodeproject.org/experiments/ENCSR798FDL/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e14.5 mouse hindbrain
experiment encode accession: ENCSR798FDL
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB248EUT
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NTac;B6NCrl/Lap mixed sex embryo (14.5 days) hindbrain tissue

value: Hindbrain from 17 embryonic 14.5 day mice

value: pooled male and female

value: Len Pennacchio

value: healthy

value: ENCBS028AAA at ENCODE; https://www.encodeproject.org/ENCBS028AAA/


title: ATAC-seq from forebrain (ENCLB124JXC)

description:
https://www.encodeproject.org/experiments/ENCSR559FAJ/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e12.5 mouse forebrain
experiment encode accession: ENCSR559FAJ
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB124JXC
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: forebrain

value: tissue

value: Forebrain from 68 embryonic 12.5 day mice

value: ENCBS617DPG at ENCODE; https://www.encodeproject.org/ENCBS617DPG/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ATAC-seq from heart (ENCLB623FXD)

description:
https://www.encodeproject.org/experiments/ENCSR068YGC/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e14.5 mouse heart
experiment encode accession: ENCSR068YGC
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB623FXD
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: ENCBS563AAA at ENCODE; https://www.encodeproject.org/ENCBS563AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ATAC-seq from heart (ENCLB049MVV)

description:
https://www.encodeproject.org/experiments/ENCSR552ABC/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e13.5 mouse heart
experiment encode accession: ENCSR552ABC
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB049MVV
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl heart tissue mixed sex embryo (13.5 days)

value: Heart from embryonic 13.5 day mice

value: embryonic

value: Len Pennacchio, LBNL

value: ENCBS814PLT at ENCODE; https://www.encodeproject.org/ENCBS814PLT/


title: ATAC-seq from liver (ENCLB555EYH)

description:
https://www.encodeproject.org/experiments/ENCSR032HKE/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e14.5 mouse liver
experiment encode accession: ENCSR032HKE
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB555EYH
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NTac;B6NCrl/Lap mixed sex embryo (14.5 days) liver tissue

value: liver

value: Liver from 34 embryonic 14.5 day mice

value: ENCBS019AAA at ENCODE; https://www.encodeproject.org/ENCBS019AAA/


title: DNase-seq from liver (ENCLB584KUE)

description:
https://www.encodeproject.org/experiments/ENCSR789AYI/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR789AYI
assay title: DNase-seq
assembly: mm10
encode release date: 2020-10-07
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB584KUE
instrument models: Illumina HiSeq 4000,Illumina NextSeq 500

source_name: Mus musculus strain B6NCrl liver tissue

value: not collected

value: unknown

value: John Stamatoyannopoulos, UW

value: The Jackson Laboratory

value: ENCBS816AFT at ENCODE; https://www.encodeproject.org/ENCBS816AFT/


title: DNase-seq from liver (ENCLB416NRM)

description:
https://www.encodeproject.org/experiments/ENCSR789AYI/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR789AYI
assay title: DNase-seq
assembly: mm10
encode release date: 2020-10-07
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB416NRM
instrument models: Illumina HiSeq 4000,Illumina NextSeq 500

value: tissue

value: ENCBS997SIM at ENCODE; https://www.encodeproject.org/ENCBS997SIM/


title: ATAC-seq from heart (ENCLB520EXZ)

description:
https://www.encodeproject.org/experiments/ENCSR552ABC/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e13.5 mouse heart
experiment encode accession: ENCSR552ABC
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB520EXZ
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: heart

value: pooled male and female

value: healthy

value: ENCBS490ZWZ at ENCODE; https://www.encodeproject.org/ENCBS490ZWZ/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ATAC-seq from liver (ENCLB200ODB)

description:
https://www.encodeproject.org/experiments/ENCSR032HKE/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e14.5 mouse liver
experiment encode accession: ENCSR032HKE
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB200ODB
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: Liver from 24 embryonic 14.5 day mice

value: embryonic

value: Len Pennacchio, LBNL

value: Len Pennacchio

value: ENCBS007AAA at ENCODE; https://www.encodeproject.org/ENCBS007AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ATAC-seq from forebrain (ENCLB042MOW)

description:
https://www.encodeproject.org/experiments/ENCSR310MLB/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on postnatal p0 mouse forebrain
experiment encode accession: ENCSR310MLB
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB042MOW
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: forebrain

value: Forebrain from 15 postnatal 0 day mice

value: 0 day

value: postnatal

value: ENCBS038AAA at ENCODE; https://www.encodeproject.org/ENCBS038AAA/


title: ATAC-seq from embryonic facial prominence (ENCLB105QYB)

description:
https://www.encodeproject.org/experiments/ENCSR031HDN/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e12.5 mouse embryonic facial prominence
experiment encode accession: ENCSR031HDN
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB105QYB
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl embryonic facial prominence tissue mixed sex embryo (12.5 days)

value: embryonic facial prominence

value: tissue

value: Embryonic facial prominence from 120 embryonic 12.5 day mice

value: ENCBS047UII at ENCODE; https://www.encodeproject.org/ENCBS047UII/


title: ATAC-seq from embryonic facial prominence (ENCLB434JPX)

description:
https://www.encodeproject.org/experiments/ENCSR031HDN/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e12.5 mouse embryonic facial prominence
experiment encode accession: ENCSR031HDN
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB434JPX
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: Embryonic facial prominence from 88 embryonic 12.5 day mice

value: pooled male and female

value: healthy

value: ENCBS399GYO at ENCODE; https://www.encodeproject.org/ENCBS399GYO/


title: ATAC-seq from limb (ENCLB085OJN)

description:
https://www.encodeproject.org/experiments/ENCSR551WBK/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e12.5 mouse limb
experiment encode accession: ENCSR551WBK
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-10-10
lab: Bing Ren, UCSD
library encode accession: ENCLB085OJN
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl limb tissue mixed sex embryo (12.5 days)

value: limb

value: Limb from 68 embryonic 12.5 day mice

value: embryonic

value: Len Pennacchio, LBNL

value: ENCBS313XRY at ENCODE; https://www.encodeproject.org/ENCBS313XRY/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ATAC-seq from liver (ENCLB479OGV)

description:
https://www.encodeproject.org/experiments/ENCSR785NEL/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e11.5 mouse liver
experiment encode accession: ENCSR785NEL
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB479OGV
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl liver tissue mixed sex embryo (11.5 days)

value: liver

value: Liver from pooled embryonic 11.5 day mice

value: ENCBS522YOW at ENCODE; https://www.encodeproject.org/ENCBS522YOW/


title: ATAC-seq from liver (ENCLB441LCB)

description:
https://www.encodeproject.org/experiments/ENCSR785NEL/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e11.5 mouse liver
experiment encode accession: ENCSR785NEL
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB441LCB
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl mixed sex embryo (11.5 days) liver tissue

value: Liver from 162 embyronic 11.5 day mice

value: Len Pennacchio

value: ENCBS598QTR at ENCODE; https://www.encodeproject.org/ENCBS598QTR/


title: DNase-seq from hindbrain (ENCLB013NXT)

description:
https://www.encodeproject.org/experiments/ENCSR289BTM/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR289BTM
assay title: DNase-seq
assembly: mm10
encode release date: 2017-09-26
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB013NXT

source_name: Mus musculus strain B6NCrl mixed sex embryo (10.5 days) hindbrain tissue

value: hindbrain

value: tissue

value: John Stamatoyannopoulos, UW

value: Mark Groudine

value: ENCBS984TAB at ENCODE; https://www.encodeproject.org/ENCBS984TAB/


title: ATAC-seq from kidney (ENCLB874ZPR)

description:
https://www.encodeproject.org/experiments/ENCSR023QZX/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on embryonic e15.5 mouse kidney
experiment encode accession: ENCSR023QZX
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB874ZPR
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

source_name: Mus musculus strain B6NCrl kidney tissue mixed sex embryo (15.5 days)

value: kidney

value: Kidney from 78 embryonic 15.5 day mice

value: pooled male and female

value: healthy

value: ENCBS899UOK at ENCODE; https://www.encodeproject.org/ENCBS899UOK/


title: DNase-seq from hindbrain (ENCLB475GJF)

description:
https://www.encodeproject.org/experiments/ENCSR289BTM/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR289BTM
assay title: DNase-seq
assembly: mm10
encode release date: 2017-09-26
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB475GJF

value: embryonic

value: ENCBS799HWB at ENCODE; https://www.encodeproject.org/ENCBS799HWB/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ATAC-seq from kidney (ENCLB024QLK)

description:
https://www.encodeproject.org/experiments/ENCSR023QZX/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on embryonic e15.5 mouse kidney
experiment encode accession: ENCSR023QZX
assay title: ATAC-seq
assembly: mm10
encode release date: 2017-05-10
lab: Bing Ren, UCSD
library encode accession: ENCLB024QLK
fragmentation methods: chemical (Nextera tagmentation)
size range: 200-750

value: Kidney from 62 embryonic 15.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS924ZKF at ENCODE; https://www.encodeproject.org/ENCBS924ZKF/