title: TF ChIP-seq from HepG2 (ENCLB073KFY)

description:
https://www.encodeproject.org/experiments/ENCSR950FIL/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR950FIL
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB073KFY
fragmentation methods: sonication (generic)

value: ENCBS134AQD at ENCODE; https://www.encodeproject.org/ENCBS134AQD/


title: TF ChIP-seq from HepG2 (ENCLB333UGF)

status: Public on Mar 30 2021

type: SRA

city: Stanford

first: ENCODE

last: DCC

state: CA

address: 300 Pasteur Dr

country: USA

institute: ENCODE DCC

description:
https://www.encodeproject.org/experiments/ENCSR563SHQ/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR563SHQ
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB333UGF
fragmentation methods: sonication (generic)

library_source: genomic

data_processing: See GSM*_README.txt supplementary file linked below

molecule: genomic DNA

organism: Homo sapiens

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZFP36L2

tag: antibody

tag: line

value: cell line

tag: biosample encode accession

tag: Sex

value: male

tag: health state

value: hepatocellular carcinoma

tag: dev stage

value: child

tag: age

value: 15 year

tag: lab

value: Richard Myers, HAIB

tag: source

value: Richard Myers

tag: link

value: ENCBS933MZA at ENCODE; https://www.encodeproject.org/ENCBS933MZA/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: TF ChIP-seq from HepG2 (ENCLB457EMM)

description:
https://www.encodeproject.org/experiments/ENCSR196NVU/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR196NVU
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB457EMM
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ATRX

value: ATRX

value: ENCBS680TXM at ENCODE; https://www.encodeproject.org/ENCBS680TXM/


title: TF ChIP-seq from HepG2 (ENCLB699MCU)

description:
https://www.encodeproject.org/experiments/ENCSR563SHQ/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR563SHQ
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB699MCU
fragmentation methods: sonication (generic)

value: ENCBS504IBO at ENCODE; https://www.encodeproject.org/ENCBS504IBO/


title: TF ChIP-seq from HepG2 (ENCLB329DLN)

description:
https://www.encodeproject.org/experiments/ENCSR935GZV/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR935GZV
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB329DLN
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting NFYB

value: NFYB

value: ENCBS471LWZ at ENCODE; https://www.encodeproject.org/ENCBS471LWZ/


title: DNase-seq from heart left ventricle (ENCLB231DPY)

description:
https://www.encodeproject.org/experiments/ENCSR946DXB/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR946DXB
assay title: DNase-seq
assembly: hg19, GRCh38
encode release date: 2018-01-29
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB231DPY

source_name: Homo sapiens female embryo (103 days) heart left ventricle tissue

value: heart left ventricle

value: tissue

value: female

value: embryonic

value: 103 day

value: John Stamatoyannopoulos, UW

value: BDRL

value: ENCBS743EKM at ENCODE; https://www.encodeproject.org/ENCBS743EKM/

value: Derived from ENCODE donor ENCDO293DRY; https://www.encodeproject.org/ENCDO293DRY/


title: TF ChIP-seq from HepG2 (ENCLB831NWK)

description:
https://www.encodeproject.org/experiments/ENCSR563JME/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR563JME
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB831NWK
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZNF256

value: cell line

value: male

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS200ZCF at ENCODE; https://www.encodeproject.org/ENCBS200ZCF/


title: TF ChIP-seq from HepG2 (ENCLB202DOA)

description:
https://www.encodeproject.org/experiments/ENCSR563JME/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR563JME
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB202DOA
fragmentation methods: sonication (generic)

value: ENCBS371MPW at ENCODE; https://www.encodeproject.org/ENCBS371MPW/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: TF ChIP-seq from HepG2 (ENCLB373YXA)

description:
https://www.encodeproject.org/experiments/ENCSR196NVU/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR196NVU
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB373YXA
fragmentation methods: sonication (generic)

value: ATRX

value: ENCBS885WYE at ENCODE; https://www.encodeproject.org/ENCBS885WYE/


title: TF ChIP-seq from HepG2 (ENCLB867VGM)

description:
https://www.encodeproject.org/experiments/ENCSR935GZV/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR935GZV
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB867VGM
fragmentation methods: sonication (generic)

value: NFYB

value: ENCBS948CVC at ENCODE; https://www.encodeproject.org/ENCBS948CVC/


title: TF ChIP-seq from HepG2 (ENCLB039CXQ)

description:
https://www.encodeproject.org/experiments/ENCSR194NVP/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR194NVP
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-14
lab: Richard Myers, HAIB
library encode accession: ENCLB039CXQ
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting MTF1

value: ENCBS984YEH at ENCODE; https://www.encodeproject.org/ENCBS984YEH/


title: TF ChIP-seq from HepG2 (ENCLB952KHW)

description:
https://www.encodeproject.org/experiments/ENCSR194NVP/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR194NVP
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-14
lab: Richard Myers, HAIB
library encode accession: ENCLB952KHW
fragmentation methods: sonication (generic)

value: ENCBS224DDU at ENCODE; https://www.encodeproject.org/ENCBS224DDU/


title: TF ChIP-seq from HepG2 (ENCLB149AOM)

description:
https://www.encodeproject.org/experiments/ENCSR561BQM/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR561BQM
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB149AOM
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting SIX1

value: ENCBS284JWM at ENCODE; https://www.encodeproject.org/ENCBS284JWM/


title: TF ChIP-seq from HepG2 (ENCLB855RYN)

description:
https://www.encodeproject.org/experiments/ENCSR925TWM/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR925TWM
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB855RYN
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ETV6

value: cell line

value: ENCBS336DUC at ENCODE; https://www.encodeproject.org/ENCBS336DUC/


title: TF ChIP-seq from HepG2 (ENCLB950SLO)

description:
https://www.encodeproject.org/experiments/ENCSR925TWM/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR925TWM
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB950SLO
fragmentation methods: sonication (generic)

value: male

value: hepatocellular carcinoma

value: ENCBS419QOW at ENCODE; https://www.encodeproject.org/ENCBS419QOW/


title: TF ChIP-seq from HepG2 (ENCLB247LSY)

description:
https://www.encodeproject.org/experiments/ENCSR554YEH/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR554YEH
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB247LSY
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting TOE1

value: child

value: 15 year

value: Richard Myers, HAIB

value: ENCBS592QJT at ENCODE; https://www.encodeproject.org/ENCBS592QJT/


title: TF ChIP-seq from HepG2 (ENCLB488DEV)

description:
https://www.encodeproject.org/experiments/ENCSR185AYQ/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR185AYQ
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ, ENCSR693GOR
encode release date: 2021-01-29
lab: Richard Myers, HAIB
library encode accession: ENCLB488DEV
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting DR1

value: Richard Myers

value: ENCBS560QNG at ENCODE; https://www.encodeproject.org/ENCBS560QNG/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: TF ChIP-seq from HepG2 (ENCLB056UID)

description:
https://www.encodeproject.org/experiments/ENCSR949OEV/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR949OEV
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB056UID
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZFY

value: ZFY

value: ENCBS389IZS at ENCODE; https://www.encodeproject.org/ENCBS389IZS/


title: TF ChIP-seq from HepG2 (ENCLB648TUS)

description:
https://www.encodeproject.org/experiments/ENCSR554YEH/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR554YEH
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB648TUS
fragmentation methods: sonication (generic)

value: ENCBS664ROG at ENCODE; https://www.encodeproject.org/ENCBS664ROG/


title: TF ChIP-seq from HepG2 (ENCLB336FRQ)

description:
https://www.encodeproject.org/experiments/ENCSR929IMB/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR929IMB
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB336FRQ
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting AKNA

value: AKNA

value: ENCBS772AKE at ENCODE; https://www.encodeproject.org/ENCBS772AKE/


title: TF ChIP-seq from HepG2 (ENCLB677XKK)

description:
https://www.encodeproject.org/experiments/ENCSR924LSO/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR924LSO
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB677XKK
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting E2F4

value: cell line

value: ENCBS698TDS at ENCODE; https://www.encodeproject.org/ENCBS698TDS/


title: TF ChIP-seq from HepG2 (ENCLB280DPR)

description:
https://www.encodeproject.org/experiments/ENCSR929IMB/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR929IMB
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB280DPR
fragmentation methods: sonication (generic)

value: male

value: ENCBS687PTV at ENCODE; https://www.encodeproject.org/ENCBS687PTV/


title: TF ChIP-seq from HepG2 (ENCLB261AUZ)

description:
https://www.encodeproject.org/experiments/ENCSR924LSO/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR924LSO
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB261AUZ
fragmentation methods: sonication (generic)

value: hepatocellular carcinoma

value: ENCBS520NYC at ENCODE; https://www.encodeproject.org/ENCBS520NYC/


title: TF ChIP-seq from HepG2 (ENCLB941OSO)

description:
https://www.encodeproject.org/experiments/ENCSR181ABP/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR181ABP
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB941OSO
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZNF768

value: child

value: 15 year

value: ENCBS693VYA at ENCODE; https://www.encodeproject.org/ENCBS693VYA/


title: TF ChIP-seq from HepG2 (ENCLB390SFQ)

description:
https://www.encodeproject.org/experiments/ENCSR181ABP/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR181ABP
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB390SFQ
fragmentation methods: sonication (generic)

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS307JTG at ENCODE; https://www.encodeproject.org/ENCBS307JTG/


title: TF ChIP-seq from HepG2 (ENCLB545TRT)

description:
https://www.encodeproject.org/experiments/ENCSR369TCR/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR369TCR
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB545TRT
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZNF331

value: ENCBS440SRQ at ENCODE; https://www.encodeproject.org/ENCBS440SRQ/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: TF ChIP-seq from HepG2 (ENCLB571AZO)

description:
https://www.encodeproject.org/experiments/ENCSR369TCR/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR369TCR
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB571AZO
fragmentation methods: sonication (generic)

value: ENCBS338POV at ENCODE; https://www.encodeproject.org/ENCBS338POV/


title: TF ChIP-seq from HepG2 (ENCLB999SSB)

description:
https://www.encodeproject.org/experiments/ENCSR180MUU/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR180MUU
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-08-28
lab: Richard Myers, HAIB
library encode accession: ENCLB999SSB
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting RREB1

value: ENCBS733BEZ at ENCODE; https://www.encodeproject.org/ENCBS733BEZ/


title: TF ChIP-seq from HepG2 (ENCLB980FYG)

description:
https://www.encodeproject.org/experiments/ENCSR552YWL/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR552YWL
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB980FYG
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting KLF12

value: ENCBS606MQO at ENCODE; https://www.encodeproject.org/ENCBS606MQO/


title: TF ChIP-seq from HepG2 (ENCLB008FSE)

description:
https://www.encodeproject.org/experiments/ENCSR552YWL/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR552YWL
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB008FSE
fragmentation methods: sonication (generic)

value: cell line

value: ENCBS913CMF at ENCODE; https://www.encodeproject.org/ENCBS913CMF/


title: TF ChIP-seq from HepG2 (ENCLB539FNH)

description:
https://www.encodeproject.org/experiments/ENCSR561BQM/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR561BQM
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB539FNH
fragmentation methods: sonication (generic)

value: male

value: ENCBS809IGT at ENCODE; https://www.encodeproject.org/ENCBS809IGT/


title: TF ChIP-seq from K562 (ENCLB433RVG)

description:
https://www.encodeproject.org/experiments/ENCSR699RWG/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-ZNF215 ChIP-seq on human K562
experiment encode accession: ENCSR699RWG
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR328FYU, ENCSR963WAA
encode release date: 2020-08-03
lab: Michael Snyder, Stanford
library encode accession: ENCLB433RVG
fragmentation methods: sonication (Bioruptor Pico)
size range: 250-450

source_name: Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting ZNF215

value: female

value: chronic myelogenous leukemia (CML)

value: adult

value: 53 year

value: Michael Snyder, Stanford

value: Kevin White

value: ENCBS473BHP at ENCODE; https://www.encodeproject.org/ENCBS473BHP/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: TF ChIP-seq from HepG2 (ENCLB817QBD)

description:
https://www.encodeproject.org/experiments/ENCSR918OKK/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR918OKK
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB817QBD
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting TAF1

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS701CHV at ENCODE; https://www.encodeproject.org/ENCBS701CHV/


title: TF ChIP-seq from HepG2 (ENCLB976JQL)

description:
https://www.encodeproject.org/experiments/ENCSR180MUU/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR180MUU
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-08-28
lab: Richard Myers, HAIB
library encode accession: ENCLB976JQL
fragmentation methods: sonication (generic)

value: cell line

value: ENCBS736PJX at ENCODE; https://www.encodeproject.org/ENCBS736PJX/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: TF ChIP-seq from HepG2 (ENCLB624MEH)

description:
https://www.encodeproject.org/experiments/ENCSR173USN/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR173USN
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB624MEH
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZBTB43

value: male

value: ENCBS250YNK at ENCODE; https://www.encodeproject.org/ENCBS250YNK/


title: TF ChIP-seq from K562 (ENCLB650KBV)

description:
https://www.encodeproject.org/experiments/ENCSR525VAT/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-JUNB ChIP-seq on human K562
experiment encode accession: ENCSR525VAT
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR025GHD, ENCSR328FYU
encode release date: 2020-08-03
lab: Michael Snyder, Stanford
library encode accession: ENCLB650KBV
size range: 450-650

source_name: Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting JUNB

value: JUNB

tag: description

value: K562 cell line stably expressing a C-terminal LAP-tag containing eGFP, fused to JunB.

value: female

value: chronic myelogenous leukemia (CML)

value: adult

value: ENCBS801XKS at ENCODE; https://www.encodeproject.org/ENCBS801XKS/


title: DNase-seq from CD4-positive, alpha-beta T cell (ENCLB284JNM)

description:
https://www.encodeproject.org/experiments/ENCSR697FME/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR697FME
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-10-05
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB284JNM

source_name: Homo sapiens male adult (38 years) CD4-positive, alpha-beta T primary cell

value: CD4-positive, alpha-beta T cell

value: primary cell

value: 38 year

value: John Stamatoyannopoulos, UW

value: AllCells

value: ENCBS172BSU at ENCODE; https://www.encodeproject.org/ENCBS172BSU/

value: Derived from ENCODE donor ENCDO923WRX; https://www.encodeproject.org/ENCDO923WRX/


title: TF ChIP-seq from HepG2 (ENCLB403KBY)

description:
https://www.encodeproject.org/experiments/ENCSR173USN/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR173USN
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB403KBY
fragmentation methods: sonication (generic)

value: cell line

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS237OXZ at ENCODE; https://www.encodeproject.org/ENCBS237OXZ/


title: TF ChIP-seq from HepG2 (ENCLB006ONK)

description:
https://www.encodeproject.org/experiments/ENCSR367KYL/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR367KYL
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB006ONK
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZHX3

value: male

value: ENCBS968ZRQ at ENCODE; https://www.encodeproject.org/ENCBS968ZRQ/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: TF ChIP-seq from HepG2 (ENCLB177LVE)

description:
https://www.encodeproject.org/experiments/ENCSR918OKK/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR918OKK
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB177LVE
fragmentation methods: sonication (generic)

value: ENCBS677QES at ENCODE; https://www.encodeproject.org/ENCBS677QES/


title: DNase-seq from heart right ventricle (ENCLB378LMG)

description:
https://www.encodeproject.org/experiments/ENCSR694LFE/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR694LFE
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-09-28
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB378LMG

source_name: Homo sapiens male adult (61 years) heart right ventricle tissue

value: heart right ventricle

value: tissue

value: nonischemic (EF 11% LVEDD 7.7; RV severe dilation, severe dysfunction)

value: adult

value: 61 year

value: Michael Snyder, Stanford

value: Shin Lin

value: ENCBS059BTM at ENCODE; https://www.encodeproject.org/ENCBS059BTM/

value: Derived from ENCODE donor ENCDO808ASZ; https://www.encodeproject.org/ENCDO808ASZ/


title: TF ChIP-seq from K562 (ENCLB754ULF)

description:
https://www.encodeproject.org/experiments/ENCSR699RWG/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-ZNF215 ChIP-seq on human K562
experiment encode accession: ENCSR699RWG
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR328FYU, ENCSR963WAA
encode release date: 2020-08-03
lab: Michael Snyder, Stanford
library encode accession: ENCLB754ULF
fragmentation methods: sonication (Bioruptor Pico)
size range: 250-450

value: cell line

value: female

value: chronic myelogenous leukemia (CML)

value: 53 year

value: Kevin White

value: ENCBS414ORK at ENCODE; https://www.encodeproject.org/ENCBS414ORK/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: TF ChIP-seq from HepG2 (ENCLB823FCB)

description:
https://www.encodeproject.org/experiments/ENCSR363ASY/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR363ASY
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-14
lab: Richard Myers, HAIB
library encode accession: ENCLB823FCB
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZNF629

value: male

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS797BTI at ENCODE; https://www.encodeproject.org/ENCBS797BTI/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: TF ChIP-seq from HepG2 (ENCLB389VPE)

description:
https://www.encodeproject.org/experiments/ENCSR363ASY/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR363ASY
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-14
lab: Richard Myers, HAIB
library encode accession: ENCLB389VPE
fragmentation methods: sonication (generic)

value: ENCBS638VIN at ENCODE; https://www.encodeproject.org/ENCBS638VIN/


title: TF ChIP-seq from HepG2 (ENCLB657XDO)

description:
https://www.encodeproject.org/experiments/ENCSR551QJT/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR551QJT
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB657XDO
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting THRA

value: THRA

value: ENCBS745RSD at ENCODE; https://www.encodeproject.org/ENCBS745RSD/


title: DNase-seq from omental fat pad (ENCLB171OFY)

description:
https://www.encodeproject.org/experiments/ENCSR693UHT/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR693UHT
assay title: DNase-seq
assembly: GRCh38
encode release date: 2019-11-08
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB171OFY

source_name: Homo sapiens female adult (51 years) omental fat pad tissue

value: omental fat pad

value: tissue

value: female

value: adult

value: 51 year

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS148MNC at ENCODE; https://www.encodeproject.org/ENCBS148MNC/

value: Derived from ENCODE donor ENCDO271OUW; https://www.encodeproject.org/ENCDO271OUW/


title: TF ChIP-seq from K562 (ENCLB872ZKZ)

description:
https://www.encodeproject.org/experiments/ENCSR692RET/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-NR4A1 ChIP-seq on human K562
experiment encode accession: ENCSR692RET
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR328FYU, ENCSR310OPP
encode release date: 2020-08-03
lab: Michael Snyder, Stanford
library encode accession: ENCLB872ZKZ
fragmentation methods: sonication (Bioruptor Pico)
size range: 250-450

source_name: Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting NR4A1

value: cell line

value: chronic myelogenous leukemia (CML)

value: 53 year

value: Michael Snyder, Stanford

value: Kevin White

value: ENCBS041NXN at ENCODE; https://www.encodeproject.org/ENCBS041NXN/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: TF ChIP-seq from HepG2 (ENCLB705XKM)

description:
https://www.encodeproject.org/experiments/ENCSR551QJT/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR551QJT
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB705XKM
fragmentation methods: sonication (generic)

value: THRA

value: male

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS810FMG at ENCODE; https://www.encodeproject.org/ENCBS810FMG/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: TF ChIP-seq from K562 (ENCLB805RGQ)

description:
https://www.encodeproject.org/experiments/ENCSR692RET/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-NR4A1 ChIP-seq on human K562
experiment encode accession: ENCSR692RET
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR328FYU, ENCSR310OPP
encode release date: 2020-08-03
lab: Michael Snyder, Stanford
library encode accession: ENCLB805RGQ
fragmentation methods: sonication (Bioruptor Pico)
size range: 250-450

value: female

value: adult

value: ENCBS741XDL at ENCODE; https://www.encodeproject.org/ENCBS741XDL/


title: TF ChIP-seq from HepG2 (ENCLB060AAM)

description:
https://www.encodeproject.org/experiments/ENCSR171KUL/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR171KUL
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-14
lab: Richard Myers, HAIB
library encode accession: ENCLB060AAM
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZNF513

value: cell line

value: ENCBS221YNQ at ENCODE; https://www.encodeproject.org/ENCBS221YNQ/


title: TF ChIP-seq from K562 (ENCLB356KLK)

description:
https://www.encodeproject.org/experiments/ENCSR525VAT/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-JUNB ChIP-seq on human K562
experiment encode accession: ENCSR525VAT
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR025GHD, ENCSR328FYU
encode release date: 2020-08-03
lab: Michael Snyder, Stanford
library encode accession: ENCLB356KLK
size range: 450-650

value: JUNB

value: K562 cell line stably expressing a C-terminal LAP-tag containing eGFP, fused to JunB.

value: chronic myelogenous leukemia (CML)

value: 53 year

value: Michael Snyder, Stanford

value: Kevin White

value: ENCBS133ZSU at ENCODE; https://www.encodeproject.org/ENCBS133ZSU/


title: TF ChIP-seq from HepG2 (ENCLB462CIK)

description:
https://www.encodeproject.org/experiments/ENCSR171KUL/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR171KUL
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-14
lab: Richard Myers, HAIB
library encode accession: ENCLB462CIK
fragmentation methods: sonication (generic)

value: male

value: hepatocellular carcinoma

value: child

value: 15 year

value: ENCBS409KOB at ENCODE; https://www.encodeproject.org/ENCBS409KOB/


title: TF ChIP-seq from HepG2 (ENCLB486YQP)

description:
https://www.encodeproject.org/experiments/ENCSR915APT/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR915APT
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB486YQP
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZCCHC11

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS491PEV at ENCODE; https://www.encodeproject.org/ENCBS491PEV/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: DNase-seq from Peyer's patch (ENCLB382MZR)

description:
https://www.encodeproject.org/experiments/ENCSR689DSM/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR689DSM
assay title: DNase-seq
assembly: GRCh38
encode release date: 2019-11-08
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB382MZR

source_name: Homo sapiens female adult (53 years) Peyer's patch tissue

value: Peyer's patch

value: tissue

value: female

value: adult

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS599TML at ENCODE; https://www.encodeproject.org/ENCBS599TML/

value: Derived from ENCODE donor ENCDO793LXB; https://www.encodeproject.org/ENCDO793LXB/


title: DNase-seq from placenta (ENCLB089QSM)

description:
https://www.encodeproject.org/experiments/ENCSR689FYA/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR689FYA
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-09-28
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB089QSM

source_name: Homo sapiens male embryo placenta tissue

value: placenta

value: male

value: embryonic

value: unknown

value: John Stamatoyannopoulos

value: ENCBS160VHH at ENCODE; https://www.encodeproject.org/ENCBS160VHH/

value: Derived from ENCODE donor ENCDO824PZQ; https://www.encodeproject.org/ENCDO824PZQ/


title: DNase-seq from head of caudate nucleus (ENCLB563SOA)

description:
https://www.encodeproject.org/experiments/ENCSR688AWP/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR688AWP
assay title: DNase-seq
assembly: GRCh38
encode release date: 2021-01-11
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB563SOA

source_name: Homo sapiens female adult (90 or above years) head of caudate nucleus tissue

value: head of caudate nucleus

value: 90 year or above

value: Rush University

value: ENCBS405EPC at ENCODE; https://www.encodeproject.org/ENCBS405EPC/

value: Derived from ENCODE donor ENCDO980GMJ; https://www.encodeproject.org/ENCDO980GMJ/


title: TF ChIP-seq from HepG2 (ENCLB630MLM)

description:
https://www.encodeproject.org/experiments/ENCSR915APT/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR915APT
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB630MLM
fragmentation methods: sonication (generic)

value: cell line

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS159SFC at ENCODE; https://www.encodeproject.org/ENCBS159SFC/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: DNase-seq from gastrocnemius medialis (ENCLB506MWS)

description:
https://www.encodeproject.org/experiments/ENCSR686WJL/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR686WJL
assay title: DNase-seq
assembly: GRCh38
encode release date: 2019-11-08
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB506MWS

source_name: Homo sapiens female adult (53 years) gastrocnemius medialis tissue

value: gastrocnemius medialis

value: tissue

value: female

value: adult

value: 53 year

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS667WEY at ENCODE; https://www.encodeproject.org/ENCBS667WEY/

value: Derived from ENCODE donor ENCDO793LXB; https://www.encodeproject.org/ENCDO793LXB/


title: DNase-seq from gastrocnemius medialis (ENCLB167NVD)

description:
https://www.encodeproject.org/experiments/ENCSR171ADO/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR171ADO
assay title: DNase-seq
assembly: GRCh38
encode release date: 2018-02-28
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB167NVD
instrument models: Illumina NextSeq 500,Illumina HiSeq 2500

source_name: Homo sapiens male adult (37 years) gastrocnemius medialis tissue

value: male

value: 37 year

value: ENCBS730FTQ at ENCODE; https://www.encodeproject.org/ENCBS730FTQ/

value: Derived from ENCODE donor ENCDO845WKR; https://www.encodeproject.org/ENCDO845WKR/


title: TF ChIP-seq from HepG2 (ENCLB004YIV)

description:
https://www.encodeproject.org/experiments/ENCSR367KYL/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR367KYL
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB004YIV
fragmentation methods: sonication (generic)

value: cell line

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: ENCBS985WMU at ENCODE; https://www.encodeproject.org/ENCBS985WMU/


title: DNase-seq from posterior cingulate gyrus (ENCLB893SFK)

description:
https://www.encodeproject.org/experiments/ENCSR694DOX/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR694DOX
assay title: DNase-seq
assembly: GRCh38
encode release date: 2021-01-12
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB893SFK

source_name: Homo sapiens male adult (83 years) posterior cingulate gyrus tissue

value: posterior cingulate gyrus

value: tissue

value: 83 year

value: Rush University

value: ENCBS768XJX at ENCODE; https://www.encodeproject.org/ENCBS768XJX/

value: Derived from ENCODE donor ENCDO736YJH; https://www.encodeproject.org/ENCDO736YJH/


title: DNase-seq from head of caudate nucleus (ENCLB082XEF)

description:
https://www.encodeproject.org/experiments/ENCSR682ZZT/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR682ZZT
assay title: DNase-seq
assembly: GRCh38
encode release date: 2021-01-11
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB082XEF

source_name: Homo sapiens female adult (83 years) head of caudate nucleus tissue

value: head of caudate nucleus

value: female

value: adult

value: John Stamatoyannopoulos, UW

value: ENCBS703VEL at ENCODE; https://www.encodeproject.org/ENCBS703VEL/

value: Derived from ENCODE donor ENCDO394FZZ; https://www.encodeproject.org/ENCDO394FZZ/


title: TF ChIP-seq from HepG2 (ENCLB752PPW)

description:
https://www.encodeproject.org/experiments/ENCSR169JRW/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR169JRW
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB752PPW
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZSCAN20

value: cell line

value: male

value: hepatocellular carcinoma

value: Richard Myers

value: ENCBS940EMX at ENCODE; https://www.encodeproject.org/ENCBS940EMX/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: DNase-seq from dorsolateral prefrontal cortex (ENCLB990VZX)

description:
https://www.encodeproject.org/experiments/ENCSR686LOE/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR686LOE
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-09-28
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB990VZX

source_name: Homo sapiens female adult (89 years) dorsolateral prefrontal cortex tissue

value: dorsolateral prefrontal cortex

value: tissue

value: 89 year

value: ENCBS975KDT at ENCODE; https://www.encodeproject.org/ENCBS975KDT/

value: Derived from ENCODE donor ENCDO707TUE; https://www.encodeproject.org/ENCDO707TUE/


title: DNase-seq from head of caudate nucleus (ENCLB854CSH)

description:
https://www.encodeproject.org/experiments/ENCSR677XGD/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR677XGD
assay title: DNase-seq
assembly: GRCh38
encode release date: 2021-01-12
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB854CSH

source_name: Homo sapiens male adult (89 years) head of caudate nucleus tissue with mild cognitive impairment

value: head of caudate nucleus

value: Rush University

value: ENCBS715SMK at ENCODE; https://www.encodeproject.org/ENCBS715SMK/

value: Derived from ENCODE donor ENCDO697SWU; https://www.encodeproject.org/ENCDO697SWU/


title: TF ChIP-seq from HepG2 (ENCLB341ARL)

description:
https://www.encodeproject.org/experiments/ENCSR549PAU/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR549PAU
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB341ARL
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZBTB21

value: child

value: 15 year

value: Richard Myers, HAIB

value: ENCBS890GFQ at ENCODE; https://www.encodeproject.org/ENCBS890GFQ/


title: DNase-seq from sciatic nerve (ENCLB399BJT)

description:
https://www.encodeproject.org/experiments/ENCSR672MOG/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR672MOG
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-10-02
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB399BJT

source_name: Homo sapiens female adult (41 years) sciatic nerve tissue, preserved by flash-freezing

value: sciatic nerve

value: female

value: DM:no; HTN:no; CAD:no

value: adult

value: 41 year

value: Michael Snyder, Stanford

value: Yiing Lin, MD, PhD

value: ENCBS583IBT at ENCODE; https://www.encodeproject.org/ENCBS583IBT/

value: Derived from ENCODE donor ENCDO575WHY; https://www.encodeproject.org/ENCDO575WHY/


title: TF ChIP-seq from HepG2 (ENCLB187PKE)

description:
https://www.encodeproject.org/experiments/ENCSR167MTG/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR167MTG
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB187PKE
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting STAG1

value: cell line

value: male

value: hepatocellular carcinoma

value: Richard Myers

value: ENCBS096VSJ at ENCODE; https://www.encodeproject.org/ENCBS096VSJ/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: DNase-seq from HFFc6 (ENCLB387KUB)

description:
https://www.encodeproject.org/experiments/ENCSR672EWY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR672EWY
assay title: DNase-seq
assembly: hg19, GRCh38
encode release date: 2018-10-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB387KUB

source_name: Homo sapiens HFFc6 cell line, preserved by cryopreservation

value: Clonal line 6 derived from hTert immortalized HFF parental line

value: normal

value: newborn

value: 0 year

value: Job Dekker, UMass

value: Job Dekker

tag: passage number

value: ENCBS756WUB at ENCODE; https://www.encodeproject.org/ENCBS756WUB/

value: Derived from ENCODE donor ENCDO737WWC; https://www.encodeproject.org/ENCDO737WWC/


title: TF ChIP-seq from HepG2 (ENCLB988DRZ)

description:
https://www.encodeproject.org/experiments/ENCSR167MTG/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR167MTG
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB988DRZ
fragmentation methods: sonication (generic)

value: child

value: 15 year

value: Richard Myers, HAIB

value: ENCBS251AWY at ENCODE; https://www.encodeproject.org/ENCBS251AWY/


title: DNase-seq from placenta (ENCLB912CZU)

description:
https://www.encodeproject.org/experiments/ENCSR685PCS/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR685PCS
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-09-28
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB912CZU

value: placenta

value: tissue

value: male

value: embryonic

value: unknown

value: John Stamatoyannopoulos, UW

value: John Stamatoyannopoulos

value: ENCBS466NCI at ENCODE; https://www.encodeproject.org/ENCBS466NCI/

value: Derived from ENCODE donor ENCDO868MLX; https://www.encodeproject.org/ENCDO868MLX/


title: DNase-seq from ecto neural progenitor cell (ENCLB182LEM)

description:
https://www.encodeproject.org/experiments/ENCSR360XIS/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR360XIS
assay title: DNase-seq
assembly: GRCh38
encode release date: 2018-02-23
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB182LEM
instrument models: Illumina NextSeq 500,Illumina HiSeq 4000

source_name: Homo sapiens female embryo (5 days) ecto neural progenitor in vitro differentiated cells originated from H9

value: ecto neural progenitor cell

value: in vitro differentiated cells

value: female

value: healthy

value: 5 day

value: Stephen Dalton

value: ENCBS752TEN at ENCODE; https://www.encodeproject.org/ENCBS752TEN/

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: DNase-seq from HFFc6 (ENCLB399PVN)

description:
https://www.encodeproject.org/experiments/ENCSR672EWY/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR672EWY
assay title: DNase-seq
assembly: hg19, GRCh38
encode release date: 2018-10-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB399PVN

value: cell line

value: Clonal line 6 derived from hTert immortalized HFF parental line

value: normal

value: newborn

value: 0 year

value: Job Dekker, UMass

value: Job Dekker

value: ENCBS647URW at ENCODE; https://www.encodeproject.org/ENCBS647URW/

value: Derived from ENCODE donor ENCDO737WWC; https://www.encodeproject.org/ENCDO737WWC/


title: TF ChIP-seq from HepG2 (ENCLB146JND)

description:
https://www.encodeproject.org/experiments/ENCSR549PAU/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR549PAU
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB146JND
fragmentation methods: sonication (generic)

value: male

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS406QST at ENCODE; https://www.encodeproject.org/ENCBS406QST/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: DNase-seq from central memory CD4-positive, alpha-beta T cell (ENCLB302OQH)

description:
https://www.encodeproject.org/experiments/ENCSR671ZRV/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR671ZRV
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-10-06
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB302OQH

source_name: Homo sapiens male adult (38 years) central memory CD4-positive, alpha-beta T primary cell

value: primary cell

value: adult

value: 38 year

value: John Stamatoyannopoulos, UW

value: AllCells

value: ENCBS362AFQ at ENCODE; https://www.encodeproject.org/ENCBS362AFQ/

value: Derived from ENCODE donor ENCDO923WRX; https://www.encodeproject.org/ENCDO923WRX/


title: TF ChIP-seq from HepG2 (ENCLB626KNC)

description:
https://www.encodeproject.org/experiments/ENCSR908HWZ/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR908HWZ
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB626KNC
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ATF2

value: cell line

value: ENCBS813XKM at ENCODE; https://www.encodeproject.org/ENCBS813XKM/


title: TF ChIP-seq from HepG2 (ENCLB693YTD)

description:
https://www.encodeproject.org/experiments/ENCSR908HWZ/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR908HWZ
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB693YTD
fragmentation methods: sonication (generic)

value: male

value: ENCBS083XFT at ENCODE; https://www.encodeproject.org/ENCBS083XFT/


title: ATAC-seq from gastroesophageal sphincter (ENCLB706KPG)

description:
https://www.encodeproject.org/experiments/ENCSR670REK/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human esophagogastric junction
experiment encode accession: ENCSR670REK
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2016-06-15
lab: Michael Snyder, Stanford
library encode accession: ENCLB706KPG
size range: 150-250

source_name: Homo sapiens female adult (53 years) gastroesophageal sphincter tissue

value: gastroesophageal sphincter

value: tissue

value: female

value: 53 year

value: Michael Snyder, Stanford

value: Derived from ENCODE donor ENCDO793LXB; https://www.encodeproject.org/ENCDO793LXB/

value: ENCBS185KVE at ENCODE; https://www.encodeproject.org/ENCBS185KVE/


title: TF ChIP-seq from HepG2 (ENCLB699OQJ)

description:
https://www.encodeproject.org/experiments/ENCSR359TWG/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR359TWG
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-14
lab: Richard Myers, HAIB
library encode accession: ENCLB699OQJ
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting HOXD1

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS754MJB at ENCODE; https://www.encodeproject.org/ENCBS754MJB/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: DNase-seq from head of caudate nucleus (ENCLB799IPV)

description:
https://www.encodeproject.org/experiments/ENCSR671YPX/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR671YPX
assay title: DNase-seq
assembly: GRCh38
encode release date: 2021-01-12
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB799IPV

source_name: Homo sapiens female adult (77 years) head of caudate nucleus tissue

value: head of caudate nucleus

value: adult

value: 77 year

value: John Stamatoyannopoulos, UW

value: Rush University

value: ENCBS499EOY at ENCODE; https://www.encodeproject.org/ENCBS499EOY/

value: Derived from ENCODE donor ENCDO628ASW; https://www.encodeproject.org/ENCDO628ASW/


title: TF ChIP-seq from HepG2 (ENCLB403BTB)

description:
https://www.encodeproject.org/experiments/ENCSR169JRW/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR169JRW
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB403BTB
fragmentation methods: sonication (generic)

value: cell line

value: male

value: ENCBS262BYN at ENCODE; https://www.encodeproject.org/ENCBS262BYN/


title: DNase-seq from posterior cingulate gyrus (ENCLB032JVM)

description:
https://www.encodeproject.org/experiments/ENCSR670MKJ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR670MKJ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-09-28
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB032JVM

source_name: Homo sapiens female adult (89 years) posterior cingulate gyrus tissue

value: posterior cingulate gyrus

value: tissue

value: female

value: 89 year

value: ENCBS538BDR at ENCODE; https://www.encodeproject.org/ENCBS538BDR/

value: Derived from ENCODE donor ENCDO707TUE; https://www.encodeproject.org/ENCDO707TUE/


title: DNase-seq from head of caudate nucleus (ENCLB176OZX)

description:
https://www.encodeproject.org/experiments/ENCSR663MNQ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR663MNQ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2021-01-11
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB176OZX

source_name: Homo sapiens female adult (90 or above years) head of caudate nucleus tissue with Alzheimer's disease

value: 90 year or above

value: ENCBS591PQX at ENCODE; https://www.encodeproject.org/ENCBS591PQX/

value: Derived from ENCODE donor ENCDO597SRH; https://www.encodeproject.org/ENCDO597SRH/


title: TF ChIP-seq from HepG2 (ENCLB413XXV)

description:
https://www.encodeproject.org/experiments/ENCSR359TWG/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR359TWG
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-14
lab: Richard Myers, HAIB
library encode accession: ENCLB413XXV
fragmentation methods: sonication (generic)

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS975ZJB at ENCODE; https://www.encodeproject.org/ENCBS975ZJB/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: TF ChIP-seq from HepG2 (ENCLB656KIS)

description:
https://www.encodeproject.org/experiments/ENCSR545ACM/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR545ACM
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-14
lab: Richard Myers, HAIB
library encode accession: ENCLB656KIS
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZNF549

value: cell line

value: male

value: ENCBS557DFO at ENCODE; https://www.encodeproject.org/ENCBS557DFO/


title: TF ChIP-seq from HepG2 (ENCLB191JSD)

description:
https://www.encodeproject.org/experiments/ENCSR545ACM/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR545ACM
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-14
lab: Richard Myers, HAIB
library encode accession: ENCLB191JSD
fragmentation methods: sonication (generic)

value: ENCBS035LGG at ENCODE; https://www.encodeproject.org/ENCBS035LGG/


title: TF ChIP-seq from HepG2 (ENCLB034LDW)

description:
https://www.encodeproject.org/experiments/ENCSR357YPP/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR357YPP
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB034LDW
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZNF124

value: ENCBS740SGB at ENCODE; https://www.encodeproject.org/ENCBS740SGB/


title: DNase-seq from CD8-positive, alpha-beta T cell (ENCLB758BUN)

description:
https://www.encodeproject.org/experiments/ENCSR662IRS/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR662IRS
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-10-05
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB758BUN

source_name: Homo sapiens female adult (33 years) CD8-positive, alpha-beta T primary cell

value: CD8-positive, alpha-beta T cell

value: primary cell

value: female

value: adult

value: 33 year

value: John Stamatoyannopoulos, UW

value: AllCells

value: ENCBS700IIU at ENCODE; https://www.encodeproject.org/ENCBS700IIU/

value: Derived from ENCODE donor ENCDO299FMV; https://www.encodeproject.org/ENCDO299FMV/


title: TF ChIP-seq from HepG2 (ENCLB009BLQ)

description:
https://www.encodeproject.org/experiments/ENCSR357YPP/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR357YPP
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB009BLQ
fragmentation methods: sonication (generic)

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS902PNO at ENCODE; https://www.encodeproject.org/ENCBS902PNO/


title: DNase-seq from dorsolateral prefrontal cortex (ENCLB220BWP)

description:
https://www.encodeproject.org/experiments/ENCSR661AMM/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR661AMM
assay title: DNase-seq
assembly: GRCh38
encode release date: 2021-01-11
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB220BWP

source_name: Homo sapiens female adult (83 years) dorsolateral prefrontal cortex tissue

value: dorsolateral prefrontal cortex

value: tissue

value: 83 year

value: Rush University

value: ENCBS999SER at ENCODE; https://www.encodeproject.org/ENCBS999SER/

value: Derived from ENCODE donor ENCDO448ZXP; https://www.encodeproject.org/ENCDO448ZXP/


title: DNase-seq from head of caudate nucleus (ENCLB682GVY)

description:
https://www.encodeproject.org/experiments/ENCSR659JPP/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR659JPP
assay title: DNase-seq
assembly: GRCh38
encode release date: 2021-01-12
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB682GVY

source_name: Homo sapiens male adult (84 years) head of caudate nucleus tissue with mild cognitive impairment

value: head of caudate nucleus

value: male

value: adult

value: 84 year

value: ENCBS852GIV at ENCODE; https://www.encodeproject.org/ENCBS852GIV/

value: Derived from ENCODE donor ENCDO020PXA; https://www.encodeproject.org/ENCDO020PXA/


title: TF ChIP-seq from HepG2 (ENCLB140BSL)

description:
https://www.encodeproject.org/experiments/ENCSR164YJZ/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR164YJZ
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB140BSL
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting NFKB2

value: cell line

value: hepatocellular carcinoma

value: child

value: ENCBS807SAH at ENCODE; https://www.encodeproject.org/ENCBS807SAH/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: DNase-seq from placenta (ENCLB810YOR)

description:
https://www.encodeproject.org/experiments/ENCSR656KLT/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR656KLT
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-09-28
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB810YOR

source_name: Homo sapiens female embryo placenta tissue

value: placenta

value: female

value: embryonic

value: unknown

value: John Stamatoyannopoulos, UW

value: John Stamatoyannopoulos

value: ENCBS390LUK at ENCODE; https://www.encodeproject.org/ENCBS390LUK/

value: Derived from ENCODE donor ENCDO353NXC; https://www.encodeproject.org/ENCDO353NXC/


title: TF ChIP-seq from HepG2 (ENCLB071TQV)

description:
https://www.encodeproject.org/experiments/ENCSR164YJZ/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR164YJZ
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB071TQV
fragmentation methods: sonication (generic)

value: male

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS984DYW at ENCODE; https://www.encodeproject.org/ENCBS984DYW/


title: DNase-seq from left lung (ENCLB198HMB)

description:
https://www.encodeproject.org/experiments/ENCSR658UBE/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR658UBE
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-09-28
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB198HMB

source_name: Homo sapiens female child (16 years) left lung tissue, preserved by flash-freezing

value: left lung

value: tissue

value: DM:no; HTN:no; CAD:no

value: 16 year

value: Michael Snyder, Stanford

value: Yiing Lin, MD, PhD

value: ENCBS790DUM at ENCODE; https://www.encodeproject.org/ENCBS790DUM/

value: Derived from ENCODE donor ENCDO575EGL; https://www.encodeproject.org/ENCDO575EGL/


title: TF ChIP-seq from HepG2 (ENCLB349OCJ)

description:
https://www.encodeproject.org/experiments/ENCSR543BNN/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR543BNN
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-14
lab: Richard Myers, HAIB
library encode accession: ENCLB349OCJ
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ISX

value: ISX

value: cell line

value: hepatocellular carcinoma

value: child

value: ENCBS792YUI at ENCODE; https://www.encodeproject.org/ENCBS792YUI/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: TF ChIP-seq from HepG2 (ENCLB621ZYP)

description:
https://www.encodeproject.org/experiments/ENCSR897LDT/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR897LDT
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-14
lab: Richard Myers, HAIB
library encode accession: ENCLB621ZYP
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting GATA2

value: male

value: 15 year

value: Richard Myers, HAIB

value: ENCBS042VAB at ENCODE; https://www.encodeproject.org/ENCBS042VAB/


title: DNase-seq from CD4-positive, alpha-beta T cell (ENCLB023ZXT)

description:
https://www.encodeproject.org/experiments/ENCSR654WXX/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR654WXX
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-10-05
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB023ZXT

source_name: Homo sapiens female adult (33 years) CD4-positive, alpha-beta T primary cell

value: CD4-positive, alpha-beta T cell

value: primary cell

value: female

value: adult

value: 33 year

value: John Stamatoyannopoulos, UW

value: AllCells

value: ENCBS212CDR at ENCODE; https://www.encodeproject.org/ENCBS212CDR/

value: Derived from ENCODE donor ENCDO299FMV; https://www.encodeproject.org/ENCDO299FMV/


title: DNase-seq from posterior cingulate gyrus (ENCLB482TLA)

description:
https://www.encodeproject.org/experiments/ENCSR654GSG/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR654GSG
assay title: DNase-seq
assembly: GRCh38
encode release date: 2021-01-12
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB482TLA

source_name: Homo sapiens male adult (90 or above years) posterior cingulate gyrus tissue with Alzheimer's disease

value: posterior cingulate gyrus

value: tissue

value: 90 year or above

value: Rush University

value: ENCBS250ROE at ENCODE; https://www.encodeproject.org/ENCBS250ROE/

value: Derived from ENCODE donor ENCDO197QVG; https://www.encodeproject.org/ENCDO197QVG/


title: TF ChIP-seq from HepG2 (ENCLB957LWO)

description:
https://www.encodeproject.org/experiments/ENCSR543BNN/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR543BNN
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-14
lab: Richard Myers, HAIB
library encode accession: ENCLB957LWO
fragmentation methods: sonication (generic)

value: ISX

value: cell line

value: male

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS266DAD at ENCODE; https://www.encodeproject.org/ENCBS266DAD/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: DNase-seq from upper lobe of left lung (ENCLB492ETX)

description:
https://www.encodeproject.org/experiments/ENCSR650FLQ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR650FLQ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2019-11-08
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB492ETX

source_name: Homo sapiens male adult (54 years) upper lobe of left lung tissue

value: upper lobe of left lung

value: adult

value: 54 year

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS525CSB at ENCODE; https://www.encodeproject.org/ENCBS525CSB/

value: Derived from ENCODE donor ENCDO451RUA; https://www.encodeproject.org/ENCDO451RUA/


title: DNase-seq from head of caudate nucleus (ENCLB128URU)

description:
https://www.encodeproject.org/experiments/ENCSR650TZF/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR650TZF
assay title: DNase-seq
assembly: GRCh38
encode release date: 2021-01-12
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB128URU

value: head of caudate nucleus

value: tissue

value: female

value: 90 year or above

value: Rush University

value: ENCBS347STK at ENCODE; https://www.encodeproject.org/ENCBS347STK/

value: Derived from ENCODE donor ENCDO473TSU; https://www.encodeproject.org/ENCDO473TSU/


title: DNase-seq from dorsolateral prefrontal cortex (ENCLB644AXD)

description:
https://www.encodeproject.org/experiments/ENCSR670BGI/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR670BGI
assay title: DNase-seq
assembly: GRCh38
encode release date: 2021-01-12
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB644AXD

source_name: Homo sapiens female adult (90 or above years) dorsolateral prefrontal cortex tissue

value: dorsolateral prefrontal cortex

value: ENCBS822WLR at ENCODE; https://www.encodeproject.org/ENCBS822WLR/

value: Derived from ENCODE donor ENCDO006DAA; https://www.encodeproject.org/ENCDO006DAA/


title: DNase-seq from CD8-positive, alpha-beta T cell (ENCLB449UZA)

description:
https://www.encodeproject.org/experiments/ENCSR649XRC/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR649XRC
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-10-05
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB449UZA

value: CD8-positive, alpha-beta T cell

value: primary cell

value: 33 year

value: AllCells

value: ENCBS541VIM at ENCODE; https://www.encodeproject.org/ENCBS541VIM/

value: Derived from ENCODE donor ENCDO299FMV; https://www.encodeproject.org/ENCDO299FMV/


title: DNase-seq from head of caudate nucleus (ENCLB977MTQ)

description:
https://www.encodeproject.org/experiments/ENCSR649MJI/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR649MJI
assay title: DNase-seq
assembly: GRCh38
encode release date: 2021-01-12
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB977MTQ

source_name: Homo sapiens female adult (90 or above years) head of caudate nucleus tissue with mild cognitive impairment

value: adult

value: John Stamatoyannopoulos, UW

value: ENCBS889UYE at ENCODE; https://www.encodeproject.org/ENCBS889UYE/

value: Derived from ENCODE donor ENCDO305GYI; https://www.encodeproject.org/ENCDO305GYI/


title: DNase-seq from head of caudate nucleus (ENCLB219UNP)

description:
https://www.encodeproject.org/experiments/ENCSR646JBR/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR646JBR
assay title: DNase-seq
assembly: GRCh38
encode release date: 2021-01-12
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB219UNP

value: head of caudate nucleus

value: tissue

value: female

value: 90 year or above

value: ENCBS352UYE at ENCODE; https://www.encodeproject.org/ENCBS352UYE/

value: Derived from ENCODE donor ENCDO730UYW; https://www.encodeproject.org/ENCDO730UYW/


title: TF ChIP-seq from K562 (ENCLB387RED)

description:
https://www.encodeproject.org/experiments/ENCSR163IUV/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on K562
experiment encode accession: ENCSR163IUV
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR589YUZ
encode release date: 2020-06-30
lab: Richard Myers, HAIB
library encode accession: ENCLB387RED
fragmentation methods: sonication (generic)

source_name: Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting MAZ

value: MAZ

value: cell line

value: chronic myelogenous leukemia (CML)

value: 53 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS938MUB at ENCODE; https://www.encodeproject.org/ENCBS938MUB/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: TF ChIP-seq from K562 (ENCLB489DTO)

description:
https://www.encodeproject.org/experiments/ENCSR163IUV/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on K562
experiment encode accession: ENCSR163IUV
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR589YUZ
encode release date: 2020-06-30
lab: Richard Myers, HAIB
library encode accession: ENCLB489DTO
fragmentation methods: sonication (generic)

value: adult

value: ENCBS235GKB at ENCODE; https://www.encodeproject.org/ENCBS235GKB/


title: DNase-seq from dorsolateral prefrontal cortex (ENCLB147VTB)

description:
https://www.encodeproject.org/experiments/ENCSR645HET/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR645HET
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-09-28
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB147VTB

source_name: Homo sapiens male adult (87 years) dorsolateral prefrontal cortex tissue

value: dorsolateral prefrontal cortex

value: male

value: 87 year

value: John Stamatoyannopoulos, UW

value: Rush University

value: ENCBS393GBB at ENCODE; https://www.encodeproject.org/ENCBS393GBB/

value: Derived from ENCODE donor ENCDO203ASI; https://www.encodeproject.org/ENCDO203ASI/


title: TF ChIP-seq from HepG2 (ENCLB483EHE)

description:
https://www.encodeproject.org/experiments/ENCSR532WFC/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR532WFC
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB483EHE
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZBTB14

value: hepatocellular carcinoma

value: child

value: 15 year

value: ENCBS529GCQ at ENCODE; https://www.encodeproject.org/ENCBS529GCQ/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: TF ChIP-seq from HepG2 (ENCLB308WGX)

description:
https://www.encodeproject.org/experiments/ENCSR892RCP/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR892RCP
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB308WGX
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting CBX5

value: cell line

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS491GEE at ENCODE; https://www.encodeproject.org/ENCBS491GEE/


title: TF ChIP-seq from HepG2 (ENCLB693NTB)

description:
https://www.encodeproject.org/experiments/ENCSR892RCP/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR892RCP
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB693NTB
fragmentation methods: sonication (generic)

value: ENCBS121WXB at ENCODE; https://www.encodeproject.org/ENCBS121WXB/


title: DNase-seq from T-cell (ENCLB994KGZ)

description:
https://www.encodeproject.org/experiments/ENCSR642DZF/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR642DZF
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-10-02
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB994KGZ

source_name: Homo sapiens female adult (33 years) T-cell primary cell

value: T-cell

value: primary cell

value: female

value: adult

value: 33 year

value: AllCells

value: ENCBS286GRO at ENCODE; https://www.encodeproject.org/ENCBS286GRO/

value: Derived from ENCODE donor ENCDO188AUM; https://www.encodeproject.org/ENCDO188AUM/


title: DNase-seq from head of caudate nucleus (ENCLB755VQK)

description:
https://www.encodeproject.org/experiments/ENCSR638PZJ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR638PZJ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2021-01-11
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB755VQK

value: head of caudate nucleus

value: tissue

value: 90 year or above

value: John Stamatoyannopoulos, UW

value: Rush University

value: ENCBS635OSE at ENCODE; https://www.encodeproject.org/ENCBS635OSE/

value: Derived from ENCODE donor ENCDO539ZHT; https://www.encodeproject.org/ENCDO539ZHT/


title: TF ChIP-seq from HepG2 (ENCLB061MWJ)

description:
https://www.encodeproject.org/experiments/ENCSR532WFC/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR532WFC
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB061MWJ
fragmentation methods: sonication (generic)

value: cell line

value: male

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS451IQY at ENCODE; https://www.encodeproject.org/ENCBS451IQY/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: TF ChIP-seq from A549 (ENCLB493YVM)

description:
https://www.encodeproject.org/experiments/ENCSR637RKG/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-PBX1 ChIP-seq on human A549
experiment encode accession: ENCSR637RKG
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR348EIP, ENCSR279OHT
encode release date: 2020-07-08
lab: Michael Snyder, Stanford
library encode accession: ENCLB493YVM
fragmentation methods: sonication (Bioruptor Pico)
size range: 250-450

source_name: Homo sapiens A549 cell line genetically modified (insertion) using CRISPR targeting PBX1

value: adult

value: 58 year

value: Michael Snyder, Stanford

value: Michael Snyder

value: ENCBS798OPX at ENCODE; https://www.encodeproject.org/ENCBS798OPX/

value: Derived from ENCODE donor ENCDO000AAZ; https://www.encodeproject.org/ENCDO000AAZ/


title: TF ChIP-seq from A549 (ENCLB780YLL)

description:
https://www.encodeproject.org/experiments/ENCSR637RKG/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-PBX1 ChIP-seq on human A549
experiment encode accession: ENCSR637RKG
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR348EIP, ENCSR279OHT
encode release date: 2020-07-08
lab: Michael Snyder, Stanford
library encode accession: ENCLB780YLL
fragmentation methods: sonication (Bioruptor Pico)
size range: 250-450

value: ENCBS774JUW at ENCODE; https://www.encodeproject.org/ENCBS774JUW/


title: TF ChIP-seq from HepG2 (ENCLB618HFC)

description:
https://www.encodeproject.org/experiments/ENCSR354FPG/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR354FPG
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB618HFC
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting STAT5B

value: ENCBS979MKG at ENCODE; https://www.encodeproject.org/ENCBS979MKG/


title: TF ChIP-seq from HepG2 (ENCLB563RDI)

description:
https://www.encodeproject.org/experiments/ENCSR354FPG/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR354FPG
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR239QGH
encode release date: 2020-07-09
lab: Richard Myers, HAIB
library encode accession: ENCLB563RDI
fragmentation methods: sonication (generic)

value: cell line

value: ENCBS693RGK at ENCODE; https://www.encodeproject.org/ENCBS693RGK/


title: DNase-seq from posterior cingulate gyrus (ENCLB259SEZ)

description:
https://www.encodeproject.org/experiments/ENCSR652IZW/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR652IZW
assay title: DNase-seq
assembly: GRCh38
encode release date: 2021-01-12
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB259SEZ

source_name: Homo sapiens female adult (90 or above years) posterior cingulate gyrus tissue

value: posterior cingulate gyrus

value: tissue

value: female

value: 90 year or above

value: John Stamatoyannopoulos, UW

value: Rush University

value: ENCBS444GRG at ENCODE; https://www.encodeproject.org/ENCBS444GRG/

value: Derived from ENCODE donor ENCDO218FFZ; https://www.encodeproject.org/ENCDO218FFZ/


title: DNase-seq from lower lobe of left lung (ENCLB920RQC)

description:
https://www.encodeproject.org/experiments/ENCSR632ONQ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR632ONQ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-09-28
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB920RQC

source_name: Homo sapiens female adult (59 years) lower lobe of left lung tissue, preserved by flash-freezing

value: lower lobe of left lung

value: DM:yes; HTN:yes; CAD:no

value: adult

value: 59 year

value: Yiing Lin, MD, PhD

value: ENCBS122TEV at ENCODE; https://www.encodeproject.org/ENCBS122TEV/

value: Derived from ENCODE donor ENCDO856ZOJ; https://www.encodeproject.org/ENCDO856ZOJ/


title: TF ChIP-seq from HepG2 (ENCLB157EHL)

description:
https://www.encodeproject.org/experiments/ENCSR897LDT/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR897LDT
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-14
lab: Richard Myers, HAIB
library encode accession: ENCLB157EHL
fragmentation methods: sonication (generic)

value: cell line

value: male

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS102DAZ at ENCODE; https://www.encodeproject.org/ENCBS102DAZ/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: DNase-seq from right cardiac atrium (ENCLB914KHH)

description:
https://www.encodeproject.org/experiments/ENCSR633DZW/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR633DZW
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-10-02
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB914KHH

source_name: Homo sapiens male adult (40 years) right cardiac atrium tissue, preserved by flash-freezing

value: right cardiac atrium

value: tissue

value: DM:no; HTN:yes; CAD:no

value: 40 year

value: Michael Snyder, Stanford

value: ENCBS788DRT at ENCODE; https://www.encodeproject.org/ENCBS788DRT/

value: Derived from ENCODE donor ENCDO392CRK; https://www.encodeproject.org/ENCDO392CRK/


title: TF ChIP-seq from K562 (ENCLB602CSV)

description:
https://www.encodeproject.org/experiments/ENCSR526HRN/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on K562
experiment encode accession: ENCSR526HRN
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR080NUS
encode release date: 2020-06-30
lab: Richard Myers, HAIB
library encode accession: ENCLB602CSV
fragmentation methods: sonication (generic)

source_name: Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting ZNF184

value: female

value: chronic myelogenous leukemia (CML)

value: adult

value: 53 year

value: ENCBS432LXY at ENCODE; https://www.encodeproject.org/ENCBS432LXY/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: DNase-seq from T-cell (ENCLB439WMI)

description:
https://www.encodeproject.org/experiments/ENCSR635URJ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR635URJ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-09-25
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB439WMI

source_name: Homo sapiens female adult (25 years) T-cell primary cell

value: T-cell

value: primary cell

value: 25 year

value: John Stamatoyannopoulos, UW

value: AllCells

value: ENCBS303EKF at ENCODE; https://www.encodeproject.org/ENCBS303EKF/

value: Derived from ENCODE donor ENCDO011KGM; https://www.encodeproject.org/ENCDO011KGM/


title: TF ChIP-seq from K562 (ENCLB185WUR)

description:
https://www.encodeproject.org/experiments/ENCSR526HRN/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on K562
experiment encode accession: ENCSR526HRN
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR080NUS
encode release date: 2020-06-30
lab: Richard Myers, HAIB
library encode accession: ENCLB185WUR
fragmentation methods: sonication (generic)

value: cell line

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS902SER at ENCODE; https://www.encodeproject.org/ENCBS902SER/


title: TF ChIP-seq from HepG2 (ENCLB564WBT)

description:
https://www.encodeproject.org/experiments/ENCSR886YJI/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR886YJI
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB564WBT
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting ZNF574

value: male

value: hepatocellular carcinoma

value: child

value: 15 year

value: ENCBS111CUE at ENCODE; https://www.encodeproject.org/ENCBS111CUE/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: DNase-seq from T-cell (ENCLB472EWS)

description:
https://www.encodeproject.org/experiments/ENCSR630XDN/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR630XDN
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-09-25
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB472EWS

source_name: Homo sapiens female adult (18 years) T-cell primary cell

value: T-cell

value: female

value: adult

value: 18 year

value: ENCBS080TMX at ENCODE; https://www.encodeproject.org/ENCBS080TMX/

value: Derived from ENCODE donor ENCDO012QTA; https://www.encodeproject.org/ENCDO012QTA/


title: TF ChIP-seq from HepG2 (ENCLB814ZMV)

description:
https://www.encodeproject.org/experiments/ENCSR886YJI/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR886YJI
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB814ZMV
fragmentation methods: sonication (generic)

value: ENCBS267PUV at ENCODE; https://www.encodeproject.org/ENCBS267PUV/


title: DNase-seq from head of caudate nucleus (ENCLB111ALP)

description:
https://www.encodeproject.org/experiments/ENCSR629TMA/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR629TMA
assay title: DNase-seq
assembly: GRCh38
encode release date: 2021-01-12
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB111ALP

source_name: Homo sapiens female adult (83 years) head of caudate nucleus tissue with mild cognitive impairment

value: head of caudate nucleus

value: tissue

value: 83 year

value: John Stamatoyannopoulos, UW

value: Rush University

value: ENCBS736JSB at ENCODE; https://www.encodeproject.org/ENCBS736JSB/

value: Derived from ENCODE donor ENCDO832DBZ; https://www.encodeproject.org/ENCDO832DBZ/


title: ATAC-seq from tibial artery (ENCLB494OMK)

description:
https://www.encodeproject.org/experiments/ENCSR630REB/
***************
biological replicate number: 1
technical replicate number: 1
description: ATAC-seq on human tibial artery
experiment encode accession: ENCSR630REB
assay title: ATAC-seq
assembly: GRCh38
encode release date: 2016-06-15
lab: Michael Snyder, Stanford
library encode accession: ENCLB494OMK
size range: 150-250

source_name: Homo sapiens male adult (54 years) tibial artery tissue

value: tibial artery

value: male

value: 54 year

value: Michael Snyder, Stanford

value: Kristin Ardlie

value: ENCBS923QEI at ENCODE; https://www.encodeproject.org/ENCBS923QEI/

value: Derived from ENCODE donor ENCDO451RUA; https://www.encodeproject.org/ENCDO451RUA/


title: DNase-seq from right lobe of liver (ENCLB670EXO)

description:
https://www.encodeproject.org/experiments/ENCSR628NEA/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR628NEA
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-10-02
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB670EXO

source_name: Homo sapiens male adult (45 years) right lobe of liver tissue, preserved by flash-freezing

value: right lobe of liver

value: DM:no; HTN:yes; CAD:no

value: adult

value: 45 year

value: Yiing Lin, MD, PhD

value: ENCBS067UVZ at ENCODE; https://www.encodeproject.org/ENCBS067UVZ/

value: Derived from ENCODE donor ENCDO757VPQ; https://www.encodeproject.org/ENCDO757VPQ/


title: TF ChIP-seq from HepG2 (ENCLB364JDK)

description:
https://www.encodeproject.org/experiments/ENCSR524RLU/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR524RLU
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB364JDK
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting RFXAP

value: RFXAP

value: cell line

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS065AJP at ENCODE; https://www.encodeproject.org/ENCBS065AJP/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/


title: TF ChIP-seq from HepG2 (ENCLB780YAV)

description:
https://www.encodeproject.org/experiments/ENCSR343RJR/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR343RJR
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB780YAV
fragmentation methods: sonication (generic)

source_name: Homo sapiens HepG2 cell line genetically modified (insertion) using CRISPR targeting BRCA1

value: male

value: ENCBS212YQB at ENCODE; https://www.encodeproject.org/ENCBS212YQB/


title: DNase-seq from T-cell (ENCLB580KLX)

description:
https://www.encodeproject.org/experiments/ENCSR627QIA/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR627QIA
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-09-25
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB580KLX

source_name: Homo sapiens male adult (28 years) T-cell primary cell

value: T-cell

value: primary cell

value: 28 year

value: John Stamatoyannopoulos, UW

value: AllCells

value: ENCBS413QSJ at ENCODE; https://www.encodeproject.org/ENCBS413QSJ/

value: Derived from ENCODE donor ENCDO648MMV; https://www.encodeproject.org/ENCDO648MMV/


title: TF ChIP-seq from HepG2 (ENCLB533VRW)

description:
https://www.encodeproject.org/experiments/ENCSR524RLU/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR524RLU
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB533VRW
fragmentation methods: sonication (generic)

value: RFXAP

value: cell line

value: ENCBS263SWH at ENCODE; https://www.encodeproject.org/ENCBS263SWH/


title: DNase-seq from CD8-positive, alpha-beta memory T cell (ENCLB750VLD)

description:
https://www.encodeproject.org/experiments/ENCSR625WLB/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR625WLB
assay title: DNase-seq
assembly: GRCh38
encode release date: 2020-10-05
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB750VLD

source_name: Homo sapiens male adult (30 years) CD8-positive, alpha-beta memory T primary cell

value: CD8-positive, alpha-beta memory T cell

value: adult

value: 30 year

value: ENCBS843LUR at ENCODE; https://www.encodeproject.org/ENCBS843LUR/

value: Derived from ENCODE donor ENCDO739OLY; https://www.encodeproject.org/ENCDO739OLY/


title: TF ChIP-seq from HepG2 (ENCLB799LZN)

description:
https://www.encodeproject.org/experiments/ENCSR343RJR/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-Seq on HepG2
experiment encode accession: ENCSR343RJR
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR020QUJ
encode release date: 2020-07-08
lab: Richard Myers, HAIB
library encode accession: ENCLB799LZN
fragmentation methods: sonication (generic)

value: male

value: hepatocellular carcinoma

value: child

value: 15 year

value: Richard Myers, HAIB

value: Richard Myers

value: ENCBS660PJD at ENCODE; https://www.encodeproject.org/ENCBS660PJD/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/