title: Mint-ChIP-seq from CD4-positive naive resting alpha-beta T cell (ENCLB905KDI)

description:
https://www.encodeproject.org/experiments/ENCSR898DRE/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9me3 ChIP-seq on CD4-positive naive resting alpha-beta T cell male adult (43 years)
experiment encode accession: ENCSR898DRE
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR692OOM
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB905KDI
fragmentation methods: none

source_name: Homo sapiens male adult (43 years) CD4-positive naive resting alpha-beta T primary cell

value: 43 year

value: ENCBS527XSO at ENCODE; https://www.encodeproject.org/ENCBS527XSO/

value: Derived from ENCODE donor ENCDO791UJG; https://www.encodeproject.org/ENCDO791UJG/


title: Mint-ChIP-seq from activated CD4 positive, naive alpha-beta T cell (ENCLB405PDM)

status: Public on Jun 15 2021

type: SRA

city: Stanford

first: ENCODE

last: DCC

state: CA

address: 300 Pasteur Dr

country: USA

institute: ENCODE DCC

description:
https://www.encodeproject.org/experiments/ENCSR889GVN/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR889GVN
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR764JRB
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB405PDM
fragmentation methods: none

library_source: genomic

data_processing: See GSM*_README.txt supplementary file linked below

molecule: genomic DNA

organism: Homo sapiens

source_name: Homo sapiens male adult (43 years) activated CD4 positive, naive alpha-beta T primary cell treated with 10 ng/mL Interleukin-2 , anti-CD3 and anti-CD28 coated beads

tag: antibody

value: primary cell

tag: biosample encode accession

tag: Sex

value: male

tag: dev stage

value: adult

tag: age

tag: lab

value: Yijun Ruan, JAX

tag: source

value: AllCells

tag: treatments

value: treatment_term_id:UniProtKB:P60568; treatment_term_name:Interleukin-2; treatment_type:protein; treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

tag: link

value: ENCBS377CVF at ENCODE; https://www.encodeproject.org/ENCBS377CVF/


title: Mint-ChIP-seq from CD8-positive, alpha-beta memory T cell (ENCLB923IUX)

description:
https://www.encodeproject.org/experiments/ENCSR231XAP/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me1 Mint-ChIP-seq on human CD8-positive, alpha-beta memory T cell
experiment encode accession: ENCSR231XAP
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR128KDZ
encode release date: 2020-07-30
lab: Bradley Bernstein, Broad
library encode accession: ENCLB923IUX
fragmentation methods: none

source_name: Homo sapiens CD8-positive, alpha-beta memory T primary cell with multiple sclerosis

value: CD8-positive, alpha-beta memory T cell

tag: description

value: supplied by Hafler lab as part of Encode4 project starting July2017

value: not collected

tag: health state

value: multiple sclerosis

value: unknown

value: Bradley Bernstein, Broad

value: David Hafler

value: ENCBS757PLC at ENCODE; https://www.encodeproject.org/ENCBS757PLC/

value: Derived from ENCODE donor ENCDO553CCA; https://www.encodeproject.org/ENCDO553CCA/


title: Mint-ChIP-seq from CD4-positive naive resting alpha-beta T cell (ENCLB808KGD)

description:
https://www.encodeproject.org/experiments/ENCSR898DRE/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K9me3 ChIP-seq on CD4-positive naive resting alpha-beta T cell male adult (43 years)
experiment encode accession: ENCSR898DRE
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR692OOM
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB808KGD
fragmentation methods: none

value: 43 year

value: ENCBS527XSO at ENCODE; https://www.encodeproject.org/ENCBS527XSO/

value: Derived from ENCODE donor ENCDO791UJG; https://www.encodeproject.org/ENCDO791UJG/


title: Mint-ChIP-seq from naive B cell (ENCLB461WTX)

description:
https://www.encodeproject.org/experiments/ENCSR884MVN/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me3 Mint-ChIP-seq on human naive B cell
experiment encode accession: ENCSR884MVN
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR119CTT
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB461WTX
fragmentation methods: none

source_name: Homo sapiens naive B primary cell, preserved by cryopreservation

value: naive B cell

value: primary cell

value: B naive CD3- CD14- CD19+ CD27- IgD+

value: healthy

value: ENCBS182GUX at ENCODE; https://www.encodeproject.org/ENCBS182GUX/

value: Derived from ENCODE donor ENCDO922TOC; https://www.encodeproject.org/ENCDO922TOC/


title: Control Mint-ChIP-seq from activated T-cell (ENCLB428WYW)

description:
https://www.encodeproject.org/experiments/ENCSR897COL/
***************
biological replicate number: 1
technical replicate number: 1
description: Control Mint-ChIP-seq on activated T-cell male adult (38 years)
experiment encode accession: ENCSR897COL
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-08-04
lab: Bradley Bernstein, Broad
library encode accession: ENCLB428WYW

source_name: Homo sapiens male adult (38 years) activated T-cell primary cell

value: activated T-cell

value: Activated with 1:1 ratio of CD3, CD28 beads for 24 hours by Stam lab at Altius.

value: male

value: adult

value: 38 year

value: John Stamatoyannopoulos

value: ENCBS833ENP at ENCODE; https://www.encodeproject.org/ENCBS833ENP/

value: Derived from ENCODE donor ENCDO923WRX; https://www.encodeproject.org/ENCDO923WRX/


title: Mint-ChIP-seq from activated CD8-positive, alpha-beta memory T cell (ENCLB225HJZ)

description:
https://www.encodeproject.org/experiments/ENCSR976RWL/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac Mint-ChIP-seq of activated CD8-positive, alpha-beta T cell male adult (30 years) treated with 10 ng
experiment encode accession: ENCSR976RWL
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR466PQY
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB225HJZ
fragmentation methods: none

source_name: Homo sapiens male adult (30 years) activated CD8-positive, alpha-beta memory T primary cell treated with 10 ng/mL Interleukin-2 , anti-CD3 and anti-CD28 coated beads

value: 30 year

value: Yijun Ruan, JAX

value: AllCells

value: treatment_term_id:UniProtKB:P60568; treatment_term_name:Interleukin-2; treatment_type:protein; treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS039WVH at ENCODE; https://www.encodeproject.org/ENCBS039WVH/

value: Derived from ENCODE donor ENCDO166AGR; https://www.encodeproject.org/ENCDO166AGR/


title: Mint-ChIP-seq from activated CD4 positive, naive alpha-beta T cell (ENCLB222LAL)

description:
https://www.encodeproject.org/experiments/ENCSR865YWD/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 Mint-ChIP-seq of activated CD4-positive, alpha-beta T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads
experiment encode accession: ENCSR865YWD
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR053AWV
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB222LAL
fragmentation methods: none

source_name: Homo sapiens male adult (43 years) activated CD4 positive, naive alpha-beta T primary cell treated with anti-CD3 and anti-CD28 coated beads

value: primary cell

value: 43 year

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS212SYV at ENCODE; https://www.encodeproject.org/ENCBS212SYV/

value: Derived from ENCODE donor ENCDO791UJG; https://www.encodeproject.org/ENCDO791UJG/


title: Mint-ChIP-seq from IgD-negative memory B cell (ENCLB841DJO)

description:
https://www.encodeproject.org/experiments/ENCSR983MKX/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR983MKX
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR354FME
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB841DJO
fragmentation methods: none

source_name: Homo sapiens IgD-negative memory B primary cell with multiple sclerosis, preserved by cryopreservation

value: IgD-negative memory B cell

value: B memory CD3- CD14- CD19+ CD27+ IgD-

value: not collected

value: multiple sclerosis

value: unknown

value: Bradley Bernstein, Broad

value: David Hafler

value: ENCBS091EUT at ENCODE; https://www.encodeproject.org/ENCBS091EUT/

value: Derived from ENCODE donor ENCDO187BUH; https://www.encodeproject.org/ENCDO187BUH/


title: Control Mint-ChIP-seq from brain (ENCLB064HRV)

description:
https://www.encodeproject.org/experiments/ENCSR141MUD/
***************
biological replicate number: 3
technical replicate number: 2
description: Control Mint-ChIP-seq on human PGP1 derived brain organoid
experiment encode accession: ENCSR141MUD
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-07-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB064HRV

source_name: Homo sapiens male adult (53 years) brain organoid, 90 days post differentiation

value: brain

value: organoid

value: brain organoids created by Arlotta lab using new protocol to create more reliable organoids.

value: male

value: adult

value: 53 year

value: Paola Arlotta

value: ENCBS524OMS at ENCODE; https://www.encodeproject.org/ENCBS524OMS/

value: Derived from ENCODE donor ENCDO336AAA; https://www.encodeproject.org/ENCDO336AAA/


title: Mint-ChIP-seq from brain (ENCLB235FWZ)

description:
https://www.encodeproject.org/experiments/ENCSR045KAM/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9me3 Mint-ChIP-seq on human H9 derived brain organoid
experiment encode accession: ENCSR045KAM
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR389BJR
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB235FWZ
fragmentation methods: none

source_name: Homo sapiens female embryo (5 days) brain organoid, 180 days post differentiation

value: female

value: healthy

value: embryonic

value: 5 day

value: ENCBS615FKW at ENCODE; https://www.encodeproject.org/ENCBS615FKW/

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: Control Mint-ChIP-seq from brain (ENCLB119YCG)

description:
https://www.encodeproject.org/experiments/ENCSR141MUD/
***************
biological replicate number: 2
technical replicate number: 1
description: Control Mint-ChIP-seq on human PGP1 derived brain organoid
experiment encode accession: ENCSR141MUD
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-07-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB119YCG

value: Bradley Bernstein, Broad

value: ENCBS377FQM at ENCODE; https://www.encodeproject.org/ENCBS377FQM/


title: Mint-ChIP-seq from CD14-positive monocyte (ENCLB839KDV)

description:
https://www.encodeproject.org/experiments/ENCSR071LSL/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 Mint-ChIP-seq on human CD14-positive monocyte
experiment encode accession: ENCSR071LSL
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR958CUX
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB839KDV
fragmentation methods: none

source_name: Homo sapiens CD14-positive monocyte primary cell with multiple sclerosis, preserved by cryopreservation

value: CD14-positive monocyte

value: primary cell

value: Monocyte CD3- CD14+ CD19-

value: not collected

value: multiple sclerosis

value: unknown

value: David Hafler

value: ENCBS929PLQ at ENCODE; https://www.encodeproject.org/ENCBS929PLQ/

value: Derived from ENCODE donor ENCDO553CCA; https://www.encodeproject.org/ENCDO553CCA/


title: Mint-ChIP-seq from brain (ENCLB516CCY)

description:
https://www.encodeproject.org/experiments/ENCSR045KAM/
***************
biological replicate number: 2
technical replicate number: 2
description: H3K9me3 Mint-ChIP-seq on human H9 derived brain organoid
experiment encode accession: ENCSR045KAM
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR389BJR
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB516CCY
fragmentation methods: none

value: brain

value: organoid

value: female

value: Paola Arlotta


title: Control Mint-ChIP-seq from activated T-cell (ENCLB468BAW)

description:
https://www.encodeproject.org/experiments/ENCSR897COL/
***************
biological replicate number: 1
technical replicate number: 2
description: Control Mint-ChIP-seq on activated T-cell male adult (38 years)
experiment encode accession: ENCSR897COL
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-08-04
lab: Bradley Bernstein, Broad
library encode accession: ENCLB468BAW

value: activated T-cell

value: Activated with 1:1 ratio of CD3, CD28 beads for 24 hours by Stam lab at Altius.

value: male

value: adult

value: 38 year

value: John Stamatoyannopoulos

value: ENCBS833ENP at ENCODE; https://www.encodeproject.org/ENCBS833ENP/

value: Derived from ENCODE donor ENCDO923WRX; https://www.encodeproject.org/ENCDO923WRX/


title: Mint-ChIP-seq from CD8-positive, alpha-beta memory T cell (ENCLB912NAN)

description:
https://www.encodeproject.org/experiments/ENCSR231XAP/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 Mint-ChIP-seq on human CD8-positive, alpha-beta memory T cell
experiment encode accession: ENCSR231XAP
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR128KDZ
encode release date: 2020-07-30
lab: Bradley Bernstein, Broad
library encode accession: ENCLB912NAN
fragmentation methods: none

value: CD8-positive, alpha-beta memory T cell

value: primary cell

value: supplied by Hafler lab as part of Encode4 project starting July2017

value: not collected

value: multiple sclerosis

value: Bradley Bernstein, Broad

value: ENCBS757PLC at ENCODE; https://www.encodeproject.org/ENCBS757PLC/


title: Control Mint-ChIP-seq from brain (ENCLB260OVL)

description:
https://www.encodeproject.org/experiments/ENCSR141MUD/
***************
biological replicate number: 3
technical replicate number: 1
description: Control Mint-ChIP-seq on human PGP1 derived brain organoid
experiment encode accession: ENCSR141MUD
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-07-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB260OVL

value: brain

value: organoid

value: brain organoids created by Arlotta lab using new protocol to create more reliable organoids.

value: 53 year

value: ENCBS524OMS at ENCODE; https://www.encodeproject.org/ENCBS524OMS/

value: Derived from ENCODE donor ENCDO336AAA; https://www.encodeproject.org/ENCDO336AAA/


title: Control Mint-ChIP-seq from brain (ENCLB415HIZ)

description:
https://www.encodeproject.org/experiments/ENCSR141MUD/
***************
biological replicate number: 2
technical replicate number: 2
description: Control Mint-ChIP-seq on human PGP1 derived brain organoid
experiment encode accession: ENCSR141MUD
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-07-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB415HIZ

value: male

value: adult

value: Paola Arlotta

value: ENCBS377FQM at ENCODE; https://www.encodeproject.org/ENCBS377FQM/


title: Mint-ChIP-seq from brain (ENCLB013SVH)

description:
https://www.encodeproject.org/experiments/ENCSR045KAM/
***************
biological replicate number: 3
technical replicate number: 2
description: H3K9me3 Mint-ChIP-seq on human H9 derived brain organoid
experiment encode accession: ENCSR045KAM
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR389BJR
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB013SVH
fragmentation methods: none

value: female

value: healthy

value: embryonic

value: 5 day

value: ENCBS598CLB at ENCODE; https://www.encodeproject.org/ENCBS598CLB/

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: Mint-ChIP-seq from activated CD8-positive, alpha-beta memory T cell (ENCLB815OEL)

description:
https://www.encodeproject.org/experiments/ENCSR976RWL/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac Mint-ChIP-seq of activated CD8-positive, alpha-beta T cell male adult (30 years) treated with 10 ng
experiment encode accession: ENCSR976RWL
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR466PQY
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB815OEL
fragmentation methods: none

value: primary cell

value: 30 year

value: Yijun Ruan, JAX

value: AllCells

value: treatment_term_id:UniProtKB:P60568; treatment_term_name:Interleukin-2; treatment_type:protein; treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS039WVH at ENCODE; https://www.encodeproject.org/ENCBS039WVH/

value: Derived from ENCODE donor ENCDO166AGR; https://www.encodeproject.org/ENCDO166AGR/


title: Mint-ChIP-seq from brain (ENCLB484BHD)

description:
https://www.encodeproject.org/experiments/ENCSR045KAM/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K9me3 Mint-ChIP-seq on human H9 derived brain organoid
experiment encode accession: ENCSR045KAM
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR389BJR
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB484BHD
fragmentation methods: none

value: brain

value: organoid

value: Bradley Bernstein, Broad

value: ENCBS358VQQ at ENCODE; https://www.encodeproject.org/ENCBS358VQQ/


title: Mint-ChIP-seq from CD8-positive, alpha-beta memory T cell (ENCLB656WFF)

description:
https://www.encodeproject.org/experiments/ENCSR973KLH/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 Mint-ChIP-seq on human CD8-positive, alpha-beta memory T cell
experiment encode accession: ENCSR973KLH
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR622ZKD
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB656WFF
fragmentation methods: none

source_name: Homo sapiens CD8-positive, alpha-beta memory T primary cell, preserved by cryopreservation

value: CD8-positive, alpha-beta memory T cell

value: CD8+ memory CD3+ CD4- CD8+ CD45RA- CD45RO+

value: not collected

value: unknown

value: David Hafler

value: ENCBS235RVH at ENCODE; https://www.encodeproject.org/ENCBS235RVH/

value: Derived from ENCODE donor ENCDO976NED; https://www.encodeproject.org/ENCDO976NED/


title: Control Mint-ChIP-seq from activated T-cell (ENCLB032THC)

description:
https://www.encodeproject.org/experiments/ENCSR975DSD/
***************
biological replicate number: 1
technical replicate number: 1
description: Control Mint-ChIP-seq of activated T-cell male adult (42 years)
experiment encode accession: ENCSR975DSD
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2021-04-28
lab: Bradley Bernstein, Broad
library encode accession: ENCLB032THC

source_name: Homo sapiens male adult (42 years) activated T-cell primary cell

value: activated T-cell

value: primary cell

value: male

value: adult

value: 42 year

value: John Stamatoyannopoulos, UW

value: ENCBS351GLT at ENCODE; https://www.encodeproject.org/ENCBS351GLT/

value: Derived from ENCODE donor ENCDO833KUM; https://www.encodeproject.org/ENCDO833KUM/


title: Control Mint-ChIP-seq from activated T-cell (ENCLB440XDU)

description:
https://www.encodeproject.org/experiments/ENCSR975DSD/
***************
biological replicate number: 1
technical replicate number: 2
description: Control Mint-ChIP-seq of activated T-cell male adult (42 years)
experiment encode accession: ENCSR975DSD
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2021-04-28
lab: Bradley Bernstein, Broad
library encode accession: ENCLB440XDU

value: AllCells


title: Mint-ChIP-seq from activated CD4 positive, naive alpha-beta T cell (ENCLB915WQZ)

description:
https://www.encodeproject.org/experiments/ENCSR865YWD/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27me3 Mint-ChIP-seq of activated CD4-positive, alpha-beta T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads
experiment encode accession: ENCSR865YWD
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR053AWV
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB915WQZ
fragmentation methods: none

value: 43 year

value: Yijun Ruan, JAX

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS212SYV at ENCODE; https://www.encodeproject.org/ENCBS212SYV/

value: Derived from ENCODE donor ENCDO791UJG; https://www.encodeproject.org/ENCDO791UJG/


title: Mint-ChIP-seq from brain (ENCLB615XUV)

description:
https://www.encodeproject.org/experiments/ENCSR045KAM/
***************
biological replicate number: 3
technical replicate number: 1
description: H3K9me3 Mint-ChIP-seq on human H9 derived brain organoid
experiment encode accession: ENCSR045KAM
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR389BJR
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB615XUV
fragmentation methods: none

value: brain

value: organoid

value: female

value: healthy

value: embryonic

value: 5 day

value: Bradley Bernstein, Broad

value: Paola Arlotta

value: ENCBS598CLB at ENCODE; https://www.encodeproject.org/ENCBS598CLB/

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: Mint-ChIP-seq from CD8-positive, alpha-beta memory T cell (ENCLB928EHD)

description:
https://www.encodeproject.org/experiments/ENCSR973KLH/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K36me3 Mint-ChIP-seq on human CD8-positive, alpha-beta memory T cell
experiment encode accession: ENCSR973KLH
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR622ZKD
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB928EHD
fragmentation methods: none

value: CD8-positive, alpha-beta memory T cell

value: primary cell

value: CD8+ memory CD3+ CD4- CD8+ CD45RA- CD45RO+

value: not collected

value: unknown

value: David Hafler

value: ENCBS235RVH at ENCODE; https://www.encodeproject.org/ENCBS235RVH/

value: Derived from ENCODE donor ENCDO976NED; https://www.encodeproject.org/ENCDO976NED/


title: Mint-ChIP-seq from activated CD4-positive, alpha-beta T cell (ENCLB494HLH)

description:
https://www.encodeproject.org/experiments/ENCSR969GTE/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR969GTE
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR674JPB
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB494HLH
fragmentation methods: none

source_name: Homo sapiens male adult (20 years) activated CD4-positive, alpha-beta T primary cell treated with anti-CD3 and anti-CD28 coated beads

value: male

value: adult

value: 20 year

value: Yijun Ruan, JAX

value: AllCells

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS896OLN at ENCODE; https://www.encodeproject.org/ENCBS896OLN/

value: Derived from ENCODE donor ENCDO394DKX; https://www.encodeproject.org/ENCDO394DKX/


title: Mint-ChIP-seq from IgD-negative memory B cell (ENCLB545WOC)

description:
https://www.encodeproject.org/experiments/ENCSR969UEM/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR969UEM
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR519VQC
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB545WOC
fragmentation methods: none

source_name: Homo sapiens IgD-negative memory B primary cell, preserved by cryopreservation

value: IgD-negative memory B cell

value: B memory CD3- CD14- CD19+ CD27+ IgD-

value: healthy

value: Bradley Bernstein, Broad

value: ENCBS318ZNB at ENCODE; https://www.encodeproject.org/ENCBS318ZNB/

value: Derived from ENCODE donor ENCDO922TOC; https://www.encodeproject.org/ENCDO922TOC/


title: Mint-ChIP-seq from CD8-positive, alpha-beta memory T cell (ENCLB118MVP)

description:
https://www.encodeproject.org/experiments/ENCSR861FEC/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR861FEC
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR231SVU
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB118MVP
fragmentation methods: none

source_name: Homo sapiens CD8-positive, alpha-beta memory T primary cell with multiple sclerosis, preserved by cryopreservation

value: CD8-positive, alpha-beta memory T cell

value: primary cell

value: CD8+ memory CD3+ CD4- CD8+ CD45RA- CD45RO+

value: not collected

value: multiple sclerosis

value: unknown

value: David Hafler

value: ENCBS347VRW at ENCODE; https://www.encodeproject.org/ENCBS347VRW/

value: Derived from ENCODE donor ENCDO157PKH; https://www.encodeproject.org/ENCDO157PKH/


title: Mint-ChIP-seq from H9 (ENCLB144ADL)

description:
https://www.encodeproject.org/experiments/ENCSR134OWL/
***************
biological replicate number: 3
technical replicate number: 1
description: H3K9me3 Mint-ChIP-seq on human H9
experiment encode accession: ENCSR134OWL
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR365EAV
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB144ADL
fragmentation methods: none

source_name: Homo sapiens H9 cell line

tag: line

value: cell line

value: female

value: embryonic

value: 5 day

value: Kevin Eggan and Ralda Nehme

value: ENCBS561LGY at ENCODE; https://www.encodeproject.org/ENCBS561LGY/

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: Mint-ChIP-seq from brain (ENCLB413JDL)

description:
https://www.encodeproject.org/experiments/ENCSR045KAM/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9me3 Mint-ChIP-seq on human H9 derived brain organoid
experiment encode accession: ENCSR045KAM
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR389BJR
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB413JDL
fragmentation methods: none

value: brain

value: organoid

value: healthy

value: Bradley Bernstein, Broad

value: Paola Arlotta

value: ENCBS358VQQ at ENCODE; https://www.encodeproject.org/ENCBS358VQQ/


title: Mint-ChIP-seq from activated CD8-positive, alpha-beta T cell (ENCLB362CHB)

description:
https://www.encodeproject.org/experiments/ENCSR958QJN/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR958QJN
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR741YCX
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB362CHB
fragmentation methods: none

source_name: Homo sapiens male adult (21 years) activated CD8-positive, alpha-beta T primary cell treated with anti-CD3 and anti-CD28 coated beads

value: primary cell

value: male

value: adult

value: 21 year

value: Yijun Ruan, JAX

value: AllCells

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS458XCC at ENCODE; https://www.encodeproject.org/ENCBS458XCC/

value: Derived from ENCODE donor ENCDO781BMZ; https://www.encodeproject.org/ENCDO781BMZ/


title: Mint-ChIP-seq from H9 (ENCLB320HIP)

description:
https://www.encodeproject.org/experiments/ENCSR134OWL/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9me3 Mint-ChIP-seq on human H9
experiment encode accession: ENCSR134OWL
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR365EAV
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB320HIP
fragmentation methods: none

value: cell line

value: female

value: embryonic

value: 5 day

value: Kevin Eggan and Ralda Nehme

value: ENCBS062ZAE at ENCODE; https://www.encodeproject.org/ENCBS062ZAE/


title: Mint-ChIP-seq from H9 (ENCLB730AXG)

description:
https://www.encodeproject.org/experiments/ENCSR134OWL/
***************
biological replicate number: 3
technical replicate number: 2
description: H3K9me3 Mint-ChIP-seq on human H9
experiment encode accession: ENCSR134OWL
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR365EAV
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB730AXG
fragmentation methods: none

value: healthy

value: Bradley Bernstein, Broad

value: ENCBS561LGY at ENCODE; https://www.encodeproject.org/ENCBS561LGY/

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: Mint-ChIP-seq from activated CD4-positive, alpha-beta T cell (ENCLB210TBU)

description:
https://www.encodeproject.org/experiments/ENCSR969GTE/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR969GTE
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR674JPB
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB210TBU
fragmentation methods: none

value: primary cell

value: male

value: adult

value: 20 year

value: ENCBS896OLN at ENCODE; https://www.encodeproject.org/ENCBS896OLN/

value: Derived from ENCODE donor ENCDO394DKX; https://www.encodeproject.org/ENCDO394DKX/


title: Mint-ChIP-seq from CD8-positive, alpha-beta memory T cell (ENCLB906UOT)

description:
https://www.encodeproject.org/experiments/ENCSR861FEC/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR861FEC
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR231SVU
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB906UOT
fragmentation methods: none

value: CD8-positive, alpha-beta memory T cell

value: CD8+ memory CD3+ CD4- CD8+ CD45RA- CD45RO+

value: not collected

value: multiple sclerosis

value: unknown

value: David Hafler

value: ENCBS347VRW at ENCODE; https://www.encodeproject.org/ENCBS347VRW/

value: Derived from ENCODE donor ENCDO157PKH; https://www.encodeproject.org/ENCDO157PKH/


title: Mint-ChIP-seq from H9 (ENCLB253GWE)

description:
https://www.encodeproject.org/experiments/ENCSR134OWL/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9me3 Mint-ChIP-seq on human H9
experiment encode accession: ENCSR134OWL
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR365EAV
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB253GWE
fragmentation methods: none

value: cell line

value: female

value: healthy

value: embryonic

value: 5 day

value: Bradley Bernstein, Broad

value: Kevin Eggan and Ralda Nehme

value: ENCBS161LPX at ENCODE; https://www.encodeproject.org/ENCBS161LPX/


title: Mint-ChIP-seq from CD4-positive, alpha-beta T cell (ENCLB511QRL)

description:
https://www.encodeproject.org/experiments/ENCSR855IYR/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K36me3 ChIP-seq on CD4-positive, alpha-beta T cell male adult (20 years)
experiment encode accession: ENCSR855IYR
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR774CGN
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB511QRL
fragmentation methods: none

source_name: Homo sapiens male adult (20 years) CD4-positive, alpha-beta T primary cell

value: CD4-positive, alpha-beta T cell

value: primary cell

value: male

value: adult

value: 20 year

value: Yijun Ruan, JAX

value: AllCells

value: ENCBS151VTD at ENCODE; https://www.encodeproject.org/ENCBS151VTD/

value: Derived from ENCODE donor ENCDO394DKX; https://www.encodeproject.org/ENCDO394DKX/


title: Mint-ChIP-seq from H9 (ENCLB077ZQH)

description:
https://www.encodeproject.org/experiments/ENCSR134OWL/
***************
biological replicate number: 2
technical replicate number: 2
description: H3K9me3 Mint-ChIP-seq on human H9
experiment encode accession: ENCSR134OWL
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR365EAV
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB077ZQH
fragmentation methods: none

value: cell line

value: ENCBS062ZAE at ENCODE; https://www.encodeproject.org/ENCBS062ZAE/

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: Mint-ChIP-seq from H9 (ENCLB449HEW)

description:
https://www.encodeproject.org/experiments/ENCSR134OWL/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K9me3 Mint-ChIP-seq on human H9
experiment encode accession: ENCSR134OWL
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR365EAV
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB449HEW
fragmentation methods: none

value: female

value: healthy

value: embryonic


title: Mint-ChIP-seq from activated CD8-positive, alpha-beta T cell (ENCLB140ZEB)

description:
https://www.encodeproject.org/experiments/ENCSR854MXR/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K36me3 Mint-ChIP-seq of activated CD8-positive, alpha-beta T cell male adult (21 years) treated with 10 ng
experiment encode accession: ENCSR854MXR
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR651JZJ
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB140ZEB
fragmentation methods: none

source_name: Homo sapiens male adult (21 years) activated CD8-positive, alpha-beta T primary cell treated with 10 ng/mL Interleukin-2 , anti-CD3 and anti-CD28 coated beads

value: 21 year

value: treatment_term_id:UniProtKB:P60568; treatment_term_name:Interleukin-2; treatment_type:protein; treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS387CPR at ENCODE; https://www.encodeproject.org/ENCBS387CPR/

value: Derived from ENCODE donor ENCDO781BMZ; https://www.encodeproject.org/ENCDO781BMZ/


title: Mint-ChIP-seq from naive thymus-derived CD4-positive, alpha-beta T cell (ENCLB473WLI)

description:
https://www.encodeproject.org/experiments/ENCSR043JIA/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 Mint-ChIP-seq on human naive thymus-derived CD4-positive, alpha-beta T cell
experiment encode accession: ENCSR043JIA
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR128CIX
encode release date: 2020-07-30
lab: Bradley Bernstein, Broad
library encode accession: ENCLB473WLI

source_name: Homo sapiens naive thymus-derived CD4-positive, alpha-beta T primary cell with multiple sclerosis

value: primary cell

value: supplied by Hafler lab as part of Encode4 project starting July2017

value: not collected

value: multiple sclerosis

value: unknown

value: Bradley Bernstein, Broad

value: David Hafler

value: ENCBS040CMJ at ENCODE; https://www.encodeproject.org/ENCBS040CMJ/

value: Derived from ENCODE donor ENCDO553CCA; https://www.encodeproject.org/ENCDO553CCA/


title: Mint-ChIP-seq from naive thymus-derived CD4-positive, alpha-beta T cell (ENCLB649KEZ)

description:
https://www.encodeproject.org/experiments/ENCSR043JIA/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me1 Mint-ChIP-seq on human naive thymus-derived CD4-positive, alpha-beta T cell
experiment encode accession: ENCSR043JIA
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR128CIX
encode release date: 2020-07-30
lab: Bradley Bernstein, Broad
library encode accession: ENCLB649KEZ


title: Mint-ChIP-seq from activated CD8-positive, alpha-beta T cell (ENCLB719ACB)

description:
https://www.encodeproject.org/experiments/ENCSR854MXR/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 Mint-ChIP-seq of activated CD8-positive, alpha-beta T cell male adult (21 years) treated with 10 ng
experiment encode accession: ENCSR854MXR
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR651JZJ
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB719ACB
fragmentation methods: none

value: male

value: adult

value: Yijun Ruan, JAX

value: AllCells


title: Mint-ChIP-seq from activated CD8-positive, alpha-beta T cell (ENCLB799DZK)

description:
https://www.encodeproject.org/experiments/ENCSR958QJN/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR958QJN
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR741YCX
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB799DZK
fragmentation methods: none

value: 21 year

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS458XCC at ENCODE; https://www.encodeproject.org/ENCBS458XCC/


title: Mint-ChIP-seq from CD4-positive naive resting alpha-beta T cell (ENCLB789GUB)

description:
https://www.encodeproject.org/experiments/ENCSR953RGF/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27me3 ChIP-seq on CD4-positive naive resting alpha-beta T cell male adult (43 years)
experiment encode accession: ENCSR953RGF
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR692OOM
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB789GUB
fragmentation methods: none

source_name: Homo sapiens male adult (43 years) CD4-positive naive resting alpha-beta T primary cell

value: 43 year

value: ENCBS527XSO at ENCODE; https://www.encodeproject.org/ENCBS527XSO/

value: Derived from ENCODE donor ENCDO791UJG; https://www.encodeproject.org/ENCDO791UJG/


title: Mint-ChIP-seq from CD4-positive, alpha-beta memory T cell (ENCLB809ITH)

description:
https://www.encodeproject.org/experiments/ENCSR953STZ/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR953STZ
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR131SAQ
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB809ITH
fragmentation methods: none

source_name: Homo sapiens CD4-positive, alpha-beta memory T primary cell with multiple sclerosis, preserved by cryopreservation

value: CD4-positive, alpha-beta memory T cell

value: primary cell

value: CD4+ memory CD3+ CD4+ CD8- CD45RA- CD45RO+ nonTreg

value: not collected

value: ENCBS702KJW at ENCODE; https://www.encodeproject.org/ENCBS702KJW/

value: Derived from ENCODE donor ENCDO157PKH; https://www.encodeproject.org/ENCDO157PKH/


title: Mint-ChIP-seq from CD4-positive naive resting alpha-beta T cell (ENCLB332WHM)

description:
https://www.encodeproject.org/experiments/ENCSR955IFA/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 ChIP-seq on CD4-positive naive resting alpha-beta T cell male adult (43 years)
experiment encode accession: ENCSR955IFA
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR692OOM
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB332WHM
fragmentation methods: none


title: Mint-ChIP-seq from CD4-positive naive resting alpha-beta T cell (ENCLB307SZF)

description:
https://www.encodeproject.org/experiments/ENCSR955IFA/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K36me3 ChIP-seq on CD4-positive naive resting alpha-beta T cell male adult (43 years)
experiment encode accession: ENCSR955IFA
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR692OOM
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB307SZF
fragmentation methods: none


title: Mint-ChIP-seq from CD4-positive, alpha-beta memory T cell (ENCLB808NLR)

description:
https://www.encodeproject.org/experiments/ENCSR036YVP/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 Mint-ChIP-seq on human CD4-positive, alpha-beta memory T cell
experiment encode accession: ENCSR036YVP
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR127UUU
encode release date: 2020-07-30
lab: Bradley Bernstein, Broad
library encode accession: ENCLB808NLR
fragmentation methods: none

source_name: Homo sapiens CD4-positive, alpha-beta memory T primary cell with multiple sclerosis

value: supplied by Hafler lab as part of Encode4 project starting July2017

value: multiple sclerosis

value: unknown

value: Bradley Bernstein, Broad

value: David Hafler

value: ENCBS437FZY at ENCODE; https://www.encodeproject.org/ENCBS437FZY/

value: Derived from ENCODE donor ENCDO553CCA; https://www.encodeproject.org/ENCDO553CCA/


title: Mint-ChIP-seq from IgD-negative memory B cell (ENCLB380TRR)

description:
https://www.encodeproject.org/experiments/ENCSR969UEM/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR969UEM
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR519VQC
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB380TRR
fragmentation methods: none

value: IgD-negative memory B cell

value: B memory CD3- CD14- CD19+ CD27+ IgD-

value: healthy

value: ENCBS318ZNB at ENCODE; https://www.encodeproject.org/ENCBS318ZNB/

value: Derived from ENCODE donor ENCDO922TOC; https://www.encodeproject.org/ENCDO922TOC/


title: Mint-ChIP-seq from CD4-positive, alpha-beta memory T cell (ENCLB935BQK)

description:
https://www.encodeproject.org/experiments/ENCSR953STZ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR953STZ
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR131SAQ
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB935BQK
fragmentation methods: none

value: CD4-positive, alpha-beta memory T cell

value: primary cell


title: Mint-ChIP-seq from CD4-positive, alpha-beta T cell (ENCLB466OZD)

description:
https://www.encodeproject.org/experiments/ENCSR855IYR/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 ChIP-seq on CD4-positive, alpha-beta T cell male adult (20 years)
experiment encode accession: ENCSR855IYR
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR774CGN
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB466OZD
fragmentation methods: none

value: CD4-positive, alpha-beta T cell

value: male

value: adult

value: 20 year

value: Yijun Ruan, JAX

value: AllCells

value: ENCBS151VTD at ENCODE; https://www.encodeproject.org/ENCBS151VTD/

value: Derived from ENCODE donor ENCDO394DKX; https://www.encodeproject.org/ENCDO394DKX/


title: Mint-ChIP-seq from CD4-positive, alpha-beta memory T cell (ENCLB335HYY)

description:
https://www.encodeproject.org/experiments/ENCSR036YVP/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me1 Mint-ChIP-seq on human CD4-positive, alpha-beta memory T cell
experiment encode accession: ENCSR036YVP
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR127UUU
encode release date: 2020-07-30
lab: Bradley Bernstein, Broad
library encode accession: ENCLB335HYY
fragmentation methods: none

value: supplied by Hafler lab as part of Encode4 project starting July2017

value: not collected

value: multiple sclerosis

value: unknown

value: Bradley Bernstein, Broad

value: David Hafler

value: ENCBS437FZY at ENCODE; https://www.encodeproject.org/ENCBS437FZY/


title: Mint-ChIP-seq from brain (ENCLB538RXP)

description:
https://www.encodeproject.org/experiments/ENCSR217AJC/
***************
biological replicate number: 3
technical replicate number: 1
description: H3K27ac Mint-ChIP-seq on human H9 derived brain organoid
experiment encode accession: ENCSR217AJC
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR389BJR
encode release date: 2020-07-30
lab: Bradley Bernstein, Broad
library encode accession: ENCLB538RXP
fragmentation methods: none

value: brain

value: organoid

value: female

value: healthy

value: embryonic

value: 5 day

value: Paola Arlotta

value: ENCBS598CLB at ENCODE; https://www.encodeproject.org/ENCBS598CLB/

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: Mint-ChIP-seq from CD4-positive naive resting alpha-beta T cell (ENCLB821ENO)

description:
https://www.encodeproject.org/experiments/ENCSR953RGF/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 ChIP-seq on CD4-positive naive resting alpha-beta T cell male adult (43 years)
experiment encode accession: ENCSR953RGF
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR692OOM
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB821ENO
fragmentation methods: none

value: primary cell

value: male

value: adult

value: 43 year

value: Yijun Ruan, JAX

value: AllCells

value: ENCBS527XSO at ENCODE; https://www.encodeproject.org/ENCBS527XSO/

value: Derived from ENCODE donor ENCDO791UJG; https://www.encodeproject.org/ENCDO791UJG/


title: Mint-ChIP-seq from brain (ENCLB181ELQ)

description:
https://www.encodeproject.org/experiments/ENCSR217AJC/
***************
biological replicate number: 3
technical replicate number: 2
description: H3K27ac Mint-ChIP-seq on human H9 derived brain organoid
experiment encode accession: ENCSR217AJC
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR389BJR
encode release date: 2020-07-30
lab: Bradley Bernstein, Broad
library encode accession: ENCLB181ELQ
fragmentation methods: none

value: brain

value: Bradley Bernstein, Broad


title: Mint-ChIP-seq from activated CD4 positive, naive alpha-beta T cell (ENCLB676RBV)

description:
https://www.encodeproject.org/experiments/ENCSR845GYI/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac Mint-ChIP-seq of activated CD4-positive, alpha-beta T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads
experiment encode accession: ENCSR845GYI
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR053AWV
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB676RBV
fragmentation methods: none

source_name: Homo sapiens male adult (43 years) activated CD4 positive, naive alpha-beta T primary cell treated with anti-CD3 and anti-CD28 coated beads

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS212SYV at ENCODE; https://www.encodeproject.org/ENCBS212SYV/


title: Mint-ChIP-seq from brain (ENCLB316FHD)

description:
https://www.encodeproject.org/experiments/ENCSR217AJC/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac Mint-ChIP-seq on human H9 derived brain organoid
experiment encode accession: ENCSR217AJC
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR389BJR
encode release date: 2020-07-30
lab: Bradley Bernstein, Broad
library encode accession: ENCLB316FHD
fragmentation methods: none

value: organoid

value: female

value: healthy

value: embryonic

value: ENCBS615FKW at ENCODE; https://www.encodeproject.org/ENCBS615FKW/


title: Mint-ChIP-seq from activated CD4-positive, alpha-beta T cell (ENCLB143YHN)

description:
https://www.encodeproject.org/experiments/ENCSR945GCR/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27me3 Mint-ChIP-seq of activated CD4-positive, alpha-beta T cell male adult (20 years) treated with 10 ng
experiment encode accession: ENCSR945GCR
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR779CPT
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB143YHN
fragmentation methods: none

source_name: Homo sapiens male adult (20 years) activated CD4-positive, alpha-beta T primary cell treated with 10 ng/mL Interleukin-2 , anti-CD3 and anti-CD28 coated beads

value: primary cell

value: 20 year

value: treatment_term_id:UniProtKB:P60568; treatment_term_name:Interleukin-2; treatment_type:protein; treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS736STX at ENCODE; https://www.encodeproject.org/ENCBS736STX/

value: Derived from ENCODE donor ENCDO394DKX; https://www.encodeproject.org/ENCDO394DKX/


title: Mint-ChIP-seq from brain (ENCLB026TNB)

description:
https://www.encodeproject.org/experiments/ENCSR217AJC/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K27ac Mint-ChIP-seq on human H9 derived brain organoid
experiment encode accession: ENCSR217AJC
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR389BJR
encode release date: 2020-07-30
lab: Bradley Bernstein, Broad
library encode accession: ENCLB026TNB
fragmentation methods: none

source_name: Homo sapiens female embryo (5 days) brain organoid, 180 days post differentiation

value: 5 day

value: Paola Arlotta

value: ENCBS358VQQ at ENCODE; https://www.encodeproject.org/ENCBS358VQQ/

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: Mint-ChIP-seq from brain (ENCLB072NJI)

description:
https://www.encodeproject.org/experiments/ENCSR217AJC/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac Mint-ChIP-seq on human H9 derived brain organoid
experiment encode accession: ENCSR217AJC
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR389BJR
encode release date: 2020-07-30
lab: Bradley Bernstein, Broad
library encode accession: ENCLB072NJI
fragmentation methods: none

value: brain

value: Bradley Bernstein, Broad


title: Mint-ChIP-seq from activated CD4 positive, naive alpha-beta T cell (ENCLB892HSM)

description:
https://www.encodeproject.org/experiments/ENCSR845GYI/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac Mint-ChIP-seq of activated CD4-positive, alpha-beta T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads
experiment encode accession: ENCSR845GYI
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR053AWV
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB892HSM
fragmentation methods: none

value: male

value: adult

value: 43 year

value: Yijun Ruan, JAX

value: AllCells

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS212SYV at ENCODE; https://www.encodeproject.org/ENCBS212SYV/

value: Derived from ENCODE donor ENCDO791UJG; https://www.encodeproject.org/ENCDO791UJG/


title: Mint-ChIP-seq from brain (ENCLB132HQK)

description:
https://www.encodeproject.org/experiments/ENCSR217AJC/
***************
biological replicate number: 2
technical replicate number: 2
description: H3K27ac Mint-ChIP-seq on human H9 derived brain organoid
experiment encode accession: ENCSR217AJC
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR389BJR
encode release date: 2020-07-30
lab: Bradley Bernstein, Broad
library encode accession: ENCLB132HQK
fragmentation methods: none

value: organoid

value: female

value: healthy

value: embryonic


title: Mint-ChIP-seq from activated CD4-positive, alpha-beta T cell (ENCLB097VDU)

description:
https://www.encodeproject.org/experiments/ENCSR945GCR/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 Mint-ChIP-seq of activated CD4-positive, alpha-beta T cell male adult (20 years) treated with 10 ng
experiment encode accession: ENCSR945GCR
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR779CPT
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB097VDU
fragmentation methods: none

value: primary cell

value: 20 year

value: treatment_term_id:UniProtKB:P60568; treatment_term_name:Interleukin-2; treatment_type:protein; treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS736STX at ENCODE; https://www.encodeproject.org/ENCBS736STX/

value: Derived from ENCODE donor ENCDO394DKX; https://www.encodeproject.org/ENCDO394DKX/


title: Mint-ChIP-seq from type B pancreatic cell (ENCLB607FXL)

description:
https://www.encodeproject.org/experiments/ENCSR943STF/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR943STF
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR380ZKL
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB607FXL
fragmentation methods: none

source_name: Homo sapiens female embryo (5 days) type B pancreatic in vitro differentiated cells originated from type B pancreatic cell

value: type B pancreatic cell

value: in vitro differentiated cells

value: WA09 derived insulin producing beta-like cells

value: 5 day

value: Bradley Bernstein, Broad

value: SESCC

value: ENCBS779FCS at ENCODE; https://www.encodeproject.org/ENCBS779FCS/

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: Mint-ChIP-seq from type B pancreatic cell (ENCLB937LSQ)

description:
https://www.encodeproject.org/experiments/ENCSR943STF/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR943STF
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR380ZKL
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB937LSQ
fragmentation methods: none


title: Mint-ChIP-seq from type B pancreatic cell (ENCLB297GOB)

description:
https://www.encodeproject.org/experiments/ENCSR943STF/
***************
biological replicate number: 2
technical replicate number: 2
description:
experiment encode accession: ENCSR943STF
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR380ZKL
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB297GOB

value: ENCBS251SEQ at ENCODE; https://www.encodeproject.org/ENCBS251SEQ/


title: Mint-ChIP-seq from astrocyte (ENCLB310NOH)

description:
https://www.encodeproject.org/experiments/ENCSR941HLS/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 Mint-ChIP-seq on human PGP1 derived astrocyte
experiment encode accession: ENCSR941HLS
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR731CEI
encode release date: 2021-05-18
lab: Bradley Bernstein, Broad
library encode accession: ENCLB310NOH
fragmentation methods: none

source_name: Homo sapiens male adult (53 years) astrocyte in vitro differentiated cells originated from astrocyte, preserved by cryopreservation

value: astrocyte

value: PGP1 derived astrocytes

value: male

value: adult

value: 53 year

value: George Church

value: ENCBS534DJA at ENCODE; https://www.encodeproject.org/ENCBS534DJA/

value: Derived from ENCODE donor ENCDO336AAA; https://www.encodeproject.org/ENCDO336AAA/


title: Mint-ChIP-seq from type B pancreatic cell (ENCLB447MOM)

description:
https://www.encodeproject.org/experiments/ENCSR943STF/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR943STF
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR380ZKL
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB447MOM

value: type B pancreatic cell

value: female

value: healthy

value: embryonic


title: Mint-ChIP-seq from naive thymus-derived CD8-positive, alpha-beta T cell (ENCLB686UVX)

description:
https://www.encodeproject.org/experiments/ENCSR940PHE/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me1 Mint-ChIP-seq on human naive thymus-derived CD8-positive, alpha-beta T cell
experiment encode accession: ENCSR940PHE
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR034MTZ
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB686UVX
fragmentation methods: none
instrument models: Illumina NextSeq 500,Illumina HiSeq 2500,Illumina NovaSeq 6000

source_name: Homo sapiens naive thymus-derived CD8-positive, alpha-beta T primary cell with multiple sclerosis, preserved by cryopreservation

value: primary cell

value: CD8+ naive CD3+ CD4- CD8+ CD45RA+ CD45RO-

value: not collected

value: multiple sclerosis

value: unknown

value: Bradley Bernstein, Broad

value: David Hafler

value: ENCBS512HTQ at ENCODE; https://www.encodeproject.org/ENCBS512HTQ/

value: Derived from ENCODE donor ENCDO187BUH; https://www.encodeproject.org/ENCDO187BUH/


title: Control Mint-ChIP-seq from naive thymus-derived CD4-positive, alpha-beta T cell (ENCLB832CWK)

description:
https://www.encodeproject.org/experiments/ENCSR034OUM/
***************
biological replicate number: 1
technical replicate number: 2
description: Control Mint-ChIP-seq on human naive thymus-derived CD4-positive, alpha-beta T cell
experiment encode accession: ENCSR034OUM
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-07-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB832CWK

source_name: Homo sapiens naive thymus-derived CD4-positive, alpha-beta T primary cell

value: supplied by Hafler lab as part of Encode4 project starting July2017

value: ENCBS928WKW at ENCODE; https://www.encodeproject.org/ENCBS928WKW/

value: Derived from ENCODE donor ENCDO258PRN; https://www.encodeproject.org/ENCDO258PRN/


title: Control Mint-ChIP-seq from CD8-positive, alpha-beta memory T cell (ENCLB941SAK)

description:
https://www.encodeproject.org/experiments/ENCSR128KDZ/
***************
biological replicate number: 1
technical replicate number: 2
description: Control Mint-ChIP-seq on human CD8-positive, alpha-beta memory T cell
experiment encode accession: ENCSR128KDZ
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-07-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB941SAK

source_name: Homo sapiens CD8-positive, alpha-beta memory T primary cell with multiple sclerosis

value: CD8-positive, alpha-beta memory T cell

value: ENCBS757PLC at ENCODE; https://www.encodeproject.org/ENCBS757PLC/

value: Derived from ENCODE donor ENCDO553CCA; https://www.encodeproject.org/ENCDO553CCA/


title: Control Mint-ChIP-seq from naive thymus-derived CD4-positive, alpha-beta T cell (ENCLB394MII)

description:
https://www.encodeproject.org/experiments/ENCSR128CIX/
***************
biological replicate number: 1
technical replicate number: 2
description: Control Mint-ChIP-seq on human naive thymus-derived CD4-positive, alpha-beta T cell
experiment encode accession: ENCSR128CIX
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-07-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB394MII

value: ENCBS040CMJ at ENCODE; https://www.encodeproject.org/ENCBS040CMJ/


title: Control Mint-ChIP-seq from CD8-positive, alpha-beta memory T cell (ENCLB003FLV)

description:
https://www.encodeproject.org/experiments/ENCSR128KDZ/
***************
biological replicate number: 1
technical replicate number: 1
description: Control Mint-ChIP-seq on human CD8-positive, alpha-beta memory T cell
experiment encode accession: ENCSR128KDZ
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-07-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB003FLV


title: Control Mint-ChIP-seq from naive thymus-derived CD4-positive, alpha-beta T cell (ENCLB842DJI)

description:
https://www.encodeproject.org/experiments/ENCSR034OUM/
***************
biological replicate number: 1
technical replicate number: 1
description: Control Mint-ChIP-seq on human naive thymus-derived CD4-positive, alpha-beta T cell
experiment encode accession: ENCSR034OUM
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-07-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB842DJI

value: healthy


title: Control Mint-ChIP-seq from naive thymus-derived CD4-positive, alpha-beta T cell (ENCLB345IVG)

description:
https://www.encodeproject.org/experiments/ENCSR128CIX/
***************
biological replicate number: 1
technical replicate number: 1
description: Control Mint-ChIP-seq on human naive thymus-derived CD4-positive, alpha-beta T cell
experiment encode accession: ENCSR128CIX
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-07-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB345IVG

value: primary cell


title: Control Mint-ChIP-seq from CD4-positive, alpha-beta memory T cell (ENCLB374LXP)

description:
https://www.encodeproject.org/experiments/ENCSR127UUU/
***************
biological replicate number: 1
technical replicate number: 2
description: Control Mint-ChIP-seq on human CD4-positive, alpha-beta memory T cell
experiment encode accession: ENCSR127UUU
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-07-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB374LXP

value: CD4-positive, alpha-beta memory T cell

value: ENCBS437FZY at ENCODE; https://www.encodeproject.org/ENCBS437FZY/


title: Control Mint-ChIP-seq from CD4-positive, alpha-beta memory T cell (ENCLB192EFL)

description:
https://www.encodeproject.org/experiments/ENCSR127UUU/
***************
biological replicate number: 1
technical replicate number: 1
description: Control Mint-ChIP-seq on human CD4-positive, alpha-beta memory T cell
experiment encode accession: ENCSR127UUU
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-07-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB192EFL

value: not collected

value: multiple sclerosis


title: Mint-ChIP-seq from T-cell (ENCLB124DLV)

description:
https://www.encodeproject.org/experiments/ENCSR833OER/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac ChIP-seq on T-cell male adult (38 years)
experiment encode accession: ENCSR833OER
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR203XDG
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB124DLV
fragmentation methods: none

source_name: Homo sapiens male adult (38 years) T-cell primary cell

value: T-cell

value: CD3+ unactivated cells from Stam Lab at Altius.

value: male

value: adult

value: 38 year

value: Bradley Bernstein, Broad

value: John Stamatoyannopoulos

value: ENCBS059XUY at ENCODE; https://www.encodeproject.org/ENCBS059XUY/

value: Derived from ENCODE donor ENCDO923WRX; https://www.encodeproject.org/ENCDO923WRX/


title: Mint-ChIP-seq from brain (ENCLB153UMM)

description:
https://www.encodeproject.org/experiments/ENCSR127HNP/
***************
biological replicate number: 3
technical replicate number: 1
description: H3K27me3 Mint-ChIP-seq on human PGP1 derived brain organoid
experiment encode accession: ENCSR127HNP
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR106WDX
encode release date: 2020-07-30
lab: Bradley Bernstein, Broad
library encode accession: ENCLB153UMM
fragmentation methods: none

source_name: Homo sapiens male adult (53 years) brain organoid, 180 days post differentiation

value: brain

value: organoid

value: brain organoids created by Arlotta lab using new protocol to create more reliable organoids.

value: 53 year

value: Paola Arlotta

value: ENCBS412HPI at ENCODE; https://www.encodeproject.org/ENCBS412HPI/

value: Derived from ENCODE donor ENCDO336AAA; https://www.encodeproject.org/ENCDO336AAA/


title: Mint-ChIP-seq from brain (ENCLB528QNN)

description:
https://www.encodeproject.org/experiments/ENCSR127HNP/
***************
biological replicate number: 3
technical replicate number: 2
description: H3K27me3 Mint-ChIP-seq on human PGP1 derived brain organoid
experiment encode accession: ENCSR127HNP
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR106WDX
encode release date: 2020-07-30
lab: Bradley Bernstein, Broad
library encode accession: ENCLB528QNN
fragmentation methods: none


title: Mint-ChIP-seq from astrocyte (ENCLB425JIV)

description:
https://www.encodeproject.org/experiments/ENCSR835CSP/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9me3 Mint-ChIP-seq on human PGP1 derived astrocyte
experiment encode accession: ENCSR835CSP
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR731CEI
encode release date: 2021-05-18
lab: Bradley Bernstein, Broad
library encode accession: ENCLB425JIV
fragmentation methods: none

value: astrocyte

value: in vitro differentiated cells

value: PGP1 derived astrocytes

value: George Church

value: ENCBS534DJA at ENCODE; https://www.encodeproject.org/ENCBS534DJA/


title: Mint-ChIP-seq from naive B cell (ENCLB237QDY)

description:
https://www.encodeproject.org/experiments/ENCSR935ULD/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 Mint-ChIP-seq on human naive B cell
experiment encode accession: ENCSR935ULD
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR499CKV
encode release date: 2020-09-05
lab: Bradley Bernstein, Broad
library encode accession: ENCLB237QDY
fragmentation methods: none
instrument models: Illumina NextSeq 500,Illumina HiSeq 2500,Illumina NovaSeq 6000

source_name: Homo sapiens naive B primary cell, preserved by cryopreservation

value: naive B cell

value: primary cell

value: B naive CD3- CD14- CD19+ CD27- IgD+

value: not collected

value: healthy

value: unknown

value: David Hafler

value: ENCBS644KFM at ENCODE; https://www.encodeproject.org/ENCBS644KFM/

value: Derived from ENCODE donor ENCDO976NED; https://www.encodeproject.org/ENCDO976NED/


title: Mint-ChIP-seq from T-cell (ENCLB760TSH)

description:
https://www.encodeproject.org/experiments/ENCSR833OER/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on T-cell male adult (38 years)
experiment encode accession: ENCSR833OER
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR203XDG
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB760TSH
fragmentation methods: none

value: T-cell

value: CD3+ unactivated cells from Stam Lab at Altius.

value: male

value: adult

value: 38 year

value: Bradley Bernstein, Broad

value: John Stamatoyannopoulos

value: ENCBS059XUY at ENCODE; https://www.encodeproject.org/ENCBS059XUY/

value: Derived from ENCODE donor ENCDO923WRX; https://www.encodeproject.org/ENCDO923WRX/


title: Mint-ChIP-seq from brain (ENCLB658OBA)

description:
https://www.encodeproject.org/experiments/ENCSR127HNP/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27me3 Mint-ChIP-seq on human PGP1 derived brain organoid
experiment encode accession: ENCSR127HNP
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR106WDX
encode release date: 2020-07-30
lab: Bradley Bernstein, Broad
library encode accession: ENCLB658OBA
fragmentation methods: none

value: brain

value: organoid

value: brain organoids created by Arlotta lab using new protocol to create more reliable organoids.

value: 53 year

value: Paola Arlotta

value: ENCBS344QAP at ENCODE; https://www.encodeproject.org/ENCBS344QAP/

value: Derived from ENCODE donor ENCDO336AAA; https://www.encodeproject.org/ENCDO336AAA/


title: Mint-ChIP-seq from CD4-positive, alpha-beta T cell (ENCLB368CYA)

description:
https://www.encodeproject.org/experiments/ENCSR833DCI/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 ChIP-seq on CD4-positive, alpha-beta T cell male adult (20 years)
experiment encode accession: ENCSR833DCI
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR774CGN
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB368CYA
fragmentation methods: none

source_name: Homo sapiens male adult (20 years) CD4-positive, alpha-beta T primary cell

value: CD4-positive, alpha-beta T cell

value: primary cell

value: 20 year

value: Yijun Ruan, JAX

value: AllCells

value: ENCBS151VTD at ENCODE; https://www.encodeproject.org/ENCBS151VTD/

value: Derived from ENCODE donor ENCDO394DKX; https://www.encodeproject.org/ENCDO394DKX/


title: Mint-ChIP-seq from naive B cell (ENCLB199PUM)

description:
https://www.encodeproject.org/experiments/ENCSR935ULD/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K36me3 Mint-ChIP-seq on human naive B cell
experiment encode accession: ENCSR935ULD
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR499CKV
encode release date: 2020-09-05
lab: Bradley Bernstein, Broad
library encode accession: ENCLB199PUM
fragmentation methods: none
instrument models: Illumina NextSeq 500,Illumina NovaSeq 6000,Illumina HiSeq 2500

value: naive B cell

value: B naive CD3- CD14- CD19+ CD27- IgD+

value: not collected

value: healthy

value: unknown

value: Bradley Bernstein, Broad

value: David Hafler

value: ENCBS644KFM at ENCODE; https://www.encodeproject.org/ENCBS644KFM/

value: Derived from ENCODE donor ENCDO976NED; https://www.encodeproject.org/ENCDO976NED/


title: Mint-ChIP-seq from astrocyte (ENCLB472HQK)

description:
https://www.encodeproject.org/experiments/ENCSR941HLS/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me1 Mint-ChIP-seq on human PGP1 derived astrocyte
experiment encode accession: ENCSR941HLS
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR731CEI
encode release date: 2021-05-18
lab: Bradley Bernstein, Broad
library encode accession: ENCLB472HQK
fragmentation methods: none

value: astrocyte

value: in vitro differentiated cells

value: PGP1 derived astrocytes

value: male

value: adult

value: 53 year

value: George Church

value: ENCBS534DJA at ENCODE; https://www.encodeproject.org/ENCBS534DJA/

value: Derived from ENCODE donor ENCDO336AAA; https://www.encodeproject.org/ENCDO336AAA/


title: Mint-ChIP-seq from IgD-negative memory B cell (ENCLB041SUM)

description:
https://www.encodeproject.org/experiments/ENCSR831AXK/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR831AXK
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR519VQC
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB041SUM
fragmentation methods: none

source_name: Homo sapiens IgD-negative memory B primary cell, preserved by cryopreservation

value: IgD-negative memory B cell

value: primary cell

value: B memory CD3- CD14- CD19+ CD27+ IgD-

value: ENCBS318ZNB at ENCODE; https://www.encodeproject.org/ENCBS318ZNB/

value: Derived from ENCODE donor ENCDO922TOC; https://www.encodeproject.org/ENCDO922TOC/


title: Mint-ChIP-seq from brain (ENCLB605NKV)

description:
https://www.encodeproject.org/experiments/ENCSR127HNP/
***************
biological replicate number: 2
technical replicate number: 2
description: H3K27me3 Mint-ChIP-seq on human PGP1 derived brain organoid
experiment encode accession: ENCSR127HNP
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR106WDX
encode release date: 2020-07-30
lab: Bradley Bernstein, Broad
library encode accession: ENCLB605NKV
fragmentation methods: none

value: brain

value: organoid

value: brain organoids created by Arlotta lab using new protocol to create more reliable organoids.

value: Bradley Bernstein, Broad

value: Paola Arlotta

value: ENCBS252LAB at ENCODE; https://www.encodeproject.org/ENCBS252LAB/


title: Mint-ChIP-seq from brain (ENCLB008HID)

description:
https://www.encodeproject.org/experiments/ENCSR127HNP/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 Mint-ChIP-seq on human PGP1 derived brain organoid
experiment encode accession: ENCSR127HNP
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR106WDX
encode release date: 2020-07-30
lab: Bradley Bernstein, Broad
library encode accession: ENCLB008HID
fragmentation methods: none

value: male

value: ENCBS344QAP at ENCODE; https://www.encodeproject.org/ENCBS344QAP/


title: Mint-ChIP-seq from naive thymus-derived CD8-positive, alpha-beta T cell (ENCLB433MTR)

description:
https://www.encodeproject.org/experiments/ENCSR216ZVA/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 Mint-ChIP-seq on human naive thymus-derived CD8-positive, alpha-beta T cell
experiment encode accession: ENCSR216ZVA
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR243EIU
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB433MTR

source_name: Homo sapiens naive thymus-derived CD8-positive, alpha-beta T primary cell with multiple sclerosis

value: supplied by Hafler lab as part of Encode4 project starting July2017

value: not collected

value: multiple sclerosis

value: unknown

value: David Hafler

value: ENCBS771DND at ENCODE; https://www.encodeproject.org/ENCBS771DND/

value: Derived from ENCODE donor ENCDO553CCA; https://www.encodeproject.org/ENCDO553CCA/


title: Mint-ChIP-seq from naive thymus-derived CD8-positive, alpha-beta T cell (ENCLB544HJA)

description:
https://www.encodeproject.org/experiments/ENCSR940PHE/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 Mint-ChIP-seq on human naive thymus-derived CD8-positive, alpha-beta T cell
experiment encode accession: ENCSR940PHE
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR034MTZ
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB544HJA
fragmentation methods: none
instrument models: Illumina NextSeq 500,Illumina HiSeq 2500,Illumina NovaSeq 6000

value: primary cell

value: CD8+ naive CD3+ CD4- CD8+ CD45RA+ CD45RO-

value: ENCBS512HTQ at ENCODE; https://www.encodeproject.org/ENCBS512HTQ/

value: Derived from ENCODE donor ENCDO187BUH; https://www.encodeproject.org/ENCDO187BUH/


title: Control Mint-ChIP-seq from naive thymus-derived CD8-positive, alpha-beta T cell (ENCLB313EHL)

description:
https://www.encodeproject.org/experiments/ENCSR034MTZ/
***************
biological replicate number: 1
technical replicate number: 1
description: Control Mint-ChIP-seq on human naive thymus-derived CD8-positive, alpha-beta T cell
experiment encode accession: ENCSR034MTZ
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-08-04
lab: Bradley Bernstein, Broad
library encode accession: ENCLB313EHL
instrument models: Illumina HiSeq 2500,Illumina NovaSeq 6000


title: Mint-ChIP-seq from CD4-positive, alpha-beta memory T cell (ENCLB154ZFS)

description:
https://www.encodeproject.org/experiments/ENCSR935ELX/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me3 ChIP-seq on CD4-positive, alpha-beta memory T cell male adult (43 years)
experiment encode accession: ENCSR935ELX
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR817QVK
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB154ZFS
fragmentation methods: none

source_name: Homo sapiens male adult (43 years) CD4-positive, alpha-beta memory T primary cell

value: CD4-positive, alpha-beta memory T cell

value: adult

value: 43 year

value: Yijun Ruan, JAX

value: AllCells

value: ENCBS050OWF at ENCODE; https://www.encodeproject.org/ENCBS050OWF/

value: Derived from ENCODE donor ENCDO791UJG; https://www.encodeproject.org/ENCDO791UJG/


title: Mint-ChIP-seq from naive thymus-derived CD8-positive, alpha-beta T cell (ENCLB039FBE)

description:
https://www.encodeproject.org/experiments/ENCSR216ZVA/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27me3 Mint-ChIP-seq on human naive thymus-derived CD8-positive, alpha-beta T cell
experiment encode accession: ENCSR216ZVA
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR243EIU
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB039FBE

value: supplied by Hafler lab as part of Encode4 project starting July2017

value: not collected

value: Bradley Bernstein, Broad


title: Mint-ChIP-seq from brain (ENCLB009JRO)

description:
https://www.encodeproject.org/experiments/ENCSR127HNP/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K27me3 Mint-ChIP-seq on human PGP1 derived brain organoid
experiment encode accession: ENCSR127HNP
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR106WDX
encode release date: 2020-07-30
lab: Bradley Bernstein, Broad
library encode accession: ENCLB009JRO
fragmentation methods: none

value: brain

value: organoid

value: brain organoids created by Arlotta lab using new protocol to create more reliable organoids.

value: male

value: 53 year

value: Paola Arlotta

value: ENCBS252LAB at ENCODE; https://www.encodeproject.org/ENCBS252LAB/

value: Derived from ENCODE donor ENCDO336AAA; https://www.encodeproject.org/ENCDO336AAA/


title: Mint-ChIP-seq from astrocyte (ENCLB586ZJL)

description:
https://www.encodeproject.org/experiments/ENCSR835CSP/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K9me3 Mint-ChIP-seq on human PGP1 derived astrocyte
experiment encode accession: ENCSR835CSP
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR731CEI
encode release date: 2021-05-18
lab: Bradley Bernstein, Broad
library encode accession: ENCLB586ZJL
fragmentation methods: none

value: astrocyte

value: in vitro differentiated cells

value: PGP1 derived astrocytes

value: adult

value: George Church

value: ENCBS534DJA at ENCODE; https://www.encodeproject.org/ENCBS534DJA/


title: Mint-ChIP-seq from CD4-positive, alpha-beta memory T cell (ENCLB832IER)

description:
https://www.encodeproject.org/experiments/ENCSR935ELX/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 ChIP-seq on CD4-positive, alpha-beta memory T cell male adult (43 years)
experiment encode accession: ENCSR935ELX
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR817QVK
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB832IER
fragmentation methods: none

value: CD4-positive, alpha-beta memory T cell

value: primary cell

value: 43 year

value: Yijun Ruan, JAX

value: AllCells

value: ENCBS050OWF at ENCODE; https://www.encodeproject.org/ENCBS050OWF/

value: Derived from ENCODE donor ENCDO791UJG; https://www.encodeproject.org/ENCDO791UJG/


title: Mint-ChIP-seq from CD4-positive, alpha-beta T cell (ENCLB795YSW)

description:
https://www.encodeproject.org/experiments/ENCSR833DCI/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me1 ChIP-seq on CD4-positive, alpha-beta T cell male adult (20 years)
experiment encode accession: ENCSR833DCI
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR774CGN
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB795YSW
fragmentation methods: none

value: CD4-positive, alpha-beta T cell

value: male

value: 20 year

value: ENCBS151VTD at ENCODE; https://www.encodeproject.org/ENCBS151VTD/

value: Derived from ENCODE donor ENCDO394DKX; https://www.encodeproject.org/ENCDO394DKX/


title: Control Mint-ChIP-seq from H9 (ENCLB971IQM)

description:
https://www.encodeproject.org/experiments/ENCSR931GAK/
***************
biological replicate number: 1
technical replicate number: 1
description: Control Mint-ChIP-seq on human H9
experiment encode accession: ENCSR931GAK
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-09-08
lab: Bradley Bernstein, Broad
library encode accession: ENCLB971IQM

source_name: Homo sapiens H9 cell line originated from H9

value: cell line

value: WA09 ES cells

value: female

value: healthy

value: embryonic

value: 5 day

value: Bradley Bernstein, Broad

value: SESCC

value: ENCBS654ADT at ENCODE; https://www.encodeproject.org/ENCBS654ADT/

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: Mint-ChIP-seq from IgD-negative memory B cell (ENCLB038CGQ)

description:
https://www.encodeproject.org/experiments/ENCSR831AXK/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR831AXK
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR519VQC
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB038CGQ
fragmentation methods: none

value: IgD-negative memory B cell

value: primary cell

value: B memory CD3- CD14- CD19+ CD27+ IgD-

value: not collected

value: unknown

value: David Hafler

value: ENCBS318ZNB at ENCODE; https://www.encodeproject.org/ENCBS318ZNB/

value: Derived from ENCODE donor ENCDO922TOC; https://www.encodeproject.org/ENCDO922TOC/


title: Control Mint-ChIP-seq from H9 (ENCLB304SQI)

description:
https://www.encodeproject.org/experiments/ENCSR931GAK/
***************
biological replicate number: 2
technical replicate number: 2
description: Control Mint-ChIP-seq on human H9
experiment encode accession: ENCSR931GAK
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-09-08
lab: Bradley Bernstein, Broad
library encode accession: ENCLB304SQI

value: cell line

value: WA09 ES cells

value: ENCBS713BMM at ENCODE; https://www.encodeproject.org/ENCBS713BMM/


title: Mint-ChIP-seq from IgD-negative memory B cell (ENCLB625HHL)

description:
https://www.encodeproject.org/experiments/ENCSR119PSR/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K36me3 Mint-ChIP-seq on human IgD-negative memory B cell
experiment encode accession: ENCSR119PSR
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR808EUQ
encode release date: 2020-07-30
lab: Bradley Bernstein, Broad
library encode accession: ENCLB625HHL

source_name: Homo sapiens IgD-negative memory B primary cell with multiple sclerosis

value: supplied by Hafler lab as part of Encode4 project starting July2017

value: multiple sclerosis

value: ENCBS720RJK at ENCODE; https://www.encodeproject.org/ENCBS720RJK/

value: Derived from ENCODE donor ENCDO553CCA; https://www.encodeproject.org/ENCDO553CCA/


title: Mint-ChIP-seq from naive B cell (ENCLB590ATM)

description:
https://www.encodeproject.org/experiments/ENCSR931JYC/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me1 Mint-ChIP-seq on human naive B cell
experiment encode accession: ENCSR931JYC
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR111MNI
encode release date: 2020-09-05
lab: Bradley Bernstein, Broad
library encode accession: ENCLB590ATM
fragmentation methods: none
instrument models: Illumina NextSeq 500,Illumina NovaSeq 6000,Illumina HiSeq 2500

source_name: Homo sapiens naive B primary cell with multiple sclerosis, preserved by cryopreservation

value: naive B cell

value: B naive CD3- CD14- CD19+ CD27- IgD+

value: Bradley Bernstein, Broad

value: ENCBS743ZAV at ENCODE; https://www.encodeproject.org/ENCBS743ZAV/

value: Derived from ENCODE donor ENCDO187BUH; https://www.encodeproject.org/ENCDO187BUH/


title: Control Mint-ChIP-seq from H9 (ENCLB979KJO)

description:
https://www.encodeproject.org/experiments/ENCSR931GAK/
***************
biological replicate number: 2
technical replicate number: 1
description: Control Mint-ChIP-seq on human H9
experiment encode accession: ENCSR931GAK
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-09-08
lab: Bradley Bernstein, Broad
library encode accession: ENCLB979KJO

value: female

value: healthy

value: embryonic

value: 5 day

value: SESCC

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: Mint-ChIP-seq from GM23338 (ENCLB155WME)

description:
https://www.encodeproject.org/experiments/ENCSR212MTU/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 Mint-ChIP-seq on human GM23338
experiment encode accession: ENCSR212MTU
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR787HYA
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB155WME
fragmentation methods: none

source_name: Homo sapiens GM23338 cell line, preserved by cryopreservation

value: cell line

value: PGP1 iPSCs

value: male

value: adult

value: 53 year

value: George Church

value: ENCBS155WDP at ENCODE; https://www.encodeproject.org/ENCBS155WDP/

value: Derived from ENCODE donor ENCDO336AAA; https://www.encodeproject.org/ENCDO336AAA/


title: Control Mint-ChIP-seq from CD4-positive, alpha-beta memory T cell (ENCLB204ALP)

description:
https://www.encodeproject.org/experiments/ENCSR934ZBY/
***************
biological replicate number: 1
technical replicate number: 1
description: Control Mint-ChIP-seq on human CD4-positive, alpha-beta memory T cell
experiment encode accession: ENCSR934ZBY
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-08-04
lab: Bradley Bernstein, Broad
library encode accession: ENCLB204ALP
instrument models: Illumina NextSeq 500,Illumina HiSeq 2500,Illumina NovaSeq 6000

source_name: Homo sapiens CD4-positive, alpha-beta memory T primary cell, preserved by cryopreservation

value: CD4-positive, alpha-beta memory T cell

value: primary cell

value: CD4+ memory CD3+ CD4+ CD8- CD45RA- CD45RO+ nonTreg

value: not collected

value: unknown

value: Bradley Bernstein, Broad

value: David Hafler

value: ENCBS668VBU at ENCODE; https://www.encodeproject.org/ENCBS668VBU/

value: Derived from ENCODE donor ENCDO922TOC; https://www.encodeproject.org/ENCDO922TOC/


title: Mint-ChIP-seq from naive B cell (ENCLB518IUI)

description:
https://www.encodeproject.org/experiments/ENCSR929MPF/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K9me3 Mint-ChIP-seq on human naive B cell
experiment encode accession: ENCSR929MPF
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR119CTT
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB518IUI
fragmentation methods: none

value: naive B cell

value: B naive CD3- CD14- CD19+ CD27- IgD+

value: healthy

value: ENCBS182GUX at ENCODE; https://www.encodeproject.org/ENCBS182GUX/


title: Control Mint-ChIP-seq from H9 (ENCLB138XMW)

description:
https://www.encodeproject.org/experiments/ENCSR931GAK/
***************
biological replicate number: 1
technical replicate number: 2
description: Control Mint-ChIP-seq on human H9
experiment encode accession: ENCSR931GAK
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-09-08
lab: Bradley Bernstein, Broad
library encode accession: ENCLB138XMW

value: cell line

value: WA09 ES cells

value: female

value: embryonic

value: 5 day

value: SESCC

value: ENCBS654ADT at ENCODE; https://www.encodeproject.org/ENCBS654ADT/

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: Mint-ChIP-seq from IgD-negative memory B cell (ENCLB213UNI)

description:
https://www.encodeproject.org/experiments/ENCSR119PSR/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 Mint-ChIP-seq on human IgD-negative memory B cell
experiment encode accession: ENCSR119PSR
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR808EUQ
encode release date: 2020-07-30
lab: Bradley Bernstein, Broad
library encode accession: ENCLB213UNI

value: IgD-negative memory B cell

value: primary cell

value: supplied by Hafler lab as part of Encode4 project starting July2017

value: not collected

value: multiple sclerosis

value: unknown

value: ENCBS720RJK at ENCODE; https://www.encodeproject.org/ENCBS720RJK/

value: Derived from ENCODE donor ENCDO553CCA; https://www.encodeproject.org/ENCDO553CCA/


title: Control Mint-ChIP-seq from CD8-positive, alpha-beta memory T cell (ENCLB940IMU)

description:
https://www.encodeproject.org/experiments/ENCSR019FIH/
***************
biological replicate number: 1
technical replicate number: 1
description: Control Mint-ChIP-seq on human CD8-positive, alpha-beta memory T cell
experiment encode accession: ENCSR019FIH
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-08-04
lab: Bradley Bernstein, Broad
library encode accession: ENCLB940IMU
instrument models: Illumina HiSeq 2500,Illumina NovaSeq 6000

source_name: Homo sapiens CD8-positive, alpha-beta memory T primary cell with multiple sclerosis, preserved by cryopreservation

value: CD8-positive, alpha-beta memory T cell

value: CD8+ memory CD3+ CD4- CD8+ CD45RA- CD45RO+

value: Bradley Bernstein, Broad

value: David Hafler

value: ENCBS229YZM at ENCODE; https://www.encodeproject.org/ENCBS229YZM/

value: Derived from ENCODE donor ENCDO187BUH; https://www.encodeproject.org/ENCDO187BUH/


title: Mint-ChIP-seq from naive B cell (ENCLB894AOX)

description:
https://www.encodeproject.org/experiments/ENCSR929MPF/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9me3 Mint-ChIP-seq on human naive B cell
experiment encode accession: ENCSR929MPF
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR119CTT
encode release date: 2020-09-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB894AOX
fragmentation methods: none

value: naive B cell

value: B naive CD3- CD14- CD19+ CD27- IgD+

value: healthy

value: ENCBS182GUX at ENCODE; https://www.encodeproject.org/ENCBS182GUX/

value: Derived from ENCODE donor ENCDO922TOC; https://www.encodeproject.org/ENCDO922TOC/


title: Mint-ChIP-seq from brain (ENCLB210SQH)

description:
https://www.encodeproject.org/experiments/ENCSR019BOC/
***************
biological replicate number: 3
technical replicate number: 1
description: H3K4me3 Mint-ChIP-seq on human H9 derived brain organoid
experiment encode accession: ENCSR019BOC
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR824UQL
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB210SQH
fragmentation methods: none

source_name: Homo sapiens female embryo (5 days) brain organoid, 30 days post differentiation

value: brain

value: organoid

value: female

value: embryonic

value: 5 day

value: Paola Arlotta

value: ENCBS001KQF at ENCODE; https://www.encodeproject.org/ENCBS001KQF/

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: Control Mint-ChIP-seq from CD8-positive, alpha-beta memory T cell (ENCLB925SIA)

description:
https://www.encodeproject.org/experiments/ENCSR019FIH/
***************
biological replicate number: 1
technical replicate number: 2
description: Control Mint-ChIP-seq on human CD8-positive, alpha-beta memory T cell
experiment encode accession: ENCSR019FIH
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2020-08-04
lab: Bradley Bernstein, Broad
library encode accession: ENCLB925SIA
instrument models: Illumina HiSeq 2500,Illumina NovaSeq 6000

value: CD8-positive, alpha-beta memory T cell

value: primary cell

value: CD8+ memory CD3+ CD4- CD8+ CD45RA- CD45RO+

value: not collected

value: multiple sclerosis

value: unknown

value: Bradley Bernstein, Broad


title: Mint-ChIP-seq from CD8-positive, alpha-beta T cell (ENCLB618LDQ)

description:
https://www.encodeproject.org/experiments/ENCSR928PSU/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac Mint-ChIP-seq of CD8-positive, alpha-beta T cell male adult (21 years)
experiment encode accession: ENCSR928PSU
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR820SXH
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB618LDQ
fragmentation methods: none

source_name: Homo sapiens male adult (21 years) CD8-positive, alpha-beta T primary cell

value: CD8-positive, alpha-beta T cell

value: male

value: adult

value: 21 year

value: Yijun Ruan, JAX

value: AllCells

value: ENCBS832HZD at ENCODE; https://www.encodeproject.org/ENCBS832HZD/

value: Derived from ENCODE donor ENCDO781BMZ; https://www.encodeproject.org/ENCDO781BMZ/


title: Mint-ChIP-seq from brain (ENCLB036KHS)

description:
https://www.encodeproject.org/experiments/ENCSR019BOC/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 Mint-ChIP-seq on human H9 derived brain organoid
experiment encode accession: ENCSR019BOC
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR824UQL
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB036KHS
fragmentation methods: none

value: brain

value: organoid

value: female

value: healthy

value: embryonic

value: 5 day

value: Paola Arlotta

value: ENCBS337FMJ at ENCODE; https://www.encodeproject.org/ENCBS337FMJ/


title: Mint-ChIP-seq from brain (ENCLB762NHK)

description:
https://www.encodeproject.org/experiments/ENCSR019BOC/
***************
biological replicate number: 3
technical replicate number: 2
description: H3K4me3 Mint-ChIP-seq on human H9 derived brain organoid
experiment encode accession: ENCSR019BOC
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR824UQL
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB762NHK
fragmentation methods: none

value: Bradley Bernstein, Broad

value: ENCBS001KQF at ENCODE; https://www.encodeproject.org/ENCBS001KQF/

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: Mint-ChIP-seq from CD8-positive, alpha-beta T cell (ENCLB042NQH)

description:
https://www.encodeproject.org/experiments/ENCSR928PSU/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac Mint-ChIP-seq of CD8-positive, alpha-beta T cell male adult (21 years)
experiment encode accession: ENCSR928PSU
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR820SXH
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB042NQH
fragmentation methods: none

value: CD8-positive, alpha-beta T cell

value: primary cell

value: male

value: adult


title: Mint-ChIP-seq from brain (ENCLB055GZI)

description:
https://www.encodeproject.org/experiments/ENCSR019BOC/
***************
biological replicate number: 2
technical replicate number: 2
description: H3K4me3 Mint-ChIP-seq on human H9 derived brain organoid
experiment encode accession: ENCSR019BOC
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR824UQL
encode release date: 2021-05-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB055GZI
fragmentation methods: none

value: ENCBS219JHY at ENCODE; https://www.encodeproject.org/ENCBS219JHY/


title: Mint-ChIP-seq from naive thymus-derived CD8-positive, alpha-beta T cell (ENCLB602UWP)

description:
https://www.encodeproject.org/experiments/ENCSR119DDY/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me1 Mint-ChIP-seq on human naive thymus-derived CD8-positive, alpha-beta T cell
experiment encode accession: ENCSR119DDY
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR881SIP
encode release date: 2020-07-30
lab: Bradley Bernstein, Broad
library encode accession: ENCLB602UWP
fragmentation methods: none

source_name: Homo sapiens naive thymus-derived CD8-positive, alpha-beta T primary cell

value: supplied by Hafler lab as part of Encode4 project starting July2017

value: not collected

value: unknown

value: David Hafler

value: ENCBS135XFB at ENCODE; https://www.encodeproject.org/ENCBS135XFB/

value: Derived from ENCODE donor ENCDO836ICQ; https://www.encodeproject.org/ENCDO836ICQ/


title: Mint-ChIP-seq from naive B cell (ENCLB633NHY)

description:
https://www.encodeproject.org/experiments/ENCSR931JYC/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 Mint-ChIP-seq on human naive B cell
experiment encode accession: ENCSR931JYC
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR111MNI
encode release date: 2020-09-05
lab: Bradley Bernstein, Broad
library encode accession: ENCLB633NHY
fragmentation methods: none
instrument models: Illumina NextSeq 500,Illumina HiSeq 2500,Illumina NovaSeq 6000

value: naive B cell

value: B naive CD3- CD14- CD19+ CD27- IgD+

value: multiple sclerosis

value: ENCBS743ZAV at ENCODE; https://www.encodeproject.org/ENCBS743ZAV/

value: Derived from ENCODE donor ENCDO187BUH; https://www.encodeproject.org/ENCDO187BUH/