title: TF ChIP-seq from HepG2 (ENCLB927JLM)

description:
https://www.encodeproject.org/experiments/ENCSR957FIZ/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR957FIZ
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR730QNM
encode release date: 2020-08-17
lab: Richard Myers, HAIB
library encode accession: ENCLB927JLM
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting UBTF

value: UBTF

value: ENCBS829GSF at ENCODE; https://www.encodeproject.org/ENCBS829GSF/


title: ATAC-seq from HCT116 (ENCLB310CQI)

status: Public on Mar 30 2021

type: SRA

city: Stanford

first: ENCODE

last: DCC

state: CA

address: 300 Pasteur Dr

country: USA

institute: ENCODE DCC

description:
https://www.encodeproject.org/experiments/ENCSR872WGW/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR872WGW
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2020-10-08
lab: Michael Snyder, Stanford
library encode accession: ENCLB310CQI
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

library_source: genomic

data_processing: See GSM*_README.txt supplementary file linked below

molecule: genomic DNA

organism: Homo sapiens

source_name: Homo sapiens HCT116 cell line

tag: line

value: cell line

tag: biosample encode accession

tag: Sex

value: male

tag: health state

value: colorectal carcinoma

tag: dev stage

value: adult

tag: age

value: 48 year

tag: lab

value: Mats Ljungman, UMichigan

tag: source

value: ATCC

tag: link

value: ENCBS162XQL at ENCODE; https://www.encodeproject.org/ENCBS162XQL/

value: Derived from ENCODE donor ENCDO000ABE; https://www.encodeproject.org/ENCDO000ABE/


title: TF ChIP-seq from HepG2 (ENCLB889UIA)

description:
https://www.encodeproject.org/experiments/ENCSR964ZJC/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR964ZJC
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR019ZGX
encode release date: 2020-08-28
lab: Richard Myers, HAIB
library encode accession: ENCLB889UIA
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZNF547

tag: antibody

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS451ZRL at ENCODE; https://www.encodeproject.org/ENCBS451ZRL/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: TF ChIP-seq from HepG2 (ENCLB495OMH)

description:
https://www.encodeproject.org/experiments/ENCSR957FIZ/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR957FIZ
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR730QNM
encode release date: 2020-08-17
lab: Richard Myers, HAIB
library encode accession: ENCLB495OMH
fragmentation methods: sonication (generic)

value: UBTF

value: ENCBS489DPK at ENCODE; https://www.encodeproject.org/ENCBS489DPK/


title: DNase-seq from posterior cingulate gyrus (ENCLB594RLT)

description:
https://www.encodeproject.org/experiments/ENCSR510GRY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR510GRY
assay title: DNase-seq
assembly: GRCh38
encode release date: 2021-01-12
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB594RLT

source_name: Homo sapiens male adult (83 years) posterior cingulate gyrus tissue

value: posterior cingulate gyrus

value: tissue

value: male

value: 83 year

value: John Stamatoyannopoulos, UW

value: Rush University

value: ENCBS338VSK at ENCODE; https://www.encodeproject.org/ENCBS338VSK/

value: Derived from ENCODE donor ENCDO592ZWW; https://www.encodeproject.org/ENCDO592ZWW/


title: DNase-seq from ovary (ENCLB870GLO)

description:
https://www.encodeproject.org/experiments/ENCSR872DUY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR872DUY
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-09-28
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB870GLO

source_name: Homo sapiens female adult (41 years) ovary tissue, preserved by flash-freezing

value: ovary

value: female

value: DM:no; HTN:no; CAD:no

value: adult

value: 41 year

value: Michael Snyder, Stanford

value: Yiing Lin, MD, PhD

value: ENCBS494JWP at ENCODE; https://www.encodeproject.org/ENCBS494JWP/

value: Derived from ENCODE donor ENCDO575WHY; https://www.encodeproject.org/ENCDO575WHY/


title: TF ChIP-seq from HepG2 (ENCLB198JMZ)

description:
https://www.encodeproject.org/experiments/ENCSR396XDF/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR396XDF
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR042HRU
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB198JMZ
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZBTB24

value: cell line

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS826MGK at ENCODE; https://www.encodeproject.org/ENCBS826MGK/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: TF ChIP-seq from HepG2 (ENCLB501UUV)

description:
https://www.encodeproject.org/experiments/ENCSR396XDF/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR396XDF
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR042HRU
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB501UUV
fragmentation methods: sonication (generic)

value: male

value: ENCBS331KCA at ENCODE; https://www.encodeproject.org/ENCBS331KCA/


title: DNase-seq from tibial nerve (ENCLB813NVH)

description:
https://www.encodeproject.org/experiments/ENCSR508FVM/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR508FVM
assay title: DNase-seq
assembly: GRCh38
encode release date: 2019-11-08
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB813NVH

source_name: Homo sapiens male adult (54 years) tibial nerve tissue

value: tibial nerve

value: tissue

value: 54 year

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS682OLO at ENCODE; https://www.encodeproject.org/ENCBS682OLO/

value: Derived from ENCODE donor ENCDO451RUA; https://www.encodeproject.org/ENCDO451RUA/


title: TF ChIP-seq from HepG2 (ENCLB558PRR)

description:
https://www.encodeproject.org/experiments/ENCSR574UJE/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR574UJE
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR555EMB
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB558PRR
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZNF485

value: cell line

value: ENCBS537LIA at ENCODE; https://www.encodeproject.org/ENCBS537LIA/


title: TF ChIP-seq from K562 (ENCLB652QEZ)

description:
https://www.encodeproject.org/experiments/ENCSR508EEX/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-ZNF397 ChIP-seq on human K562
experiment encode accession: ENCSR508EEX
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR328FYU, ENCSR335HNV
encode release date: 2020-08-03
lab: Michael Snyder, Stanford
library encode accession: ENCLB652QEZ
fragmentation methods: sonication (Bioruptor Pico)
size range: 250-450

source_name: Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting ZNF397

value: female

value: chronic myelogenous leukemia (CML)

value: adult

value: 53 year

value: Michael Snyder, Stanford

value: Kevin White

value: ENCBS978NLP at ENCODE; https://www.encodeproject.org/ENCBS978NLP/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: TF ChIP-seq from K562 (ENCLB339VBU)

description:
https://www.encodeproject.org/experiments/ENCSR508EEX/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-ZNF397 ChIP-seq on human K562
experiment encode accession: ENCSR508EEX
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR328FYU, ENCSR335HNV
encode release date: 2020-08-03
lab: Michael Snyder, Stanford
library encode accession: ENCLB339VBU
fragmentation methods: sonication (Bioruptor Pico)
size range: 250-450

value: ENCBS339WLH at ENCODE; https://www.encodeproject.org/ENCBS339WLH/


title: TF ChIP-seq from HepG2 (ENCLB459IJP)

description:
https://www.encodeproject.org/experiments/ENCSR574UJE/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR574UJE
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR555EMB
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB459IJP
fragmentation methods: sonication (generic)

value: male

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS907DZZ at ENCODE; https://www.encodeproject.org/ENCBS907DZZ/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: DNase-seq from spleen (ENCLB082FTN)

description:
https://www.encodeproject.org/experiments/ENCSR128GBN/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR128GBN
assay title: DNase-seq
assembly: GRCh38
encode release date: 2019-11-08
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB082FTN

source_name: Homo sapiens female adult (53 years) spleen tissue

value: spleen

value: tissue

value: female

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS009WOO at ENCODE; https://www.encodeproject.org/ENCBS009WOO/

value: Derived from ENCODE donor ENCDO793LXB; https://www.encodeproject.org/ENCDO793LXB/


title: TF ChIP-seq from HepG2 (ENCLB993ZLR)

description:
https://www.encodeproject.org/experiments/ENCSR387TUH/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR387TUH
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR776XHE
encode release date: 2020-08-28
lab: Richard Myers, HAIB
library encode accession: ENCLB993ZLR
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting EEA1

value: cell line

value: ENCBS678DBK at ENCODE; https://www.encodeproject.org/ENCBS678DBK/


title: TF ChIP-seq from K562 (ENCLB302NYQ)

description:
https://www.encodeproject.org/experiments/ENCSR126YJQ/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-HMG20A ChIP-seq on human K562
experiment encode accession: ENCSR126YJQ
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR193DQJ, ENCSR328FYU
encode release date: 2020-08-03
lab: Michael Snyder, Stanford
library encode accession: ENCLB302NYQ
size range: 450-650

source_name: Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting HMG20A

tag: description

value: K562 cell line stably expressing a C-terminal LAP-tag containing eGFP, fused to HMG20A.

value: chronic myelogenous leukemia (CML)

value: adult

value: 53 year

value: Michael Snyder, Stanford

value: Kevin White

value: ENCBS624NER at ENCODE; https://www.encodeproject.org/ENCBS624NER/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: TF ChIP-seq from K562 (ENCLB627NWL)

description:
https://www.encodeproject.org/experiments/ENCSR970OJY/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on K562
experiment encode accession: ENCSR970OJY
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR953NJZ
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB627NWL
fragmentation methods: sonication (generic)

source_name: Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting TCF3

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS269ONN at ENCODE; https://www.encodeproject.org/ENCBS269ONN/


title: TF ChIP-seq from HepG2 (ENCLB565AWL)

description:
https://www.encodeproject.org/experiments/ENCSR387TUH/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR387TUH
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR776XHE
encode release date: 2020-08-28
lab: Richard Myers, HAIB
library encode accession: ENCLB565AWL
fragmentation methods: sonication (generic)

value: male

value: hepatocellular carcinoma

value: child

value: 15 year

value: ENCBS546IZD at ENCODE; https://www.encodeproject.org/ENCBS546IZD/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: DNase-seq from T-helper 2 cell (ENCLB915XJL)

description:
https://www.encodeproject.org/experiments/ENCSR872IXQ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR872IXQ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-09-28
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB915XJL

source_name: Homo sapiens male adult (30 years) T-helper 2 primary cell

value: T-helper 2 cell

value: primary cell

value: 30 year

value: John Stamatoyannopoulos, UW

value: AllCells

value: ENCBS352HHF at ENCODE; https://www.encodeproject.org/ENCBS352HHF/

value: Derived from ENCODE donor ENCDO739OLY; https://www.encodeproject.org/ENCDO739OLY/


title: DNase-seq from ovary (ENCLB184QBO)

description:
https://www.encodeproject.org/experiments/ENCSR330ZBO/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR330ZBO
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-09-28
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB184QBO

source_name: Homo sapiens female adult (59 years) ovary tissue, preserved by flash-freezing

value: ovary

value: tissue

value: female

value: DM:yes; HTN:yes; CAD:no

value: adult

value: 59 year

value: Michael Snyder, Stanford

value: Yiing Lin, MD, PhD

value: ENCBS651EAK at ENCODE; https://www.encodeproject.org/ENCBS651EAK/

value: Derived from ENCODE donor ENCDO856ZOJ; https://www.encodeproject.org/ENCDO856ZOJ/


title: TF ChIP-seq from K562 (ENCLB607CMG)

description:
https://www.encodeproject.org/experiments/ENCSR870YEN/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-ZSCAN32 ChIP-seq on human K562
experiment encode accession: ENCSR870YEN
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR737ZKM, ENCSR328FYU
encode release date: 2020-08-03
lab: Michael Snyder, Stanford
library encode accession: ENCLB607CMG
size range: 450-650

source_name: Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting ZSCAN32

value: cell line

value: K562 cell line stably expressing a C-terminal LAP-tag containing eGFP, fused to ZSCAN32.

value: chronic myelogenous leukemia (CML)

value: 53 year

value: Kevin White

value: ENCBS712IYX at ENCODE; https://www.encodeproject.org/ENCBS712IYX/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: TF ChIP-seq from HepG2 (ENCLB072PFT)

description:
https://www.encodeproject.org/experiments/ENCSR946RZN/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR946RZN
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR621FPD
encode release date: 2020-08-28
lab: Richard Myers, HAIB
library encode accession: ENCLB072PFT
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting SP2

value: male

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS486AIQ at ENCODE; https://www.encodeproject.org/ENCBS486AIQ/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: TF ChIP-seq from HepG2 (ENCLB985HZN)

description:
https://www.encodeproject.org/experiments/ENCSR946PKH/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR946PKH
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR042HRU
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB985HZN
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZNF678

value: ENCBS176BFE at ENCODE; https://www.encodeproject.org/ENCBS176BFE/


title: TF ChIP-seq from HepG2 (ENCLB463SXS)

description:
https://www.encodeproject.org/experiments/ENCSR386UBO/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR386UBO
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR479INP
encode release date: 2020-06-30
lab: Richard Myers, HAIB
library encode accession: ENCLB463SXS
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ARID4A

value: ENCBS959XLT at ENCODE; https://www.encodeproject.org/ENCBS959XLT/


title: TF ChIP-seq from K562 (ENCLB307JGG)

description:
https://www.encodeproject.org/experiments/ENCSR126YJQ/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-HMG20A ChIP-seq on human K562
experiment encode accession: ENCSR126YJQ
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR193DQJ, ENCSR328FYU
encode release date: 2020-08-03
lab: Michael Snyder, Stanford
library encode accession: ENCLB307JGG
size range: 450-650

value: cell line

value: K562 cell line stably expressing a C-terminal LAP-tag containing eGFP, fused to HMG20A.

value: female

value: adult

value: Michael Snyder, Stanford

value: ENCBS942GSO at ENCODE; https://www.encodeproject.org/ENCBS942GSO/


title: TF ChIP-seq from HepG2 (ENCLB092CXY)

description:
https://www.encodeproject.org/experiments/ENCSR960ASR/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR960ASR
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR776XHE
encode release date: 2020-08-28
lab: Richard Myers, HAIB
library encode accession: ENCLB092CXY
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting TIGD6

value: ENCBS480MSA at ENCODE; https://www.encodeproject.org/ENCBS480MSA/


title: TF ChIP-seq from K562 (ENCLB444RYM)

description:
https://www.encodeproject.org/experiments/ENCSR870YEN/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-ZSCAN32 ChIP-seq on human K562
experiment encode accession: ENCSR870YEN
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR737ZKM, ENCSR328FYU
encode release date: 2020-08-03
lab: Michael Snyder, Stanford
library encode accession: ENCLB444RYM
size range: 450-650

value: K562 cell line stably expressing a C-terminal LAP-tag containing eGFP, fused to ZSCAN32.

value: chronic myelogenous leukemia (CML)

value: 53 year

value: Kevin White

value: ENCBS822ZIB at ENCODE; https://www.encodeproject.org/ENCBS822ZIB/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: TF ChIP-seq from HepG2 (ENCLB278PQJ)

description:
https://www.encodeproject.org/experiments/ENCSR946PKH/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR946PKH
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR042HRU
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB278PQJ
fragmentation methods: sonication (generic)

value: male

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS414LAJ at ENCODE; https://www.encodeproject.org/ENCBS414LAJ/


title: TF ChIP-seq from HepG2 (ENCLB210SOX)

description:
https://www.encodeproject.org/experiments/ENCSR946RZN/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR946RZN
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR621FPD
encode release date: 2020-08-28
lab: Richard Myers, HAIB
library encode accession: ENCLB210SOX
fragmentation methods: sonication (generic)

value: cell line

value: ENCBS707BZR at ENCODE; https://www.encodeproject.org/ENCBS707BZR/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: TF ChIP-seq from HepG2 (ENCLB592QSD)

description:
https://www.encodeproject.org/experiments/ENCSR198RHC/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR198RHC
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR042HRU
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB592QSD
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZNF782

value: ENCBS189RCG at ENCODE; https://www.encodeproject.org/ENCBS189RCG/


title: DNase-seq from T-cell (ENCLB199MPQ)

description:
https://www.encodeproject.org/experiments/ENCSR507XBY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR507XBY
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-10-02
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB199MPQ

source_name: Homo sapiens male adult (19 years) T-cell primary cell

value: T-cell

value: primary cell

value: adult

value: 19 year

value: John Stamatoyannopoulos, UW

value: AllCells

value: ENCBS593DWT at ENCODE; https://www.encodeproject.org/ENCBS593DWT/

value: Derived from ENCODE donor ENCDO654TNZ; https://www.encodeproject.org/ENCDO654TNZ/


title: DNase-seq from dorsolateral prefrontal cortex (ENCLB579WGE)

description:
https://www.encodeproject.org/experiments/ENCSR329FHR/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR329FHR
assay title: DNase-seq
assembly: GRCh38
encode release date: 2021-01-12
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB579WGE

source_name: Homo sapiens female adult (90 or above years) dorsolateral prefrontal cortex tissue with Cognitive impairment

value: dorsolateral prefrontal cortex

value: tissue

value: female

value: 90 year or above

value: Rush University

value: ENCBS186DYL at ENCODE; https://www.encodeproject.org/ENCBS186DYL/

value: Derived from ENCODE donor ENCDO448YMQ; https://www.encodeproject.org/ENCDO448YMQ/


title: TF ChIP-seq from HepG2 (ENCLB464UEG)

description:
https://www.encodeproject.org/experiments/ENCSR198RHC/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR198RHC
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR042HRU
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB464UEG
fragmentation methods: sonication (generic)

value: cell line

value: male

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS643BOJ at ENCODE; https://www.encodeproject.org/ENCBS643BOJ/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: TF ChIP-seq from HepG2 (ENCLB462NPG)

description:
https://www.encodeproject.org/experiments/ENCSR386UBO/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR386UBO
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR479INP
encode release date: 2020-06-30
lab: Richard Myers, HAIB
library encode accession: ENCLB462NPG
fragmentation methods: sonication (generic)

value: ENCBS837GUK at ENCODE; https://www.encodeproject.org/ENCBS837GUK/


title: TF ChIP-seq from HepG2 (ENCLB747APC)

description:
https://www.encodeproject.org/experiments/ENCSR198BHH/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR198BHH
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR730QNM
encode release date: 2020-08-17
lab: Richard Myers, HAIB
library encode accession: ENCLB747APC
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZNF550

value: ENCBS190EUE at ENCODE; https://www.encodeproject.org/ENCBS190EUE/


title: DNase-seq from CD4-positive, alpha-beta T cell (ENCLB652ALR)

description:
https://www.encodeproject.org/experiments/ENCSR126EVX/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR126EVX
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-10-05
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB652ALR

source_name: Homo sapiens female adult (33 years) CD4-positive, alpha-beta T primary cell

value: CD4-positive, alpha-beta T cell

value: primary cell

value: adult

value: 33 year

value: John Stamatoyannopoulos, UW

value: AllCells

value: ENCBS753GEO at ENCODE; https://www.encodeproject.org/ENCBS753GEO/

value: Derived from ENCODE donor ENCDO299FMV; https://www.encodeproject.org/ENCDO299FMV/


title: TF ChIP-seq from HepG2 (ENCLB250TGI)

description:
https://www.encodeproject.org/experiments/ENCSR945QEW/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR945QEW
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR770PLF
encode release date: 2020-07-01
lab: Richard Myers, HAIB
library encode accession: ENCLB250TGI
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZNF121

value: cell line

value: male

value: hepatocellular carcinoma

value: ENCBS301KWK at ENCODE; https://www.encodeproject.org/ENCBS301KWK/


title: TF ChIP-seq from HepG2 (ENCLB146ZOH)

description:
https://www.encodeproject.org/experiments/ENCSR198BHH/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR198BHH
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR730QNM
encode release date: 2020-08-17
lab: Richard Myers, HAIB
library encode accession: ENCLB146ZOH
fragmentation methods: sonication (generic)

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS029PBO at ENCODE; https://www.encodeproject.org/ENCBS029PBO/


title: DNase-seq from dorsolateral prefrontal cortex (ENCLB564AVB)

description:
https://www.encodeproject.org/experiments/ENCSR329FAP/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR329FAP
assay title: DNase-seq
assembly: GRCh38
encode release date: 2021-01-12
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB564AVB

source_name: Homo sapiens female adult (89 years) dorsolateral prefrontal cortex tissue with Alzheimer's disease

value: dorsolateral prefrontal cortex

value: tissue

value: female

value: 89 year

value: Rush University

value: ENCBS197KQM at ENCODE; https://www.encodeproject.org/ENCBS197KQM/

value: Derived from ENCODE donor ENCDO853VGZ; https://www.encodeproject.org/ENCDO853VGZ/


title: TF ChIP-seq from HepG2 (ENCLB865FNI)

description:
https://www.encodeproject.org/experiments/ENCSR945QEW/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR945QEW
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR770PLF
encode release date: 2020-07-01
lab: Richard Myers, HAIB
library encode accession: ENCLB865FNI
fragmentation methods: sonication (generic)

value: ENCBS345JNC at ENCODE; https://www.encodeproject.org/ENCBS345JNC/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: TF ChIP-seq from A549 (ENCLB899QAG)

description:
https://www.encodeproject.org/experiments/ENCSR326AQV/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-FOXS1 ChIP-seq on human A549
experiment encode accession: ENCSR326AQV
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR928HJI, ENCSR175NUT
encode release date: 2020-07-01
lab: Michael Snyder, Stanford
library encode accession: ENCLB899QAG
fragmentation methods: sonication (Bioruptor Pico)
size range: 250-450

source_name: Homo sapiens A549 cell line genetically modified (insertion) using CRISPR targeting FOXS1

value: cell line

value: male

value: adult

value: 58 year

value: Michael Snyder, Stanford

value: Michael Snyder

value: ENCBS361SKZ at ENCODE; https://www.encodeproject.org/ENCBS361SKZ/

value: Derived from ENCODE donor ENCDO000AAZ; https://www.encodeproject.org/ENCDO000AAZ/


title: TF ChIP-seq from K562 (ENCLB667RCR)

description:
https://www.encodeproject.org/experiments/ENCSR946BXO/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on K562
experiment encode accession: ENCSR946BXO
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR516XLO
encode release date: 2020-07-15
lab: Richard Myers, HAIB
library encode accession: ENCLB667RCR
fragmentation methods: sonication (generic)

source_name: Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting BRCA1

value: chronic myelogenous leukemia (CML)

value: 53 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS549CLF at ENCODE; https://www.encodeproject.org/ENCBS549CLF/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: TF ChIP-seq from HepG2 (ENCLB316PTJ)

description:
https://www.encodeproject.org/experiments/ENCSR940EZR/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR940EZR
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR555EMB
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB316PTJ
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZNF280B

value: hepatocellular carcinoma

value: child

value: 15 year

value: ENCBS254LUI at ENCODE; https://www.encodeproject.org/ENCBS254LUI/


title: TF ChIP-seq from A549 (ENCLB388XVE)

description:
https://www.encodeproject.org/experiments/ENCSR326AQV/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-FOXS1 ChIP-seq on human A549
experiment encode accession: ENCSR326AQV
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR928HJI, ENCSR175NUT
encode release date: 2020-07-01
lab: Michael Snyder, Stanford
library encode accession: ENCLB388XVE
fragmentation methods: sonication (Bioruptor Pico)
size range: 250-450

value: cell line

value: male

value: ENCBS677BKO at ENCODE; https://www.encodeproject.org/ENCBS677BKO/


title: TF ChIP-seq from HepG2 (ENCLB069GVG)

description:
https://www.encodeproject.org/experiments/ENCSR384SQB/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR384SQB
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR524BHN
encode release date: 2020-08-28
lab: Richard Myers, HAIB
library encode accession: ENCLB069GVG
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZNF25

value: ENCBS416VRT at ENCODE; https://www.encodeproject.org/ENCBS416VRT/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: DNase-seq from posterior cingulate gyrus (ENCLB272YNR)

description:
https://www.encodeproject.org/experiments/ENCSR330LFP/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR330LFP
assay title: DNase-seq
assembly: GRCh38
encode release date: 2021-01-11
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB272YNR

source_name: Homo sapiens female adult (82 years) posterior cingulate gyrus tissue

value: posterior cingulate gyrus

value: tissue

value: female

value: adult

value: 82 year

value: John Stamatoyannopoulos, UW

value: Rush University

value: ENCBS460EQS at ENCODE; https://www.encodeproject.org/ENCBS460EQS/

value: Derived from ENCODE donor ENCDO290OPS; https://www.encodeproject.org/ENCDO290OPS/


title: DNase-seq from placenta (ENCLB274XPV)

description:
https://www.encodeproject.org/experiments/ENCSR126EVK/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR126EVK
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-09-28
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB274XPV

source_name: Homo sapiens female embryo placenta tissue

value: placenta

value: embryonic

value: unknown

value: John Stamatoyannopoulos

value: ENCBS176GJM at ENCODE; https://www.encodeproject.org/ENCBS176GJM/

value: Derived from ENCODE donor ENCDO818SNP; https://www.encodeproject.org/ENCDO818SNP/


title: TF ChIP-seq from HepG2 (ENCLB160AGG)

description:
https://www.encodeproject.org/experiments/ENCSR940EZR/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR940EZR
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR555EMB
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB160AGG
fragmentation methods: sonication (generic)

value: cell line

value: male

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS452KWM at ENCODE; https://www.encodeproject.org/ENCBS452KWM/


title: TF ChIP-seq from HepG2 (ENCLB548MWT)

description:
https://www.encodeproject.org/experiments/ENCSR938VRO/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR938VRO
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR042HRU
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB548MWT
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZNF343

value: ENCBS628DWL at ENCODE; https://www.encodeproject.org/ENCBS628DWL/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: TF ChIP-seq from HepG2 (ENCLB760BOV)

description:
https://www.encodeproject.org/experiments/ENCSR384SQB/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR384SQB
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR524BHN
encode release date: 2020-08-28
lab: Richard Myers, HAIB
library encode accession: ENCLB760BOV
fragmentation methods: sonication (generic)

value: ENCBS031MEQ at ENCODE; https://www.encodeproject.org/ENCBS031MEQ/


title: TF ChIP-seq from K562 (ENCLB555NVQ)

description:
https://www.encodeproject.org/experiments/ENCSR946BXO/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on K562
experiment encode accession: ENCSR946BXO
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR516XLO
encode release date: 2020-07-15
lab: Richard Myers, HAIB
library encode accession: ENCLB555NVQ
fragmentation methods: sonication (generic)

value: female

value: chronic myelogenous leukemia (CML)

value: adult

value: 53 year

value: ENCBS546RGE at ENCODE; https://www.encodeproject.org/ENCBS546RGE/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: TF ChIP-seq from HepG2 (ENCLB050JCI)

description:
https://www.encodeproject.org/experiments/ENCSR196FSX/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR196FSX
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR356LLA
encode release date: 2020-08-28
lab: Richard Myers, HAIB
library encode accession: ENCLB050JCI
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZFP82

value: cell line

value: ENCBS883AUZ at ENCODE; https://www.encodeproject.org/ENCBS883AUZ/


title: DNase-seq from mucosa of descending colon (ENCLB320CCP)

description:
https://www.encodeproject.org/experiments/ENCSR507DQC/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR507DQC
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-09-28
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB320CCP

source_name: Homo sapiens male adult (26 years) mucosa of descending colon tissue, preserved by flash-freezing

value: mucosa of descending colon

value: tissue

value: male

value: DM:no; HTN:no; CAD:no

value: 26 year

value: Michael Snyder, Stanford

value: Yiing Lin, MD, PhD

value: ENCBS984PXC at ENCODE; https://www.encodeproject.org/ENCBS984PXC/

value: Derived from ENCODE donor ENCDO221IPH; https://www.encodeproject.org/ENCDO221IPH/


title: TF ChIP-seq from HepG2 (ENCLB426VZC)

description:
https://www.encodeproject.org/experiments/ENCSR559ZKI/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR559ZKI
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR042HRU
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB426VZC
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting NR2C2

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS158FDG at ENCODE; https://www.encodeproject.org/ENCBS158FDG/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: TF ChIP-seq from HepG2 (ENCLB933MPH)

description:
https://www.encodeproject.org/experiments/ENCSR938VRO/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR938VRO
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR042HRU
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB933MPH
fragmentation methods: sonication (generic)

value: cell line

value: ENCBS203QNT at ENCODE; https://www.encodeproject.org/ENCBS203QNT/


title: TF ChIP-seq from HepG2 (ENCLB339HYL)

description:
https://www.encodeproject.org/experiments/ENCSR931ZOM/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR931ZOM
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR388OQM
encode release date: 2020-06-30
lab: Richard Myers, HAIB
library encode accession: ENCLB339HYL
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZNF451

value: ENCBS468GFV at ENCODE; https://www.encodeproject.org/ENCBS468GFV/


title: DNase-seq from SJCRH30 (ENCLB749MBN)

description:
https://www.encodeproject.org/experiments/ENCSR506QJJ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR506QJJ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-10-06
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB749MBN

source_name: Homo sapiens SJCRH30 cell line

value: male

value: 17 year

value: John Stamatoyannopoulos, UW

value: ATCC

value: ENCBS158TNK at ENCODE; https://www.encodeproject.org/ENCBS158TNK/

value: Derived from ENCODE donor ENCDO339AAA; https://www.encodeproject.org/ENCDO339AAA/


title: TF ChIP-seq from HepG2 (ENCLB153BGC)

description:
https://www.encodeproject.org/experiments/ENCSR196FSX/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR196FSX
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR356LLA
encode release date: 2020-08-28
lab: Richard Myers, HAIB
library encode accession: ENCLB153BGC
fragmentation methods: sonication (generic)

value: ENCBS018UXA at ENCODE; https://www.encodeproject.org/ENCBS018UXA/


title: TF ChIP-seq from HepG2 (ENCLB673KOS)

description:
https://www.encodeproject.org/experiments/ENCSR193ADW/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR193ADW
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR621FPD
encode release date: 2020-08-28
lab: Richard Myers, HAIB
library encode accession: ENCLB673KOS
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting SETDB1

value: hepatocellular carcinoma

value: ENCBS752FGN at ENCODE; https://www.encodeproject.org/ENCBS752FGN/


title: DNase-seq from SJCRH30 (ENCLB179YFT)

description:
https://www.encodeproject.org/experiments/ENCSR506QJJ/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR506QJJ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-10-06
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB179YFT

value: child

value: ENCBS598ERL at ENCODE; https://www.encodeproject.org/ENCBS598ERL/


title: DNase-seq from dorsolateral prefrontal cortex (ENCLB879HUT)

description:
https://www.encodeproject.org/experiments/ENCSR124IMM/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR124IMM
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-09-28
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB879HUT

source_name: Homo sapiens female adult (90 or above years) dorsolateral prefrontal cortex tissue with Alzheimer's disease

value: dorsolateral prefrontal cortex

value: tissue

value: female

value: adult

value: 90 year or above

value: Rush University

value: ENCBS369QBX at ENCODE; https://www.encodeproject.org/ENCBS369QBX/

value: Derived from ENCODE donor ENCDO201EUI; https://www.encodeproject.org/ENCDO201EUI/


title: DNase-seq from adrenal gland (ENCLB753MCU)

description:
https://www.encodeproject.org/experiments/ENCSR325FWM/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR325FWM
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-09-28
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB753MCU

source_name: Homo sapiens female adult (41 years) adrenal gland tissue, preserved by flash-freezing

value: adrenal gland

value: DM:no; HTN:no; CAD:no

value: 41 year

value: Michael Snyder, Stanford

value: Yiing Lin, MD, PhD

value: ENCBS049DTW at ENCODE; https://www.encodeproject.org/ENCBS049DTW/

value: Derived from ENCODE donor ENCDO575WHY; https://www.encodeproject.org/ENCDO575WHY/


title: TF ChIP-seq from HepG2 (ENCLB905WSQ)

description:
https://www.encodeproject.org/experiments/ENCSR931SYA/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR931SYA
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR042HRU
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB905WSQ
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZBTB46

value: cell line

value: male

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS371CTQ at ENCODE; https://www.encodeproject.org/ENCBS371CTQ/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: TF ChIP-seq from HepG2 (ENCLB244KIR)

description:
https://www.encodeproject.org/experiments/ENCSR559ZKI/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR559ZKI
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR042HRU
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB244KIR
fragmentation methods: sonication (generic)

value: ENCBS885BXB at ENCODE; https://www.encodeproject.org/ENCBS885BXB/


title: DNase-seq from T-helper 2 cell (ENCLB289ALZ)

description:
https://www.encodeproject.org/experiments/ENCSR869JYO/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR869JYO
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-09-28
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB289ALZ

source_name: Homo sapiens male adult (42 years) T-helper 2 primary cell

value: T-helper 2 cell

value: primary cell

value: adult

value: 42 year

value: John Stamatoyannopoulos, UW

value: AllCells

value: ENCBS607RLC at ENCODE; https://www.encodeproject.org/ENCBS607RLC/

value: Derived from ENCODE donor ENCDO833KUM; https://www.encodeproject.org/ENCDO833KUM/


title: TF ChIP-seq from HepG2 (ENCLB273BGJ)

description:
https://www.encodeproject.org/experiments/ENCSR931ZOM/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR931ZOM
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR388OQM
encode release date: 2020-06-30
lab: Richard Myers, HAIB
library encode accession: ENCLB273BGJ
fragmentation methods: sonication (generic)

value: cell line

value: male

value: ENCBS286HMX at ENCODE; https://www.encodeproject.org/ENCBS286HMX/


title: TF ChIP-seq from HepG2 (ENCLB496VMR)

description:
https://www.encodeproject.org/experiments/ENCSR931SYA/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR931SYA
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR042HRU
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB496VMR
fragmentation methods: sonication (generic)

value: hepatocellular carcinoma

value: child

value: 15 year

value: ENCBS926BCH at ENCODE; https://www.encodeproject.org/ENCBS926BCH/


title: DNase-seq from posterior vena cava (ENCLB798JND)

description:
https://www.encodeproject.org/experiments/ENCSR324NVG/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR324NVG
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-09-28
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB798JND

source_name: Homo sapiens female adult (47 years) posterior vena cava tissue, preserved by flash-freezing

value: posterior vena cava

value: tissue

value: female

value: DM:yes; HTN:yes; CAD:no

value: 47 year

value: Michael Snyder, Stanford

value: Yiing Lin, MD, PhD

value: ENCBS210XKF at ENCODE; https://www.encodeproject.org/ENCBS210XKF/

value: Derived from ENCODE donor ENCDO528BHB; https://www.encodeproject.org/ENCDO528BHB/


title: TF ChIP-seq from HepG2 (ENCLB499TTO)

description:
https://www.encodeproject.org/experiments/ENCSR188EMJ/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR188EMJ
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR693GOR
encode release date: 2020-07-14
lab: Richard Myers, HAIB
library encode accession: ENCLB499TTO
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting SNAI1

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS621UAL at ENCODE; https://www.encodeproject.org/ENCBS621UAL/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: TF ChIP-seq from HepG2 (ENCLB750NXR)

description:
https://www.encodeproject.org/experiments/ENCSR188EMJ/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR188EMJ
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR693GOR
encode release date: 2020-07-14
lab: Richard Myers, HAIB
library encode accession: ENCLB750NXR
fragmentation methods: sonication (generic)

value: cell line

value: male

value: hepatocellular carcinoma

value: ENCBS136AGX at ENCODE; https://www.encodeproject.org/ENCBS136AGX/


title: DNase-seq from head of caudate nucleus (ENCLB163KLZ)

description:
https://www.encodeproject.org/experiments/ENCSR122NRV/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR122NRV
assay title: DNase-seq
assembly: GRCh38
encode release date: 2021-01-12
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB163KLZ

source_name: Homo sapiens female adult (78 years) head of caudate nucleus tissue

value: head of caudate nucleus

value: adult

value: 78 year

value: John Stamatoyannopoulos, UW

value: Rush University

value: ENCBS082XZQ at ENCODE; https://www.encodeproject.org/ENCBS082XZQ/

value: Derived from ENCODE donor ENCDO236YSH; https://www.encodeproject.org/ENCDO236YSH/


title: TF ChIP-seq from HepG2 (ENCLB601BZC)

description:
https://www.encodeproject.org/experiments/ENCSR193ADW/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR193ADW
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR621FPD
encode release date: 2020-08-28
lab: Richard Myers, HAIB
library encode accession: ENCLB601BZC
fragmentation methods: sonication (generic)

value: child

value: 15 year

value: ENCBS481NVV at ENCODE; https://www.encodeproject.org/ENCBS481NVV/


title: TF ChIP-seq from HepG2 (ENCLB600AXD)

description:
https://www.encodeproject.org/experiments/ENCSR374MAS/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR374MAS
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR524BHN
encode release date: 2020-08-28
lab: Richard Myers, HAIB
library encode accession: ENCLB600AXD
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting PITX1

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS881QAJ at ENCODE; https://www.encodeproject.org/ENCBS881QAJ/


title: TF ChIP-seq from HepG2 (ENCLB660XSV)

description:
https://www.encodeproject.org/experiments/ENCSR185AYQ/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR185AYQ
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ, ENCSR693GOR
encode release date: 2021-01-29
lab: Richard Myers, HAIB
library encode accession: ENCLB660XSV
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting DR1

value: cell line

value: ENCBS717XAE at ENCODE; https://www.encodeproject.org/ENCBS717XAE/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: TF ChIP-seq from HepG2 (ENCLB430IDF)

description:
https://www.encodeproject.org/experiments/ENCSR374MAS/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR374MAS
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR524BHN
encode release date: 2020-08-28
lab: Richard Myers, HAIB
library encode accession: ENCLB430IDF
fragmentation methods: sonication (generic)

value: male

value: hepatocellular carcinoma

value: ENCBS026QSX at ENCODE; https://www.encodeproject.org/ENCBS026QSX/


title: TF ChIP-seq from K562 (ENCLB668VSQ)

description:
https://www.encodeproject.org/experiments/ENCSR121SPB/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-KLF10 ChIP-seq on human K562
experiment encode accession: ENCSR121SPB
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR012KTG, ENCSR032KPU
encode release date: 2021-01-06
lab: Michael Snyder, Stanford
library encode accession: ENCLB668VSQ
fragmentation methods: sonication (Bioruptor Pico)
size range: 250-450

source_name: Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting KLF10

value: female

value: chronic myelogenous leukemia (CML)

value: adult

value: 53 year

value: Michael Snyder, Stanford

value: ATCC

value: ENCBS953CJW at ENCODE; https://www.encodeproject.org/ENCBS953CJW/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: TF ChIP-seq from HepG2 (ENCLB899QZS)

description:
https://www.encodeproject.org/experiments/ENCSR923MOO/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR923MOO
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR524BHN
encode release date: 2020-08-28
lab: Richard Myers, HAIB
library encode accession: ENCLB899QZS
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting MEF2D

value: child

value: 15 year

value: Richard Myers, HAIB

value: ENCBS758QLL at ENCODE; https://www.encodeproject.org/ENCBS758QLL/


title: TF ChIP-seq from HepG2 (ENCLB036AQU)

description:
https://www.encodeproject.org/experiments/ENCSR923MOO/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR923MOO
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR524BHN
encode release date: 2020-08-28
lab: Richard Myers, HAIB
library encode accession: ENCLB036AQU
fragmentation methods: sonication (generic)

value: cell line

value: Richard Myers

value: ENCBS477ZBK at ENCODE; https://www.encodeproject.org/ENCBS477ZBK/


title: DNase-seq from testis (ENCLB998JLV)

description:
https://www.encodeproject.org/experiments/ENCSR866ODX/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR866ODX
assay title: DNase-seq
assembly: GRCh38
encode release date: 2019-11-08
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB998JLV

source_name: Homo sapiens male adult (37 years) testis tissue

value: testis

value: tissue

value: male

value: 37 year

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS667KQG at ENCODE; https://www.encodeproject.org/ENCBS667KQG/

value: Derived from ENCODE donor ENCDO845WKR; https://www.encodeproject.org/ENCDO845WKR/


title: DNase-seq from upper lobe of left lung (ENCLB566OIN)

description:
https://www.encodeproject.org/experiments/ENCSR323UTX/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR323UTX
assay title: DNase-seq
assembly: GRCh38
encode release date: 2019-11-08
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB566OIN

source_name: Homo sapiens female adult (51 years) upper lobe of left lung tissue

value: upper lobe of left lung

value: female

value: adult

value: 51 year

value: ENCBS105BAT at ENCODE; https://www.encodeproject.org/ENCBS105BAT/

value: Derived from ENCODE donor ENCDO271OUW; https://www.encodeproject.org/ENCDO271OUW/


title: TF ChIP-seq from HepG2 (ENCLB334VMU)

description:
https://www.encodeproject.org/experiments/ENCSR922MQU/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR922MQU
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR019ZGX
encode release date: 2020-08-28
lab: Richard Myers, HAIB
library encode accession: ENCLB334VMU
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting FUBP1

value: cell line

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: ENCBS074CRM at ENCODE; https://www.encodeproject.org/ENCBS074CRM/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: TF ChIP-seq from HepG2 (ENCLB593BPJ)

description:
https://www.encodeproject.org/experiments/ENCSR365YCX/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR365YCX
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR770PLF
encode release date: 2020-07-01
lab: Richard Myers, HAIB
library encode accession: ENCLB593BPJ
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting RNF219

value: male

value: Richard Myers

value: ENCBS010BLS at ENCODE; https://www.encodeproject.org/ENCBS010BLS/


title: TF ChIP-seq from HepG2 (ENCLB519RCG)

description:
https://www.encodeproject.org/experiments/ENCSR365YCX/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR365YCX
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR770PLF
encode release date: 2020-07-01
lab: Richard Myers, HAIB
library encode accession: ENCLB519RCG
fragmentation methods: sonication (generic)

value: ENCBS924DEZ at ENCODE; https://www.encodeproject.org/ENCBS924DEZ/


title: TF ChIP-seq from K562 (ENCLB792AED)

description:
https://www.encodeproject.org/experiments/ENCSR121SPB/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-KLF10 ChIP-seq on human K562
experiment encode accession: ENCSR121SPB
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR012KTG, ENCSR032KPU
encode release date: 2021-01-06
lab: Michael Snyder, Stanford
library encode accession: ENCLB792AED
fragmentation methods: sonication (Bioruptor Pico)
size range: 250-450

value: chronic myelogenous leukemia (CML)

value: 53 year

value: Michael Snyder, Stanford

value: ATCC

value: ENCBS702DTC at ENCODE; https://www.encodeproject.org/ENCBS702DTC/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: DNase-seq from nephron progenitor cell (ENCLB438VIZ)

description:
https://www.encodeproject.org/experiments/ENCSR503UNA/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR503UNA
assay title: DNase-seq
assembly: GRCh38
encode release date: 2021-02-27
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB438VIZ

source_name: Homo sapiens female embryo (5 days) nephron progenitor in vitro differentiated cells originated from nephron progenitor cell, preserved by cryopreservation

value: nephron progenitor cell

value: in vitro differentiated cells

value: H9 derived nephron progenitor cell day 8

value: female

value: healthy

value: embryonic

value: 5 day

value: Bradley Bernstein, Broad

value: Joseph Bonventre

value: ENCBS126KCT at ENCODE; https://www.encodeproject.org/ENCBS126KCT/

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: TF ChIP-seq from HepG2 (ENCLB301DDW)

description:
https://www.encodeproject.org/experiments/ENCSR173NAL/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR173NAL
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR019ZGX
encode release date: 2020-08-28
lab: Richard Myers, HAIB
library encode accession: ENCLB301DDW
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZNF598

value: cell line

value: male

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS390YUU at ENCODE; https://www.encodeproject.org/ENCBS390YUU/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: DNase-seq from nephron progenitor cell (ENCLB144HCV)

description:
https://www.encodeproject.org/experiments/ENCSR503UNA/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR503UNA
assay title: DNase-seq
assembly: GRCh38
encode release date: 2021-02-27
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB144HCV

value: nephron progenitor cell

value: in vitro differentiated cells

value: H9 derived nephron progenitor cell day 8

value: female

value: ENCBS082ZAA at ENCODE; https://www.encodeproject.org/ENCBS082ZAA/


title: TF ChIP-seq from HepG2 (ENCLB316ZQW)

description:
https://www.encodeproject.org/experiments/ENCSR922MQU/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR922MQU
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR019ZGX
encode release date: 2020-08-28
lab: Richard Myers, HAIB
library encode accession: ENCLB316ZQW
fragmentation methods: sonication (generic)

value: ENCBS623LHX at ENCODE; https://www.encodeproject.org/ENCBS623LHX/


title: DNase-seq from posterior cingulate gyrus (ENCLB179LVP)

description:
https://www.encodeproject.org/experiments/ENCSR503UFM/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR503UFM
assay title: DNase-seq
assembly: GRCh38
encode release date: 2021-01-12
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB179LVP

source_name: Homo sapiens female adult (77 years) posterior cingulate gyrus tissue

value: posterior cingulate gyrus

value: tissue

value: adult

value: 77 year

value: John Stamatoyannopoulos, UW

value: Rush University

value: ENCBS222SFZ at ENCODE; https://www.encodeproject.org/ENCBS222SFZ/

value: Derived from ENCODE donor ENCDO628ASW; https://www.encodeproject.org/ENCDO628ASW/


title: ATAC-seq from mesenteric fat pad (ENCLB032NCZ)

description:
https://www.encodeproject.org/experiments/ENCSR551CSY/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human mesenteric fat pad
experiment encode accession: ENCSR551CSY
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2020-08-17
lab: Michael Snyder, Stanford
library encode accession: ENCLB032NCZ
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens male adult (26 years) mesenteric fat pad tissue, preserved by flash-freezing

value: mesenteric fat pad

value: male

value: DM:no; HTN:no; CAD:no

value: 26 year

value: Michael Snyder, Stanford

value: Yiing Lin, MD, PhD

value: ENCBS490WHP at ENCODE; https://www.encodeproject.org/ENCBS490WHP/

value: Derived from ENCODE donor ENCDO221IPH; https://www.encodeproject.org/ENCDO221IPH/


title: TF ChIP-seq from HepG2 (ENCLB735LLF)

description:
https://www.encodeproject.org/experiments/ENCSR171BKT/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR171BKT
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR690IYP
encode release date: 2020-07-01
lab: Richard Myers, HAIB
library encode accession: ENCLB735LLF
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZNF674

value: cell line

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS024SCN at ENCODE; https://www.encodeproject.org/ENCBS024SCN/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: TF ChIP-seq from HepG2 (ENCLB837PUZ)

description:
https://www.encodeproject.org/experiments/ENCSR171BKT/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR171BKT
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR690IYP
encode release date: 2020-07-01
lab: Richard Myers, HAIB
library encode accession: ENCLB837PUZ
fragmentation methods: sonication (generic)

value: ENCBS000SZJ at ENCODE; https://www.encodeproject.org/ENCBS000SZJ/


title: TF ChIP-seq from HepG2 (ENCLB399ANH)

description:
https://www.encodeproject.org/experiments/ENCSR173NAL/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR173NAL
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR019ZGX
encode release date: 2020-08-28
lab: Richard Myers, HAIB
library encode accession: ENCLB399ANH
fragmentation methods: sonication (generic)

value: ENCBS967HUC at ENCODE; https://www.encodeproject.org/ENCBS967HUC/


title: ATAC-seq from mesenteric fat pad (ENCLB102OSL)

description:
https://www.encodeproject.org/experiments/ENCSR551CSY/
***************
biological replicate number: 2
technical replicate number: 1
description: ATAC-seq on human mesenteric fat pad
experiment encode accession: ENCSR551CSY
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2020-08-17
lab: Michael Snyder, Stanford
library encode accession: ENCLB102OSL
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens male adult (26 years) mesenteric fat pad tissue, preserved by cryopreservation

value: mesenteric fat pad

value: tissue

value: male

value: adult

value: ENCBS374UDI at ENCODE; https://www.encodeproject.org/ENCBS374UDI/


title: TF ChIP-seq from HepG2 (ENCLB411IAV)

description:
https://www.encodeproject.org/experiments/ENCSR914HPP/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR914HPP
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR019ZGX
encode release date: 2020-08-28
lab: Richard Myers, HAIB
library encode accession: ENCLB411IAV
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZNF44

value: ENCBS406LQK at ENCODE; https://www.encodeproject.org/ENCBS406LQK/


title: DNase-seq from placenta (ENCLB002SCW)

description:
https://www.encodeproject.org/experiments/ENCSR503RWO/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR503RWO
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-09-28
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB002SCW

source_name: Homo sapiens male embryo placenta tissue

value: placenta

value: embryonic

value: unknown

value: John Stamatoyannopoulos, UW

value: John Stamatoyannopoulos

value: ENCBS600FNM at ENCODE; https://www.encodeproject.org/ENCBS600FNM/

value: Derived from ENCODE donor ENCDO023YQQ; https://www.encodeproject.org/ENCDO023YQQ/


title: TF ChIP-seq from K562 (ENCLB866ACX)

description:
https://www.encodeproject.org/experiments/ENCSR119FAD/
***************
biological replicate number: 1
technical replicate number: 1
description: K562 immortalized cell line stably expressing C-terminal eGFP-DEAF1 fusion protein.
experiment encode accession: ENCSR119FAD
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR328FYU, ENCSR775DEO
encode release date: 2020-08-03
lab: Michael Snyder, Stanford
library encode accession: ENCLB866ACX
size range: 450-650

source_name: Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting DEAF1

value: cell line

value: K562 cell line stably expressing a C-terminal LAP-tag containing eGFP, fused to DEAF1.

value: female

value: chronic myelogenous leukemia (CML)

value: 53 year

value: Michael Snyder, Stanford

value: Kevin White

value: ENCBS484EGI at ENCODE; https://www.encodeproject.org/ENCBS484EGI/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: TF ChIP-seq from HepG2 (ENCLB750JCZ)

description:
https://www.encodeproject.org/experiments/ENCSR911MML/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR911MML
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR042HRU
encode release date: 2020-06-30
lab: Richard Myers, HAIB
library encode accession: ENCLB750JCZ
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting TCF3

value: male

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS076MBZ at ENCODE; https://www.encodeproject.org/ENCBS076MBZ/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: DNase-seq from left colon (ENCLB828MNO)

description:
https://www.encodeproject.org/experiments/ENCSR867XFA/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR867XFA
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-09-28
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB828MNO

source_name: Homo sapiens female adult (59 years) left colon tissue, preserved by flash-freezing

value: left colon

value: tissue

value: DM:yes; HTN:yes; CAD:no

value: adult

value: 59 year

value: Yiing Lin, MD, PhD

value: ENCBS371XEW at ENCODE; https://www.encodeproject.org/ENCBS371XEW/

value: Derived from ENCODE donor ENCDO856ZOJ; https://www.encodeproject.org/ENCDO856ZOJ/


title: TF ChIP-seq from HepG2 (ENCLB334MPV)

description:
https://www.encodeproject.org/experiments/ENCSR914HPP/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR914HPP
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR019ZGX
encode release date: 2020-08-28
lab: Richard Myers, HAIB
library encode accession: ENCLB334MPV
fragmentation methods: sonication (generic)

value: cell line

value: ENCBS465FUX at ENCODE; https://www.encodeproject.org/ENCBS465FUX/


title: DNase-seq from T-cell (ENCLB433EUZ)

description:
https://www.encodeproject.org/experiments/ENCSR863LZT/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR863LZT
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-09-25
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB433EUZ

source_name: Homo sapiens male adult (39 years) T-cell primary cell

value: T-cell

value: primary cell

value: male

value: 39 year

value: John Stamatoyannopoulos, UW

value: AllCells

value: ENCBS381MWA at ENCODE; https://www.encodeproject.org/ENCBS381MWA/

value: Derived from ENCODE donor ENCDO483JHX; https://www.encodeproject.org/ENCDO483JHX/


title: TF ChIP-seq from K562 (ENCLB850ONO)

description:
https://www.encodeproject.org/experiments/ENCSR119FAD/
***************
biological replicate number: 2
technical replicate number: 1
description: K562 immortalized cell line stably expressing C-terminal eGFP-DEAF1 fusion protein.
experiment encode accession: ENCSR119FAD
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR328FYU, ENCSR775DEO
encode release date: 2020-08-03
lab: Michael Snyder, Stanford
library encode accession: ENCLB850ONO
size range: 450-650

value: K562 cell line stably expressing a C-terminal LAP-tag containing eGFP, fused to DEAF1.

value: female

value: chronic myelogenous leukemia (CML)

value: 53 year

value: Michael Snyder, Stanford

value: Kevin White

value: ENCBS499GWM at ENCODE; https://www.encodeproject.org/ENCBS499GWM/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: TF ChIP-seq from HepG2 (ENCLB224THN)

description:
https://www.encodeproject.org/experiments/ENCSR913ODG/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR913ODG
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR479INP
encode release date: 2020-06-30
lab: Richard Myers, HAIB
library encode accession: ENCLB224THN
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting MTF2

value: cell line

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS972GPS at ENCODE; https://www.encodeproject.org/ENCBS972GPS/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: TF ChIP-seq from HepG2 (ENCLB874OIZ)

description:
https://www.encodeproject.org/experiments/ENCSR910MUD/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR910MUD
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR690IYP
encode release date: 2020-07-01
lab: Richard Myers, HAIB
library encode accession: ENCLB874OIZ
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZNF138

value: male

value: ENCBS442PHY at ENCODE; https://www.encodeproject.org/ENCBS442PHY/


title: TF ChIP-seq from HepG2 (ENCLB121HGN)

description:
https://www.encodeproject.org/experiments/ENCSR168DYA/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR168DYA
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR693GOR
encode release date: 2020-07-14
lab: Richard Myers, HAIB
library encode accession: ENCLB121HGN
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting MAX

value: MAX

value: ENCBS761UIT at ENCODE; https://www.encodeproject.org/ENCBS761UIT/


title: TF ChIP-seq from HepG2 (ENCLB036EKW)

description:
https://www.encodeproject.org/experiments/ENCSR913ODG/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR913ODG
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR479INP
encode release date: 2020-06-30
lab: Richard Myers, HAIB
library encode accession: ENCLB036EKW
fragmentation methods: sonication (generic)

value: ENCBS334GUK at ENCODE; https://www.encodeproject.org/ENCBS334GUK/


title: TF ChIP-seq from HepG2 (ENCLB826XSA)

description:
https://www.encodeproject.org/experiments/ENCSR168DYA/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR168DYA
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR693GOR
encode release date: 2020-07-14
lab: Richard Myers, HAIB
library encode accession: ENCLB826XSA
fragmentation methods: sonication (generic)

value: ENCBS416IXA at ENCODE; https://www.encodeproject.org/ENCBS416IXA/


title: TF ChIP-seq from HepG2 (ENCLB956TOO)

description:
https://www.encodeproject.org/experiments/ENCSR910MUD/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR910MUD
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR690IYP
encode release date: 2020-07-01
lab: Richard Myers, HAIB
library encode accession: ENCLB956TOO
fragmentation methods: sonication (generic)

value: ENCBS172EJC at ENCODE; https://www.encodeproject.org/ENCBS172EJC/


title: DNase-seq from head of caudate nucleus (ENCLB876LLJ)

description:
https://www.encodeproject.org/experiments/ENCSR860UTH/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR860UTH
assay title: DNase-seq
assembly: GRCh38
encode release date: 2021-01-11
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB876LLJ

source_name: Homo sapiens male adult (86 years) head of caudate nucleus tissue

value: head of caudate nucleus

value: tissue

value: adult

value: 86 year

value: John Stamatoyannopoulos, UW

value: Rush University

value: ENCBS643QJE at ENCODE; https://www.encodeproject.org/ENCBS643QJE/

value: Derived from ENCODE donor ENCDO666UNK; https://www.encodeproject.org/ENCDO666UNK/


title: DNase-seq from breast epithelium (ENCLB132QCN)

description:
https://www.encodeproject.org/experiments/ENCSR859LTL/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR859LTL
assay title: DNase-seq
assembly: GRCh38
encode release date: 2019-11-08
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB132QCN

source_name: Homo sapiens female adult (51 years) breast epithelium tissue

value: breast epithelium

value: female

value: 51 year

value: Kristin Ardlie

value: ENCBS963JUQ at ENCODE; https://www.encodeproject.org/ENCBS963JUQ/

value: Derived from ENCODE donor ENCDO271OUW; https://www.encodeproject.org/ENCDO271OUW/


title: TF ChIP-seq from HepG2 (ENCLB146SPZ)

description:
https://www.encodeproject.org/experiments/ENCSR168AUX/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR168AUX
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR356LLA
encode release date: 2020-08-28
lab: Richard Myers, HAIB
library encode accession: ENCLB146SPZ
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting AHDC1

value: cell line

value: male

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS284ZOZ at ENCODE; https://www.encodeproject.org/ENCBS284ZOZ/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: DNase-seq from posterior cingulate gyrus (ENCLB932IAY)

description:
https://www.encodeproject.org/experiments/ENCSR502FPR/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR502FPR
assay title: DNase-seq
assembly: GRCh38
encode release date: 2021-01-11
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB932IAY

source_name: Homo sapiens female adult (90 or above years) posterior cingulate gyrus tissue with mild cognitive impairment

value: posterior cingulate gyrus

value: tissue

value: adult

value: 90 year or above

value: John Stamatoyannopoulos, UW

value: Rush University

value: ENCBS155BVN at ENCODE; https://www.encodeproject.org/ENCBS155BVN/

value: Derived from ENCODE donor ENCDO915WZE; https://www.encodeproject.org/ENCDO915WZE/


title: TF ChIP-seq from HepG2 (ENCLB671AFD)

description:
https://www.encodeproject.org/experiments/ENCSR544MTJ/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR544MTJ
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR621FPD
encode release date: 2020-08-28
lab: Richard Myers, HAIB
library encode accession: ENCLB671AFD
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting THAP8

value: cell line

value: ENCBS113RDH at ENCODE; https://www.encodeproject.org/ENCBS113RDH/


title: TF ChIP-seq from HepG2 (ENCLB173AAE)

description:
https://www.encodeproject.org/experiments/ENCSR543SBE/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR543SBE
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR730QNM
encode release date: 2020-08-17
lab: Richard Myers, HAIB
library encode accession: ENCLB173AAE
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting NFE2L1

value: male

value: hepatocellular carcinoma

value: ENCBS922PBQ at ENCODE; https://www.encodeproject.org/ENCBS922PBQ/


title: DNase-seq from posterior cingulate gyrus (ENCLB954JEA)

description:
https://www.encodeproject.org/experiments/ENCSR859HEW/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR859HEW
assay title: DNase-seq
assembly: GRCh38
encode release date: 2021-01-12
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB954JEA

value: female

value: ENCBS136XFT at ENCODE; https://www.encodeproject.org/ENCBS136XFT/

value: Derived from ENCODE donor ENCDO893GME; https://www.encodeproject.org/ENCDO893GME/


title: TF ChIP-seq from HepG2 (ENCLB991WHV)

description:
https://www.encodeproject.org/experiments/ENCSR165YVX/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR165YVX
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR693GOR
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB991WHV
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting MXD1

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS749VFT at ENCODE; https://www.encodeproject.org/ENCBS749VFT/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: TF ChIP-seq from HepG2 (ENCLB709WYX)

description:
https://www.encodeproject.org/experiments/ENCSR543SBE/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR543SBE
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR730QNM
encode release date: 2020-08-17
lab: Richard Myers, HAIB
library encode accession: ENCLB709WYX
fragmentation methods: sonication (generic)

value: ENCBS213QOW at ENCODE; https://www.encodeproject.org/ENCBS213QOW/


title: DNase-seq from CD8-positive, alpha-beta T cell (ENCLB386ZTZ)

description:
https://www.encodeproject.org/experiments/ENCSR321KUC/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR321KUC
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-10-05
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB386ZTZ

source_name: Homo sapiens male adult (38 years) CD8-positive, alpha-beta T primary cell

value: CD8-positive, alpha-beta T cell

value: primary cell

value: adult

value: 38 year

value: John Stamatoyannopoulos, UW

value: AllCells

value: ENCBS600WHD at ENCODE; https://www.encodeproject.org/ENCBS600WHD/

value: Derived from ENCODE donor ENCDO923WRX; https://www.encodeproject.org/ENCDO923WRX/


title: TF ChIP-seq from HepG2 (ENCLB801UVH)

description:
https://www.encodeproject.org/experiments/ENCSR165YVX/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR165YVX
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR693GOR
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB801UVH
fragmentation methods: sonication (generic)

value: cell line

value: male

value: hepatocellular carcinoma

value: ENCBS294LEU at ENCODE; https://www.encodeproject.org/ENCBS294LEU/


title: ATAC-seq from PC-3 (ENCLB029QHA)

description:
https://www.encodeproject.org/experiments/ENCSR499ASS/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR499ASS
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2020-10-08
lab: Michael Snyder, Stanford
library encode accession: ENCLB029QHA
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

source_name: Homo sapiens PC-3 cell line

value: grade IV, adenocarcinoma

value: 62 year

value: Mats Ljungman, UMichigan

value: ATCC

value: ENCBS132BFL at ENCODE; https://www.encodeproject.org/ENCBS132BFL/

value: Derived from ENCODE donor ENCDO349AAA; https://www.encodeproject.org/ENCDO349AAA/


title: TF ChIP-seq from HepG2 (ENCLB175MQQ)

description:
https://www.encodeproject.org/experiments/ENCSR902SBX/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR902SBX
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR693GOR
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB175MQQ
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting POGZ

value: POGZ

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS683ZTP at ENCODE; https://www.encodeproject.org/ENCBS683ZTP/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: TF ChIP-seq from HepG2 (ENCLB149TYW)

description:
https://www.encodeproject.org/experiments/ENCSR902SBX/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR902SBX
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR693GOR
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB149TYW
fragmentation methods: sonication (generic)

value: cell line

value: ENCBS241MET at ENCODE; https://www.encodeproject.org/ENCBS241MET/


title: ATAC-seq from PC-3 (ENCLB402HCF)

description:
https://www.encodeproject.org/experiments/ENCSR499ASS/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR499ASS
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2020-10-08
lab: Michael Snyder, Stanford
library encode accession: ENCLB402HCF
fragmentation methods: chemical (Tn5 transposase)
size range: 200-7000

value: male

value: adult

value: ENCBS235HQZ at ENCODE; https://www.encodeproject.org/ENCBS235HQZ/


title: TF ChIP-seq from HepG2 (ENCLB467OFW)

description:
https://www.encodeproject.org/experiments/ENCSR911MML/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR911MML
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR042HRU
encode release date: 2020-06-30
lab: Richard Myers, HAIB
library encode accession: ENCLB467OFW
fragmentation methods: sonication (generic)

value: hepatocellular carcinoma

value: ENCBS908VFO at ENCODE; https://www.encodeproject.org/ENCBS908VFO/


title: TF ChIP-seq from HepG2 (ENCLB517VXY)

description:
https://www.encodeproject.org/experiments/ENCSR902AMJ/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR902AMJ
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR042HRU, ENCSR693GOR
encode release date: 2020-10-22
lab: Richard Myers, HAIB
library encode accession: ENCLB517VXY
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZNF660

value: ENCBS758SOQ at ENCODE; https://www.encodeproject.org/ENCBS758SOQ/


title: TF ChIP-seq from HepG2 (ENCLB838YSJ)

description:
https://www.encodeproject.org/experiments/ENCSR902AMJ/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR902AMJ
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR042HRU, ENCSR693GOR
encode release date: 2020-10-22
lab: Richard Myers, HAIB
library encode accession: ENCLB838YSJ
fragmentation methods: sonication (generic)

value: ENCBS352XOC at ENCODE; https://www.encodeproject.org/ENCBS352XOC/


title: DNase-seq from head of caudate nucleus (ENCLB326YMQ)

description:
https://www.encodeproject.org/experiments/ENCSR856XGY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR856XGY
assay title: DNase-seq
assembly: GRCh38
encode release date: 2021-01-12
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB326YMQ

source_name: Homo sapiens female adult (89 years) head of caudate nucleus tissue with Alzheimer's disease

value: head of caudate nucleus

value: tissue

value: female

value: 89 year

value: John Stamatoyannopoulos, UW

value: Rush University

value: ENCBS487YQU at ENCODE; https://www.encodeproject.org/ENCBS487YQU/

value: Derived from ENCODE donor ENCDO830KFO; https://www.encodeproject.org/ENCDO830KFO/


title: TF ChIP-seq from HepG2 (ENCLB558SYK)

description:
https://www.encodeproject.org/experiments/ENCSR542PZA/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR542PZA
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR042HRU
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB558SYK
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZNF490

value: cell line

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS628VVD at ENCODE; https://www.encodeproject.org/ENCBS628VVD/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: DNase-seq from gastrocnemius medialis (ENCLB646BFR)

description:
https://www.encodeproject.org/experiments/ENCSR856XLJ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR856XLJ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2019-11-08
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB646BFR

source_name: Homo sapiens female adult (51 years) gastrocnemius medialis tissue

value: gastrocnemius medialis

value: adult

value: 51 year

value: Kristin Ardlie

value: ENCBS376EJL at ENCODE; https://www.encodeproject.org/ENCBS376EJL/

value: Derived from ENCODE donor ENCDO271OUW; https://www.encodeproject.org/ENCDO271OUW/


title: TF ChIP-seq from HepG2 (ENCLB697WFO)

description:
https://www.encodeproject.org/experiments/ENCSR542PZA/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR542PZA
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR042HRU
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB697WFO
fragmentation methods: sonication (generic)

value: male

value: hepatocellular carcinoma

value: ENCBS386CGJ at ENCODE; https://www.encodeproject.org/ENCBS386CGJ/


title: TF ChIP-seq from HepG2 (ENCLB131RFZ)

description:
https://www.encodeproject.org/experiments/ENCSR168AUX/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR168AUX
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR356LLA
encode release date: 2020-08-28
lab: Richard Myers, HAIB
library encode accession: ENCLB131RFZ
fragmentation methods: sonication (generic)

value: ENCBS142SQA at ENCODE; https://www.encodeproject.org/ENCBS142SQA/


title: TF ChIP-seq from HepG2 (ENCLB734IBN)

description:
https://www.encodeproject.org/experiments/ENCSR544MTJ/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR544MTJ
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR621FPD
encode release date: 2020-08-28
lab: Richard Myers, HAIB
library encode accession: ENCLB734IBN
fragmentation methods: sonication (generic)

value: cell line

value: ENCBS482QVZ at ENCODE; https://www.encodeproject.org/ENCBS482QVZ/


title: TF ChIP-seq from HepG2 (ENCLB328SQQ)

description:
https://www.encodeproject.org/experiments/ENCSR540LPD/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR540LPD
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR730QNM
encode release date: 2020-08-17
lab: Richard Myers, HAIB
library encode accession: ENCLB328SQQ
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZNF839

value: child

value: 15 year

value: ENCBS773FLJ at ENCODE; https://www.encodeproject.org/ENCBS773FLJ/


title: DNase-seq from T-cell (ENCLB916HFG)

description:
https://www.encodeproject.org/experiments/ENCSR310ZGQ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR310ZGQ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-09-25
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB916HFG

source_name: Homo sapiens male adult (26 years) T-cell primary cell

value: T-cell

value: primary cell

value: 26 year

value: John Stamatoyannopoulos, UW

value: AllCells

value: ENCBS080XHY at ENCODE; https://www.encodeproject.org/ENCBS080XHY/

value: Derived from ENCODE donor ENCDO838UOH; https://www.encodeproject.org/ENCDO838UOH/


title: TF ChIP-seq from HepG2 (ENCLB012LIY)

description:
https://www.encodeproject.org/experiments/ENCSR540LPD/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR540LPD
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR730QNM
encode release date: 2020-08-17
lab: Richard Myers, HAIB
library encode accession: ENCLB012LIY
fragmentation methods: sonication (generic)

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS814MWZ at ENCODE; https://www.encodeproject.org/ENCBS814MWZ/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: DNase-seq from head of caudate nucleus (ENCLB812SLF)

description:
https://www.encodeproject.org/experiments/ENCSR116UQH/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR116UQH
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-09-28
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB812SLF

source_name: Homo sapiens female adult (89 years) head of caudate nucleus tissue

value: head of caudate nucleus

value: tissue

value: female

value: adult

value: 89 year

value: Rush University

value: ENCBS713GNA at ENCODE; https://www.encodeproject.org/ENCBS713GNA/

value: Derived from ENCODE donor ENCDO707TUE; https://www.encodeproject.org/ENCDO707TUE/


title: TF ChIP-seq from HepG2 (ENCLB954ZQC)

description:
https://www.encodeproject.org/experiments/ENCSR895KNN/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR895KNN
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR555EMB
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB954ZQC
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting DZIP1

value: cell line

value: male

value: hepatocellular carcinoma

value: child

value: 15 year

value: ENCBS004PHO at ENCODE; https://www.encodeproject.org/ENCBS004PHO/


title: DNase-seq from lung (ENCLB278FKS)

description:
https://www.encodeproject.org/experiments/ENCSR627NIF/
***************
biological replicate number: 1
technical replicate number: 1
description: DNase-seq on 58 day old fetal male human lung tissue
experiment encode accession: ENCSR627NIF
assay title: DNase-seq
assembly: hg19, GRCh38
encode release date: 2015-08-31
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB278FKS

source_name: Homo sapiens male embryo (58 days) lung tissue

value: lung

value: embryonic

value: 58 day

value: John Stamatoyannopoulos, UW

value: BDRL

value: ENCBS619TAO at ENCODE; https://www.encodeproject.org/ENCBS619TAO/

value: Derived from ENCODE donor ENCDO652XOU; https://www.encodeproject.org/ENCDO652XOU/