title: Mint-ChIP-seq from CD4-positive, CD25-positive, alpha-beta regulatory T cell (ENCLB068YJS)

description:
https://www.encodeproject.org/experiments/ENCSR069KMA/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 Mint-ChIP-seq on human CD4-positive, CD25-positive, alpha-beta regulatory T cell
experiment encode accession: ENCSR069KMA
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR156VQN
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB068YJS
fragmentation methods: none

value: Treg CD3+ CD4+ CD8- CD25+ CD127-

value: ENCBS681GZX at ENCODE; https://www.encodeproject.org/ENCBS681GZX/


title: Control ChIP-seq from K562 (ENCLB427ZSW)

status: Public on Jun 15 2021

type: SRA

city: Stanford

first: ENCODE

last: DCC

state: CA

address: 300 Pasteur Dr

country: USA

institute: ENCODE DCC

description:
https://www.encodeproject.org/experiments/ENCSR291BKA/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on human K562
experiment encode accession: ENCSR291BKA
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2021-05-18
lab: Michael Snyder, Stanford
library encode accession: ENCLB427ZSW
fragmentation methods: sonication (Bioruptor Pico)
size range: 250-450

library_source: genomic

data_processing: See GSM*_README.txt supplementary file linked below

molecule: genomic DNA

organism: Homo sapiens

source_name: Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting ZNF780A

tag: line

value: cell line

tag: biosample encode accession

tag: Sex

value: female

tag: health state

value: chronic myelogenous leukemia (CML)

tag: dev stage

value: adult

tag: age

value: 53 year

tag: lab

value: Michael Snyder, Stanford

tag: source

value: ATCC

tag: link

value: ENCBS734HLQ at ENCODE; https://www.encodeproject.org/ENCBS734HLQ/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: Mint-ChIP-seq from naive thymus-derived CD8-positive, alpha-beta T cell (ENCLB782GWV)

description:
https://www.encodeproject.org/experiments/ENCSR163GRD/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me1 Mint-ChIP-seq on human naive thymus-derived CD8-positive, alpha-beta T cell
experiment encode accession: ENCSR163GRD
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR371GOJ
encode release date: 2020-09-05
lab: Bradley Bernstein, Broad
library encode accession: ENCLB782GWV
fragmentation methods: none

source_name: Homo sapiens naive thymus-derived CD8-positive, alpha-beta T primary cell, preserved by cryopreservation

tag: antibody

value: primary cell

tag: description

value: CD8+ naive CD3+ CD4- CD8+ CD45RA+ CD45RO-

value: not collected

value: healthy

value: unknown

value: Bradley Bernstein, Broad

value: David Hafler

value: ENCBS044FCF at ENCODE; https://www.encodeproject.org/ENCBS044FCF/

value: Derived from ENCODE donor ENCDO976NED; https://www.encodeproject.org/ENCDO976NED/


title: Mint-ChIP-seq from CD14-positive monocyte (ENCLB029FFK)

description:
https://www.encodeproject.org/experiments/ENCSR799KCK/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K9me3 Mint-ChIP-seq on human CD14-positive monocyte
experiment encode accession: ENCSR799KCK
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR365IQY
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB029FFK
fragmentation methods: none
instrument models: Illumina NovaSeq 6000,Illumina NextSeq 500

source_name: Homo sapiens CD14-positive monocyte primary cell, preserved by cryopreservation

value: CD14-positive monocyte

value: Monocyte CD3- CD14+ CD19-

value: ENCBS747UFJ at ENCODE; https://www.encodeproject.org/ENCBS747UFJ/

value: Derived from ENCODE donor ENCDO922TOC; https://www.encodeproject.org/ENCDO922TOC/


title: Mint-ChIP-seq from activated CD8-positive, alpha-beta T cell (ENCLB379IQX)

description:
https://www.encodeproject.org/experiments/ENCSR174DBN/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac Mint-ChIP-seq of activated CD8-positive, alpha-beta T cell male adult (21 years) treated with anti-CD3 and anti-CD28 coated beads
experiment encode accession: ENCSR174DBN
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR741YCX
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB379IQX
fragmentation methods: none

source_name: Homo sapiens male adult (21 years) activated CD8-positive, alpha-beta T primary cell treated with anti-CD3 and anti-CD28 coated beads

value: male

value: adult

value: 21 year

value: Yijun Ruan, JAX

value: AllCells

tag: treatments

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS458XCC at ENCODE; https://www.encodeproject.org/ENCBS458XCC/

value: Derived from ENCODE donor ENCDO781BMZ; https://www.encodeproject.org/ENCDO781BMZ/


title: Control Mint-ChIP-seq from naive B cell (ENCLB409UHS)

description:
https://www.encodeproject.org/experiments/ENCSR163IRW/
***************
biological replicate number: 1
technical replicate number: 2
description: Control Mint-ChIP-seq of naive B cell originated from naive B cell
experiment encode accession: ENCSR163IRW
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2021-04-28
lab: Bradley Bernstein, Broad
library encode accession: ENCLB409UHS

source_name: Homo sapiens naive B primary cell with multiple sclerosis, preserved by cryopreservation

value: naive B cell

value: primary cell

value: B naive CD3- CD14- CD19+ CD27- IgD+

value: not collected

value: multiple sclerosis

value: unknown

value: ENCBS345AAH at ENCODE; https://www.encodeproject.org/ENCBS345AAH/

value: Derived from ENCODE donor ENCDO157PKH; https://www.encodeproject.org/ENCDO157PKH/


title: Control Mint-ChIP-seq from naive B cell (ENCLB016LIR)

description:
https://www.encodeproject.org/experiments/ENCSR163IRW/
***************
biological replicate number: 1
technical replicate number: 1
description: Control Mint-ChIP-seq of naive B cell originated from naive B cell
experiment encode accession: ENCSR163IRW
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2021-04-28
lab: Bradley Bernstein, Broad
library encode accession: ENCLB016LIR

value: Bradley Bernstein, Broad

value: David Hafler


title: Mint-ChIP-seq from naive thymus-derived CD8-positive, alpha-beta T cell (ENCLB984KCA)

description:
https://www.encodeproject.org/experiments/ENCSR163GRD/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 Mint-ChIP-seq on human naive thymus-derived CD8-positive, alpha-beta T cell
experiment encode accession: ENCSR163GRD
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR371GOJ
encode release date: 2020-09-05
lab: Bradley Bernstein, Broad
library encode accession: ENCLB984KCA
fragmentation methods: none

value: CD8+ naive CD3+ CD4- CD8+ CD45RA+ CD45RO-

value: healthy

value: ENCBS044FCF at ENCODE; https://www.encodeproject.org/ENCBS044FCF/

value: Derived from ENCODE donor ENCDO976NED; https://www.encodeproject.org/ENCDO976NED/


title: Control Mint-ChIP-seq from CD4-positive, CD25-positive, alpha-beta regulatory T cell (ENCLB318OJK)

description:
https://www.encodeproject.org/experiments/ENCSR156VQN/
***************
biological replicate number: 1
technical replicate number: 1
description: Control Mint-ChIP-seq on human CD4-positive, CD25-positive, alpha-beta regulatory T cell
experiment encode accession: ENCSR156VQN
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-08-04
lab: Bradley Bernstein, Broad
library encode accession: ENCLB318OJK

source_name: Homo sapiens CD4-positive, CD25-positive, alpha-beta regulatory T primary cell, preserved by cryopreservation

value: Treg CD3+ CD4+ CD8- CD25+ CD127-

value: ENCBS681GZX at ENCODE; https://www.encodeproject.org/ENCBS681GZX/


title: Mint-ChIP-seq from CD14-positive monocyte (ENCLB547EWF)

description:
https://www.encodeproject.org/experiments/ENCSR790KDX/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K36me3 Mint-ChIP-seq on human CD14-positive monocyte
experiment encode accession: ENCSR790KDX
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR365IQY
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB547EWF
fragmentation methods: none

value: CD14-positive monocyte

value: Monocyte CD3- CD14+ CD19-

value: ENCBS747UFJ at ENCODE; https://www.encodeproject.org/ENCBS747UFJ/

value: Derived from ENCODE donor ENCDO922TOC; https://www.encodeproject.org/ENCDO922TOC/


title: Mint-ChIP-seq from CD14-positive monocyte (ENCLB795FQR)

description:
https://www.encodeproject.org/experiments/ENCSR790KDX/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 Mint-ChIP-seq on human CD14-positive monocyte
experiment encode accession: ENCSR790KDX
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR365IQY
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB795FQR
fragmentation methods: none

value: primary cell

value: not collected


title: Control Mint-ChIP-seq from CD4-positive, CD25-positive, alpha-beta regulatory T cell (ENCLB865GUU)

description:
https://www.encodeproject.org/experiments/ENCSR156VQN/
***************
biological replicate number: 1
technical replicate number: 2
description: Control Mint-ChIP-seq on human CD4-positive, CD25-positive, alpha-beta regulatory T cell
experiment encode accession: ENCSR156VQN
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-08-04
lab: Bradley Bernstein, Broad
library encode accession: ENCLB865GUU

value: unknown


title: Mint-ChIP-seq from activated B cell (ENCLB776IRN)

description:
https://www.encodeproject.org/experiments/ENCSR156BXM/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me1 ChIP-seq on B cell male adult (22 years)
experiment encode accession: ENCSR156BXM
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR784EZW
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB776IRN
fragmentation methods: none

source_name: Homo sapiens male adult (22 years) activated B primary cell treated with 0.5 uM CpG ODN for 24 hours

value: activated B cell

value: male

value: adult

value: 22 year

value: Yijun Ruan, JAX

value: AllCells

value: treatment_term_name:CpG ODN; treatment_type:chemical; duration:24; duration_units:hour;

value: ENCBS860GIC at ENCODE; https://www.encodeproject.org/ENCBS860GIC/

value: Derived from ENCODE donor ENCDO383AQS; https://www.encodeproject.org/ENCDO383AQS/


title: Control ChIP-seq from K562 (ENCLB172WUY)

description:
https://www.encodeproject.org/experiments/ENCSR290RGE/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on human K562
experiment encode accession: ENCSR290RGE
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2020-06-30
lab: Michael Snyder, Stanford
library encode accession: ENCLB172WUY
fragmentation methods: sonication (Bioruptor Pico)
size range: 250-450

source_name: Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting ZFPM2

value: cell line

value: female

value: chronic myelogenous leukemia (CML)

value: 53 year

value: Michael Snyder, Stanford

value: ATCC

value: ENCBS548GBQ at ENCODE; https://www.encodeproject.org/ENCBS548GBQ/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: Mint-ChIP-seq from activated B cell (ENCLB287UUM)

description:
https://www.encodeproject.org/experiments/ENCSR156BXM/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 ChIP-seq on B cell male adult (22 years)
experiment encode accession: ENCSR156BXM
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR784EZW
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB287UUM
fragmentation methods: none

value: activated B cell

value: primary cell


title: Control ChIP-seq from K562 (ENCLB436TUI)

description:
https://www.encodeproject.org/experiments/ENCSR667UGH/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on human K562
experiment encode accession: ENCSR667UGH
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2021-03-26
lab: Michael Snyder, Stanford
library encode accession: ENCLB436TUI
fragmentation methods: sonication (Bioruptor Pico)
size range: 250-450

source_name: Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting ZNF511

value: adult

value: Kevin White

value: ENCBS328YAN at ENCODE; https://www.encodeproject.org/ENCBS328YAN/


title: Control Mint-ChIP-seq from activated CD4-positive, alpha-beta memory T cell (ENCLB840YJJ)

description:
https://www.encodeproject.org/experiments/ENCSR176HLK/
***************
biological replicate number: 1
technical replicate number: 1
description: Control Mint-ChIP-seq of activated CD4-positive, alpha-beta T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads
experiment encode accession: ENCSR176HLK
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2021-04-28
lab: Bradley Bernstein, Broad
library encode accession: ENCLB840YJJ

source_name: Homo sapiens male adult (43 years) activated CD4-positive, alpha-beta memory T primary cell treated with anti-CD3 and anti-CD28 coated beads

value: male

value: 43 year

value: Yijun Ruan, JAX

value: AllCells

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS514SPI at ENCODE; https://www.encodeproject.org/ENCBS514SPI/

value: Derived from ENCODE donor ENCDO791UJG; https://www.encodeproject.org/ENCDO791UJG/


title: Mint-ChIP-seq from CD14-positive monocyte (ENCLB343VHU)

description:
https://www.encodeproject.org/experiments/ENCSR787IEM/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K36me3 Mint-ChIP-seq on human CD14-positive monocyte
experiment encode accession: ENCSR787IEM
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR509FRR
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB343VHU
fragmentation methods: none
instrument models: Illumina NovaSeq 6000,Illumina NextSeq 500

source_name: Homo sapiens CD14-positive monocyte primary cell with multiple sclerosis, preserved by cryopreservation

value: CD14-positive monocyte

value: Monocyte CD3- CD14+ CD19-

value: not collected

value: multiple sclerosis

value: unknown

value: Bradley Bernstein, Broad

value: David Hafler

value: ENCBS080GJD at ENCODE; https://www.encodeproject.org/ENCBS080GJD/

value: Derived from ENCODE donor ENCDO187BUH; https://www.encodeproject.org/ENCDO187BUH/


title: Mint-ChIP-seq from IgD-negative memory B cell (ENCLB134ZVN)

description:
https://www.encodeproject.org/experiments/ENCSR238WFK/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR238WFK
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR354FME
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB134ZVN
fragmentation methods: none

source_name: Homo sapiens IgD-negative memory B primary cell with multiple sclerosis, preserved by cryopreservation

value: IgD-negative memory B cell

value: primary cell

value: B memory CD3- CD14- CD19+ CD27+ IgD-

value: ENCBS091EUT at ENCODE; https://www.encodeproject.org/ENCBS091EUT/


title: Control Mint-ChIP-seq from GM23338 (ENCLB954ERK)

description:
https://www.encodeproject.org/experiments/ENCSR787HYA/
***************
biological replicate number: 2
technical replicate number: 1
description: Control Mint-ChIP-seq on human GM23338
experiment encode accession: ENCSR787HYA
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-07-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB954ERK
instrument models: Illumina NovaSeq 6000,Illumina NextSeq 500

source_name: Homo sapiens GM23338 cell line

value: cell line

value: PGP-1 iPSCs provided by the George Church lab at HMS. purity 100%

value: male

value: adult

value: 53 year

value: Paola Arlotta

value: ENCBS299FWQ at ENCODE; https://www.encodeproject.org/ENCBS299FWQ/

value: Derived from ENCODE donor ENCDO336AAA; https://www.encodeproject.org/ENCDO336AAA/


title: Mint-ChIP-seq from IgD-negative memory B cell (ENCLB617FAO)

description:
https://www.encodeproject.org/experiments/ENCSR238WFK/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR238WFK
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR354FME
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB617FAO
fragmentation methods: none

value: not collected

value: multiple sclerosis

value: unknown


title: Mint-ChIP-seq from CD14-positive monocyte (ENCLB041WGQ)

description:
https://www.encodeproject.org/experiments/ENCSR787IEM/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 Mint-ChIP-seq on human CD14-positive monocyte
experiment encode accession: ENCSR787IEM
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR509FRR
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB041WGQ
fragmentation methods: none
instrument models: Illumina NovaSeq 6000,Illumina NextSeq 500

value: CD14-positive monocyte

value: Monocyte CD3- CD14+ CD19-

value: Bradley Bernstein, Broad

value: David Hafler

value: ENCBS080GJD at ENCODE; https://www.encodeproject.org/ENCBS080GJD/


title: Control Mint-ChIP-seq from GM23338 (ENCLB602APE)

description:
https://www.encodeproject.org/experiments/ENCSR787HYA/
***************
biological replicate number: 3
technical replicate number: 1
description: Control Mint-ChIP-seq on human GM23338
experiment encode accession: ENCSR787HYA
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-07-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB602APE

value: ENCBS695QJS at ENCODE; https://www.encodeproject.org/ENCBS695QJS/


title: Control ChIP-seq from SK-N-SH (ENCLB001QUC)

description:
https://www.encodeproject.org/experiments/ENCSR088LKY/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on human SK-N-SH
experiment encode accession: ENCSR088LKY
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2021-05-18
lab: Michael Snyder, Stanford
library encode accession: ENCLB001QUC
fragmentation methods: sonication (Bioruptor Pico)
size range: 250-450

source_name: Homo sapiens SK-N-SH cell line genetically modified (insertion) using CRISPR targeting TCF4 treated with 6 uM all-trans-retinoic acid for 48 hours

value: SK-N-SH

value: cell line

value: female

value: Metastatic neuroblastoma from bone marrow

value: child

value: 4 year

value: Michael Snyder, Stanford

value: Michael Snyder

value: treatment_term_id:CHEBI:15367; treatment_term_name:all-trans-retinoic acid; treatment_type:chemical; duration:48; duration_units:hour;

value: ENCBS964BEA at ENCODE; https://www.encodeproject.org/ENCBS964BEA/

value: Derived from ENCODE donor ENCDO000ABD; https://www.encodeproject.org/ENCDO000ABD/


title: Mint-ChIP-seq from CD4-positive, CD25-positive, alpha-beta regulatory T cell (ENCLB852LMT)

description:
https://www.encodeproject.org/experiments/ENCSR058IYH/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27me3 Mint-ChIP-seq on human CD4-positive, CD25-positive, alpha-beta regulatory T cell
experiment encode accession: ENCSR058IYH
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR310ZGH
encode release date: 2020-09-15
lab: Bradley Bernstein, Broad
library encode accession: ENCLB852LMT
fragmentation methods: none

value: primary cell

value: Treg CD3+ CD4+ CD8- CD25+ CD127-

value: not collected

value: healthy

value: unknown

value: ENCBS862LJK at ENCODE; https://www.encodeproject.org/ENCBS862LJK/

value: Derived from ENCODE donor ENCDO922TOC; https://www.encodeproject.org/ENCDO922TOC/


title: Mint-ChIP-seq from CD14-positive monocyte (ENCLB851TRX)

description:
https://www.encodeproject.org/experiments/ENCSR799KCK/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9me3 Mint-ChIP-seq on human CD14-positive monocyte
experiment encode accession: ENCSR799KCK
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR365IQY
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB851TRX
fragmentation methods: none
instrument models: Illumina NovaSeq 6000,Illumina NextSeq 500

value: CD14-positive monocyte

value: Monocyte CD3- CD14+ CD19-

value: Bradley Bernstein, Broad

value: David Hafler

value: ENCBS747UFJ at ENCODE; https://www.encodeproject.org/ENCBS747UFJ/


title: Control Mint-ChIP-seq from GM23338 (ENCLB296ZKN)

description:
https://www.encodeproject.org/experiments/ENCSR787HYA/
***************
biological replicate number: 2
technical replicate number: 2
description: Control Mint-ChIP-seq on human GM23338
experiment encode accession: ENCSR787HYA
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-07-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB296ZKN
instrument models: Illumina NovaSeq 6000,Illumina NextSeq 500

value: cell line

value: PGP-1 iPSCs provided by the George Church lab at HMS. purity 100%

value: male

value: adult

value: 53 year

value: Paola Arlotta

value: ENCBS299FWQ at ENCODE; https://www.encodeproject.org/ENCBS299FWQ/

value: Derived from ENCODE donor ENCDO336AAA; https://www.encodeproject.org/ENCDO336AAA/


title: Control Mint-ChIP-seq from GM23338 (ENCLB637RSD)

description:
https://www.encodeproject.org/experiments/ENCSR787HYA/
***************
biological replicate number: 3
technical replicate number: 2
description: Control Mint-ChIP-seq on human GM23338
experiment encode accession: ENCSR787HYA
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-07-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB637RSD

value: ENCBS695QJS at ENCODE; https://www.encodeproject.org/ENCBS695QJS/


title: Mint-ChIP-seq from CD8-positive, alpha-beta memory T cell (ENCLB498FWU)

description:
https://www.encodeproject.org/experiments/ENCSR787HDF/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac Mint-ChIP-seq on human CD8-positive, alpha-beta memory T cell
experiment encode accession: ENCSR787HDF
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR019FIH
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB498FWU
fragmentation methods: none
instrument models: Illumina NovaSeq 6000,Illumina HiSeq 2500

source_name: Homo sapiens CD8-positive, alpha-beta memory T primary cell with multiple sclerosis, preserved by cryopreservation

value: CD8-positive, alpha-beta memory T cell

value: primary cell

value: CD8+ memory CD3+ CD4- CD8+ CD45RA- CD45RO+

value: not collected

value: multiple sclerosis

value: unknown

value: ENCBS229YZM at ENCODE; https://www.encodeproject.org/ENCBS229YZM/

value: Derived from ENCODE donor ENCDO187BUH; https://www.encodeproject.org/ENCDO187BUH/


title: Control ChIP-seq from K562 (ENCLB799HBK)

description:
https://www.encodeproject.org/experiments/ENCSR276WUU/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on human K562
experiment encode accession: ENCSR276WUU
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2021-05-18
lab: Michael Snyder, Stanford
library encode accession: ENCLB799HBK
fragmentation methods: sonication (Bioruptor Pico)
size range: 250-450

source_name: Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting PHB

value: cell line

value: female

value: chronic myelogenous leukemia (CML)

value: Michael Snyder, Stanford

value: ATCC

value: ENCBS186JDT at ENCODE; https://www.encodeproject.org/ENCBS186JDT/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: Mint-ChIP-seq from CD8-positive, alpha-beta memory T cell (ENCLB518ALA)

description:
https://www.encodeproject.org/experiments/ENCSR787HDF/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac Mint-ChIP-seq on human CD8-positive, alpha-beta memory T cell
experiment encode accession: ENCSR787HDF
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR019FIH
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB518ALA
fragmentation methods: none
instrument models: Illumina NovaSeq 6000,Illumina HiSeq 2500

value: Bradley Bernstein, Broad

value: David Hafler


title: Mint-ChIP-seq from CD4-positive, CD25-positive, alpha-beta regulatory T cell (ENCLB317VSE)

description:
https://www.encodeproject.org/experiments/ENCSR058IYH/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 Mint-ChIP-seq on human CD4-positive, CD25-positive, alpha-beta regulatory T cell
experiment encode accession: ENCSR058IYH
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR310ZGH
encode release date: 2020-09-15
lab: Bradley Bernstein, Broad
library encode accession: ENCLB317VSE
fragmentation methods: none

value: Treg CD3+ CD4+ CD8- CD25+ CD127-

value: healthy

value: ENCBS862LJK at ENCODE; https://www.encodeproject.org/ENCBS862LJK/

value: Derived from ENCODE donor ENCDO922TOC; https://www.encodeproject.org/ENCDO922TOC/


title: Mint-ChIP-seq from CD8-positive, alpha-beta memory T cell (ENCLB113XCC)

description:
https://www.encodeproject.org/experiments/ENCSR650DHK/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me1 Mint-ChIP-seq on human CD8-positive, alpha-beta memory T cell
experiment encode accession: ENCSR650DHK
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR996DNY
encode release date: 2020-09-05
lab: Bradley Bernstein, Broad
library encode accession: ENCLB113XCC
fragmentation methods: none
instrument models: Illumina NovaSeq 6000,Illumina HiSeq 2500

source_name: Homo sapiens CD8-positive, alpha-beta memory T primary cell, preserved by cryopreservation

value: CD8-positive, alpha-beta memory T cell

value: primary cell

value: CD8+ memory CD3+ CD4- CD8+ CD45RA- CD45RO+

value: not collected

value: ENCBS274KKV at ENCODE; https://www.encodeproject.org/ENCBS274KKV/


title: Control ChIP-seq from K562 (ENCLB733GUC)

description:
https://www.encodeproject.org/experiments/ENCSR192TOE/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on human K562
experiment encode accession: ENCSR192TOE
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2021-05-18
lab: Michael Snyder, Stanford
library encode accession: ENCLB733GUC
fragmentation methods: sonication (Bioruptor Pico)
size range: 250-450

source_name: Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting E4F1

value: cell line

value: female

value: adult

value: 53 year

value: ENCBS824KSK at ENCODE; https://www.encodeproject.org/ENCBS824KSK/


title: Mint-ChIP-seq from naive thymus-derived CD8-positive, alpha-beta T cell (ENCLB596CSE)

description:
https://www.encodeproject.org/experiments/ENCSR052KGC/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac Mint-ChIP-seq on human naive thymus-derived CD8-positive, alpha-beta T cell
experiment encode accession: ENCSR052KGC
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR371GOJ
encode release date: 2020-09-05
lab: Bradley Bernstein, Broad
library encode accession: ENCLB596CSE
fragmentation methods: none

source_name: Homo sapiens naive thymus-derived CD8-positive, alpha-beta T primary cell, preserved by cryopreservation

value: CD8+ naive CD3+ CD4- CD8+ CD45RA+ CD45RO-

value: unknown

value: ENCBS044FCF at ENCODE; https://www.encodeproject.org/ENCBS044FCF/

value: Derived from ENCODE donor ENCDO976NED; https://www.encodeproject.org/ENCDO976NED/


title: Control Mint-ChIP-seq from activated CD4 positive, naive alpha-beta T cell (ENCLB059ZMB)

description:
https://www.encodeproject.org/experiments/ENCSR053AWV/
***************
biological replicate number: 1
technical replicate number: 1
description: Control Mint-ChIP-seq of activated CD4-positive, alpha-beta T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads
experiment encode accession: ENCSR053AWV
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2021-04-28
lab: Bradley Bernstein, Broad
library encode accession: ENCLB059ZMB

source_name: Homo sapiens male adult (43 years) activated CD4 positive, naive alpha-beta T primary cell treated with anti-CD3 and anti-CD28 coated beads

value: male

value: 43 year

value: Yijun Ruan, JAX

value: AllCells

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS212SYV at ENCODE; https://www.encodeproject.org/ENCBS212SYV/

value: Derived from ENCODE donor ENCDO791UJG; https://www.encodeproject.org/ENCDO791UJG/


title: Mint-ChIP-seq from naive thymus-derived CD8-positive, alpha-beta T cell (ENCLB595IBF)

description:
https://www.encodeproject.org/experiments/ENCSR052KGC/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac Mint-ChIP-seq on human naive thymus-derived CD8-positive, alpha-beta T cell
experiment encode accession: ENCSR052KGC
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR371GOJ
encode release date: 2020-09-05
lab: Bradley Bernstein, Broad
library encode accession: ENCLB595IBF
fragmentation methods: none

value: primary cell

value: not collected

value: healthy

value: Bradley Bernstein, Broad

value: David Hafler


title: Control Mint-ChIP-seq from B cell (ENCLB079XDM)

description:
https://www.encodeproject.org/experiments/ENCSR051DHR/
***************
biological replicate number: 1
technical replicate number: 1
description: Control Mint-ChIP-seq of B cell male adult (22 years)
experiment encode accession: ENCSR051DHR
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2021-04-28
lab: Bradley Bernstein, Broad
library encode accession: ENCLB079XDM

source_name: Homo sapiens male adult (22 years) B primary cell

value: B cell

value: adult

value: 22 year

value: ENCBS852RUN at ENCODE; https://www.encodeproject.org/ENCBS852RUN/

value: Derived from ENCODE donor ENCDO383AQS; https://www.encodeproject.org/ENCDO383AQS/


title: Control Mint-ChIP-seq from B cell (ENCLB346PQL)

description:
https://www.encodeproject.org/experiments/ENCSR051DHR/
***************
biological replicate number: 1
technical replicate number: 2
description: Control Mint-ChIP-seq of B cell male adult (22 years)
experiment encode accession: ENCSR051DHR
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2021-04-28
lab: Bradley Bernstein, Broad
library encode accession: ENCLB346PQL

value: male


title: Control Mint-ChIP-seq from activated CD4 positive, naive alpha-beta T cell (ENCLB814OLO)

description:
https://www.encodeproject.org/experiments/ENCSR053AWV/
***************
biological replicate number: 1
technical replicate number: 2
description: Control Mint-ChIP-seq of activated CD4-positive, alpha-beta T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads
experiment encode accession: ENCSR053AWV
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2021-04-28
lab: Bradley Bernstein, Broad
library encode accession: ENCLB814OLO

value: 43 year


title: Control Mint-ChIP-seq from CD8-positive, alpha-beta memory T cell (ENCLB936RUH)

description:
https://www.encodeproject.org/experiments/ENCSR150CMT/
***************
biological replicate number: 1
technical replicate number: 1
description: Control Mint-ChIP-seq on human CD8-positive, alpha-beta memory T cell
experiment encode accession: ENCSR150CMT
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-08-04
lab: Bradley Bernstein, Broad
library encode accession: ENCLB936RUH
instrument models: Illumina NextSeq 500,Illumina HiSeq 2500

source_name: Homo sapiens CD8-positive, alpha-beta memory T primary cell

value: CD8-positive, alpha-beta memory T cell

value: supplied by Hafler lab as part of Encode4 project starting July2017

value: unknown

value: ENCBS144FNF at ENCODE; https://www.encodeproject.org/ENCBS144FNF/

value: Derived from ENCODE donor ENCDO258PRN; https://www.encodeproject.org/ENCDO258PRN/


title: Mint-ChIP-seq from naive thymus-derived CD8-positive, alpha-beta T cell (ENCLB956WFA)

description:
https://www.encodeproject.org/experiments/ENCSR148ICM/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9me3 Mint-ChIP-seq on human naive thymus-derived CD8-positive, alpha-beta T cell
experiment encode accession: ENCSR148ICM
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR371GOJ
encode release date: 2020-09-05
lab: Bradley Bernstein, Broad
library encode accession: ENCLB956WFA
fragmentation methods: none

value: primary cell

value: CD8+ naive CD3+ CD4- CD8+ CD45RA+ CD45RO-

value: ENCBS044FCF at ENCODE; https://www.encodeproject.org/ENCBS044FCF/

value: Derived from ENCODE donor ENCDO976NED; https://www.encodeproject.org/ENCDO976NED/


title: Control Mint-ChIP-seq from endothelial cell (ENCLB042PFX)

description:
https://www.encodeproject.org/experiments/ENCSR759ZAX/
***************
biological replicate number: 1
technical replicate number: 2
description: Control Mint-ChIP-seq on human PGP1 derived endothelial cell
experiment encode accession: ENCSR759ZAX
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-08-04
lab: Bradley Bernstein, Broad
library encode accession: ENCLB042PFX
instrument models: Illumina NovaSeq 6000,Illumina NextSeq 500

source_name: Homo sapiens male adult (53 years) endothelial in vitro differentiated cells, preserved by cryopreservation

value: endothelial cell

value: in vitro differentiated cells

value: PGP1 derived endothelial cells

value: 53 year

value: Bradley Bernstein, Broad

value: George Church

value: ENCBS239VAD at ENCODE; https://www.encodeproject.org/ENCBS239VAD/

value: Derived from ENCODE donor ENCDO336AAA; https://www.encodeproject.org/ENCDO336AAA/


title: Mint-ChIP-seq from naive thymus-derived CD8-positive, alpha-beta T cell (ENCLB923CYW)

description:
https://www.encodeproject.org/experiments/ENCSR148ICM/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K9me3 Mint-ChIP-seq on human naive thymus-derived CD8-positive, alpha-beta T cell
experiment encode accession: ENCSR148ICM
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR371GOJ
encode release date: 2020-09-05
lab: Bradley Bernstein, Broad
library encode accession: ENCLB923CYW
fragmentation methods: none

value: not collected

value: healthy

value: David Hafler


title: Mint-ChIP-seq from activated CD4 positive, naive alpha-beta T cell (ENCLB216SQY)

description:
https://www.encodeproject.org/experiments/ENCSR047QYF/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR047QYF
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR053AWV
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB216SQY
fragmentation methods: none

value: male

value: adult

value: 43 year

value: Yijun Ruan, JAX

value: AllCells

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS212SYV at ENCODE; https://www.encodeproject.org/ENCBS212SYV/

value: Derived from ENCODE donor ENCDO791UJG; https://www.encodeproject.org/ENCDO791UJG/


title: Mint-ChIP-seq from CD8-positive, alpha-beta memory T cell (ENCLB403ZVM)

description:
https://www.encodeproject.org/experiments/ENCSR757FGN/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K36me3 Mint-ChIP-seq on human CD8-positive, alpha-beta memory T cell
experiment encode accession: ENCSR757FGN
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR019FIH
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB403ZVM
fragmentation methods: none
instrument models: Illumina NovaSeq 6000,Illumina HiSeq 2500

value: CD8-positive, alpha-beta memory T cell

value: primary cell

value: CD8+ memory CD3+ CD4- CD8+ CD45RA- CD45RO+

value: multiple sclerosis

value: unknown

value: ENCBS229YZM at ENCODE; https://www.encodeproject.org/ENCBS229YZM/

value: Derived from ENCODE donor ENCDO187BUH; https://www.encodeproject.org/ENCDO187BUH/


title: Mint-ChIP-seq from activated CD4 positive, naive alpha-beta T cell (ENCLB897AVJ)

description:
https://www.encodeproject.org/experiments/ENCSR047QYF/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR047QYF
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR053AWV
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB897AVJ
fragmentation methods: none


title: Mint-ChIP-seq from activated CD4-positive, alpha-beta T cell (ENCLB212HNP)

description:
https://www.encodeproject.org/experiments/ENCSR046DRK/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac Mint-ChIP-seq of activated CD4-positive, alpha-beta T cell male adult (20 years) treated with 10 ng
experiment encode accession: ENCSR046DRK
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR779CPT
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB212HNP
fragmentation methods: none

source_name: Homo sapiens male adult (20 years) activated CD4-positive, alpha-beta T primary cell treated with 10 ng/mL Interleukin-2 , anti-CD3 and anti-CD28 coated beads

value: 20 year

value: treatment_term_id:UniProtKB:P60568; treatment_term_name:Interleukin-2; treatment_type:protein; treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS736STX at ENCODE; https://www.encodeproject.org/ENCBS736STX/

value: Derived from ENCODE donor ENCDO394DKX; https://www.encodeproject.org/ENCDO394DKX/


title: Mint-ChIP-seq from activated CD4-positive, alpha-beta T cell (ENCLB870UGM)

description:
https://www.encodeproject.org/experiments/ENCSR046DRK/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac Mint-ChIP-seq of activated CD4-positive, alpha-beta T cell male adult (20 years) treated with 10 ng
experiment encode accession: ENCSR046DRK
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR779CPT
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB870UGM
fragmentation methods: none

value: male

value: adult


title: Mint-ChIP-seq from activated CD4-positive, alpha-beta memory T cell (ENCLB999SKW)

description:
https://www.encodeproject.org/experiments/ENCSR232VZV/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac Mint-ChIP-seq of activated CD4-positive, alpha-beta T cell male adult (43 years) treated with 10 ng
experiment encode accession: ENCSR232VZV
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR201SEO
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB999SKW
fragmentation methods: none

source_name: Homo sapiens male adult (43 years) activated CD4-positive, alpha-beta memory T primary cell treated with 10 ng/mL Interleukin-2 , anti-CD3 and anti-CD28 coated beads

value: 43 year

value: Yijun Ruan, JAX

value: AllCells

value: ENCBS677HEG at ENCODE; https://www.encodeproject.org/ENCBS677HEG/


title: Mint-ChIP-seq from activated CD4-positive, alpha-beta memory T cell (ENCLB831DXO)

description:
https://www.encodeproject.org/experiments/ENCSR232VZV/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac Mint-ChIP-seq of activated CD4-positive, alpha-beta T cell male adult (43 years) treated with 10 ng
experiment encode accession: ENCSR232VZV
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR201SEO
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB831DXO
fragmentation methods: none

value: Derived from ENCODE donor ENCDO791UJG; https://www.encodeproject.org/ENCDO791UJG/


title: Mint-ChIP-seq from IgD-negative memory B cell (ENCLB109SRP)

description:
https://www.encodeproject.org/experiments/ENCSR147BRW/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR147BRW
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR519VQC
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB109SRP
fragmentation methods: none

source_name: Homo sapiens IgD-negative memory B primary cell, preserved by cryopreservation

value: IgD-negative memory B cell

value: primary cell

value: B memory CD3- CD14- CD19+ CD27+ IgD-

value: not collected

value: healthy

value: Bradley Bernstein, Broad

value: David Hafler

value: ENCBS318ZNB at ENCODE; https://www.encodeproject.org/ENCBS318ZNB/

value: Derived from ENCODE donor ENCDO922TOC; https://www.encodeproject.org/ENCDO922TOC/


title: Mint-ChIP-seq from naive thymus-derived CD4-positive, alpha-beta T cell (ENCLB222ZOR)

description:
https://www.encodeproject.org/experiments/ENCSR142VGG/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac Mint-ChIP-seq on human naive thymus-derived CD4-positive, alpha-beta T cell
experiment encode accession: ENCSR142VGG
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR521SOP
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB222ZOR
fragmentation methods: none
instrument models: Illumina NextSeq 500,Illumina NovaSeq 6000,Illumina HiSeq 2500

source_name: Homo sapiens naive thymus-derived CD4-positive, alpha-beta T primary cell, preserved by cryopreservation

value: CD4+ naive CD3+ CD4+ CD8- CD45RA+ CD45RO- nonTreg

value: unknown

value: ENCBS892TKW at ENCODE; https://www.encodeproject.org/ENCBS892TKW/


title: Mint-ChIP-seq from naive B cell (ENCLB018JGK)

description:
https://www.encodeproject.org/experiments/ENCSR141MKN/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac Mint-ChIP-seq on human naive B cell
experiment encode accession: ENCSR141MKN
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR119CTT
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB018JGK
fragmentation methods: none

source_name: Homo sapiens naive B primary cell, preserved by cryopreservation

value: naive B cell

value: B naive CD3- CD14- CD19+ CD27- IgD+

value: ENCBS182GUX at ENCODE; https://www.encodeproject.org/ENCBS182GUX/


title: Mint-ChIP-seq from naive B cell (ENCLB364QTG)

description:
https://www.encodeproject.org/experiments/ENCSR141MKN/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac Mint-ChIP-seq on human naive B cell
experiment encode accession: ENCSR141MKN
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR119CTT
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB364QTG
fragmentation methods: none


title: Mint-ChIP-seq from IgD-negative memory B cell (ENCLB542ZTH)

description:
https://www.encodeproject.org/experiments/ENCSR147BRW/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR147BRW
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR519VQC
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB542ZTH
fragmentation methods: none


title: Control Mint-ChIP-seq from CD8-positive, alpha-beta memory T cell (ENCLB062ARJ)

description:
https://www.encodeproject.org/experiments/ENCSR231SVU/
***************
biological replicate number: 1
technical replicate number: 1
description: Control Mint-ChIP-seq of CD8-positive, alpha-beta memory T cell originated from CD8-positive, alpha-beta memory T cell
experiment encode accession: ENCSR231SVU
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2021-04-28
lab: Bradley Bernstein, Broad
library encode accession: ENCLB062ARJ

value: CD8-positive, alpha-beta memory T cell

value: CD8+ memory CD3+ CD4- CD8+ CD45RA- CD45RO+

value: multiple sclerosis

value: ENCBS347VRW at ENCODE; https://www.encodeproject.org/ENCBS347VRW/

value: Derived from ENCODE donor ENCDO157PKH; https://www.encodeproject.org/ENCDO157PKH/


title: Control Mint-ChIP-seq from CD8-positive, alpha-beta memory T cell (ENCLB503RVB)

description:
https://www.encodeproject.org/experiments/ENCSR231SVU/
***************
biological replicate number: 1
technical replicate number: 2
description: Control Mint-ChIP-seq of CD8-positive, alpha-beta memory T cell originated from CD8-positive, alpha-beta memory T cell
experiment encode accession: ENCSR231SVU
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2021-04-28
lab: Bradley Bernstein, Broad
library encode accession: ENCLB503RVB

value: primary cell

value: not collected


title: Mint-ChIP-seq from endothelial cell (ENCLB437UZA)

description:
https://www.encodeproject.org/experiments/ENCSR622UQY/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me1 Mint-ChIP-seq on human PGP1 derived endothelial cell
experiment encode accession: ENCSR622UQY
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR759ZAX
encode release date: 2021-05-18
lab: Bradley Bernstein, Broad
library encode accession: ENCLB437UZA
fragmentation methods: none

value: endothelial cell

value: in vitro differentiated cells

value: PGP1 derived endothelial cells

value: male

value: adult

value: 53 year

value: Bradley Bernstein, Broad

value: George Church

value: ENCBS239VAD at ENCODE; https://www.encodeproject.org/ENCBS239VAD/

value: Derived from ENCODE donor ENCDO336AAA; https://www.encodeproject.org/ENCDO336AAA/


title: Control Mint-ChIP-seq from endothelial cell (ENCLB848NJO)

description:
https://www.encodeproject.org/experiments/ENCSR759ZAX/
***************
biological replicate number: 1
technical replicate number: 1
description: Control Mint-ChIP-seq on human PGP1 derived endothelial cell
experiment encode accession: ENCSR759ZAX
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-08-04
lab: Bradley Bernstein, Broad
library encode accession: ENCLB848NJO
instrument models: Illumina NovaSeq 6000,Illumina NextSeq 500


title: Mint-ChIP-seq from immature natural killer cell (ENCLB486VYJ)

description:
https://www.encodeproject.org/experiments/ENCSR225GZF/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 Mint-ChIP-seq on human immature natural killer cell
experiment encode accession: ENCSR225GZF
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR314IFB
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB486VYJ
fragmentation methods: none
instrument models: Illumina NextSeq 500,Illumina NovaSeq 6000,Illumina HiSeq 2500

source_name: Homo sapiens immature natural killer primary cell

value: immature natural killer cell

value: supplied by Hafler lab as part of Encode4 project starting July2017

value: healthy

value: unknown

value: David Hafler

value: ENCBS497KWS at ENCODE; https://www.encodeproject.org/ENCBS497KWS/

value: Derived from ENCODE donor ENCDO922TOC; https://www.encodeproject.org/ENCDO922TOC/


title: Mint-ChIP-seq from endothelial cell (ENCLB046DPO)

description:
https://www.encodeproject.org/experiments/ENCSR616PRQ/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac Mint-ChIP-seq on human PGP1 derived endothelial cell
experiment encode accession: ENCSR616PRQ
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR759ZAX
encode release date: 2021-05-18
lab: Bradley Bernstein, Broad
library encode accession: ENCLB046DPO
fragmentation methods: none
instrument models: Illumina NovaSeq 6000,Illumina NextSeq 500

value: endothelial cell


title: Control ChIP-seq from K562 (ENCLB368ZAK)

description:
https://www.encodeproject.org/experiments/ENCSR236QAK/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on human K562
experiment encode accession: ENCSR236QAK
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2020-08-03
lab: Michael Snyder, Stanford
library encode accession: ENCLB368ZAK
fragmentation methods: sonication (Bioruptor Pico)
size range: 250-450

source_name: Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting ZNF398

value: cell line

value: female

value: chronic myelogenous leukemia (CML)

value: Michael Snyder, Stanford

value: Kevin White

value: ENCBS819HIK at ENCODE; https://www.encodeproject.org/ENCBS819HIK/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: Mint-ChIP-seq from immature natural killer cell (ENCLB331KJS)

description:
https://www.encodeproject.org/experiments/ENCSR225GZF/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27me3 Mint-ChIP-seq on human immature natural killer cell
experiment encode accession: ENCSR225GZF
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR314IFB
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB331KJS
fragmentation methods: none
instrument models: Illumina NextSeq 500,Illumina NovaSeq 6000,Illumina HiSeq 2500

value: primary cell

value: not collected

value: Bradley Bernstein, Broad


title: Mint-ChIP-seq from endothelial cell (ENCLB469OGF)

description:
https://www.encodeproject.org/experiments/ENCSR616PRQ/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac Mint-ChIP-seq on human PGP1 derived endothelial cell
experiment encode accession: ENCSR616PRQ
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR759ZAX
encode release date: 2021-05-18
lab: Bradley Bernstein, Broad
library encode accession: ENCLB469OGF
fragmentation methods: none
instrument models: Illumina NovaSeq 6000,Illumina NextSeq 500

value: in vitro differentiated cells

value: PGP1 derived endothelial cells

value: male

value: adult

value: 53 year

value: George Church

value: ENCBS239VAD at ENCODE; https://www.encodeproject.org/ENCBS239VAD/

value: Derived from ENCODE donor ENCDO336AAA; https://www.encodeproject.org/ENCDO336AAA/


title: Mint-ChIP-seq from T-cell (ENCLB146ILR)

description:
https://www.encodeproject.org/experiments/ENCSR220CDK/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 ChIP-seq on T-cell male adult (38 years)
experiment encode accession: ENCSR220CDK
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR203XDG
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB146ILR
fragmentation methods: none

source_name: Homo sapiens male adult (38 years) T-cell primary cell

value: T-cell

value: CD3+ unactivated cells from Stam Lab at Altius.

value: 38 year

value: John Stamatoyannopoulos

value: ENCBS059XUY at ENCODE; https://www.encodeproject.org/ENCBS059XUY/

value: Derived from ENCODE donor ENCDO923WRX; https://www.encodeproject.org/ENCDO923WRX/


title: Mint-ChIP-seq from activated CD4 positive, naive alpha-beta T cell (ENCLB827CNI)

description:
https://www.encodeproject.org/experiments/ENCSR227HTN/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR227HTN
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR764JRB
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB827CNI
fragmentation methods: none

source_name: Homo sapiens male adult (43 years) activated CD4 positive, naive alpha-beta T primary cell treated with 10 ng/mL Interleukin-2 , anti-CD3 and anti-CD28 coated beads

value: primary cell

value: 43 year

value: Yijun Ruan, JAX

value: AllCells

value: treatment_term_id:UniProtKB:P60568; treatment_term_name:Interleukin-2; treatment_type:protein; treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS377CVF at ENCODE; https://www.encodeproject.org/ENCBS377CVF/

value: Derived from ENCODE donor ENCDO791UJG; https://www.encodeproject.org/ENCDO791UJG/


title: Mint-ChIP-seq from activated CD4 positive, naive alpha-beta T cell (ENCLB452JMQ)

description:
https://www.encodeproject.org/experiments/ENCSR227HTN/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR227HTN
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR764JRB
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB452JMQ
fragmentation methods: none

value: male

value: adult


title: Mint-ChIP-seq from naive thymus-derived CD4-positive, alpha-beta T cell (ENCLB508UUW)

description:
https://www.encodeproject.org/experiments/ENCSR142VGG/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac Mint-ChIP-seq on human naive thymus-derived CD4-positive, alpha-beta T cell
experiment encode accession: ENCSR142VGG
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR521SOP
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB508UUW
fragmentation methods: none
instrument models: Illumina NextSeq 500,Illumina NovaSeq 6000,Illumina HiSeq 2500

value: CD4+ naive CD3+ CD4+ CD8- CD45RA+ CD45RO- nonTreg

value: not collected

value: healthy

value: unknown

value: Bradley Bernstein, Broad

value: David Hafler

value: ENCBS892TKW at ENCODE; https://www.encodeproject.org/ENCBS892TKW/

value: Derived from ENCODE donor ENCDO922TOC; https://www.encodeproject.org/ENCDO922TOC/


title: Control ChIP-seq from K562 (ENCLB047GQC)

description:
https://www.encodeproject.org/experiments/ENCSR232JJY/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on human K562
experiment encode accession: ENCSR232JJY
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2021-05-18
lab: Michael Snyder, Stanford
library encode accession: ENCLB047GQC
fragmentation methods: sonication (Bioruptor Pico)
size range: 250-450

source_name: Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting MECOM

value: cell line

value: female

value: chronic myelogenous leukemia (CML)

value: 53 year

value: Michael Snyder, Stanford

value: ATCC

value: ENCBS132POB at ENCODE; https://www.encodeproject.org/ENCBS132POB/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: Mint-ChIP-seq from CD8-positive, alpha-beta memory T cell (ENCLB822BYJ)

description:
https://www.encodeproject.org/experiments/ENCSR218MSP/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 Mint-ChIP-seq of CD8-positive, alpha-beta memory T cell male adult (30 years)
experiment encode accession: ENCSR218MSP
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR890AQB
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB822BYJ
fragmentation methods: none

source_name: Homo sapiens male adult (30 years) CD8-positive, alpha-beta memory T primary cell

value: CD8-positive, alpha-beta memory T cell

value: primary cell

value: male

value: adult

value: 30 year

value: Yijun Ruan, JAX

value: AllCells

value: ENCBS122NLR at ENCODE; https://www.encodeproject.org/ENCBS122NLR/

value: Derived from ENCODE donor ENCDO166AGR; https://www.encodeproject.org/ENCDO166AGR/


title: Mint-ChIP-seq from CD8-positive, alpha-beta memory T cell (ENCLB024VIA)

description:
https://www.encodeproject.org/experiments/ENCSR218MSP/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K36me3 Mint-ChIP-seq of CD8-positive, alpha-beta memory T cell male adult (30 years)
experiment encode accession: ENCSR218MSP
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR890AQB
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB024VIA
fragmentation methods: none


title: Mint-ChIP-seq from activated CD8-positive, alpha-beta memory T cell (ENCLB372AYA)

description:
https://www.encodeproject.org/experiments/ENCSR217SHH/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR217SHH
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR466PQY
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB372AYA
fragmentation methods: none

source_name: Homo sapiens male adult (30 years) activated CD8-positive, alpha-beta memory T primary cell treated with 10 ng/mL Interleukin-2 , anti-CD3 and anti-CD28 coated beads

value: treatment_term_id:UniProtKB:P60568; treatment_term_name:Interleukin-2; treatment_type:protein; treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS039WVH at ENCODE; https://www.encodeproject.org/ENCBS039WVH/


title: Mint-ChIP-seq from immature natural killer cell (ENCLB460RVK)

description:
https://www.encodeproject.org/experiments/ENCSR747ZXN/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac Mint-ChIP-seq on human immature natural killer cell
experiment encode accession: ENCSR747ZXN
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR050UUC
encode release date: 2020-09-02
lab: Bradley Bernstein, Broad
library encode accession: ENCLB460RVK
fragmentation methods: none
instrument models: Illumina NovaSeq 6000,Illumina HiSeq 2500

value: immature natural killer cell

value: supplied by Hafler lab as part of Encode4 project starting July2017

value: not collected

value: healthy

value: unknown

value: Bradley Bernstein, Broad

value: David Hafler

value: ENCBS620QTW at ENCODE; https://www.encodeproject.org/ENCBS620QTW/

value: Derived from ENCODE donor ENCDO976NED; https://www.encodeproject.org/ENCDO976NED/


title: Mint-ChIP-seq from immature natural killer cell (ENCLB133EWZ)

description:
https://www.encodeproject.org/experiments/ENCSR747ZXN/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac Mint-ChIP-seq on human immature natural killer cell
experiment encode accession: ENCSR747ZXN
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR050UUC
encode release date: 2020-09-02
lab: Bradley Bernstein, Broad
library encode accession: ENCLB133EWZ
fragmentation methods: none
instrument models: Illumina NovaSeq 6000,Illumina HiSeq 2500

value: primary cell


title: Mint-ChIP-seq from neural crest cell (ENCLB929YVU)

description:
https://www.encodeproject.org/experiments/ENCSR133QMT/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR133QMT
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR713YQD
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB929YVU
fragmentation methods: none

source_name: Homo sapiens female embryo (5 days) neural crest in vitro differentiated cells originated from neural crest cell

value: neural crest cell

value: in vitro differentiated cells

value: WA09 derived neural crest cells

value: female

value: embryonic

value: 5 day

value: SESCC

value: ENCBS200JOD at ENCODE; https://www.encodeproject.org/ENCBS200JOD/

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: Mint-ChIP-seq from CD4-positive naive resting alpha-beta T cell (ENCLB966CJW)

description:
https://www.encodeproject.org/experiments/ENCSR217BBP/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me1 ChIP-seq on CD4-positive naive resting alpha-beta T cell male adult (43 years)
experiment encode accession: ENCSR217BBP
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR692OOM
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB966CJW
fragmentation methods: none

source_name: Homo sapiens male adult (43 years) CD4-positive naive resting alpha-beta T primary cell

value: male

value: adult

value: 43 year

value: Yijun Ruan, JAX

value: AllCells

value: ENCBS527XSO at ENCODE; https://www.encodeproject.org/ENCBS527XSO/

value: Derived from ENCODE donor ENCDO791UJG; https://www.encodeproject.org/ENCDO791UJG/


title: Mint-ChIP-seq from CD8-positive, alpha-beta memory T cell (ENCLB201MCG)

description:
https://www.encodeproject.org/experiments/ENCSR133GLP/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27me3 Mint-ChIP-seq of CD8-positive, alpha-beta memory T cell male adult (30 years)
experiment encode accession: ENCSR133GLP
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR890AQB
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB201MCG
fragmentation methods: none

value: CD8-positive, alpha-beta memory T cell

value: primary cell

value: 30 year

value: ENCBS122NLR at ENCODE; https://www.encodeproject.org/ENCBS122NLR/

value: Derived from ENCODE donor ENCDO166AGR; https://www.encodeproject.org/ENCDO166AGR/


title: Mint-ChIP-seq from CD4-positive naive resting alpha-beta T cell (ENCLB111WTW)

description:
https://www.encodeproject.org/experiments/ENCSR217BBP/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 ChIP-seq on CD4-positive naive resting alpha-beta T cell male adult (43 years)
experiment encode accession: ENCSR217BBP
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR692OOM
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB111WTW
fragmentation methods: none


title: Mint-ChIP-seq from immature natural killer cell (ENCLB262OJB)

description:
https://www.encodeproject.org/experiments/ENCSR604ATU/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K9me3 Mint-ChIP-seq on human immature natural killer cell
experiment encode accession: ENCSR604ATU
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR050UUC
encode release date: 2020-09-02
lab: Bradley Bernstein, Broad
library encode accession: ENCLB262OJB
fragmentation methods: none
instrument models: Illumina NovaSeq 6000,Illumina HiSeq 2500

value: immature natural killer cell

value: supplied by Hafler lab as part of Encode4 project starting July2017

value: not collected

value: healthy

value: unknown

value: Bradley Bernstein, Broad

value: David Hafler

value: ENCBS620QTW at ENCODE; https://www.encodeproject.org/ENCBS620QTW/

value: Derived from ENCODE donor ENCDO976NED; https://www.encodeproject.org/ENCDO976NED/


title: Mint-ChIP-seq from CD8-positive, alpha-beta memory T cell (ENCLB315VOR)

description:
https://www.encodeproject.org/experiments/ENCSR133GLP/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 Mint-ChIP-seq of CD8-positive, alpha-beta memory T cell male adult (30 years)
experiment encode accession: ENCSR133GLP
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR890AQB
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB315VOR
fragmentation methods: none

value: male

value: adult

value: Yijun Ruan, JAX

value: AllCells


title: Mint-ChIP-seq from naive thymus-derived CD8-positive, alpha-beta T cell (ENCLB113ISG)

description:
https://www.encodeproject.org/experiments/ENCSR131ZVC/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me3 Mint-ChIP-seq on human naive thymus-derived CD8-positive, alpha-beta T cell
experiment encode accession: ENCSR131ZVC
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR546UUS
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB113ISG
fragmentation methods: none

source_name: Homo sapiens naive thymus-derived CD8-positive, alpha-beta T primary cell, preserved by cryopreservation

value: primary cell

value: CD8+ naive CD3+ CD4- CD8+ CD45RA+ CD45RO-

value: ENCBS872QPK at ENCODE; https://www.encodeproject.org/ENCBS872QPK/

value: Derived from ENCODE donor ENCDO922TOC; https://www.encodeproject.org/ENCDO922TOC/


title: Mint-ChIP-seq from immature natural killer cell (ENCLB729OKW)

description:
https://www.encodeproject.org/experiments/ENCSR604ATU/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9me3 Mint-ChIP-seq on human immature natural killer cell
experiment encode accession: ENCSR604ATU
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR050UUC
encode release date: 2020-09-02
lab: Bradley Bernstein, Broad
library encode accession: ENCLB729OKW
fragmentation methods: none
instrument models: Illumina NovaSeq 6000,Illumina HiSeq 2500

value: immature natural killer cell


title: Mint-ChIP-seq from T-cell (ENCLB541ATF)

description:
https://www.encodeproject.org/experiments/ENCSR220CDK/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K36me3 ChIP-seq on T-cell male adult (38 years)
experiment encode accession: ENCSR220CDK
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR203XDG
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB541ATF
fragmentation methods: none

value: T-cell

value: CD3+ unactivated cells from Stam Lab at Altius.

value: 38 year

value: John Stamatoyannopoulos

value: ENCBS059XUY at ENCODE; https://www.encodeproject.org/ENCBS059XUY/

value: Derived from ENCODE donor ENCDO923WRX; https://www.encodeproject.org/ENCDO923WRX/


title: Mint-ChIP-seq from endothelial cell (ENCLB190XCR)

description:
https://www.encodeproject.org/experiments/ENCSR622UQY/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 Mint-ChIP-seq on human PGP1 derived endothelial cell
experiment encode accession: ENCSR622UQY
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR759ZAX
encode release date: 2021-05-18
lab: Bradley Bernstein, Broad
library encode accession: ENCLB190XCR
fragmentation methods: none

value: endothelial cell

value: in vitro differentiated cells

value: PGP1 derived endothelial cells

value: 53 year

value: Bradley Bernstein, Broad

value: George Church

value: ENCBS239VAD at ENCODE; https://www.encodeproject.org/ENCBS239VAD/

value: Derived from ENCODE donor ENCDO336AAA; https://www.encodeproject.org/ENCDO336AAA/


title: Control Mint-ChIP-seq from CD4-positive, alpha-beta memory T cell (ENCLB862XOJ)

description:
https://www.encodeproject.org/experiments/ENCSR131SAQ/
***************
biological replicate number: 1
technical replicate number: 2
description: Control Mint-ChIP-seq of CD4-positive, alpha-beta memory T cell originated from CD4-positive, alpha-beta memory T cell
experiment encode accession: ENCSR131SAQ
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2021-04-28
lab: Bradley Bernstein, Broad
library encode accession: ENCLB862XOJ

source_name: Homo sapiens CD4-positive, alpha-beta memory T primary cell with multiple sclerosis, preserved by cryopreservation

value: CD4-positive, alpha-beta memory T cell

value: primary cell

value: CD4+ memory CD3+ CD4+ CD8- CD45RA- CD45RO+ nonTreg

value: not collected

value: multiple sclerosis

value: unknown

value: David Hafler

value: ENCBS702KJW at ENCODE; https://www.encodeproject.org/ENCBS702KJW/

value: Derived from ENCODE donor ENCDO157PKH; https://www.encodeproject.org/ENCDO157PKH/


title: Mint-ChIP-seq from naive thymus-derived CD8-positive, alpha-beta T cell (ENCLB357ZKL)

description:
https://www.encodeproject.org/experiments/ENCSR131ZVC/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 Mint-ChIP-seq on human naive thymus-derived CD8-positive, alpha-beta T cell
experiment encode accession: ENCSR131ZVC
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR546UUS
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB357ZKL
fragmentation methods: none

value: CD8+ naive CD3+ CD4- CD8+ CD45RA+ CD45RO-

value: healthy

value: ENCBS872QPK at ENCODE; https://www.encodeproject.org/ENCBS872QPK/

value: Derived from ENCODE donor ENCDO922TOC; https://www.encodeproject.org/ENCDO922TOC/


title: Mint-ChIP-seq from naive B cell (ENCLB084KRQ)

description:
https://www.encodeproject.org/experiments/ENCSR030WTO/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 Mint-ChIP-seq on human naive B cell
experiment encode accession: ENCSR030WTO
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR499CKV
encode release date: 2020-09-05
lab: Bradley Bernstein, Broad
library encode accession: ENCLB084KRQ
fragmentation methods: none
instrument models: Illumina NextSeq 500,Illumina NovaSeq 6000,Illumina HiSeq 2500

value: naive B cell

value: B naive CD3- CD14- CD19+ CD27- IgD+

value: Bradley Bernstein, Broad

value: ENCBS644KFM at ENCODE; https://www.encodeproject.org/ENCBS644KFM/

value: Derived from ENCODE donor ENCDO976NED; https://www.encodeproject.org/ENCDO976NED/


title: Control Mint-ChIP-seq from CD4-positive, alpha-beta memory T cell (ENCLB190PJK)

description:
https://www.encodeproject.org/experiments/ENCSR131SAQ/
***************
biological replicate number: 1
technical replicate number: 1
description: Control Mint-ChIP-seq of CD4-positive, alpha-beta memory T cell originated from CD4-positive, alpha-beta memory T cell
experiment encode accession: ENCSR131SAQ
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2021-04-28
lab: Bradley Bernstein, Broad
library encode accession: ENCLB190PJK

value: CD4-positive, alpha-beta memory T cell

value: primary cell


title: Mint-ChIP-seq from naive thymus-derived CD8-positive, alpha-beta T cell (ENCLB233VRG)

description:
https://www.encodeproject.org/experiments/ENCSR035PJY/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K36me3 Mint-ChIP-seq on human naive thymus-derived CD8-positive, alpha-beta T cell
experiment encode accession: ENCSR035PJY
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR371GOJ
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB233VRG
fragmentation methods: none

value: not collected

value: ENCBS044FCF at ENCODE; https://www.encodeproject.org/ENCBS044FCF/


title: Mint-ChIP-seq from naive thymus-derived CD8-positive, alpha-beta T cell (ENCLB666VQA)

description:
https://www.encodeproject.org/experiments/ENCSR035PJY/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 Mint-ChIP-seq on human naive thymus-derived CD8-positive, alpha-beta T cell
experiment encode accession: ENCSR035PJY
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR371GOJ
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB666VQA
fragmentation methods: none

value: unknown


title: Mint-ChIP-seq from T-cell (ENCLB532MDO)

description:
https://www.encodeproject.org/experiments/ENCSR214UVC/
***************
biological replicate number: 1
technical replicate number: 4
description:
experiment encode accession: ENCSR214UVC
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR445KDW
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB532MDO
fragmentation methods: none

source_name: Homo sapiens male adult (42 years) T-cell primary cell

value: T-cell

value: male

value: adult

value: 42 year

value: John Stamatoyannopoulos, UW

value: AllCells

value: ENCBS038FPK at ENCODE; https://www.encodeproject.org/ENCBS038FPK/

value: Derived from ENCODE donor ENCDO833KUM; https://www.encodeproject.org/ENCDO833KUM/


title: Mint-ChIP-seq from CD8-positive, alpha-beta T cell (ENCLB857FVK)

description:
https://www.encodeproject.org/experiments/ENCSR213EES/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR213EES
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR820SXH
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB857FVK
fragmentation methods: none

source_name: Homo sapiens male adult (21 years) CD8-positive, alpha-beta T primary cell

value: CD8-positive, alpha-beta T cell

value: 21 year

value: Yijun Ruan, JAX

value: ENCBS832HZD at ENCODE; https://www.encodeproject.org/ENCBS832HZD/

value: Derived from ENCODE donor ENCDO781BMZ; https://www.encodeproject.org/ENCDO781BMZ/


title: Mint-ChIP-seq from T-cell (ENCLB104MJD)

description:
https://www.encodeproject.org/experiments/ENCSR214UVC/
***************
biological replicate number: 1
technical replicate number: 3
description:
experiment encode accession: ENCSR214UVC
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR445KDW
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB104MJD
fragmentation methods: none

value: primary cell


title: Mint-ChIP-seq from activated CD8-positive, alpha-beta memory T cell (ENCLB665UZV)

description:
https://www.encodeproject.org/experiments/ENCSR217SHH/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR217SHH
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR466PQY
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB665UZV
fragmentation methods: none

value: 30 year

value: treatment_term_id:UniProtKB:P60568; treatment_term_name:Interleukin-2; treatment_type:protein; treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS039WVH at ENCODE; https://www.encodeproject.org/ENCBS039WVH/

value: Derived from ENCODE donor ENCDO166AGR; https://www.encodeproject.org/ENCDO166AGR/


title: Mint-ChIP-seq from T-cell (ENCLB169GUB)

description:
https://www.encodeproject.org/experiments/ENCSR214UVC/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR214UVC
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR445KDW
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB169GUB
fragmentation methods: none

value: T-cell

value: male


title: Mint-ChIP-seq from CD8-positive, alpha-beta T cell (ENCLB665TYW)

description:
https://www.encodeproject.org/experiments/ENCSR213EES/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR213EES
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR820SXH
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB665TYW
fragmentation methods: none

value: adult


title: Mint-ChIP-seq from T-cell (ENCLB513BIO)

description:
https://www.encodeproject.org/experiments/ENCSR214UVC/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR214UVC
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR445KDW
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB513BIO
fragmentation methods: none

value: 42 year

value: John Stamatoyannopoulos, UW


title: Mint-ChIP-seq from neural crest cell (ENCLB063ZGN)

description:
https://www.encodeproject.org/experiments/ENCSR133QMT/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR133QMT
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR713YQD
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB063ZGN
fragmentation methods: none

value: neural crest cell

value: in vitro differentiated cells

value: WA09 derived neural crest cells

value: female

value: healthy

value: embryonic

value: 5 day

value: Bradley Bernstein, Broad

value: SESCC

value: ENCBS200JOD at ENCODE; https://www.encodeproject.org/ENCBS200JOD/

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: WGS from K562 (ENCLB531FQO)

description:
https://www.encodeproject.org/experiments/ENCSR025GPQ/
***************
biological replicate number: 1
technical replicate number: 1
description: These data correspond to shotgun PE151 Illumina sequencing done on long insert fragmented gDNA from the K562 cell line
experiment encode accession: ENCSR025GPQ
assay title: WGS
assembly: hg19
possible controls: ENCSR711UNY
encode release date: 2017-12-19
lab: Alexander Urban, Stanford
library encode accession: ENCLB531FQO
fragmentation methods: chemical (Nextera tagmentation)
size range: 2963-2963
nucleic acid starting quantity: 2
nucleic acid starting quantity units: µg

source_name: Homo sapiens K562 cell line

extract_protocol:
pipeline protocol: https://www.encodeproject.org/documents/0a14f50a-5674-4f33-9b5d-2d169750c8aa/@@download/attachment/Supplementary%20Figure%201_duplicate.pdf
pipeline protocol: https://www.encodeproject.org/documents/a4b3a2eb-e2e2-49d8-b724-20bf963aa842/@@download/attachment/updated_Experiment%20accession%20ENCSR025GPQ.pdf
standards document: https://www.encodeproject.org/documents/a89a3f2d-2bf7-4762-8bfe-dde07841ecbb/@@download/attachment/ENCSR025GPQ_variant_call_file_details.pdf
extraction method: QIAGEN DNeasy Blood & Tissue Kit
extraction protocol: https://www.encodeproject.org/documents/95ebdfee-474e-4b23-83f4-a6fcb9bbe235/@@download/attachment/nextera_mate_pair_sample_prep_guide_15035209_d.pdf

value: cell line

value: chronic myelogenous leukemia (CML)

value: 53 year

value: Alexander Urban, Stanford

value: Michael Snyder

value: ENCBS806UYV at ENCODE; https://www.encodeproject.org/ENCBS806UYV/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: Mint-ChIP-seq from CD8-positive, alpha-beta memory T cell (ENCLB553XIE)

description:
https://www.encodeproject.org/experiments/ENCSR122JCM/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27me3 Mint-ChIP-seq of CD8-positive, alpha-beta memory T cell originated from CD8-positive, alpha-beta memory T cell
experiment encode accession: ENCSR122JCM
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR231SVU
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB553XIE
fragmentation methods: none

source_name: Homo sapiens CD8-positive, alpha-beta memory T primary cell with multiple sclerosis, preserved by cryopreservation

value: CD8-positive, alpha-beta memory T cell

value: primary cell

value: CD8+ memory CD3+ CD4- CD8+ CD45RA- CD45RO+

value: not collected

value: multiple sclerosis

value: unknown

value: David Hafler

value: ENCBS347VRW at ENCODE; https://www.encodeproject.org/ENCBS347VRW/

value: Derived from ENCODE donor ENCDO157PKH; https://www.encodeproject.org/ENCDO157PKH/


title: Mint-ChIP-seq from activated CD8-positive, alpha-beta memory T cell (ENCLB324RRF)

description:
https://www.encodeproject.org/experiments/ENCSR123ZAT/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR123ZAT
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR466PQY
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB324RRF
fragmentation methods: none

value: male

value: adult

value: 30 year

value: Yijun Ruan, JAX

value: AllCells

value: treatment_term_id:UniProtKB:P60568; treatment_term_name:Interleukin-2; treatment_type:protein; treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS039WVH at ENCODE; https://www.encodeproject.org/ENCBS039WVH/

value: Derived from ENCODE donor ENCDO166AGR; https://www.encodeproject.org/ENCDO166AGR/


title: Mint-ChIP-seq from activated CD8-positive, alpha-beta memory T cell (ENCLB693ELP)

description:
https://www.encodeproject.org/experiments/ENCSR123ZAT/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR123ZAT
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR466PQY
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB693ELP
fragmentation methods: none


title: Mint-ChIP-seq from CD14-positive monocyte (ENCLB394AGW)

description:
https://www.encodeproject.org/experiments/ENCSR378EPS/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac Mint-ChIP-seq on human CD14-positive monocyte
experiment encode accession: ENCSR378EPS
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR509FRR
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB394AGW
fragmentation methods: none
instrument models: Illumina NovaSeq 6000,Illumina NextSeq 500

source_name: Homo sapiens CD14-positive monocyte primary cell with multiple sclerosis, preserved by cryopreservation

value: CD14-positive monocyte

value: Monocyte CD3- CD14+ CD19-

value: Bradley Bernstein, Broad

value: ENCBS080GJD at ENCODE; https://www.encodeproject.org/ENCBS080GJD/

value: Derived from ENCODE donor ENCDO187BUH; https://www.encodeproject.org/ENCDO187BUH/


title: Mint-ChIP-seq from CD8-positive, alpha-beta memory T cell (ENCLB283TTQ)

description:
https://www.encodeproject.org/experiments/ENCSR122JCM/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 Mint-ChIP-seq of CD8-positive, alpha-beta memory T cell originated from CD8-positive, alpha-beta memory T cell
experiment encode accession: ENCSR122JCM
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR231SVU
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB283TTQ
fragmentation methods: none

value: CD8-positive, alpha-beta memory T cell

value: primary cell

value: CD8+ memory CD3+ CD4- CD8+ CD45RA- CD45RO+

value: not collected

value: multiple sclerosis

value: unknown


title: Mint-ChIP-seq from CD14-positive monocyte (ENCLB501CTF)

description:
https://www.encodeproject.org/experiments/ENCSR378EPS/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac Mint-ChIP-seq on human CD14-positive monocyte
experiment encode accession: ENCSR378EPS
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR509FRR
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB501CTF
fragmentation methods: none
instrument models: Illumina NovaSeq 6000,Illumina NextSeq 500

value: David Hafler


title: Mint-ChIP-seq from CD4-positive naive resting alpha-beta T cell (ENCLB497CEV)

description:
https://www.encodeproject.org/experiments/ENCSR019OML/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me3 ChIP-seq on CD4-positive naive resting alpha-beta T cell male adult (43 years)
experiment encode accession: ENCSR019OML
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR692OOM
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB497CEV
fragmentation methods: none

value: male

value: adult

value: 43 year

value: Yijun Ruan, JAX

value: ENCBS527XSO at ENCODE; https://www.encodeproject.org/ENCBS527XSO/

value: Derived from ENCODE donor ENCDO791UJG; https://www.encodeproject.org/ENCDO791UJG/


title: Mint-ChIP-seq from astrocyte (ENCLB815FJL)

description:
https://www.encodeproject.org/experiments/ENCSR020LAQ/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me3 Mint-ChIP-seq on human PGP1 derived astrocyte
experiment encode accession: ENCSR020LAQ
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR731CEI
encode release date: 2021-05-18
lab: Bradley Bernstein, Broad
library encode accession: ENCLB815FJL
fragmentation methods: none

source_name: Homo sapiens male adult (53 years) astrocyte in vitro differentiated cells originated from astrocyte, preserved by cryopreservation

value: astrocyte

value: in vitro differentiated cells

value: PGP1 derived astrocytes

value: 53 year

value: George Church

value: ENCBS534DJA at ENCODE; https://www.encodeproject.org/ENCBS534DJA/

value: Derived from ENCODE donor ENCDO336AAA; https://www.encodeproject.org/ENCDO336AAA/


title: Mint-ChIP-seq from CD4-positive, alpha-beta memory T cell (ENCLB561QZN)

description:
https://www.encodeproject.org/experiments/ENCSR471WZE/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K36me3 Mint-ChIP-seq on human CD4-positive, alpha-beta memory T cell
experiment encode accession: ENCSR471WZE
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR283LWF
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB561QZN
fragmentation methods: none
instrument models: Illumina NovaSeq 6000,Illumina HiSeq 2500

value: CD4-positive, alpha-beta memory T cell

value: primary cell

value: CD4+ memory CD3+ CD4+ CD8- CD45RA- CD45RO+ nonTreg

value: not collected

value: Bradley Bernstein, Broad

value: ENCBS812ZCI at ENCODE; https://www.encodeproject.org/ENCBS812ZCI/

value: Derived from ENCODE donor ENCDO187BUH; https://www.encodeproject.org/ENCDO187BUH/


title: Mint-ChIP-seq from CD4-positive naive resting alpha-beta T cell (ENCLB709HXJ)

description:
https://www.encodeproject.org/experiments/ENCSR019OML/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 ChIP-seq on CD4-positive naive resting alpha-beta T cell male adult (43 years)
experiment encode accession: ENCSR019OML
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR692OOM
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB709HXJ
fragmentation methods: none

value: male

value: adult

value: 43 year

value: Yijun Ruan, JAX

value: AllCells


title: Mint-ChIP-seq from CD4-positive, alpha-beta T cell (ENCLB316DNJ)

description:
https://www.encodeproject.org/experiments/ENCSR019HQR/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9me3 ChIP-seq on CD4-positive, alpha-beta T cell male adult (20 years)
experiment encode accession: ENCSR019HQR
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR774CGN
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB316DNJ
fragmentation methods: none

source_name: Homo sapiens male adult (20 years) CD4-positive, alpha-beta T primary cell

value: CD4-positive, alpha-beta T cell

value: 20 year

value: ENCBS151VTD at ENCODE; https://www.encodeproject.org/ENCBS151VTD/

value: Derived from ENCODE donor ENCDO394DKX; https://www.encodeproject.org/ENCDO394DKX/


title: Mint-ChIP-seq from naive B cell (ENCLB465XFW)

description:
https://www.encodeproject.org/experiments/ENCSR030WTO/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me1 Mint-ChIP-seq on human naive B cell
experiment encode accession: ENCSR030WTO
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR499CKV
encode release date: 2020-09-05
lab: Bradley Bernstein, Broad
library encode accession: ENCLB465XFW
fragmentation methods: none
instrument models: Illumina NextSeq 500,Illumina NovaSeq 6000,Illumina HiSeq 2500

source_name: Homo sapiens naive B primary cell, preserved by cryopreservation

value: naive B cell

value: B naive CD3- CD14- CD19+ CD27- IgD+

value: healthy

value: unknown

value: David Hafler

value: ENCBS644KFM at ENCODE; https://www.encodeproject.org/ENCBS644KFM/

value: Derived from ENCODE donor ENCDO976NED; https://www.encodeproject.org/ENCDO976NED/


title: Control Mint-ChIP-seq from naive B cell (ENCLB085AAM)

description:
https://www.encodeproject.org/experiments/ENCSR119CTT/
***************
biological replicate number: 1
technical replicate number: 2
description: Control Mint-ChIP-seq on human naive B cell
experiment encode accession: ENCSR119CTT
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-08-04
lab: Bradley Bernstein, Broad
library encode accession: ENCLB085AAM

value: primary cell

value: not collected

value: Bradley Bernstein, Broad

value: ENCBS182GUX at ENCODE; https://www.encodeproject.org/ENCBS182GUX/

value: Derived from ENCODE donor ENCDO922TOC; https://www.encodeproject.org/ENCDO922TOC/


title: Control ChIP-seq from SK-N-SH (ENCLB713NBX)

description:
https://www.encodeproject.org/experiments/ENCSR209FGM/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on human SK-N-SH
experiment encode accession: ENCSR209FGM
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2020-08-21
lab: Michael Snyder, Stanford
library encode accession: ENCLB713NBX
fragmentation methods: sonication (Bioruptor Pico)
size range: 250-450

source_name: Homo sapiens SK-N-SH cell line treated with 6 uM all-trans-retinoic acid for 48 hours

value: SK-N-SH

value: cell line

value: female

value: Metastatic neuroblastoma from bone marrow

value: child

value: 4 year

value: Michael Snyder, Stanford

value: ATCC

value: treatment_term_id:CHEBI:15367; treatment_term_name:all-trans-retinoic acid; treatment_type:chemical; duration:48; duration_units:hour;

value: ENCBS244CCF at ENCODE; https://www.encodeproject.org/ENCBS244CCF/

value: Derived from ENCODE donor ENCDO000ABD; https://www.encodeproject.org/ENCDO000ABD/


title: Mint-ChIP-seq from CD4-positive, alpha-beta T cell (ENCLB350CRV)

description:
https://www.encodeproject.org/experiments/ENCSR019HQR/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K9me3 ChIP-seq on CD4-positive, alpha-beta T cell male adult (20 years)
experiment encode accession: ENCSR019HQR
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR774CGN
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB350CRV
fragmentation methods: none

value: CD4-positive, alpha-beta T cell

value: male

value: adult

value: 20 year

value: Yijun Ruan, JAX

value: AllCells

value: ENCBS151VTD at ENCODE; https://www.encodeproject.org/ENCBS151VTD/

value: Derived from ENCODE donor ENCDO394DKX; https://www.encodeproject.org/ENCDO394DKX/


title: Control ChIP-seq from K562 (ENCLB790ZDC)

description:
https://www.encodeproject.org/experiments/ENCSR209ADM/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on human K562
experiment encode accession: ENCSR209ADM
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2021-05-18
lab: Michael Snyder, Stanford
library encode accession: ENCLB790ZDC
fragmentation methods: sonication (Bioruptor Pico)
size range: 250-450

source_name: Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting RBPJ

value: cell line

value: female

value: chronic myelogenous leukemia (CML)

value: 53 year

value: ENCBS436HHQ at ENCODE; https://www.encodeproject.org/ENCBS436HHQ/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: Control Mint-ChIP-seq from naive B cell (ENCLB907NHM)

description:
https://www.encodeproject.org/experiments/ENCSR119CTT/
***************
biological replicate number: 1
technical replicate number: 1
description: Control Mint-ChIP-seq on human naive B cell
experiment encode accession: ENCSR119CTT
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-08-04
lab: Bradley Bernstein, Broad
library encode accession: ENCLB907NHM

value: naive B cell

value: primary cell

value: B naive CD3- CD14- CD19+ CD27- IgD+

value: not collected

value: healthy

value: unknown

value: Bradley Bernstein, Broad

value: David Hafler

value: ENCBS182GUX at ENCODE; https://www.encodeproject.org/ENCBS182GUX/

value: Derived from ENCODE donor ENCDO922TOC; https://www.encodeproject.org/ENCDO922TOC/


title: Mint-ChIP-seq from immature natural killer cell (ENCLB038DVO)

description:
https://www.encodeproject.org/experiments/ENCSR467ZCD/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K36me3 Mint-ChIP-seq on human immature natural killer cell
experiment encode accession: ENCSR467ZCD
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR050UUC
encode release date: 2020-09-02
lab: Bradley Bernstein, Broad
library encode accession: ENCLB038DVO
fragmentation methods: none
instrument models: Illumina NovaSeq 6000,Illumina HiSeq 2500

source_name: Homo sapiens immature natural killer primary cell

value: immature natural killer cell

value: supplied by Hafler lab as part of Encode4 project starting July2017

value: ENCBS620QTW at ENCODE; https://www.encodeproject.org/ENCBS620QTW/

value: Derived from ENCODE donor ENCDO976NED; https://www.encodeproject.org/ENCDO976NED/


title: Mint-ChIP-seq from immature natural killer cell (ENCLB766UTP)

description:
https://www.encodeproject.org/experiments/ENCSR467ZCD/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 Mint-ChIP-seq on human immature natural killer cell
experiment encode accession: ENCSR467ZCD
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR050UUC
encode release date: 2020-09-02
lab: Bradley Bernstein, Broad
library encode accession: ENCLB766UTP
fragmentation methods: none
instrument models: Illumina NovaSeq 6000,Illumina HiSeq 2500


title: Mint-ChIP-seq from CD14-positive monocyte (ENCLB729BCO)

description:
https://www.encodeproject.org/experiments/ENCSR465SUK/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27me3 Mint-ChIP-seq on human CD14-positive monocyte
experiment encode accession: ENCSR465SUK
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR365IQY
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB729BCO
fragmentation methods: none

source_name: Homo sapiens CD14-positive monocyte primary cell, preserved by cryopreservation

value: CD14-positive monocyte

value: Monocyte CD3- CD14+ CD19-

value: ENCBS747UFJ at ENCODE; https://www.encodeproject.org/ENCBS747UFJ/


title: Mint-ChIP-seq from CD14-positive monocyte (ENCLB105UFT)

description:
https://www.encodeproject.org/experiments/ENCSR465SUK/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 Mint-ChIP-seq on human CD14-positive monocyte
experiment encode accession: ENCSR465SUK
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR365IQY
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB105UFT
fragmentation methods: none


title: Mint-ChIP-seq from GM23338 (ENCLB262QBZ)

description:
https://www.encodeproject.org/experiments/ENCSR370JJY/
***************
biological replicate number: 2
technical replicate number: 2
description: H3K27ac Mint-ChIP-seq on human GM23338
experiment encode accession: ENCSR370JJY
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR787HYA
encode release date: 2020-07-30
lab: Bradley Bernstein, Broad
library encode accession: ENCLB262QBZ
fragmentation methods: none
instrument models: Illumina NovaSeq 6000,Illumina NextSeq 500

source_name: Homo sapiens GM23338 cell line

value: cell line

value: PGP-1 iPSCs provided by the George Church lab at HMS. purity 100%

value: male

value: adult

value: 53 year

value: Paola Arlotta

value: ENCBS695QJS at ENCODE; https://www.encodeproject.org/ENCBS695QJS/

value: Derived from ENCODE donor ENCDO336AAA; https://www.encodeproject.org/ENCDO336AAA/


title: Mint-ChIP-seq from naive thymus-derived CD8-positive, alpha-beta T cell (ENCLB214CSQ)

description:
https://www.encodeproject.org/experiments/ENCSR116FVG/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 Mint-ChIP-seq on human naive thymus-derived CD8-positive, alpha-beta T cell
experiment encode accession: ENCSR116FVG
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR034MTZ
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB214CSQ
fragmentation methods: none
instrument models: Illumina NextSeq 500,Illumina HiSeq 2500,Illumina NovaSeq 6000

source_name: Homo sapiens naive thymus-derived CD8-positive, alpha-beta T primary cell with multiple sclerosis, preserved by cryopreservation

value: primary cell

value: CD8+ naive CD3+ CD4- CD8+ CD45RA+ CD45RO-

value: not collected

value: multiple sclerosis

value: unknown

value: Bradley Bernstein, Broad

value: David Hafler

value: ENCBS512HTQ at ENCODE; https://www.encodeproject.org/ENCBS512HTQ/

value: Derived from ENCODE donor ENCDO187BUH; https://www.encodeproject.org/ENCDO187BUH/