title: Embryo 36hpf_20160825_bath study 36hpf 26-06 strip 3_  _05.RCC


title: Embryo 36hpf_20160825_bath study 36hpf 26-06 strip 3_  _02.RCC

status: Public on Oct 09 2021

type: RNA

city: Moscow

first: Leonid

last: Uroshlev

address: Gubkina, 3

country: Russia

institute: Vavilov Institute of General Genetics RAS

description: This sample was filtered out of the analysis and contains no processed data.

hyb_protocol: Hybridize with both Reporter and Capture probes. NanoString manufacturer's protocol

scan_protocol: nCounter analysis system

data_processing: We removed cells with poor total counts of test probes other than those of housekeeping genes (rpl13 and kanamycin), assuming that most of them related to cell types expressing other cell markers than those represented in our panel. In addition, we removed data for probes (genes) that displayed expression in only a small number of cells. We used the NanoStringNorm R package, and removed a number of cells with poor norm factors and noisy background.  Normalization was performed using the sum of probes (kanamycin spike-in and rpl13 internal controls) as the reference housekeeping class with ‘mean and 2sd’ selected for the background.  We filtered the expression matrix nullifying elements with values less than 30 and imputed for dropouts using drImpute. In total about 20% of zero counts have been imputed into meaningful quantitative values.

label: NanoString manufacturer's protocol

molecule: polyA RNA

organism: Danio rerio

source_name: Neural Crest

label_protocol: NanoString manufacturer's protocol

growth_protocol: Embryos were obtained from natural crosses and staged according to Kimmel et al. System water is made up from Reverse Osmosis water, with synthetic sea salt added at an amount such that the conductivity of the water is kept at approximately 800uS. Average water quality data are as follows: pH: 7.30, general Hardness: 160mg/l CaCO3, Ammonia: 0 mg/l NH3, Nitrite: 0 mg/l NO2, Nitrate: < 10 mg/l NO3- and Conductivity: around 800μS/cm. Light cycle is 14 hours light/10 hours dark (Lights on at 08:00, off at 22:00 daily). All fish were in general good health and no specific diseases were observed throughout the colony. The fish were fed Paramecium from 5-15dpf, followed by Ziegler Larval AP100 powder from day 16 – 22dpf. From 23dpf onwards they are fed Sparos Zebrafeed and Brine Shrimp. Fish euthanized by schedule 1 killing were given an overdose of an anaesthetic (5 drops of 0.48% MS-222 added to a petridish of water)

extract_protocol: To extract RNA from Trizol stocks we used Direct-zol™ RNA MicroPrep (Cat.# R2062, ZymoResearch, USA) according the manufacturer’s protocol. The total RNA was extracted in 10 ml, measured using Nanodrop-2000, and tested with Experion™ RNA HighSens Analysis Kits (Cat.# 700-7105, Bio-Rad ) using the Experion™ Automated Electrophoresis System (Bio-Rad). 5 ml of total RNA from either melanocytes or iridophore (50-60 ng/ml) was used directly for NanoString expression analysis

tag: age (hpf)

tag: genotype

value: wild type

tag: tissue

value: decapitated embryos


title: Embryo 36hpf_20160825_bath study 36hpf 26-06 strip 3_  _10.RCC


title: Embryo 21hpf_20160802_bath study 21hpf 22-03-16 sample 13-24 _ _10.RCC

value: whole embryos


title: Embryo 36hpf_20160825_bath study 36hpf 26-06 strip 3_  _01.RCC


title: Embryo 21hpf_20160802_bath study 21hpf 22-03-16 sample 13-24 _ _07.RCC


title: Embryo 21hpf_20160802_bath study 21hpf 22-03-16 sample 13-24 _ _04.RCC


title: Embryo 48hpf_20160407_bath study new 48hpf 2_ 23_11.RCC


title: Embryo 21hpf_20160802_bath study 21hpf 22-03-16 sample 13-24 _ _02.RCC


title: Embryo 21hpf_20160802_bath study 21hpf 22-03-16 sample 13-24 _ _06.RCC


title: Embryo 21hpf_20160802_bath study 21hpf 22-03-16 sample 13-24 _ _03.RCC


title: Embryo 21hpf_20160802_bath study 21hpf 22-03-16 sample 13-24 _ _09.RCC


title: Embryo 21hpf_20160802_Bath study 21HPF 22-03-16 samples 25-36_ 1_11.RCC


title: Embryo 21hpf_20160802_Bath study 21HPF 22-03-16 samples 25-36_ 1_12.RCC


title: Embryo 21hpf_20160802_Bath study 21HPF 22-03-16 samples 25-36_ 1_02.RCC


title: Embryo 21hpf_20160802_Bath study 21HPF 22-03-16 samples 25-36_ 1_10.RCC


title: Embryo 21hpf_20160802_Bath study 21HPF 22-03-16 samples 25-36_ 1_06.RCC


title: Embryo 72hpf_20160803_bath mc melano samples 25-36 12-07-16_ 19_07.RCC

value: whole embryo


title: Embryo 21hpf_20160802_Bath study 21HPF 22-03-16 samples 25-36_ 1_09.RCC


title: Embryo 48hpf_20160914_bath study 48hpf 07-04 indexed (08-04) s49-60_ 59_11.RCC


title: Embryo 21hpf_20160802_Bath study 21HPF 22-03-16 samples 25-36_ 1_01.RCC


title: Embryo 72hpf_20160803_bath mc melano samples 25-36 12-07-16_ 22_10.RCC


title: Embryo 48hpf_20160914_bath study 48hpf 07-04 indexed (08-04) s49-60_ 58_10.RCC


title: Embryo 48hpf_20160914_bath study 48hpf 07-04 indexed (08-04) s49-60_ 56_08.RCC


title: Embryo 48hpf_20160914_bath study 48hpf 07-04 indexed (08-04) s49-60_ 55_07.RCC


title: Embryo 48hpf_20160914_bath study 48hpf 07-04 indexed (08-04) s49-60_ 57_09.RCC


title: Embryo 48hpf_20160914_bath study 48hpf 07-04 indexed (08-04) s49-60_ 54_06.RCC


title: Embryo 48hpf_20160914_bath study 48hpf 07-04 indexed (08-04) s49-60_ 52_04.RCC


title: Embryo 24hpf_20170516_bath study 24hpf 27-04-17 strip c tails_ _10.RCC

value: tails


title: Embryo 48hpf_20160914_bath study 48hpf 07-04 indexed (08-04) s49-60_ 50_02.RCC


title: Embryo 48hpf_20160914_bath study 48hpf 07-04 indexed (08-04) s49-60_ 51_03.RCC


title: Embryo 21hpf_20160802_bath study 21hpf 22-03-16 sample 13-24 _ _01.RCC


title: Embryo 48hpf_20160914_bath study 48hpf 07-04 indexed (08-04) s49-60_ 53_05.RCC


title: Embryo 48hpf_20160914_bath study 48hpf 07-04 indexed (08-04) s49-60_ 49_01.RCC


title: Embryo 24hpf_20170516_bath study 24hpf 27-04-17 strip b tails_ _05.RCC


title: Embryo 24hpf_20170516_bath study 24hpf 27-04-17 strip b tails_ _03.RCC


title: Embryo 24hpf_20170607_bath study 24hpf 05-05-17 strip d tails_ _05.RCC


title: Embryo 24hpf_20170516_bath study 24hpf 27-04-17 strip b tails_ _02.RCC


title: Embryo 24hpf_20170607_bath study 24hpf 05-05-17 strip c tails_ _08.RCC


title: Embryo 24hpf_20170607_bath study 24hpf 05-05-17 strip d tails_ _12.RCC


title: Embryo 72hpf_20160803_bath mc melano samples 25-36 12-07-16_ 18_06.RCC


title: Embryo 24hpf_20170516_bath study 24hpf 27-04-17 strip b tails_ _04.RCC


title: Embryo 30hpf_20170608_bath study 30hpf 06-04-17 strip d plate 1_ _03.RCC


title: Embryo 48hpf_20160928_bath study 48hpf MC 15-09-16 stripA_ _05.RCC


title: Embryo 30hpf_20170608_bath study 30hpf 06-04-17 strip d plate 1_ _05.RCC


title: Embryo 30hpf_20170608_bath study 30hpf 06-04-17 strip d plate 1_ _09.RCC


title: Embryo 30hpf_20170608_bath study 30hpf 06-04-17 strip d plate 1_ _02.RCC


title: Embryo 30hpf_20170608_bath study 30hpf 06-04-17 strip d plate 1_ _04.RCC


title: Embryo 30hpf_20170608_bath study 30hpf 06-04-17 strip c plate 1_ _12.RCC


title: Embryo 48hpf_20160928_bath study 48hpf MC 15-09-16 stripA_ _10.RCC


title: Embryo 30hpf_20170608_bath study 30hpf 06-04-17 strip c plate 1_ _11.RCC


title: Embryo 30hpf_20170608_bath study 30hpf 06-04-17 strip c plate 1_ _09.RCC


title: Embryo 30hpf_20170608_bath study 30hpf 06-04-17 strip c plate 1_ _10.RCC


title: Embryo 24hpf_20170516_bath study 24hpf 27-04-17 strip c tails_ _01.RCC


title: Embryo 30hpf_20170608_bath study 30hpf 06-04-17 strip c plate 1_ _08.RCC


title: Embryo 30hpf_20170608_bath study 30hpf 06-04-17 strip c plate 1_ _07.RCC


title: Embryo 30hpf_20170608_bath study 30hpf 06-04-17 strip c plate 1_ _04.RCC


title: Embryo 24hpf_20160624_bath study 24hpf 06-04 1-12_ 12_12.RCC


title: Embryo 24hpf_20160216_bath study 1_ 12_12.RCC


title: Embryo 24hpf_20160216_bath study 1_ 5_05.RCC


title: Embryo 24hpf_20160216_bath study 1_ 4_04.RCC


title: Embryo 24hpf_20160624_bath study 24hpf 06-04 1-12_ 11_11.RCC


title: Embryo 24hpf_20160624_bath study 24hpf 06-04 1-12_ 8_08.RCC


title: Embryo 24hpf_20160624_bath study 24hpf 06-04 1-12_ 6_06.RCC


title: Embryo 24hpf_20160216_bath study 1_ 1_01.RCC


title: Embryo 24hpf_20160624_bath study 24hpf 06-04 1-12_ 1_01.RCC


title: Embryo 24hpf_20160624_bath study 24hpf 06-04 1-12_ 4_04.RCC


title: Embryo 24hpf_20160624_bath study 24hpf 06-04 1-12_ 7_07.RCC


title: Embryo 30hpf_20170503_bath study 30hpf 16-03-17 strip b plate 3_ _12.RCC


title: Embryo 30hpf_20170503_bath study 30hpf 16-03-17 strip b plate 3_ _11.RCC


title: Embryo 30hpf_20170503_bath study 30hpf 16-03-17 strip a plate 1_ _12.RCC


title: Embryo 30hpf_20170503_bath study 30hpf 16-03-17 strip a plate 1_ _03.RCC


title: Embryo 30hpf_20170503_bath study 30hpf 16-03-17 strip a plate 1_ _02.RCC


title: Embryo 30hpf_20170503_bath study 30hpf 16-03-17 strip a plate 1_ _01.RCC


title: Embryo 30hpf_20160901_bath study 30hpf 13-04 samples 37-48_ 48_12.RCC


title: Embryo 30hpf_20170425_bath study 30hpf 16-03-17 strip a_ _11.RCC


title: Embryo 24hpf_20160216_bath study 1_ 11_11.RCC


title: Embryo 30hpf__20161019_bath study mitta w2 28-09-16 STRIP C 30hpf_ _10.RCC


title: Embryo 48hpf_20160928_bath study 48hpf mc 15-09-16 stripB_ _10.RCC


title: Embryo 30hpf__20161019_bath study mitta w2 28-09-16 STRIP C 30hpf_ _11.RCC


title: Embryo 30hpf__20161019_bath study mitta w2 28-09-16 STRIP C 30hpf_ _12.RCC


title: Embryo 30hpf__20161019_bath study mitta w2 28-09-16 STRIP C 30hpf_ _06.RCC


title: Embryo 30hpf__20161019_bath study mitta w2 28-09-16 STRIP C 30hpf_ _08.RCC


title: Embryo 30hpf__20161019_bath study mitta w2 28-09-16 STRIP C 30hpf_ _05.RCC


title: Embryo 30hpf__20161019_bath study mitta w2 28-09-16 STRIP C 30hpf_ _04.RCC


title: Embryo 30hpf__20161019_bath study mitta w2 28-09-16 STRIP C 30hpf_ _02.RCC


title: Embryo 30hpf__20161019_bath study mitta w2 28-09-16 STRIP C 30hpf_ _03.RCC


title: Embryo 30hpf__20161019_bath study mitta w2 28-09-16 STRIP C 30hpf_ _01.RCC


title: Embryo 30hpf_20161019_bath study 30hpf mitta w2 strip c 28-09-16_ _12.RCC


title: Embryo 30hpf_20161019_bath study 30hpf mitta w2 strip c 28-09-16_ _10.RCC


title: Embryo 30hpf_20161019_bath study 30hpf mitta w2 strip c 28-09-16_ _11.RCC


title: Embryo 30hpf_20161019_bath study 30hpf mitta w2 strip c 28-09-16_ _09.RCC


title: Embryo 30hpf_20161019_bath study 30hpf mitta w2 strip c 28-09-16_ _07.RCC


title: Embryo 30hpf__20161019_bath study mitta w2 28-09-16 STRIP C 30hpf_ _07.RCC


title: Embryo 30hpf_20161019_bath study 30hpf mitta w2 strip c 28-09-16_ _08.RCC


title: Embryo 30hpf_20161019_bath study 30hpf mitta w2 strip c 28-09-16_ _04.RCC


title: Embryo 30hpf_20161019_bath study 30hpf mitta w2 strip c 28-09-16_ _03.RCC


title: Embryo 30hpf_20161019_bath study 30hpf mitta w2 strip c 28-09-16_ _05.RCC


title: Embryo 30hpf_20161019_bath study 30hpf mitta w2 strip c 28-09-16_ _02.RCC


title: Embryo 30hpf_20170425_bath study 30hpf 16-03-17 strip a_ _01.RCC


title: Embryo 30hpf_20160901_bath study 30hpf 13-04 samples 37-48_ 40_04.RCC


title: Embryo 30hpf_20161019_bath study 30hpf mitta w2 strip c 28-09-16_ _06.RCC


title: Embryo 30hpf_20160901_bath study 30hpf 13-04 samples 37-48_ 39_03.RCC


title: Embryo 30hpf__20161019_bath study mitta w2 28-09-16 STRIP C 30hpf_ _09.RCC


title: Embryo 30hpf_20161018_bath study 30hpf mitta w2 28-09-16 stripA_ _11.RCC


title: Embryo 30hpf_20161018_bath study 30hpf mitta w2 28-09-16 stripA_ _12.RCC


title: Embryo 30hpf_20161019_bath study 30hpf mitta w2 strip c 28-09-16_ _01.RCC


title: Embryo 30hpf_20161018_bath study 30hpf mitta w2 28-09-16 stripA_ _09.RCC


title: Embryo 30hpf_20161018_bath study 30hpf mitta w2 28-09-16 stripA_ _10.RCC


title: Embryo 30hpf_20161018_bath study 30hpf mitta w2 28-09-16 stripA_ _08.RCC


title: Embryo 30hpf_20161018_bath study 30hpf mitta w2 28-09-16 stripA_ _07.RCC


title: Embryo 30hpf_20161018_bath study 30hpf mitta w2 28-09-16 stripA_ _04.RCC


title: Embryo 30hpf_20161018_bath study 30hpf mitta w2 28-09-16 stripA_ _05.RCC


title: Embryo 30hpf_20161018_bath study 30hpf mitta w2 28-09-16 stripA_ _06.RCC


title: Embryo 48hpf_20160323_bath study 6 48hpf_ 18_06.RCC


title: Embryo 30hpf_20161018_bath study 30hpf mitta w2 28-09-16 stripA_ _01.RCC


title: Embryo 48hpf_20160323_bath study 6 48hpf_ 24_12.RCC


title: Embryo 48hpf_20160323_bath study 6 48hpf_ 21_09.RCC


title: Embryo 30hpf_20161018_bath study 30hpf mitta w2 28-09-16 stripA_ _02.RCC


title: Embryo 30hpf_20161018_bath study 30hpf mitta w2 28-09-16 stripA_ _03.RCC


title: Embryo 48hpf_20160323_bath study 6 48hpf_ 20_08.RCC


title: Embryo 48hpf_20160323_bath study 6 48hpf_ 22_10.RCC


title: Embryo 48hpf_20160323_bath study 6 48hpf_ 19_07.RCC


title: Embryo 60hpf_20160622_bath study 60hpf 26-05 strip1_ 1_01.RCC


title: Embryo 30hpf_20161021_bath study 30hpf mitta w2 16-10-05 stripD_ _12.RCC

value: mitf w2 mutants


title: Embryo 30hpf_20161021_bath study 30hpf mitta w2 16-10-05 stripD_ _11.RCC


title: Embryo 72hpf_20160916_bath study stripA 12-09-16_ _12.RCC


title: Embryo 30hpf_20161021_bath study 30hpf mitta w2 16-10-05 stripD_ _10.RCC


title: Embryo 30hpf_20161021_bath study 30hpf mitta w2 16-10-05 stripD_ _09.RCC


title: Embryo 30hpf_20161021_bath study 30hpf mitta w2 16-10-05 stripD_ _08.RCC


title: Embryo 48hpf_20160323_bath study 6 48hpf_ 15_03.RCC


title: Embryo 48hpf_20160323_bath study 6 48hpf_ 16_04.RCC


title: Embryo 30hpf_20161021_bath study 30hpf mitta w2 16-10-05 stripD_ _07.RCC


title: Embryo 24hpf_20170518_bath study 27-04-17 24hpf strip f tails_ _05.RCC


title: Embryo 30hpf_20161021_bath study 30hpf mitta w2 16-10-05 stripD_ _06.RCC


title: Embryo 30hpf_20161021_bath study 30hpf mitta w2 16-10-05 stripD_ _04.RCC


title: Embryo 30hpf_20161021_bath study 30hpf mitta w2 16-10-05 stripD_ _02.RCC


title: Embryo 48hpf_20160323_bath study 6 48hpf_ 14_02.RCC


title: Embryo 48hpf_20160323_bath study 6 48hpf_ 13_01.RCC


title: Embryo 48hpf_20160323_bath study 6 48hpf_ 17_05.RCC


title: Embryo 30hpf_20161021_bath study 30hpf mitf w2 05-10-16 strip C_ _10.RCC


title: Embryo 30hpf_20161021_bath study 30hpf mitf w2 05-10-16 strip C_ _12.RCC


title: Embryo 30hpf_20161021_bath study 30hpf mitf w2 05-10-16 strip C_ _09.RCC


title: Embryo 30hpf_20161021_bath study 30hpf mitf w2 05-10-16 strip C_ _06.RCC


title: Embryo 30hpf_20161021_bath study 30hpf mitta w2 16-10-05 stripD_ _05.RCC


title: Embryo 30hpf_20161021_bath study 30hpf mitf w2 05-10-16 strip C_ _03.RCC


title: Embryo 30hpf_20161021_bath study 30hpf mitf w2 05-10-16 strip C_ _04.RCC


title: Embryo 30hpf_20161021_bath study 30hpf mitf w2 05-10-16 strip C_ _07.RCC


title: Embryo 48hpf_20160323_bath study 6 48hpf_ 23_11.RCC


title: Embryo 30hpf_20161021_bath study 30hpf mitf w2 05-10-16 strip C_ _11.RCC


title: Embryo 30hpf_20161021_bath study 30hpf mitf w2 05-10-16 strip C_ _01.RCC


title: Embryo 30hpf_20161021_bath study 30hpf mitf w2 05-10-16 strip C_ _05.RCC


title: Embryo 30hpf_20161021_bath study 30hpf mitf w2 05-10-16 strip C_ _08.RCC


title: Embryo 30hpf_20161021_bath study 30hpf mitf w2 05-10-16 strip C_ _02.RCC


title: Embryo 30hpf_20161020_bath study 30hpf mitf w2 05-10-16 strip B_ _12.RCC


title: Embryo 30hpf_20161020_bath study 30hpf mitf w2 05-10-16 strip B_ _11.RCC


title: Embryo 30hpf_20161021_bath study 30hpf mitta w2 16-10-05 stripD_ _01.RCC


title: Embryo 30hpf_20161020_bath study 30hpf mitf w2 05-10-16 strip B_ _10.RCC


title: Embryo 30hpf_20161020_bath study 30hpf mitf w2 05-10-16 strip B_ _07.RCC


title: Embryo 30hpf_20161020_bath study 30hpf mitf w2 05-10-16 strip B_ _09.RCC


title: Embryo 30hpf_20161020_bath study 30hpf mitf w2 05-10-16 strip B_ _02.RCC


title: Embryo 30hpf_20161020_bath study 30hpf mitf w2 05-10-16 strip B_ _03.RCC


title: Embryo 30hpf_20161020_bath study 30hpf mitf w2 05-10-16 strip B_ _04.RCC


title: Embryo 30hpf_20161020_bath study 30hpf mitf w2 05-10-16 strip B_ _05.RCC


title: Embryo 30hpf_20161020_bath study 30hpf mitf w2 05-10-16 strip B_ _01.RCC


title: Embryo 30hpf_20161021_bath study 30hpf mitta w2 16-10-05 stripD_ _03.RCC


title: Embryo 30hpf_20161020_bath study 30hpf mitf w2 05-10-16 strip B_ _08.RCC


title: Embryo 30hpf_20161020_bath study 30hpf mitf w2 05-10-16 stripA_ _11.RCC


title: Embryo 30hpf_20161020_bath study 30hpf mitf w2 05-10-16 stripA_ _09.RCC


title: Embryo 30hpf_20161020_bath study 30hpf mitf w2 05-10-16 strip B_ _06.RCC


title: Embryo 30hpf_20161020_bath study 30hpf mitf w2 05-10-16 stripA_ _03.RCC


title: Embryo 30hpf_20161020_bath study 30hpf mitf w2 05-10-16 stripA_ _07.RCC


title: Embryo 30hpf_20161020_bath study 30hpf mitf w2 05-10-16 stripA_ _08.RCC


title: Embryo 30hpf_20161020_bath study 30hpf mitf w2 05-10-16 stripA_ _02.RCC


title: Embryo 30hpf_20161020_bath study 30hpf mitf w2 05-10-16 stripA_ _05.RCC


title: Embryo mixed_20160914_bath study mixed _ _12.RCC

value: mix


title: Embryo 30hpf_20161020_bath study 30hpf mitf w2 05-10-16 stripA_ _12.RCC


title: Embryo mixed_20160914_bath study mixed _ _09.RCC


title: Embryo 30hpf_20161020_bath study 30hpf mitf w2 05-10-16 stripA_ _06.RCC


title: Embryo mixed_20160914_bath study mixed _ _02.RCC


title: Embryo 30hpf_20161020_bath study 30hpf mitf w2 05-10-16 stripA_ _10.RCC


title: Embryo 24hpf_20170512_bath study 24hpf 27-04-17 strip a tails_ _04.RCC


title: Embryo 24hpf_20170512_bath study 24hpf 27-04-17 strip a tails_ _07.RCC


title: Embryo 24hpf_20170517_bath study 27-04-17 24hpf strip e tails_ _04.RCC


title: Embryo 60hpf_20160819_bath study 60hpf strip2 1-12_ 10 _10.RCC


title: Embryo 24hpf_20170517_bath study 27-04-17 24hpf strip e tails_ _02.RCC


title: Embryo 60hpf_20160819_bath study 60hpf strip2 1-12_ 9_09.RCC


title: Embryo mixed_20160914_bath study mixed _ _11.RCC


title: Embryo 60hpf_20160819_bath study 60hpf strip2 1-12_ 11_11.RCC


title: Embryo 24hpf_20170517_bath study 24hpf 27-04-17 strip d tails_ _05.RCC


title: Embryo 24hpf_20170517_bath study 24hpf 27-04-17 strip d tails_ _11.RCC


title: Embryo 60hpf_20160819_bath study 60hpf strip2 1-12_ 12_12.RCC


title: Embryo 24hpf_20170512_bath study 24hpf 27-04-17 strip a tails_ _03.RCC


title: Embryo 30hpf_20161020_bath study 30hpf mitf w2 05-10-16 stripA_ _04.RCC


title: Embryo 30hpf_20161020_bath study 30hpf mitf w2 05-10-16 stripA_ _01.RCC


title: Embryo 60hpf_20160819_bath study 60hpf strip2 1-12_ 6_06.RCC


title: Embryo 60hpf_20160819_bath study 60hpf strip2 1-12_ 8_08.RCC


title: Embryo 24hpf_20170512_bath study 24hpf 27-04-17 strip a tails_ _02.RCC


title: Embryo 60hpf_20160819_bath study 60hpf strip2 1-12_ 5_05.RCC


title: Embryo mixed_20160914_bath study mixed _ _10.RCC


title: Embryo 60hpf_20160819_bath study 60hpf strip2 1-12_ 2_02.RCC


title: Embryo 60hpf_20160819_bath study 60hpf strip2 1-12_ 7_07.RCC


title: Embryo 21hpf_20160315_bath study 4 21hpf_8_08.RCC


title: Embryo 21hpf_20160315_bath study 4 21hpf_2_02.RCC


title: Embryo 18hpf_20160610_bath study 18hpf 25-05 strip1_ 11_11.RCC


title: Embryo 24hpf_20160301_bath study 3_75_12.RCC


title: Embryo 18hpf_20160610_bath study 18hpf 25-05 strip1_ 6_06.RCC


title: Embryo 60hpf_20160819_bath study 60hpf strip2 1-12_ 3_03.RCC


title: Embryo 60hpf_20160819_bath study 60hpf strip2 1-12_ 1_01.RCC


title: Embryo 24hpf_20160301_bath study 3_70_07.RCC


title: Embryo 21hpf_20160315_bath study 4 21hpf_1_01.RCC


title: Embryo 24hpf_20160301_bath study 3_67_04.RCC


title: Embryo 24hpf_20160301_bath study 3_68_05.RCC


title: Embryo 21hpf_20160315_bath study 4 21hpf_12_12.RCC


title: Embryo 24hpf_20160301_bath study 3_72_09.RCC


title: Embryo 24hpf_20160301_bath study 2_21_03.RCC


title: Embryo 24hpf_20160301_bath study 2_ 19_01.RCC


title: Embryo 30hpf_20160818_bath study 30hpf 15-05 samples 13-24_   _10.RCC


title: Embryo 30hpf_20160818_bath study 30hpf 15-05 samples 13-24_   _08.RCC


title: Embryo 24hpf_20160301_bath study 3_64_01.RCC


title: Embryo 30hpf_20160818_bath study 30hpf 15-05 samples 13-24_   _02.RCC


title: Embryo 30hpf_20160818_bath study 30hpf 15-05 samples 13-24_   _01.RCC


title: Embryo 30hpf_20160818_bath study 30hpf 15-05 samples 13-24_   _12.RCC


title: Embryo 24hpf_20160301_bath study 2_27_09.RCC


title: Embryo 24hpf_20160301_bath study 2_22_04.RCC


title: Embryo 30hpf_20160818_bath study 30hpf 15-05 samples 13-24_   _07.RCC


title: Embryo 30hpf_20160818_bath study 30hpf 15-05 samples 13-24_   _11.RCC


title: Embryo 36hpf_20160826_bath study 36hpf 13-04 samples 25-36_ _11.RCC


title: Embryo 36hpf_20160826_bath study 36hpf 13-04 samples 25-36_ _09.RCC


title: Embryo 36hpf_20160826_bath study 36hpf 13-04 samples 25-36_ _12.RCC


title: Embryo 24hpf_20160301_bath study 3_73_10.RCC


title: Embryo 30hpf_20160818_bath study 30hpf 15-05 samples 13-24_   _09.RCC


title: Embryo 30hpf_20160818_bath study 30hpf 15-05 samples 13-24_   _04.RCC


title: Embryo 24hpf_20160301_bath study 3_66_03.RCC


title: Embryo 24hpf_20160301_bath study 2_ 20_02.RCC


title: Embryo 72hpf_20160727_bath study 72hpf stripB 15-04-16_ _09.RCC

description: This sample has associated processed data in the sample table.


title: Embryo 72hpf_20160727_bath study 72hpf stripB 15-04-16_ _11.RCC


title: Embryo 72hpf_20160727_bath study 72hpf stripB 15-04-16_ _05.RCC


title: Embryo 72hpf_20160727_bath study 72hpf stripB 15-04-16_ _07.RCC


title: Embryo 30hpf_20160818_bath study 30hpf 15-05 samples 13-24_   _06.RCC


title: Embryo 72hpf_20160727_bath study 72hpf stripB 15-04-16_ _03.RCC


title: Embryo 72hpf_20160727_bath study 72hpf stripB 15-04-16_  _01.RCC


title: Embryo 24hpf_20160301_bath study 2_23_05.RCC


title: Embryo 30hpf_20170602_bath study 30hpf 06-04-17 strip b plate 1_ _04.RCC


title: Embryo 72hpf_20160727_bath study 72hpf stripB 15-04-16_ _10.RCC


title: Embryo 30hpf_20170602_bath study 30hpf 06-04-17 strip b plate 1_ _10.RCC


title: Embryo 30hpf_20170602_bath study 30hpf 06-04-17 strip b plate 1_ _09.RCC


title: Embryo 72hpf_20160727_bath study 72hpf stripB 15-04-16_ _04.RCC


title: Embryo 72hpf_20160811_bath study 72hpf 15-04-16 samples 53-64_   _02.RCC


title: Embryo 72hpf_20160727_bath study 72hpf stripB 15-04-16_ _06.RCC


title: Embryo 30hpf_20170602_bath study 30hpf 06-04-17 strip b plate 1_ _02.RCC


title: Embryo 30hpf_20170602_bath study 30hpf 06-04-17 strip b plate 1_ _01.RCC


title: Embryo 30hpf_20170602_bath study 30hpf 06-04-17 strip b plate 1_ _05.RCC


title: Embryo 30hpf_20170602_bath study 30hpf 06-04-17 strip b plate 1_ _12.RCC


title: Embryo 30hpf_20170602_bath study 30hpf 06-04-17 strip b plate 1_ _06.RCC


title: Embryo 30hpf_20170602_bath study 30hpf 06-04-17 strip a plate 1_ _06.RCC


title: Embryo 30hpf_20170602_bath study 30hpf 06-04-17 strip a plate 1_ _05.RCC


title: Embryo 30hpf_20170602_bath study 30hpf 06-04-17 strip a plate 1_ _07.RCC


title: Embryo 72hpf_20160727_bath study 72hpf stripA 15-04-16_ _12.RCC


title: Embryo 30hpf_20170602_bath study 30hpf 06-04-17 strip a plate 1_ _01.RCC


title: Embryo 30hpf_20170602_bath study 30hpf 06-04-17 strip b plate 1_ _03.RCC


title: Embryo 72hpf_20160727_bath study 72hpf stripB 15-04-16_ _12.RCC


title: Embryo 30hpf_20170602_bath study 30hpf 06-04-17 strip b plate 1_ _11.RCC


title: Embryo 72hpf_20161005_bath study 72hpf mc-ip 15-09-16 strip B_ _02.RCC


title: Embryo 72hpf_20160727_bath study 72hpf stripA 15-04-16_ _06.RCC


title: Embryo 72hpf_20160727_bath study 72hpf stripA 15-04-16_ _05.RCC


title: Embryo 72hpf_20160727_bath study 72hpf stripA 15-04-16_ _10.RCC


title: Embryo 30hpf_20160902_bath study 30hpf 13-04 samples 49-60_ _11.RCC


title: Embryo 30hpf_20160902_bath study 30hpf 13-04 samples 49-60_ _10.RCC


title: Embryo 72hpf_20160727_bath study 72hpf stripB 15-04-16_ _02.RCC


title: Embryo 30hpf_20160902_bath study 30hpf 13-04 samples 49-60_ _08.RCC


title: Embryo 30hpf_20160902_bath study 30hpf 13-04 samples 49-60_ _06.RCC


title: Embryo 30hpf_20170602_bath study 30hpf 06-04-17 strip b plate 1_ _07.RCC


title: Embryo 30hpf_20170602_bath study 30hpf 06-04-17 strip a plate 1_ _11.RCC


title: Embryo 30hpf_20160902_bath study 30hpf 13-04 samples 49-60_ _05.RCC


title: Embryo 30hpf_20170602_bath study 30hpf 06-04-17 strip a plate 1_ _03.RCC


title: Embryo 30hpf_20170602_bath study 30hpf 06-04-17 strip a plate 1_ _12.RCC


title: Embryo 72hpf_20160727_bath study 72hpf stripA 15-04-16_ _07.RCC


title: Embryo 30hpf_20170602_bath study 30hpf 06-04-17 strip a plate 1_ _10.RCC


title: Embryo 24hpf_20170609_bath study 24hpf 05-05-17 strip e tails_ _12.RCC


title: Embryo 24hpf_20170609_bath study 24hpf 05-05-17 strip e tails_ _11.RCC


title: Embryo 72hpf_20160727_bath study 72hpf stripA 15-04-16_ _02.RCC


title: Embryo 30hpf_20160902_bath study 30hpf 13-04 samples 49-60_ _12.RCC


title: Embryo 30hpf_20160902_bath study 30hpf 13-04 samples 49-60_ _01.RCC


title: Embryo 72hpf_20160727_bath study 72hpf stripA 15-04-16_ _01.RCC


title: Embryo 30hpf_20170602_bath study 30hpf 06-04-17 strip a plate 1_ _08.RCC


title: Embryo 30hpf_20160902_bath study 30hpf 13-04 samples 49-60_ _02.RCC


title: Embryo 72hpf_20160727_bath study 72hpf stripA 15-04-16_ _09.RCC


title: Embryo 30hpf_20160902_bath study 30hpf 13-04 samples 49-60_ _03.RCC


title: Embryo 24hpf_20170609_bath study 24hpf 05-05-17 strip e tails_ _09.RCC


title: Embryo 72hpf_20160811_bath study 72hpf 15-04-16 samples 41-52_   _08.RCC


title: Embryo 24hpf_20170609_bath study 24hpf 05-05-17 strip e tails_ _01.RCC


title: Embryo 72hpf_20160811_bath study 72hpf 15-04-16 samples 41-52_   _12.RCC


title: Embryo 24hpf_20170609_bath study 24hpf 05-05-17 strip e tails_ _04.RCC


title: Embryo 30hpf_20160902_bath study 30hpf 13-04 samples 49-60_ _09.RCC


title: Embryo 24hpf_20170609_bath study 24hpf 05-05-17 strip e tails_ _10.RCC


title: Embryo 72hpf_20160727_bath study 72hpf stripA 15-04-16_ _03.RCC


title: Embryo 72hpf_20160727_bath study 72hpf stripA 15-04-16_ _04.RCC


title: Embryo 72hpf_20160811_bath study 72hpf 15-04-16 samples 41-52_   _04.RCC


title: Embryo 72hpf_20160811_bath study 72hpf 15-04-16 samples 41-52_   _01.RCC


title: Embryo 36hpf_20160610_bath study 36hpf 26-06-16 strip1_ 12_12.RCC


title: Embryo 36hpf_20160610_bath study 36hpf 26-06-16 strip1_ 11_11.RCC


title: Embryo 24hpf_20170609_bath study 24hpf 05-05-17 strip e tails_ _06.RCC


title: Embryo 24hpf_20170609_bath study 24hpf 05-05-17 strip e tails_ _02.RCC


title: Embryo 72hpf_20160811_bath study 72hpf 15-04-16 samples 41-52_   _09.RCC


title: Embryo 24hpf_20170609_bath study 24hpf 05-05-17 strip e tails_ _07.RCC


title: Embryo 36hpf_20160610_bath study 36hpf 26-06-16 strip1_ 3_03.RCC


title: Embryo 36hpf_20160825_bath study 36hpf 26-06-16 strip 2_ _12.RCC


title: Embryo 36hpf_20160610_bath study 36hpf 26-06-16 strip1_ 4_04.RCC


title: Embryo 36hpf_20160610_bath study 36hpf 26-06-16 strip1_ 6_06.RCC


title: Embryo 72hpf_20160811_bath study 72hpf 15-04-16 samples 41-52_   _10.RCC


title: Embryo 36hpf_20160825_bath study 36hpf 26-06-16 strip 2_ _11.RCC


title: Embryo 36hpf_20160610_bath study 36hpf 26-06-16 strip1_ 9_09.RCC


title: Embryo 72hpf_20160811_bath study 72hpf 15-04-16 samples 41-52_   _06.RCC


title: Embryo 72hpf_20160811_bath study 72hpf 15-04-16 samples 41-52_   _03.RCC


title: Embryo 72hpf_20160811_bath study 72hpf 15-04-16 samples 41-52_   _11.RCC


title: Embryo 36hpf_20160610_bath study 36hpf 26-06-16 strip1_ 8_08.RCC


title: Embryo 72hpf_20160811_bath study 72hpf 15-04-16 samples 41-52_   _02.RCC


title: Embryo 24hpf_20170609_bath study 24hpf 05-05-17 strip e tails_ _08.RCC


title: Embryo 72hpf_20160811_bath study 72hpf 15-04-16 samples 41-52_   _07.RCC


title: Embryo 36hpf_20160610_bath study 36hpf 26-06-16 strip1_ 2_02.RCC


title: Embryo 36hpf_20160825_bath study 36hpf 26-06-16 strip 2_ _03.RCC


title: Embryo 36hpf_20160825_bath study 36hpf 26-06-16 strip 2_ _02.RCC


title: Embryo 36hpf_20160610_bath study 36hpf 26-06-16 strip1_ 5_05.RCC


title: Embryo 24hpf_20170609_bath study 24hpf 05-05-17 strip e tails_ _03.RCC


title: Embryo 36hpf_20160610_bath study 36hpf 26-06-16 strip1_ 1_01.RCC


title: Embryo 36hpf_20160610_bath study 36hpf 26-06-16 strip1_ 7_07.RCC


title: Embryo 36hpf_20160825_bath study 36hpf 26-06-16 strip 2_ _10.RCC


title: Embryo 60hpf_20160824_bath study 60hpf strip 3 26-05_ _07.RCC


title: Embryo 36hpf_20160610_bath study 36hpf 26-06-16 strip1_ 10 _10.RCC


title: Embryo 60hpf_20160824_bath study 60hpf strip 3 26-05_ _02.RCC


title: Embryo 48hpf_20160527_bath study 48hpf plate1 1-12_ 2_02.RCC


title: Embryo 60hpf_20160824_bath study 60hpf strip 3 26-05_ _01.RCC


title: Embryo 36hpf_20160825_bath study 36hpf 26-06-16 strip 2_ _09.RCC


title: Embryo 60hpf_20160824_bath study 60hpf strip 3 26-05_ _03.RCC


title: Embryo 36hpf_20160825_bath study 36hpf 26-06-16 strip 2_ _05.RCC


title: Embryo 36hpf_20160825_bath study 36hpf 26-06-16 strip 2_ _07.RCC


title: Embryo 60hpf_20160824_bath study 60hpf strip 3 26-05_ _06.RCC


title: Embryo 36hpf_20160825_bath study 36hpf 26-06-16 strip 2_ _04.RCC


title: Embryo 36hpf_20160825_bath study 36hpf 26-06-16 strip 2_ _06.RCC


title: Embryo 30hpf_20160816_bath study 30hpf 13-04 samples 25-36_  _10.RCC


title: Embryo 36hpf_20160825_bath study 36hpf 26-06-16 strip 2_ _08.RCC


title: Embryo 60hpf_20160824_bath study 60hpf strip 3 26-05_ _12.RCC


title: Embryo 30hpf_20160816_bath study 30hpf 13-04 samples 25-36_  _05.RCC


title: Embryo 30hpf_20160816_bath study 30hpf 13-04 samples 25-36_  _07.RCC


title: Embryo 30hpf_20160816_bath study 30hpf 13-04 samples 25-36_  _06.RCC


title: Embryo 60hpf_20160824_bath study 60hpf strip 3 26-05_ _08.RCC


title: Embryo 60hpf_20160824_bath study 60hpf strip 3 26-05_ _11.RCC


title: Embryo 60hpf_20160824_bath study 60hpf strip 3 26-05_ _04.RCC


title: Embryo 30hpf_20160816_bath study 30hpf 13-04 samples 25-36_  _02.RCC


title: Embryo 60hpf_20160824_bath study 60hpf strip 3 26-05_ _09.RCC


title: Embryo 24hpf_20161013_bath study 24hpf 22-09-16 strip B_ _11.RCC


title: Embryo 24hpf_20161013_bath study 24hpf 22-09-16 strip B_ _08.RCC


title: Embryo 60hpf_20160824_bath study 60hpf strip 3 26-05_ _05.RCC


title: Embryo 24hpf_20161013_bath study 24hpf 22-09-16 stripA_ _06.RCC


title: Embryo 24hpf_20161013_bath study 24hpf 22-09-16 stripA_ _07.RCC


title: Embryo 24hpf_20161013_bath study 24hpf 22-09-16 stripA_ _08.RCC


title: Embryo 36hpf_20160825_bath study 36hpf 26-06-16 strip 2_ _01.RCC


title: Embryo 60hpf_20160824_bath study 60hpf strip 3 26-05_ _10.RCC


title: Embryo 24hpf_20161013_bath study 24hpf 22-09-16 stripA_ _12.RCC


title: Embryo 24hpf_20161013_bath study 24hpf 22-09-16 stripA_ _11.RCC


title: Embryo 30hpf_20160816_bath study 30hpf 13-04 samples 25-36_  _12.RCC


title: Embryo 30hpf_20160816_bath study 30hpf 13-04 samples 25-36_  _09.RCC


title: Embryo 30hpf_20170509_bath study 30hpf 06-04-17 strip b plate 2_ _09.RCC


title: Embryo 30hpf_20160816_bath study 30hpf 13-04 samples 25-36_  _11.RCC


title: Embryo 24hpf_20161013_bath study 24hpf 22-09-16 stripA_ _03.RCC


title: Embryo 30hpf_20170509_bath study 30hpf 06-04-17 strip b plate 2_ _12.RCC


title: Embryo 30hpf_20160816_bath study 30hpf 13-04 samples 25-36_  _01.RCC


title: Embryo 30hpf_20170509_bath study 30hpf 06-04-17 strip b plate 2_ _06.RCC


title: Embryo 30hpf_20170509_bath study 30hpf 06-04-17 strip b plate 2_ _08.RCC


title: Embryo 30hpf_20170509_bath study 30hpf 06-04-17 strip b plate 2_ _07.RCC


title: Embryo 24hpf_20161013_bath study 24hpf 22-09-16 strip B_ _06.RCC


title: Embryo 24hpf_20161013_bath study 24hpf 22-09-16 strip B_ _05.RCC


title: Embryo 30hpf_20170509_bath study 30hpf 06-04-17 strip b plate 2_ _03.RCC


title: Embryo 30hpf_20160816_bath study 30hpf 13-04 samples 25-36_  _08.RCC


title: Embryo 30hpf_20170509_bath study 30hpf 06-04-17 strip a plate 2_ _12.RCC


title: Embryo 30hpf_20170509_bath study 30hpf 06-04-17 strip b plate 2_ _02.RCC


title: Embryo 30hpf_20170509_bath study 30hpf 06-04-17 strip b plate 2_ _01.RCC


title: Embryo 24hpf_20161013_bath study 24hpf 22-09-16 strip B_ _04.RCC


title: Embryo 24hpf_20161013_bath study 24hpf 22-09-16 strip B_ _07.RCC


title: Embryo 24hpf_20161013_bath study 24hpf 22-09-16 stripA_ _04.RCC


title: Embryo 30hpf_20160816_bath study 30hpf 13-04 samples 25-36_  _04.RCC


title: Embryo 30hpf_20170509_bath study 30hpf 06-04-17 strip a plate 2_ _06.RCC


title: Embryo 30hpf_20170509_bath study 30hpf 06-04-17 strip b plate 2_ _11.RCC


title: Embryo 30hpf_20170509_bath study 30hpf 06-04-17 strip a plate 2_ _10.RCC


title: Embryo 30hpf_20170509_bath study 30hpf 06-04-17 strip b plate 2_ _10.RCC


title: Embryo 18hpf_20160524_bath study 18hpf plate1 1-12_ 6_06.RCC


title: Embryo 24hpf_20161013_bath study 24hpf 22-09-16 strip B_ _09.RCC


title: Embryo 30hpf_20170509_bath study 30hpf 06-04-17 strip b plate 2_ _04.RCC


title: Embryo 21hpf_20160809_bath study 21hpf 06-04-16 samples 25-36_ 1_09.RCC


title: Embryo 21hpf_20160809_bath study 21hpf 06-04-16 samples 25-36_ 1_08.RCC


title: Embryo 21hpf_20160809_bath study 21hpf 06-04-16 samples 25-36_ 1_06.RCC


title: Embryo 30hpf_20170509_bath study 30hpf 06-04-17 strip a plate 2_ _03.RCC


title: Embryo 30hpf_20170509_bath study 30hpf 06-04-17 strip a plate 2_ _08.RCC


title: Embryo 30hpf_20170509_bath study 30hpf 06-04-17 strip a plate 2_ _11.RCC


title: Embryo 21hpf_20160809_bath study 21hpf 06-04-16 samples 25-36_ 1_10.RCC


title: Embryo 21hpf_20160809_bath study 21hpf 06-04-16 samples 25-36_ 1_03.RCC


title: Embryo 21hpf_20160809_bath study 21hpf 06-04-16 samples 25-36_ 1_01.RCC


title: Embryo 21hpf_20160809_bath study 21hpf 06-04-16 samples 25-36_ 1_07.RCC


title: Embryo 30hpf_20170509_bath study 30hpf 06-04-17 strip b plate 2_ _05.RCC


title: Embryo 30hpf_20170509_bath study 30hpf 06-04-17 strip a plate 2_ _04.RCC


title: Embryo 21hpf_20160809_bath study 21hpf 06-04-16 samples 25-36_ 1_12.RCC


title: Embryo 21hpf_20160809_bath study 21hpf 06-04-16 samples 13-24 _ 1_09.RCC


title: Embryo 30hpf_20170509_bath study 30hpf 06-04-17 strip a plate 2_ _09.RCC


title: Embryo 30hpf_20170509_bath study 30hpf 06-04-17 strip a plate 2_ _02.RCC


title: Embryo 30hpf_20170509_bath study 30hpf 06-04-17 strip a plate 2_ _01.RCC


title: Embryo 21hpf_20160809_bath study 21hpf 06-04-16 samples 25-36_ 1_02.RCC


title: Embryo 21hpf_20160809_bath study 21hpf 06-04-16 samples 13-24 _ 1_04.RCC


title: Embryo 21hpf_20160809_bath study 21hpf 06-04-16 samples 13-24 _ 1_10.RCC


title: Embryo 30hpf_20170509_bath study 30hpf 06-04-17 strip a plate 2_ _05.RCC


title: Embryo 18hpf_20160726_bath study 18hpf strip A 1-12 25-05-16_ _08.RCC


title: Embryo 18hpf_20160726_bath study 18hpf strip A 1-12 25-05-16_  _07.RCC


title: Embryo 21hpf_20160809_bath study 21hpf 06-04-16 samples 13-24 _ 1_08.RCC


title: Embryo 18hpf_20160726_bath study 18hpf strip A 1-12 25-05-16_ _04.RCC


title: Embryo 18hpf_20160524_bath study 18hpf plate1 1-12_ 8_08.RCC


title: Embryo 21hpf_20160809_bath study 21hpf 06-04-16 samples 25-36_ 1_05.RCC


title: Embryo 18hpf_20160726_bath study 18hpf strip A 1-12 25-05-16_ _05.RCC


title: Embryo 18hpf_20160726_bath study 18hpf strip A 1-12 25-05-16_ _06.RCC


title: Embryo 60hpf_20161018_bath study 60hpf 29-09-16 stripC_  _12.RCC


title: Embryo 21hpf_20160809_bath study 21hpf 06-04-16 samples 25-36_ 1_04.RCC


title: Embryo 18hpf_20160726_bath study 18hpf strip A 1-12 25-05-16_   _01.RCC


title: Embryo 60hpf_20161018_bath study 60hpf 29-09-16 stripC_  _07.RCC


title: Embryo 21hpf_20160809_bath study 21hpf 06-04-16 samples 13-24 _ 1_11.RCC


title: Embryo 21hpf_20160809_bath study 21hpf 06-04-16 samples 13-24 _ 1_12.RCC


title: Embryo 21hpf_20160809_bath study 21hpf 06-04-16 samples 13-24 _ 1_07.RCC


title: Embryo 18hpf_20160726_bath study 18hpf strip A 1-12 25-05-16_ _02.RCC


title: Embryo 60hpf_20161018_bath study 60hpf 29-09-16 stripC_  _03.RCC


title: Embryo 60hpf_20161018_bath study 60hpf 29-09-16 stripC_  _02.RCC


title: Embryo 60hpf_20161018_bath study 60hpf 29-09-16 stripC_  _01.RCC


title: Embryo 18hpf_20160726_bath study 18hpf strip A 1-12 25-05-16_ _03.RCC


title: Embryo 18hpf_20160726_bath study 18hpf strip A 1-12 25-05-16_ _11.RCC


title: Embryo 60hpf_20161018_bath study 60hpf 29-09-16 stripC_  _05.RCC


title: Embryo 60hpf_20161014_bath study 60hpf IP 29-09-16 Strip A_ _07.RCC


title: Embryo 21hpf_20160809_bath study 21hpf 06-04-16 samples 13-24 _ 1_01.RCC


title: Embryo 21hpf_20160809_bath study 21hpf 06-04-16 samples 13-24 _ 1_03.RCC


title: Embryo 60hpf_20161014_bath study 60hpf IP 29-09-16 Strip A_ _08.RCC


title: Embryo 18hpf_20160726_bath study 18hpf strip A 1-12 25-05-16_ _09.RCC


title: Embryo 60hpf_20161014_bath study 60hpf IP 29-09-16 Strip A_ _12.RCC


title: Embryo 60hpf_20161014_bath study 60hpf IP 29-09-16 Strip A_ _03.RCC


title: Embryo 18hpf_20160726_bath study 18hpf strip A 1-12 25-05-16_ _10.RCC


title: Embryo 60hpf_20161014_bath study 60hpf IP 29-09-16 Strip A_ _02.RCC


title: Embryo 60hpf_20161014_bath study 60hpf IP 29-09-16 Strip A_ _01.RCC


title: Embryo 60hpf_20161014_bath study 60hpf IP 29-09-16 Strip A_ _06.RCC


title: Embryo 21hpf_20160809_bath study 21hpf 06-04-16 samples 13-24 _ 1_05.RCC


title: Embryo 60hpf_20161014_bath study 60hpf 29-09-16 IP strip b_ _10.RCC


title: Embryo 60hpf_20161018_bath study 60hpf 29-09-16 stripC_  _06.RCC


title: Embryo 60hpf_20161014_bath study 60hpf 29-09-16 IP strip b_ _12.RCC


title: Embryo 60hpf_20161014_bath study 60hpf IP 29-09-16 Strip A_ _10.RCC


title: Embryo 60hpf_20161018_bath study 60hpf 29-09-16 stripC_  _08.RCC


title: Embryo 60hpf_20161014_bath study 60hpf 29-09-16 IP strip b_ _06.RCC


title: Embryo 60hpf_20161014_bath study 60hpf 29-09-16 IP strip b_ _07.RCC


title: Embryo 60hpf_20161014_bath study 60hpf 29-09-16 IP strip b_ _11.RCC


title: Embryo 48hpf_20160602_bath study new 48hpf 13-24_ 23_11.RCC


title: Embryo 48hpf_20160602_bath 48hpf new 25-36_33_09.RCC


title: Embryo 60hpf_20161014_bath study 60hpf IP 29-09-16 Strip A_ _11.RCC


title: Embryo 48hpf_20160602_bath study new 48hpf 13-24_ 20_08.RCC


title: Embryo 48hpf_20160602_bath study new 48hpf 13-24_ 21_09.RCC


title: Embryo 60hpf_20161018_bath study 60hpf 29-09-16 stripC_  _04.RCC


title: Embryo 60hpf_20161014_bath study 60hpf IP 29-09-16 Strip A_ _05.RCC


title: Embryo 48hpf_20160602_bath 48hpf new 25-36_ 36_12.RCC


title: Embryo 72hpf_20160819_bath study 72hpf 15-04 samples 65-76_73_09.RCC


title: Embryo 72hpf_20160819_bath study 72hpf 15-04 samples 65-76_75_11.RCC


title: Embryo 21hpf_20160525_bath study 21hpf -03-  1-12_ 2_02.RCC


title: Embryo 60hpf_20161014_bath study 60hpf 29-09-16 IP strip b_ _02.RCC


title: Embryo 60hpf_20161014_bath study 60hpf IP 29-09-16 Strip A_ _04.RCC


title: Embryo 36hpf_20160630_bath study 36hpf 13-04-16 samples 1-12_ 12_12.RCC


title: Embryo 48hpf_20160602_bath study new 48hpf 13-24_ 15_03.RCC


title: Embryo 48hpf_20160602_bath 48hpf new 25-36_27_03.RCC


title: Embryo 60hpf_20161014_bath study 60hpf 29-09-16 IP strip b_ _03.RCC


title: Embryo 72hpf_20160819_bath study 72hpf 15-04 samples 65-76_69_05.RCC


title: Embryo 60hpf_20161014_bath study 60hpf 29-09-16 IP strip b_ _08.RCC


title: Embryo 72hpf_20160819_bath study 72hpf 15-04 samples 65-76_76_12.RCC


title: Embryo 60hpf_20161014_bath study 60hpf IP 29-09-16 Strip A_ _09.RCC


title: Embryo 36hpf_20160630_bath study 36hpf 13-04-16 samples 1-12_ 10 _10.RCC


title: Embryo 60hpf_20161014_bath study 60hpf 29-09-16 IP strip b_ _04.RCC


title: Embryo 60hpf_20161014_bath study 60hpf 29-09-16 IP strip b_ _05.RCC


title: Embryo 36hpf_20160630_bath study 36hpf 13-04-16 samples 1-12_ 2_02.RCC


title: Embryo 36hpf_20160630_bath study 36hpf 13-04-16 samples 1-12_ 7_07.RCC


title: Embryo 36hpf_20160630_bath study 36hpf 13-04-16 samples 1-12_ 8_08.RCC


title: Embryo 72hpf_20160819_bath study 72hpf 15-04 samples 65-76_65_01.RCC


title: Embryo 60hpf_20161014_bath study 60hpf 29-09-16 IP strip b_ _09.RCC


title: Embryo 36hpf_20160630_bath study 36hpf 13-04-16 samples 1-12_ 3_03.RCC


title: Embryo 36hpf_20160630_bath study 36hpf 13-04-16 samples 1-12_ 9_09.RCC


title: Embryo 36hpf_20160630_bath study 36hpf 13-04-16 samples 1-12_ 11_11.RCC


title: Embryo 72hpf_20160819_bath study 72hpf 15-04 samples 65-76_67_03.RCC


title: Embryo 30hpf_20170531_bath study 30hpf 16-03-17 plate 3 strip d_ _12.RCC


title: Embryo 36hpf_20160630_bath study 36hpf 13-04-16 samples 1-12_ 5_05.RCC


title: Embryo 30hpf_20170531_bath study 30hpf 16-03-17 plate 3 strip d_ _09.RCC


title: Embryo 30hpf_20170531_bath study 30hpf 16-03-17 plate 3 strip d_ _07.RCC


title: Embryo 30hpf_20170531_bath study 30hpf 16-03-17 plate 3 strip d_ _08.RCC


title: Embryo 48hpf_20160608_bath 48hpf 07-04 37-48_39_03.RCC


title: Embryo 30hpf_20170531_bath study 30hpf 16-03-17 plate 3 strip d_ _03.RCC


title: Embryo 36hpf_20160630_bath study 36hpf 13-04-16 samples 1-12_ 4_04.RCC


title: Embryo 36hpf_20160630_bath study 36hpf 13-04-16 samples 1-12_ 1_01.RCC


title: Embryo 30hpf_20170531_bath study 30hpf 16-03-17 plate 3 strip d_ _01.RCC


title: Embryo 30hpf_20170531_bath study 30hpf 16-03-17 plate 3 strip d_ _05.RCC


title: Embryo 48hpf_20160608_bath 48hpf 07-04 37-48_ 38_02.RCC


title: Embryo 30hpf_20170531_bath study 30hpf 16-03-17 strip c plate 3_ _06.RCC


title: Embryo 30hpf_20170531_bath study 30hpf 16-03-17 strip c plate 3_ _11.RCC


title: Embryo 36hpf_20160630_bath study 36hpf 13-04-16 samples 1-12_ 6_06.RCC


title: Embryo 30hpf_20170531_bath study 30hpf 16-03-17 strip c plate 3_ _05.RCC


title: Embryo 18hpf_20160726_bath study 2-5ul unlabelled stripb 25-05-16_ _12.RCC


title: Embryo 48hpf_20160608_bath 48hpf 07-04 37-48_46_10.RCC


title: Embryo 30hpf_20170531_bath study 30hpf 16-03-17 plate 3 strip d_ _10.RCC


title: Embryo 30hpf_20170531_bath study 30hpf 16-03-17 strip c plate 3_ _04.RCC


title: Embryo 18hpf_20160726_bath study 2-5ul unlabelled stripb 25-05-16_ _08.RCC


title: Embryo 18hpf_20160726_bath study 2-5ul unlabelled stripb 25-05-16_ _07.RCC


title: Embryo 30hpf_20170531_bath study 30hpf 16-03-17 strip c plate 3_ _12.RCC


title: Embryo 30hpf_20170531_bath study 30hpf 16-03-17 strip c plate 3_ _07.RCC


title: Embryo 30hpf_20170531_bath study 30hpf 16-03-17 strip c plate 3_ _09.RCC


title: Embryo 30hpf_20170531_bath study 30hpf 16-03-17 strip c plate 3_ _03.RCC


title: Embryo 18hpf_20160726_bath study 2-5ul unlabelled stripb 25-05-16_ _01.RCC


title: Embryo 18hpf_20160726_bath study 2-5ul unlabelled stripb 25-05-16_ _11.RCC


title: Embryo 18hpf_20160726_bath study 2-5ul unlabelled stripb 25-05-16_ _10.RCC


title: Embryo 18hpf_20160726_bath study 2-5ul unlabelled stripb 25-05-16_ _09.RCC


title: Embryo 24hpf_20170601_bath study 24hpf 05-05-17 strip b tails_ _10.RCC


title: Embryo 24hpf_20170601_bath study 24hpf 05-05-17 strip b tails_ _02.RCC


title: Embryo 24hpf_20170601_bath study 24hpf 05-05-17 strip b tails_ _03.RCC


title: Embryo 30hpf_20170531_bath study 30hpf 16-03-17 strip c plate 3_ _02.RCC


title: Embryo 18hpf_20160726_bath study 2-5ul unlabelled stripb 25-05-16_ _02.RCC


title: Embryo 18hpf_20160726_bath study 2-5ul unlabelled stripb 25-05-16_ _06.RCC


title: Embryo 24hpf_20170601_bath study 24hpf 05-05-17 strip b tails_ _01.RCC


title: Embryo 24hpf_20170601_bath study 24hpf 27-04-17 strip a tails_ _10.RCC


title: Embryo 18hpf_20160726_bath study 2-5ul unlabelled stripb 25-05-16_ _05.RCC


title: Embryo 24hpf_20170601_bath study 24hpf 05-05-17 strip b tails_ _09.RCC


title: Embryo 24hpf_20170601_bath study 24hpf 05-05-17 strip b tails_ _12.RCC


title: Embryo 24hpf_20170601_bath study 24hpf 05-05-17 strip b tails_ _07.RCC


title: Embryo 24hpf_20170601_bath study 24hpf 05-05-17 strip b tails_ _11.RCC


title: Embryo 24hpf_20170601_bath study 24hpf 27-04-17 strip a tails_ _04.RCC


title: Embryo 18hpf_20160726_bath study 2-5ul unlabelled stripb 25-05-16_ _03.RCC


title: Embryo 24hpf_20170601_bath study 24hpf 05-05-17 strip b tails_ _04.RCC


title: Embryo 24hpf_20170601_bath study 24hpf 27-04-17 strip a tails_ _01.RCC


title: Embryo 24hpf_20170601_bath study 24hpf 05-05-17 strip b tails_ _08.RCC


title: Embryo 24hpf_20170601_bath study 24hpf 05-05-17 strip b tails_ _05.RCC


title: Embryo 48hpf_20160324_bath study 7 48hpf_ 35_11.RCC


title: Embryo 48hpf_20160324_bath study 7 48hpf_ 34_10.RCC


title: Embryo 24hpf_20170601_bath study 24hpf 27-04-17 strip a tails_ _08.RCC


title: Embryo 24hpf_20170601_bath study 24hpf 27-04-17 strip a tails_ _11.RCC


title: Embryo 24hpf_20170601_bath study 24hpf 27-04-17 strip a tails_ _09.RCC


title: Embryo 48hpf_20160324_bath study 7 48hpf_ 27_03.RCC


title: Embryo 36hpf_20160826_bath study 36hpf 13-04-16 samples 13-24_ _11.RCC


title: Embryo 24hpf_20170601_bath study 24hpf 27-04-17 strip a tails_ _02.RCC


title: Embryo 24hpf_20170601_bath study 24hpf 27-04-17 strip a tails_ _05.RCC


title: Embryo 36hpf_20160826_bath study 36hpf 13-04-16 samples 13-24_ _10.RCC


title: Embryo 36hpf_20160826_bath study 36hpf 13-04-16 samples 13-24_ _07.RCC


title: Embryo 36hpf_20160826_bath study 36hpf 13-04-16 samples 13-24_ _12.RCC


title: Embryo 48hpf_20160324_bath study 7 48hpf_ 30_06.RCC


title: Embryo 48hpf_20160324_bath study 8_ 39_03.RCC


title: Embryo 36hpf_20160826_bath study 36hpf 13-04-16 samples 13-24_ _05.RCC


title: Embryo 36hpf_20160826_bath study 36hpf 13-04-16 samples 13-24_ _04.RCC


title: Embryo 36hpf_20160826_bath study 36hpf 13-04-16 samples 13-24_ _02.RCC


title: Embryo 36hpf_20160826_bath study 36hpf 13-04-16 samples 13-24_ _09.RCC


title: Embryo 36hpf_20160826_bath study 36hpf 13-04-16 samples 13-24_ _08.RCC


title: Embryo 72hpf_20161007_bath study 72hpf mc-ip 15-09-16 strip e_ _04.RCC


title: Embryo 72hpf_20161007_bath study 72hpf mc-ip 15-09-16 strip e_ _07.RCC


title: Embryo 36hpf_20160826_bath study 36hpf 13-04-16 samples 13-24_ _01.RCC


title: Embryo 72hpf_20161007_bath study 72hpf mc-ip 15-09-16 strip e_ _06.RCC


title: Embryo 72hpf_20160728_bath study MC mixed 12-07-16_ 11_11.RCC


title: Embryo 72hpf_20161007_bath study 72hpf mc-ip 15-09-16 strip e_ _03.RCC


title: Embryo 72hpf_20160728_bath study MC mixed 12-07-16_ 9_09.RCC


title: Embryo 72hpf_20160728_bath study MC mixed 12-07-16_ 10 _10.RCC


title: Embryo 72hpf_20161007_bath study 72hpf mc-ip 15-09-16 strip e_ _10.RCC


title: Embryo 72hpf_20161007_bath study 72hpf mc-ip 15-09-16 strip e_ _12.RCC


title: Embryo 36hpf_20160826_bath study 36hpf 13-04-16 samples 13-24_ _06.RCC


title: Embryo 72hpf_20161005_bath study 72hpf mc-ip 15-09-16 strip B_ _01.RCC


title: Embryo 72hpf_20160805_bath study IP samples 13-24 12-07-16_24_12.RCC


title: Embryo 72hpf_20160805_bath study IP samples 13-24 12-07-16_ 16_04.RCC


title: Embryo 72hpf_20161006_bath study 72hpf mc-ip 15-09-16 strip D_ _04.RCC


title: Embryo 72hpf_20161006_bath study 72hpf mc-ip 15-09-16 strip D_ _10.RCC


title: Embryo 72hpf_20161006_bath study 72hpf mc-ip 15-09-16 strip D_ _09.RCC


title: Embryo 72hpf_20161006_bath study 72hpf mc-ip 15-09-16 strip D_ _08.RCC


title: Embryo 36hpf_20160826_bath study 36hpf 13-04-16 samples 13-24_ _03.RCC


title: Embryo 72hpf_20161006_bath study 72hpf mc-ip 15-09-16 strip D_ _03.RCC


title: Embryo 72hpf_20161006_bath study 72hpf mc-ip 15-09-16 strip D_ _07.RCC


title: Embryo 72hpf_20161006_bath study 72hpf mc-ip 15-09-16 strip D_ _11.RCC


title: Embryo 72hpf_20161006_bath study 72hpf mc-ip 15-09-16 strip D_ _12.RCC


title: Embryo 72hpf_20161006_bath study 72hpf mc-ip 15-09-16 strip D_ _02.RCC


title: Embryo 72hpf_20160805_bath study IP 12-07-16 samples 1-12_ 8_08.RCC


title: Embryo 24hpf_20160908_bath study 24hpf 06-04 samples 25-36_ _05.RCC


title: Embryo 24hpf_20160908_bath study 24hpf 06-04 samples 25-36_ _08.RCC


title: Embryo 72hpf_20161006_bath study 72hpf mc-ip 15-09-16 strip D_ _06.RCC


title: Embryo 24hpf_20160908_bath study 24hpf 06-04 samples 25-36_ _06.RCC


title: Embryo 72hpf_20161006_bath study 72hpf mc-ip 15-09-16 strip D_ _01.RCC


title: Embryo 24hpf_20160908_bath study 24hpf 06-04 13-24_ _04.RCC


title: Embryo 24hpf_20160908_bath study 24hpf 06-04 13-24_ _08.RCC


title: Embryo 24hpf_20160908_bath study 24hpf 06-04 13-24_ _11.RCC


title: Embryo 24hpf_20160908_bath study 24hpf 06-04 samples 25-36_ _04.RCC


title: Embryo 24hpf_20160908_bath study 24hpf 06-04 13-24_ _07.RCC


title: Embryo 30hpf_20160818_bath study 30hpf 15-05 samples 1-12_  _01.RCC


title: Embryo 48hpf_20160407_bath study new 48hpf_ 6_06.RCC


title: Embryo 30hpf_20160818_bath study 30hpf 15-05 samples 1-12_  _08.RCC


title: Embryo 48hpf_20160407_bath study new 48hpf_ 2_02.RCC


title: Embryo 48hpf_20160407_bath study new 48hpf 2_ 17_05.RCC


title: Embryo 48hpf_20160407_bath study new 48hpf_ 11_11.RCC


title: Embryo 36hpf_20160825_bath study 36hpf 26-06 strip 3_  _11.RCC


title: Embryo 36hpf_20160825_bath study 36hpf 26-06 strip 3_  _09.RCC


title: Embryo 30hpf_20160818_bath study 30hpf 15-05 samples 1-12_  _12.RCC


title: Embryo 30hpf_20170510_bath study 30hpf 06-04-17 strip d plate 2_ _12.RCC


title: Embryo 30hpf_20170510_bath study 30hpf 06-04-17 strip d plate 2_ _11.RCC


title: Embryo 36hpf_20160825_bath study 36hpf 26-06 strip 3_  _04.RCC


title: Embryo 30hpf_20170510_bath study 30hpf 06-04-17 strip d plate 2_ _06.RCC


title: Embryo 30hpf_20170510_bath study 30hpf 06-04-17 strip d plate 2_ _08.RCC


title: Embryo 36hpf_20160825_bath study 36hpf 26-06 strip 3_  _06.RCC


title: Embryo 30hpf_20170510_bath study 30hpf 06-04-17 strip d plate 2_ _05.RCC


title: Embryo 30hpf_20170510_bath study 30hpf 06-04-17 strip d plate 2_ _07.RCC


title: Embryo 36hpf_20160825_bath study 36hpf 26-06 strip 3_  _03.RCC


title: Embryo 36hpf_20160825_bath study 36hpf 26-06 strip 3_  _07.RCC


title: Embryo 30hpf_20170510_bath study 30hpf 06-04-17 strip d plate 2_ _09.RCC


title: Embryo 30hpf_20170510_bath study 30hpf 06-04-17 strip d plate 2_ _10.RCC


title: Embryo 36hpf_20160825_bath study 36hpf 26-06 strip 3_  _08.RCC


title: Embryo 24hpf_20160908_bath study 24hpf 06-04 13-24_ _03.RCC


title: Embryo 36hpf_20160825_bath study 36hpf 26-06 strip 3_  _12.RCC


title: Embryo 30hpf_20170510_bath study 30hpf 06-04-17 strip d plate 2_ _02.RCC


title: Embryo 30hpf_20170510_bath study 30hpf 06-04-17 strip d plate 2_ _03.RCC


title: Embryo 30hpf_20170510_bath study 30hpf 06-04-17 strip c plate 2_ _12.RCC


title: Embryo 30hpf_20170510_bath study 30hpf 06-04-17 strip d plate 2_ _01.RCC


title: Embryo 30hpf_20170510_bath study 30hpf 06-04-17 strip c plate 2_ _11.RCC


title: Embryo 30hpf_20170510_bath study 30hpf 06-04-17 strip d plate 2_ _04.RCC


title: Embryo 30hpf_20170510_bath study 30hpf 06-04-17 strip c plate 2_ _10.RCC


title: Embryo 30hpf_20170510_bath study 30hpf 06-04-17 strip c plate 2_ _07.RCC


title: Embryo 30hpf_20170510_bath study 30hpf 06-04-17 strip c plate 2_ _09.RCC


title: Embryo 30hpf_20170510_bath study 30hpf 06-04-17 strip c plate 2_ _08.RCC


title: Embryo 30hpf_20170510_bath study 30hpf 06-04-17 strip c plate 2_ _05.RCC


title: Embryo 30hpf_20170510_bath study 30hpf 06-04-17 strip c plate 2_ _06.RCC


title: Embryo 30hpf_20170510_bath study 30hpf 06-04-17 strip c plate 2_ _04.RCC


title: Embryo 30hpf_20170510_bath study 30hpf 06-04-17 strip c plate 2_ _03.RCC


title: Embryo 30hpf_20170510_bath study 30hpf 06-04-17 strip c plate 2_ _02.RCC


title: Embryo 72hpf_20160803_bath mc melano samples 25-36 12-07-16_24_12.RCC


title: Embryo 21hpf_20160802_bath study 21hpf 22-03-16 sample 13-24 _ _12.RCC


title: Embryo 30hpf_20170510_bath study 30hpf 06-04-17 strip c plate 2_ _01.RCC


title: Embryo 21hpf_20160802_Bath study 21HPF 22-03-16 samples 25-36_ 1_03.RCC


title: Embryo 72hpf_20160803_bath study mc samples13-24 12-07-16 melan_24_12.RCC


title: Embryo 21hpf_20160802_bath study 21hpf 22-03-16 sample 13-24 _ _08.RCC


title: Embryo 21hpf_20160802_Bath study 21HPF 22-03-16 samples 25-36_ 1_04.RCC


title: Embryo 21hpf_20160802_bath study 21hpf 22-03-16 sample 13-24 _ _05.RCC


title: Embryo 72hpf_20160803_bath study mc samples13-24 12-07-16 melan_ 23_11.RCC


title: Embryo 21hpf_20160802_Bath study 21HPF 22-03-16 samples 25-36_ 1_07.RCC


title: Embryo 21hpf_20160802_Bath study 21HPF 22-03-16 samples 25-36_ 1_05.RCC


title: Embryo 72hpf_20160803_bath study mc samples13-24 12-07-16 melan_ 20_08.RCC


title: Embryo 72hpf_20160803_bath mc melano samples 25-36 12-07-16_ 17_05.RCC


title: Embryo 21hpf_20160802_Bath study 21HPF 22-03-16 samples 25-36_ 1_08.RCC


title: Embryo 72hpf_20160803_bath mc melano samples 25-36 12-07-16_ 13_01.RCC


title: Embryo 72hpf_20160728_bath study MC mixed 12-07-16_ 2_02.RCC


title: Embryo 72hpf_20160728_bath study MC mixed 12-07-16_ 4_04.RCC


title: Embryo 72hpf_20160722_bath study mc 12-07-16  1-12_ 11_11.RCC


title: Embryo 72hpf_20160728_bath study MC mixed 12-07-16_ 6_06.RCC


title: Embryo 72hpf_20160728_bath study MC mixed 12-07-16_ 3_03.RCC


title: Embryo 72hpf_20160728_bath study MC mixed 12-07-16_ 1_01.RCC


title: Embryo 72hpf_20160728_bath study MC mixed 12-07-16_ 8_08.RCC


title: Embryo 48hpf_20160914_bath study 48hpf 07-04 indexed (08-04) s49-60_ 60_12.RCC


title: Embryo 72hpf_20160722_bath study mc 12-07-16  1-12_ 3_03.RCC


title: Embryo 24hpf_20170516_bath study 24hpf 27-04-17 strip c tails_ _12.RCC


title: Embryo 72hpf_20160728_bath study MC mixed 12-07-16_ 5_05.RCC


title: Embryo 72hpf_20160728_bath study MC mixed 12-07-16_ 7_07.RCC


title: Embryo 72hpf_20160803_bath study mc samples13-24 12-07-16 melan_ 16_04.RCC


title: Embryo 24hpf_20170516_bath study 24hpf 27-04-17 strip c tails_ _06.RCC


title: Embryo 24hpf_20170516_bath study 24hpf 27-04-17 strip c tails_ _11.RCC


title: Embryo 24hpf_20170516_bath study 24hpf 27-04-17 strip c tails_ _03.RCC


title: Embryo 24hpf_20170516_bath study 24hpf 27-04-17 strip c tails_ _04.RCC


title: Embryo 72hpf_20160722_bath study mc 12-07-16  1-12_ 12_12.RCC


title: Embryo 24hpf_20170516_bath study 24hpf 27-04-17 strip c tails_ _02.RCC


title: Embryo 24hpf_20170516_bath study 24hpf 27-04-17 strip b tails_ _11.RCC


title: Embryo 24hpf_20170516_bath study 24hpf 27-04-17 strip c tails_ _05.RCC


title: Embryo 24hpf_20170516_bath study 24hpf 27-04-17 strip c tails_ _09.RCC


title: Embryo 72hpf_20160722_bath study mc 12-07-16  1-12_ 4_04.RCC


title: Embryo 24hpf_20170516_bath study 24hpf 27-04-17 strip b tails_ _12.RCC


title: Embryo 24hpf_20170516_bath study 24hpf 27-04-17 strip b tails_ _07.RCC


title: Embryo 24hpf_20170516_bath study 24hpf 27-04-17 strip c tails_ _07.RCC


title: Embryo 24hpf_20170516_bath study 24hpf 27-04-17 strip b tails_ _01.RCC


title: Embryo 24hpf_20170516_bath study 24hpf 27-04-17 strip b tails_ _09.RCC


title: Embryo 24hpf_20170516_bath study 24hpf 27-04-17 strip b tails_ _10.RCC


title: Embryo 24hpf_20170516_bath study 24hpf 27-04-17 strip b tails_ _08.RCC


title: Embryo 24hpf_20170516_bath study 24hpf 27-04-17 strip c tails_ _08.RCC


title: Embryo 24hpf_20170607_bath study 24hpf 05-05-17 strip d tails_ _09.RCC


title: Embryo 24hpf_20170516_bath study 24hpf 27-04-17 strip b tails_ _06.RCC


title: Embryo 24hpf_20170607_bath study 24hpf 05-05-17 strip d tails_ _10.RCC


title: Embryo 24hpf_20170607_bath study 24hpf 05-05-17 strip d tails_ _04.RCC


title: Embryo 24hpf_20170607_bath study 24hpf 05-05-17 strip d tails_ _02.RCC


title: Embryo 24hpf_20170607_bath study 24hpf 05-05-17 strip d tails_ _03.RCC


title: Embryo 24hpf_20170607_bath study 24hpf 05-05-17 strip d tails_ _01.RCC


title: Embryo 24hpf_20170607_bath study 24hpf 05-05-17 strip d tails_ _06.RCC


title: Embryo 24hpf_20170607_bath study 24hpf 05-05-17 strip c tails_ _11.RCC


title: Embryo 24hpf_20170607_bath study 24hpf 05-05-17 strip c tails_ _10.RCC


title: Embryo 24hpf_20170607_bath study 24hpf 05-05-17 strip d tails_ _07.RCC


title: Embryo 24hpf_20170607_bath study 24hpf 05-05-17 strip d tails_ _11.RCC


title: Embryo 24hpf_20170607_bath study 24hpf 05-05-17 strip c tails_ _12.RCC


title: Embryo 24hpf_20170607_bath study 24hpf 05-05-17 strip d tails_ _08.RCC


title: Embryo 48hpf_20160928_bath study 48hpf MC 15-09-16 stripA_ _12.RCC


title: Embryo 24hpf_20170607_bath study 24hpf 05-05-17 strip c tails_ _09.RCC


title: Embryo 24hpf_20170607_bath study 24hpf 05-05-17 strip c tails_ _01.RCC


title: Embryo 24hpf_20170607_bath study 24hpf 05-05-17 strip c tails_ _06.RCC


title: Embryo 24hpf_20170607_bath study 24hpf 05-05-17 strip c tails_ _02.RCC


title: Embryo 48hpf_20160928_bath study 48hpf MC 15-09-16 stripA_ _08.RCC


title: Embryo 24hpf_20170607_bath study 24hpf 05-05-17 strip c tails_ _03.RCC


title: Embryo 30hpf_20170608_bath study 30hpf 06-04-17 strip d plate 1_ _12.RCC


title: Embryo 48hpf_20160928_bath study 48hpf MC 15-09-16 stripA_ _01.RCC


title: Embryo 24hpf_20170607_bath study 24hpf 05-05-17 strip c tails_ _05.RCC


title: Embryo 48hpf_20160928_bath study 48hpf MC 15-09-16 stripA_ _09.RCC


title: Embryo 48hpf_20160928_bath study 48hpf MC 15-09-16 stripA_ _06.RCC


title: Embryo 24hpf_20170607_bath study 24hpf 05-05-17 strip c tails_ _04.RCC


title: Embryo 48hpf_20160928_bath study 48hpf MC 15-09-16 stripA_ _11.RCC


title: Embryo 48hpf_20160928_bath study 48hpf MC 15-09-16 stripA_ _07.RCC


title: Embryo 48hpf_20160928_bath study 48hpf MC 15-09-16 stripA_ _04.RCC


title: Embryo 30hpf_20170608_bath study 30hpf 06-04-17 strip d plate 1_ _06.RCC


title: Embryo 48hpf_20160928_bath study 48hpf MC 15-09-16 stripA_ _02.RCC


title: Embryo 30hpf_20170608_bath study 30hpf 06-04-17 strip d plate 1_ _01.RCC


title: Embryo 30hpf_20170608_bath study 30hpf 06-04-17 strip c plate 1_ _06.RCC


title: Embryo 30hpf_20170608_bath study 30hpf 06-04-17 strip c plate 1_ _05.RCC


title: Embryo 30hpf_20170608_bath study 30hpf 06-04-17 strip d plate 1_ _08.RCC


title: Embryo 30hpf_20170608_bath study 30hpf 06-04-17 strip d plate 1_ _11.RCC


title: Embryo 24hpf_20170607_bath study 24hpf 05-05-17 strip c tails_ _07.RCC


title: Embryo 30hpf_20170608_bath study 30hpf 06-04-17 strip c plate 1_ _01.RCC


title: Embryo 48hpf_20160928_bath study 48hpf MC 15-09-16 stripA_ _03.RCC


title: Embryo 30hpf_20170608_bath study 30hpf 06-04-17 strip d plate 1_ _10.RCC


title: Embryo 30hpf_20170608_bath study 30hpf 06-04-17 strip d plate 1_ _07.RCC


title: Embryo 30hpf_20170512_bath study 30hpf 06-04-17 strip e plate 2_ _12.RCC

value: sox10 m618 mutants


title: Embryo 30hpf_20170512_bath study 30hpf 06-04-17 strip e plate 2_ _09.RCC


title: Embryo 30hpf_20170512_bath study 30hpf 06-04-17 strip e plate 2_ _05.RCC


title: Embryo 30hpf_20170512_bath study 30hpf 06-04-17 strip e plate 2_ _03.RCC


title: Embryo 30hpf_20170608_bath study 30hpf 06-04-17 strip c plate 1_ _02.RCC


title: Embryo 60hpf_20160824_bath study 60 hpf strip 4 26-05_ _11.RCC


title: Embryo 60hpf_20160824_bath study 60 hpf strip 4 26-05_ _07.RCC


title: Embryo 30hpf_20170512_bath study 30hpf 06-04-17 strip e plate 2_ _07.RCC


title: Embryo 30hpf_20170512_bath study 30hpf 06-04-17 strip e plate 2_ _06.RCC


title: Embryo 60hpf_20160824_bath study 60 hpf strip 4 26-05_ _09.RCC


title: Embryo 30hpf_20170512_bath study 30hpf 06-04-17 strip e plate 2_ _04.RCC


title: Embryo 30hpf_20170512_bath study 30hpf 06-04-17 strip e plate 2_ _02.RCC


title: Embryo 60hpf_20160824_bath study 60 hpf strip 4 26-05_ _12.RCC


title: Embryo 30hpf_20170512_bath study 30hpf 06-04-17 strip e plate 2_ _08.RCC


title: Embryo 30hpf_20170512_bath study 30hpf 06-04-17 strip e plate 2_ _01.RCC


title: Embryo 60hpf_20160824_bath study 60 hpf strip 4 26-05_ _10.RCC


title: Embryo 30hpf_20170512_bath study 30hpf 06-04-17 strip e plate 2_ _10.RCC


title: Embryo 60hpf_20160824_bath study 60 hpf strip 4 26-05_ _02.RCC


title: Embryo 60hpf_20160824_bath study 60 hpf strip 4 26-05_ _06.RCC


title: Embryo 60hpf_20160824_bath study 60 hpf strip 4 26-05_ _08.RCC


title: Embryo 30hpf_20170512_bath study 30hpf 06-04-17 strip e plate 2_ _11.RCC


title: Embryo 24hpf_20160216_bath study 1_ 9_09.RCC


title: Embryo 60hpf_20160824_bath study 60 hpf strip 4 26-05_ _04.RCC


title: Embryo 60hpf_20160824_bath study 60 hpf strip 4 26-05_ _03.RCC


title: Embryo 24hpf_20160216_bath study 1_ 6_06.RCC


title: Embryo 60hpf_20160824_bath study 60 hpf strip 4 26-05_ _05.RCC


title: Embryo 24hpf_20160216_bath study 1_ 3_03.RCC


title: Embryo 24hpf_20160216_bath study 1_ 7_07.RCC


title: Embryo 60hpf_20160824_bath study 60 hpf strip 4 26-05_ _01.RCC


title: Embryo 24hpf_20160624_bath study 24hpf 06-04 1-12_ 10 _10.RCC


title: Embryo 24hpf_20160216_bath study 1_ 10_10.RCC


title: Embryo 24hpf_20160216_bath study 1_ 8_08.RCC


title: Embryo 24hpf_20160216_bath study 1_ 2_02.RCC


title: Embryo 30hpf_20170503_bath study 30hpf 16-03-17 strip b plate 3_ _09.RCC


title: Embryo 24hpf_20160624_bath study 24hpf 06-04 1-12_ 9_09.RCC


title: Embryo 24hpf_20160624_bath study 24hpf 06-04 1-12_ 2_02.RCC


title: Embryo 24hpf_20160624_bath study 24hpf 06-04 1-12_ 3_03.RCC


title: Embryo 30hpf_20170503_bath study 30hpf 16-03-17 strip b plate 3_ _06.RCC


title: Embryo 30hpf_20170503_bath study 30hpf 16-03-17 strip b plate 3_ _03.RCC


title: Embryo 30hpf_20170503_bath study 30hpf 16-03-17 strip b plate 3_ _10.RCC


title: Embryo 30hpf_20170503_bath study 30hpf 16-03-17 strip b plate 3_ _07.RCC


title: Embryo 24hpf_20160624_bath study 24hpf 06-04 1-12_ 5_05.RCC


title: Embryo 30hpf_20170503_bath study 30hpf 16-03-17 strip b plate 3_ _08.RCC


title: Embryo 30hpf_20170503_bath study 30hpf 16-03-17 strip b plate 3_ _05.RCC


title: Embryo 30hpf_20170503_bath study 30hpf 16-03-17 strip b plate 3_ _04.RCC


title: Embryo 30hpf_20170503_bath study 30hpf 16-03-17 strip a plate 1_ _11.RCC


title: Embryo 30hpf_20170503_bath study 30hpf 16-03-17 strip a plate 1_ _09.RCC


title: Embryo 30hpf_20170503_bath study 30hpf 16-03-17 strip a plate 1_ _10.RCC


title: Embryo 30hpf_20170503_bath study 30hpf 16-03-17 strip b plate 3_ _02.RCC


title: Embryo 48hpf_20161012_bath study 48hpf 23-09 B and 24hpf 22-09 C_ _08.RCC


title: Embryo 30hpf_20170503_bath study 30hpf 16-03-17 strip a plate 1_ _07.RCC


title: Embryo 30hpf_20170503_bath study 30hpf 16-03-17 strip b plate 3_ _01.RCC


title: Embryo 48hpf_20161012_bath study 48hpf 23-09 B and 24hpf 22-09 C_ _11.RCC


title: Embryo 30hpf_20170503_bath study 30hpf 16-03-17 strip a plate 1_ _06.RCC


title: Embryo 30hpf_20170503_bath study 30hpf 16-03-17 strip a plate 1_ _04.RCC


title: Embryo 30hpf_20170503_bath study 30hpf 16-03-17 strip a plate 1_ _05.RCC


title: Embryo 30hpf_20170503_bath study 30hpf 16-03-17 strip a plate 1_ _08.RCC


title: Embryo 48hpf_20161012_bath study 48hpf 23-09 B and 24hpf 22-09 C_ _05.RCC


title: Embryo 48hpf_20161012_bath study 48hpf 23-09 B and 24hpf 22-09 C_ _04.RCC


title: Embryo 30hpf_20160816_bath study 30hpf 13-04 samples 13-24_ _12.RCC


title: Embryo 48hpf_20161012_bath study 48hpf 23-09 B and 24hpf 22-09 C_ _06.RCC


title: Embryo 48hpf_20161012_bath study 48hpf 23-09 B and 24hpf 22-09 C_ _03.RCC


title: Embryo 48hpf_20161012_bath study 48hpf 23-09 B and 24hpf 22-09 C_ _02.RCC


title: Embryo 30hpf_20160816_bath study 30hpf 13-04 samples 13-24_ _11.RCC


title: Embryo 48hpf_20161012_bath study 48hpf 23-09 B and 24hpf 22-09 C_ _07.RCC


title: Embryo 30hpf_20160816_bath study 30hpf 13-04 samples 13-24_ _04.RCC


title: Embryo 30hpf_20160816_bath study 30hpf 13-04 samples 13-24_ _06.RCC


title: Embryo 30hpf_20160816_bath study 30hpf 13-04 samples 13-24_ _05.RCC


title: Embryo 30hpf_20160816_bath study 30hpf 13-04 samples 13-24_ _08.RCC


title: Embryo 30hpf_20160816_bath study 30hpf 13-04 samples 13-24_ _09.RCC


title: Embryo 30hpf_20160816_bath study 30hpf 13-04 samples 13-24_ _03.RCC


title: Embryo 48hpf_20161012_bath study 48hpf 23-09 B and 24hpf 22-09 C_ _10.RCC


title: Embryo 30hpf_20160901_bath study 30hpf 13-04 samples 37-48_ 47_11.RCC


title: Embryo 30hpf_20160901_bath study 30hpf 13-04 samples 37-48_ 46_10.RCC


title: Embryo 30hpf_20160816_bath study 30hpf 13-04 samples 13-24_ _10.RCC


title: Embryo 30hpf_20160901_bath study 30hpf 13-04 samples 37-48_ 45_09.RCC


title: Embryo 30hpf_20160816_bath study 30hpf 13-04 samples 13-24_ _01.RCC


title: Embryo 30hpf_20160901_bath study 30hpf 13-04 samples 37-48_ 43_07.RCC


title: Embryo 30hpf_20160901_bath study 30hpf 13-04 samples 37-48_ 42_06.RCC


title: Embryo 30hpf_20160816_bath study 30hpf 13-04 samples 13-24_ _07.RCC


title: Embryo 30hpf_20160901_bath study 30hpf 13-04 samples 37-48_ 41_05.RCC


title: Embryo 30hpf_20160901_bath study 30hpf 13-04 samples 37-48_ 38_02.RCC


title: Embryo 30hpf_20160901_bath study 30hpf 13-04 samples 37-48_ 37_01.RCC


title: Embryo 30hpf_20170425_bath study 30hpf 16-03-17 strip a_ _09.RCC


title: Embryo 30hpf_20170425_bath study 30hpf 16-03-17 strip a_ _07.RCC


title: Embryo 30hpf_20170425_bath study 30hpf 16-03-17 strip a_ _06.RCC


title: Embryo 30hpf_20170425_bath study 30hpf 16-03-17 strip a_ _10.RCC


title: Embryo 30hpf_20170425_bath study 30hpf 16-03-17 strip a_ _08.RCC


title: Embryo 30hpf_20170425_bath study 30hpf 16-03-17 strip a_ _03.RCC


title: Embryo 30hpf_20160816_bath study 30hpf 13-04 samples 13-24_ _02.RCC


title: Embryo 30hpf_20170425_bath study 30hpf 16-03-17 strip a_ _05.RCC


title: Embryo 48hpf_20160928_bath study 48hpf mc 15-09-16 stripB_ _12.RCC


title: Embryo 30hpf_20170425_bath study 30hpf 16-03-17 strip a_ _04.RCC


title: Embryo 48hpf_20160928_bath study 48hpf mc 15-09-16 stripB_ _08.RCC


title: Embryo 48hpf_20160928_bath study 48hpf mc 15-09-16 stripB_ _06.RCC


title: Embryo 48hpf_20160928_bath study 48hpf mc 15-09-16 stripB_ _09.RCC


title: Embryo 48hpf_20160928_bath study 48hpf mc 15-09-16 stripB_ _07.RCC


title: Embryo 30hpf_20160901_bath study 30hpf 13-04 samples 37-48_ 44_08.RCC


title: Embryo 30hpf_20170608_bath study 30hpf 06-04-17 strip c plate 1_ _03.RCC


title: Embryo 48hpf_20160928_bath study 48hpf mc 15-09-16 stripB_ _11.RCC


title: Embryo 30hpf_20170425_bath study 30hpf 16-03-17 strip a_ _02.RCC


title: Embryo 48hpf_20160928_bath study 48hpf mc 15-09-16 stripB_ _03.RCC


title: Embryo 48hpf_20160928_bath study 48hpf mc 15-09-16 stripB_ _05.RCC


title: Embryo 24hpf_20170518_bath study 27-04-17 24hpf strip f tails_ _12.RCC


title: Embryo 48hpf_20160928_bath study 48hpf mc 15-09-16 stripB_ _02.RCC


title: Embryo 48hpf_20160928_bath study 48hpf mc 15-09-16 stripB_ _01.RCC


title: Embryo 24hpf_20170518_bath study 27-04-17 24hpf strip f tails_ _10.RCC


title: Embryo 24hpf_20170518_bath study 27-04-17 24hpf strip f tails_ _11.RCC


title: Embryo 24hpf_20170518_bath study 27-04-17 24hpf strip f tails_ _08.RCC


title: Embryo 24hpf_20170518_bath study 27-04-17 24hpf strip f tails_ _09.RCC


title: Embryo 24hpf_20170518_bath study 27-04-17 24hpf strip f tails_ _07.RCC


title: Embryo 48hpf_20160928_bath study 48hpf mc 15-09-16 stripB_ _04.RCC


title: Embryo 24hpf_20170518_bath study 27-04-17 24hpf strip f tails_ _04.RCC


title: Embryo 24hpf_20170518_bath study 27-04-17 24hpf strip f tails_ _06.RCC


title: Embryo 24hpf_20170518_bath study 27-04-17 24hpf strip f tails_ _03.RCC


title: Embryo 24hpf_20170518_bath study 27-04-17 24hpf strip f tails_ _02.RCC


title: Embryo 72hpf_20160916_bath study stripB 13-09-16_ _10.RCC


title: Embryo 72hpf_20160916_bath study stripB 13-09-16_ _08.RCC


title: Embryo 72hpf_20160916_bath study stripB 13-09-16_ _07.RCC


title: Embryo 24hpf_20170518_bath study 27-04-17 24hpf strip f tails_ _01.RCC


title: Embryo 72hpf_20160916_bath study stripB 13-09-16_ _06.RCC


title: Embryo 72hpf_20160916_bath study stripB 13-09-16_ _11.RCC


title: Embryo 72hpf_20160916_bath study stripB 13-09-16_ _03.RCC


title: Embryo 72hpf_20160916_bath study stripB 13-09-16_ _04.RCC


title: Embryo 72hpf_20160916_bath study stripB 13-09-16_ _05.RCC


title: Embryo 72hpf_20160916_bath study stripB 13-09-16_ _01.RCC


title: Embryo 72hpf_20160916_bath study stripB 13-09-16_ _12.RCC


title: Embryo 72hpf_20160916_bath study stripA 12-09-16_ _09.RCC


title: Embryo 72hpf_20160916_bath study stripB 13-09-16_ _02.RCC


title: Embryo 72hpf_20160916_bath study stripA 12-09-16_ _08.RCC


title: Embryo 72hpf_20160916_bath study stripA 12-09-16_ _07.RCC


title: Embryo 72hpf_20160916_bath study stripB 13-09-16_ _09.RCC


title: Embryo 60hpf_20160622_bath study 60hpf 26-05 strip1_ 8_08.RCC


title: Embryo 60hpf_20160622_bath study 60hpf 26-05 strip1_ 9_09.RCC


title: Embryo 60hpf_20160622_bath study 60hpf 26-05 strip1_ 10 _10.RCC


title: Embryo 60hpf_20160622_bath study 60hpf 26-05 strip1_ 11_11.RCC


title: Embryo 72hpf_20160916_bath study stripA 12-09-16_ _10.RCC


title: Embryo 60hpf_20160622_bath study 60hpf 26-05 strip1_ 12_12.RCC


title: Embryo 60hpf_20160622_bath study 60hpf 26-05 strip1_ 7_07.RCC


title: Embryo 72hpf_20160916_bath study stripA 12-09-16_ _11.RCC


title: Embryo 60hpf_20160622_bath study 60hpf 26-05 strip1_ 2_02.RCC


title: Embryo 60hpf_20160622_bath study 60hpf 26-05 strip1_ 3_03.RCC


title: Embryo 60hpf_20160622_bath study 60hpf 26-05 strip1_ 5_05.RCC


title: Embryo 60hpf_20160622_bath study 60hpf 26-05 strip1_ 4_04.RCC


title: Embryo 60hpf_20160622_bath study 60hpf 26-05 strip1_ 6_06.RCC


title: Embryo 60hpf_20160907_bath study 60hpf strip 5 26-05_ _09.RCC


title: Embryo 60hpf_20160907_bath study 60hpf strip 5 26-05_ _07.RCC


title: Embryo 60hpf_20160907_bath study 60hpf strip 5 26-05_ _12.RCC


title: Embryo 60hpf_20160907_bath study 60hpf strip 5 26-05_ _11.RCC


title: Embryo 60hpf_20160907_bath study 60hpf strip 5 26-05_ _08.RCC


title: Embryo 60hpf_20160907_bath study 60hpf strip 5 26-05_ _10.RCC


title: Embryo 60hpf_20160907_bath study 60hpf strip 5 26-05_ _05.RCC


title: Embryo 60hpf_20160907_bath study 60hpf strip 5 26-05_ _03.RCC


title: Embryo 60hpf_20160907_bath study 60hpf strip 5 26-05_ _06.RCC


title: Embryo mixed_20160914_bath study mixed _ _08.RCC


title: Embryo 60hpf_20160907_bath study 60hpf strip 5 26-05_ _02.RCC


title: Embryo mixed_20160914_bath study mixed _ _06.RCC


title: Embryo 60hpf_20160907_bath study 60hpf strip 5 26-05_ _01.RCC


title: Embryo mixed_20160914_bath study mixed _ _03.RCC


title: Embryo mixed_20160914_bath study mixed _ _04.RCC


title: Embryo mixed_20160914_bath study mixed _ _07.RCC


title: Embryo 60hpf_20160907_bath study 60hpf strip 5 26-05_ _04.RCC


title: Embryo mixed_20160914_bath study mixed _ _05.RCC


title: Embryo 24hpf_20170517_bath study 27-04-17 24hpf strip e tails_ _11.RCC


title: Embryo mixed_20160914_bath study mixed _ _01.RCC


title: Embryo 24hpf_20170517_bath study 27-04-17 24hpf strip e tails_ _07.RCC


title: Embryo 24hpf_20170517_bath study 27-04-17 24hpf strip e tails_ _10.RCC


title: Embryo 24hpf_20170517_bath study 27-04-17 24hpf strip e tails_ _08.RCC


title: Embryo 24hpf_20170517_bath study 27-04-17 24hpf strip e tails_ _12.RCC


title: Embryo 24hpf_20170517_bath study 27-04-17 24hpf strip e tails_ _03.RCC


title: Embryo 24hpf_20170517_bath study 24hpf 27-04-17 strip d tails_ _04.RCC


title: Embryo 24hpf_20170517_bath study 27-04-17 24hpf strip e tails_ _01.RCC


title: Embryo 24hpf_20170517_bath study 24hpf 27-04-17 strip d tails_ _10.RCC


title: Embryo 24hpf_20170517_bath study 24hpf 27-04-17 strip d tails_ _12.RCC


title: Embryo 24hpf_20170517_bath study 24hpf 27-04-17 strip d tails_ _06.RCC


title: Root tip, 220_rep3

type: SRA

city: Montpellier

first: Laurent

last: Laplaze

address: 911 avenue Agropolis

department: DIADE

country: France

institute: IRD

library_source: transcriptomic

data_processing:
Illumina RTA software used for basecalling.
Sequenced reads were trimmed for adaptor sequence
Splice junction mapping using TopHat2
Counting using HTSeq-count
Mapping was performed against predicted CDS available as PM.genechr.trans.cds
Genome_build: Pearl millet genome of reference IDs: 1532771 [UID] 5927848 [GenBank] ; ASM217483v2
Supplementary_files_format_and_content: Matrix table with raw gene counts for every gene and every sample

molecule: total RNA

organism: Cenchrus americanus

source_name: Root tip

growth_protocol: Plants were grown in hydropony in 1/2 Hoagland solution at 27 °C (12 h light/12 h dark)

extract_protocol:
RNA were extracted using the RNEasy kit (Qiagen)
Libraries were constructed with the TruSeq Stranded mRNA Sample Preparation (Illumina)

value: Crown root tip (2 cm apex)

tag: line

tag: phenotype

value: low root soil aggregation

tag: developmental stage

value: 15 days after germination

tag: growth conditions

value: Hydropony


title: Embryo 24hpf_20170517_bath study 27-04-17 24hpf strip e tails_ _09.RCC


title: Root tip, 220_rep2


title: Embryo 24hpf_20170517_bath study 24hpf 27-04-17 strip d tails_ _09.RCC


title: Embryo 24hpf_20170517_bath study 24hpf 27-04-17 strip d tails_ _08.RCC


title: Embryo 24hpf_20170517_bath study 24hpf 27-04-17 strip d tails_ _07.RCC


title: Embryo 24hpf_20170517_bath study 24hpf 27-04-17 strip d tails_ _02.RCC


title: Embryo 24hpf_20170517_bath study 24hpf 27-04-17 strip d tails_ _03.RCC


title: Embryo 24hpf_20170512_bath study 24hpf 27-04-17 strip a tails_ _11.RCC


title: Root tip, 220_rep1


title: Embryo 24hpf_20170512_bath study 24hpf 27-04-17 strip a tails_ _10.RCC


title: L1008C Fibroblast RNA-seq

city: London

first: Michael

middle: R.

last: Duchen

address: Gower Street

department: Cell and Developmetal Biology

country: United Kingdom

institute: University College London

data_processing:
The analysis is performed using the R software [1], Bioconductor [2] packages including DESeq2 [3,4] and the SARTools package developed at PF2 - Institut Pasteur.
Normalization and differential analysis are carried out according to the DESeq2 model and package.
Genome_build: GRCh38
Supplementary_files_format_and_content: This report comes with additional tab-delimited text files that contain lists of differentially expressed features.

organism: Homo sapiens

source_name: Fibroblasts

growth_protocol: Control and patient fibroblasts were cultured in Dulbecco’s modified Eagle’s medium (Gibco #10566016) supplemented with 10% fetal bovine serum (Gibco #16140071), and 1% Antibiotic-Antimycotic (Gibco #15240096) and incubated at 37 °C with 5% CO2. Cells were cultured in T175 and passaged every 3-4 days at 80% confluence and trypsinised using 0.25% trypsin-EDTA (Gibco #25200056).

extract_protocol:
Cells (1*10^6) were seededin 10 cm plate one day before RNA extraction. Qiagen RNeasy Kit #74104 was used for RNA extraction.
RNA libraries were prepared for sequencing using standard Illumina protocols

tag: cell type

value: Fibroblasts

tag: clinical symptons

value: diabetes, sensorineural deafness, cerebellar ataxia, myopathy, epilepsy, depression and cognitive impairment


title: Embryo 24hpf_20170517_bath study 27-04-17 24hpf strip e tails_ _05.RCC


title: Embryo 24hpf_20170512_bath study 24hpf 27-04-17 strip a tails_ _12.RCC


title: Root tip, 249_rep1

value: high root soil aggregation


title: L1007B Fibroblast RNA-seq

value: diabetes, myoclonus, sensorineural hearing loss, memory decline, myopathy, pigmentary retinopathy and bipolar affective disorder


title: Embryo 24hpf_20170517_bath study 27-04-17 24hpf strip e tails_ _06.RCC


title: L1008A Fibroblast RNA-seq


title: Root tip, 249_rep2


title: L1007C Fibroblast RNA-seq


title: AD_HN4_rep3

city: Fuzhou

first: jing

middle: xian

last: yue

address: No.15 Shangxiadian Road

country: China

institute: Fujian Agriculture and Forestry University

data_processing:
Quality control.   Raw data (raw reads) of fastq format were firstly processed through in-house perl scripts.  In  this  step,  clean  data  (clean  reads)  were  obtained  by  removing  reads containing adapter, reads containing ploy-N and low  Reads mapping to the reference genome . quality reads from raw data. At the  same  time,  Q20,  Q30  and  GC  content  the  clean  data  were  calculated.  All  the downstream analyses were based on the clean data with high quality.
Reads mapping to the reference genome. Reference  genome  and  gene  model  annotation  files  were  downloaded  from genome website directly. Both building index of reference genome and aligning clean reads to reference genome were used Bowtie2-2.2.3.
Novel gene and gene structure analysing. Rockhopper was used to identify novel genes, operon, TSS, TTS and Cis-natural antisense transcripts. It can be used for efficient and accurate analysis of bacterial RNA-seq  data,  and  that  it  can  aid  with  elucidation  of  bacterial  transcriptomes.  Then,  we extract upstream 700bp sequence of Transcription Start Site for predicting promoter using TDNN.(Time-DelayNeural Network)
Quantification of gene expression level.HTSeq v0.6.1 was used to count the reads numbers mapped to each gene. And then FPKM of each gene was calculated based on the length of the gene and reads count mapped to this gene. FPKM, expected number of Fragments Per Kilobase of transcript sequence per Millions base pairs sequenced, considers the effect of sequencing depth and  gene  length  for  the  reads  count  at  the  same  time,  and  is  currently  the  most commonly used method for estimating gene expression levels
Differential expression analysis.  (For  DESeq  with  biological  replicates)  Differential  expression  analysis  of  two conditions/groups (two biological replicates per condition) was performed using the DESeq  R  package  (1.18.0).  DESeq  provide  statistical  routines  for  determining differential  expression  in  digital  gene  expression  data  using  a  model  based  on  the negative  binomial  distribution.  The  resulting  P-values  were  adjusted  using  the Benjamini and Hochberg’s approach for controlling the false discovery rate . Genes with  an  adjusted  P-value  <0.05  found  by  DESeq  were  assigned  as  differentially expressed.   (For  edgeR  without  biological  replicates)  Prior  to  differential  gene  expression analysis, for each sequenced library, the read counts were adjusted by edgeR program package through one scaling normalized factor. Differential expression analysis of two conditions  was  performed  using  the  edgeR  R  package  (3.22.5).  the  P  values  were adjusted using the TMM(trimmed mean of M-valucted P-value of 0.05 and log2(Fold change) of 1 were set as the threshold for significantly differential expression.
Genome_build: https://www.ncbi.nlm.nih.gov/nuccore/CP002031.1
Supplementary_files_format_and_content: tab-delimited text files include FPKM values for each Sample

organism: Geobacter sulfurreducens KN400

source_name: Geobacter sulfurreducens

growth_protocol: Three electrodes of two-chambered H-shaped cells with a liquid volume of 60 mL and a headspace volume of 90 mL in each chamber were assembled as previously described (Jing et al. 2019). The anode and cathode were made of graphite plates (2 × 3 × 0.3 cm) (JingLong Special Carbon, Beijing, China), which were polished using sandpaper (grit type 400), sonicated for 30 mins, soaked in 1 M HCl overnight and then rinsed at least five times with Milli-Q water. A saturated calomel electrode (SCE) was used as the reference electrode. The electrolyte was freshwater medium (FWNN medium) buffered with carbonate as previously reported (Nevin et al. 2009), except that the anolyte was supplied with 12 mM sodium acetate. To perform the BNF test, NH4Cl was eliminated from the anolyte. The reactor was autoclaved at 121 °C for 30 min and then purged with sterile N2-CO2 (80:20) for at least 30 min to remove oxygen and to saturate N2. Geobacter sulfurreducens strain KN400 was initially cultured in N-deficient NBAF medium (without NH4Cl) as previously reported (Liu et al. 2019). To start the process, 5 mL of bacterial cells in logarithmic phase was inoculated into the anode chamber, in which the anode was polarized at 0.3 V (vs. SCE) with a multichannel electrochemical workstation (CHI 1000 C, Shanghai, China). The current was recorded continuously and normalized to the maximum projected area of the anode. All experiments were conducted in triplicate at 30 °C, and the mean values were reported.

extract_protocol:
Cells on the anode were collected at the mid-log phase, and were flash frozen in liquid nitrogen then stored at -80C until needed. The total RNA was extracted using TRIzol reagent (Invitrogen, California, USA) as previously described (Liu et al. 2021)
A total amount of 3 μg RNA per sample was used as input material for the RNA sample preparations. Sequencing libraries were generated using NEBNext® UltraTM RNA  Library  Prep  Kit  for  Illumina®  (NEB,  USA)  following  manufacturer’s recommendations and index codes were added to attribute sequences to each sample.Briefly,  mRNA  was  purified  from  total  RNA  using  poly-T  oligo-attached magnetic beads. Fragmentation was carried out using divalent cations under elevated temperature  in  NEBNext  First  Strand  Synthesis  Reaction  Buffer(5X).  First  strand cDNA  was  synthesized  using  random  hexamer  primer  and  M-MuLV  Reverse Transcriptase(RNase H-). Second strand cDNA synthesis was subsequently performed using DNA Polymerase I and RNase H. Remaining  overhangs were  converted into blunt ends via exonuclease/polymerase activities. After adenylation of 3’ ends of DNA fragments, NEBNext Adaptor with hairpin loop structure were ligated to prepare for hybridization. Then USER Enzyme (NEB, USA) was ued to degrade the second strand of cDNA containing U, In rder to select cDNA fragments of preferentially 250~300 bp in length, the library fragments were purified with AMPure XP system (Beckman Coulter, Beverly, USA). Then PCR was performed with Phusion High-Fidelity DNA polymerase, Universal PCR primers and Index (X) Primer. At last, PCR products were purified  (AMPure  XP  system)  and  ibrary  quality  was  assessed  on  the  Agilent Bioanalyzer 2100 system.
The  clustering  of  the  index-coded  samples  was  performed  on  a  cBot  Cluster Generation System using TruSeq PE Cluster Kit v3-cBot-HS (Illumia) according to the manufacturer’s  instructions.  After  cluster  generation,  the  library  preparations  were sequenced  on  an  Illumina  Novaseq  platform  and  150  bp  paired-end  reads  were generated.

tag: strain

tag: treatment

value: with HN4+ addition


title: L1008B Fibroblast RNA-seq


title: Embryo 24hpf_20170512_bath study 24hpf 27-04-17 strip a tails_ _08.RCC

value: wild type


title: Embryo 24hpf_20170512_bath study 24hpf 27-04-17 strip a tails_ _09.RCC


title: L1028C Fibroblast RNA-seq

value: wild-type


title: Root tip, 249_rep3


title: L1007A Fibroblast RNA-seq


title: L1028A Fibroblast RNA-seq


title: L1028B Fibroblast RNA-seq


title: AD_HN4_rep1


title: AD_rep2

value: without HN4+ addition


title: Embryo 24hpf_20170512_bath study 24hpf 27-04-17 strip a tails_ _01.RCC


title: L1084C Fibroblast RNA-seq


title: AD_HN4_rep2


title: Embryo 18hpf_20160719_bath study 18hpf 25-05-16 strip8_ 11_11.RCC

value: decapitated embryos


title: L1084B Fibroblast RNA-seq


title: Embryo 24hpf_20170512_bath study 24hpf 27-04-17 strip a tails_ _05.RCC

value: tails


title: Embryo 18hpf_20160719_bath study 18hpf 25-05-16 strip8_ 10 _10.RCC


title: Embryo 24hpf_20170512_bath study 24hpf 27-04-17 strip a tails_ _06.RCC


title: AD_rep3


title: AD_rep1


title: Embryo 18hpf_20160719_bath study 18hpf 25-05-16 strip8_ 9_09.RCC


title: male_NL4_phag_2

city: Boston

first: Dilansu

last: Guneykaya

state: MA

address: 220 Longwood Avenue

department: Neurobiology

country: USA

institute: Harvard Medical School

data_processing:
Illumina software used for basecalling.
Transcripts were quantified by the BTL computational pipeline using Cuffquant version 2.2.1(Trapnell et al., 2012)
Raw counts were normalized using TMM normalization and then log2-transformed.
Genome_build: mmusculus_gene_ensembl
Supplementary_files_format_and_content: Matrix table with raw gene counts for every gene and every sample

organism: Mus musculus

source_name: whole brain microglia

extract_protocol:
RNA was isolated 1,000 isolated Ly6C-CD11b+Fcrls+ microglia were lysed in 5ul TCL buffer +1%beta-mercaptoethanol. Smart-Seq2 libraries were prepared and sequenced by the Broad Genomic Platform.
RNA libraries were prepared for sequencing using smartseq-2 protocol 5 from Broad genomic facility

tag: Sex

value: male

tag: group

value: male phagocytosis

value: whole brain

value: microglia


title: male_NL4_phag_3


title: male_NL4_phag_4


title: Embryo 18hpf_20160719_bath study 18hpf 25-05-16 strip8_ 12_12.RCC


title: Embryo 18hpf_20160719_bath study 18hpf 25-05-16 strip8_ 8_08.RCC


title: L1084A Fibroblast RNA-seq


title: Embryo 24hpf_20170517_bath study 24hpf 27-04-17 strip d tails_ _01.RCC


title: male_WT_phag_4

value: WT


title: male_NL4_phag_1


title: male_WT_phag_3


title: Embryo 18hpf_20160719_bath study 18hpf 25-05-16 strip8_ 6_06.RCC


title: Embryo 18hpf_20160719_bath study 18hpf 25-05-16 strip8_ 7_07.RCC


title: Embryo 18hpf_20160719_bath study 18hpf 25-05-16 strip8_ 5_05.RCC


title: male_WT_phag_2


title: Embryo 18hpf_20160719_bath study 18hpf 25-05-16 strip8_ 4_04.RCC


title: male_WT_phag_1


title: Embryo 18hpf_20160719_bath study 18hpf 25-05-16 strip8_ 3_03.RCC


title: male_NL4_2

value: male ctrl


title: Covid 108 acute phase PBMC

city: Berlin

first: Nils

last: Blüthgen

address: Chariteplatz 1

department: Institute of Pathology

country: Germany

institute: Charite Universitätsmedizin Berlin

description:
single cell RNA
cell_metadata_table.tsv.gz
91_n_148_a_108_a_325_c_PBMC_5_filtered_feature_bc_matrix.h5
91_n_148_a_108_a_325_c_PBMC_5_filtered_contig_annotations.csv
91_n_148_a_108_a_325_c_PBMC_5_donor_ids.tsv
91_n_148_a_108_a_325_c_PBMC_5_clonotypes.csv

data_processing:
The Cell Ranger Software Suite (Version 5.0.0) was used to process raw sequencing data, using the cellranger multi workflow and the GRCh38 references for gene expression and VDJ data and totalSeq antibody barcode sequences for feature barcoding data. Multiplexed samples from multiple donors were demultiplexed by detecting SNPs using CellSNP-lite (Huang and Huang, 2021).
For each sample, the number of RNA counts per cell was mean-normalized, and cells with a mean-normalized RNA count lower than 0.45 and higher than 5 were excluded from the analysis, as well as cells with a percentage of mitochondrial reads higher than 10%.
Genome_build: GRCh38
Supplementary_files_format_and_content:
CSV, clonotypes cell ranger output
CSV, TCR contig annotation cell ranger output
H5 file, count matrices as cell ranger output
TSV, count matrix with cells as columns, and genes as rows.
TSV, donor ID SNP demultiplexing output
TSV, metadata annotation of all cells (incl. clusters,VDJ)

source_name: PBMC

extract_protocol:
Human peripheral blood mononuclear cells (PBMCs) were isolated from heparinized whole blood by density gradient centrifugation over Pancoll (density: 1,077g /ml, PAN-Biotech). Subsequently the cells were counted, frozen and stored in liquid nitrogen.
On the day of the experiment the frozen PBMCs were thawed in pre-warmed thawing medium. About 2-3 x10^5 PBMCs were resuspended in staining buffer (DPBS, Gibco; 0,5% BSA, Miltenyi; 2 mM EDTA, Gibco) and hashtagged with 0,5 µg Total-Seq-C Hashtag antibodies for 30 min at 4°C. After the incubation PBMCs were washed three times. Subsequently PBMC were counted and up to four different samples were pooled equally. T-cell libraries were generated by staining with antibodies recognizing CD3, CD4, CD8 and CD38 for later flow cytometry sorting and simultaneously hashtagged as described above. Subsequently, CD3+CD4+CD38+ cells and CD3+CD8+CD38+ cells were sorted using the FACS Aria (BD Bioscience). Afterwards CD4+CD38+ and CD8+ CD38+ cells from each donor were pooled equally and then CD38+ T cells from up to four samples were also pooled in equal proportions.
The cell suspension was loaded with 40.000 - 50.000 cells per lane, in the Chromium Controller. scRNA libraries were generated using 10X 5' sequencing library kit v1.1. For additional VDJ and hashtag libraries the Chromium Single Cell V(D)J Enrichment Kit, Human T Cell (10x Genomics) and the Chromium Single Cell 5’ Feature Barcode Library Kit (10x Genomics) were used respectively
Cells from up to 4 samples were pooled, and TotalSeq C Hashtag antibodies were used to identify samples

tag: disease  state

value: CV

tag: patient id

tag: disease phase

value: acute

tag: disease severity

value: severe

value: PBMC

tag: library


title: Embryo 18hpf_20160719_bath study 18hpf 25-05-16 strip8_ 2_02.RCC

tag: age (hpf)

tag: genotype


title: Covid 108 acute phase Tcells

description:
single cell RNA
cell_metadata_table.tsv.gz
91_n_148_a_108_a_325_c_Tcells_5_filtered_feature_bc_matrix.h5
91_n_148_a_108_a_325_c_Tcells_5_filtered_contig_annotations.csv
91_n_148_a_108_a_325_c_Tcells_5_donor_ids.tsv
91_n_148_a_108_a_325_c_Tcells_5_clonotypes.csv

source_name: CD38+ T cells

value: CD38+ T cells


title: Covid 108 convalescent Tcells

description:
single cell RNA
cell_metadata_table.tsv.gz
105_n_149_a_50029_a_108_c_Tcells_5_filtered_feature_bc_matrix.h5
105_n_149_a_50029_a_108_c_Tcells_5_filtered_contig_annotations.csv
105_n_149_a_50029_a_108_c_Tcells_5_donor_ids.tsv
105_n_149_a_50029_a_108_c_Tcells_5_clonotypes.csv

value: convalescent


title: male_NL4_1

tag: tissue


title: Covid 108 convalescent PBMC

description:
single cell RNA
cell_metadata_table.tsv.gz
105_n_149_a_50029_a_108_c_PBMC_5_filtered_feature_bc_matrix.h5
105_n_149_a_50029_a_108_c_PBMC_5_filtered_contig_annotations.csv
105_n_149_a_50029_a_108_c_PBMC_5_donor_ids.tsv
105_n_149_a_50029_a_108_c_PBMC_5_clonotypes.csv


title: Embryo 18hpf_20160719_bath study 18hpf 25-05-16 strip8_ 1_01.RCC

value: wild type


title: male_WT_2


title: Covid 12 acute phase PBMC

description:
single cell RNA
cell_metadata_table.tsv.gz
37_c_21_a_12_a_136_c_PBMC_5_filtered_feature_bc_matrix.h5
37_c_21_a_12_a_136_c_PBMC_5_filtered_contig_annotations.csv
37_c_21_a_12_a_136_c_PBMC_5_donor_ids.tsv
37_c_21_a_12_a_136_c_PBMC_5_clonotypes.csv


title: Covid 136 acute phase Tcells

description:
single cell RNA
cell_metadata_table.tsv.gz
37_a_21_c_12_c_136_a_Tcells_5_filtered_feature_bc_matrix.h5
37_a_21_c_12_c_136_a_Tcells_5_filtered_contig_annotations.csv
37_a_21_c_12_c_136_a_Tcells_5_donor_ids.tsv
37_a_21_c_12_c_136_a_Tcells_5_clonotypes.csv


title: Covid 12 acute phase Tcells

description:
single cell RNA
cell_metadata_table.tsv.gz
37_c_21_a_12_a_136_c_Tcells_5_filtered_feature_bc_matrix.h5
37_c_21_a_12_a_136_c_Tcells_5_filtered_contig_annotations.csv
37_c_21_a_12_a_136_c_Tcells_5_donor_ids.tsv
37_c_21_a_12_a_136_c_Tcells_5_clonotypes.csv


title: male_WT_1


title: Embryo 60hpf_20160819_bath study 60hpf strip2 1-12_ 4_04.RCC


title: Covid 12 convalescent Tcells


title: CF3

type: genomic

city: Parkville

first: Shivanthan

last: Shanthikumar

state: VIC

address: 50 Flemington Road

country: Australia

institute: Royal Children's Hospital

description:
broncholaveolar lavage from a child with cystic fibrosis
SAMPLE 17

hyb_protocol: bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human MethylationEPIC BeadChip  using standard Illumina protocol

scan_protocol: Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting

data_processing: Bead studio software

label: Cy5 and Cy3

molecule: genomic DNA

source_name: Genomic DNA from raw bronchoalveolar lavage from a child with cystic fibrosis

label_protocol: Standard Illumina Protocol

extract_protocol: DNA was extracted from samples using the Qiagen QIAamp DNA Micro Kit according to standard instructions

value: bronchoalveolar lavage

value: total bronchoalveolar lavage

tag: disease state

value: cystic fibrosis


title: Covid 136 convalescent PBMC


title: Covid 136 convalescent Tcells


title: female_NL4_phag_4

value: female

value: female phagocytosis


title: CF2

description:
broncholaveolar lavage from a child with cystic fibrosis
SAMPLE 18


title: CF5

description:
broncholaveolar lavage from a child with cystic fibrosis
SAMPLE 19


title: Covid 2 acute phase Tcells

description:
single cell RNA
cell_metadata_table.tsv.gz
2_Tcells_5_filtered_feature_bc_matrix.h5
2_Tcells_5_filtered_contig_annotations.csv
2_Tcells_5_clonotypes.csv

value: mild


title: Covid 218 acute phase PBMC

description:
single cell RNA
cell_metadata_table.tsv.gz
70_c_325_a_50029_c_218_a_59_a_PBMC_5_filtered_feature_bc_matrix.h5
70_c_325_a_50029_c_218_a_59_a_PBMC_5_filtered_contig_annotations.csv
70_c_325_a_50029_c_218_a_59_a_PBMC_5_donor_ids.tsv
70_c_325_a_50029_c_218_a_59_a_PBMC_5_clonotypes.csv


title: Covid 21 acute phase Tcells


title: Embryo 18hpf_20160610_bath study 18hpf 25-05 strip1_ 10 _10.RCC

value: whole embryos


title: female_NL4_phag_3

value: whole brain

value: microglia


title: Embryo 18hpf_20160610_bath study 18hpf 25-05 strip1_ 8_08.RCC


title: Covid 21 acute phase PBMC


title: Covid 21 convalescent Tcells


title: Embryo 18hpf_20160610_bath study 18hpf 25-05 strip1_ 12_12.RCC


title: Embryo 18hpf_20160610_bath study 18hpf 25-05 strip1_ 9_09.RCC


title: female_NL4_phag_1


title: Covid 218 acute phase Tcells

description:
single cell RNA
cell_metadata_table.tsv.gz
70_c_325_a_50029_c_218_a_59_a_Tcells_5_filtered_feature_bc_matrix.h5
70_c_325_a_50029_c_218_a_59_a_Tcells_5_filtered_contig_annotations.csv
70_c_325_a_50029_c_218_a_59_a_Tcells_5_donor_ids.tsv
70_c_325_a_50029_c_218_a_59_a_Tcells_5_clonotypes.csv


title: Embryo 18hpf_20160610_bath study 18hpf 25-05 strip1_ 7_07.RCC


title: female_WT_phag_4

value: WT


title: M5

description:
pooled sample
alveolar macrophages purified from bronchoalveolar lavage
SAMPLE 11

source_name: Genomic DNA from alveolar macrophages

value: alveolar macrophages

value: not applicable


title: Embryo 18hpf_20160610_bath study 18hpf 25-05 strip1_ 5_05.RCC


title: Covid 22 acute phase Tcells

description:
single cell RNA
cell_metadata_table.tsv.gz
22_39_Tcells_5_filtered_feature_bc_matrix.h5
22_39_Tcells_5_filtered_contig_annotations.csv
22_39_Tcells_5_donor_ids.tsv
22_39_Tcells_5_clonotypes.csv

value: CV

value: acute

value: severe


title: A2

description:
pooled sample
alveolar epithelial cells purified from bronchoalveolar lavage
SAMPLE 14

source_name: Genomic DNA from alveolar epithelial cells

value: alveolar epithelial cells


title: Embryo 18hpf_20160610_bath study 18hpf 25-05 strip1_ 4_04.RCC

description: This sample has associated processed data in the sample table.

value: wild type


title: Covid 29 acute phase PBMC

description:
single cell RNA
cell_metadata_table.tsv.gz
29_88_PBMC_5_filtered_feature_bc_matrix.h5
29_88_PBMC_5_filtered_contig_annotations.csv
29_88_PBMC_5_donor_ids.tsv
29_88_PBMC_5_clonotypes.csv

value: PBMC


title: female_WT_phag_2


title: Covid 22 acute phase PBMC

description:
single cell RNA
cell_metadata_table.tsv.gz
22_39_PBMC_5_filtered_feature_bc_matrix.h5
22_39_PBMC_5_filtered_contig_annotations.csv
22_39_PBMC_5_donor_ids.tsv
22_39_PBMC_5_clonotypes.csv


title: Covid 29 acute phase Tcells

description:
single cell RNA
cell_metadata_table.tsv.gz
29_88_Tcells_5_filtered_feature_bc_matrix.h5
29_88_Tcells_5_filtered_contig_annotations.csv
29_88_Tcells_5_donor_ids.tsv
29_88_Tcells_5_clonotypes.csv

value: CD38+ T cells


title: Covid 22 convalescent Tcells

value: convalescent


title: Control

description:
broncholaveolar lavage from a healthy child
SAMPLE 20

source_name: Genomic DNA from raw bronchoalveolar lavage from a child

value: bronchoalveolar lavage

value: total bronchoalveolar lavage

value: normal

value: female


title: female_WT_phag_3

value: female phagocytosis

value: whole brain


title: L2

description:
pooled sample
lymphocytes purified from bronchoalveolar lavage
SAMPLE 9

source_name: Genomic DNA from lymphocytes

value: lymphocytes

value: cystic fibrosis


title: L1

description:
pooled sample
lymphocytes purified from bronchoalveolar lavage
SAMPLE 8

value: not applicable


title: AEC1

description:
pooled sample
alveolar epithelial cells purified from bronchoalveolar lavage
SAMPLE 1


title: Covid 22 convalescent PBMC

value: CV


title: G3

description:
pooled sample
granulocytes purified from bronchoalveolar lavage
SAMPLE 7

source_name: Genomic DNA from granulocytes

value: granulocytes


title: female_NL4_phag_2

value: microglia


title: L3

description:
pooled sample
lymphocytes purified from bronchoalveolar lavage
SAMPLE 13


title: G2

description:
pooled sample
granulocytes purified from bronchoalveolar lavage
SAMPLE 6


title: Embryo 18hpf_20160610_bath study 18hpf 25-05 strip1_ 3_03.RCC

value: whole embryos


title: female_WT_phag_1

value: WT


title: M1

description:
pooled sample
alveolar macrophages purified from bronchoalveolar lavage
SAMPLE 2

value: alveolar macrophages


title: female_NL4_2

value: female ctrl


title: Covid 325 acute phase PBMC

description:
single cell RNA
cell_metadata_table.tsv.gz
70_c_325_a_50029_c_218_a_59_a_PBMC_5_filtered_feature_bc_matrix.h5
70_c_325_a_50029_c_218_a_59_a_PBMC_5_filtered_contig_annotations.csv
70_c_325_a_50029_c_218_a_59_a_PBMC_5_donor_ids.tsv
70_c_325_a_50029_c_218_a_59_a_PBMC_5_clonotypes.csv

value: acute

value: mild

value: PBMC


title: Covid 29 convalescent Tcells

value: convalescent

value: CD38+ T cells


title: CF4

description:
broncholaveolar lavage from a child with cystic fibrosis
SAMPLE 15

value: bronchoalveolar lavage

value: total bronchoalveolar lavage

value: male


title: Covid 325 acute phase Tcells

description:
single cell RNA
cell_metadata_table.tsv.gz
70_c_325_a_50029_c_218_a_59_a_Tcells_5_filtered_feature_bc_matrix.h5
70_c_325_a_50029_c_218_a_59_a_Tcells_5_filtered_contig_annotations.csv
70_c_325_a_50029_c_218_a_59_a_Tcells_5_donor_ids.tsv
70_c_325_a_50029_c_218_a_59_a_Tcells_5_clonotypes.csv


title: Covid 325 convalescent PBMC

description:
single cell RNA
cell_metadata_table.tsv.gz
91_n_148_a_108_a_325_c_PBMC_5_filtered_feature_bc_matrix.h5
91_n_148_a_108_a_325_c_PBMC_5_filtered_contig_annotations.csv
91_n_148_a_108_a_325_c_PBMC_5_donor_ids.tsv
91_n_148_a_108_a_325_c_PBMC_5_clonotypes.csv


title: female_NL4_1

value: female

value: whole brain


title: Covid 325 convalescent Tcells

description:
single cell RNA
cell_metadata_table.tsv.gz
91_n_148_a_108_a_325_c_Tcells_5_filtered_feature_bc_matrix.h5
91_n_148_a_108_a_325_c_Tcells_5_filtered_contig_annotations.csv
91_n_148_a_108_a_325_c_Tcells_5_donor_ids.tsv
91_n_148_a_108_a_325_c_Tcells_5_clonotypes.csv

value: CV


title: M2

description:
pooled sample
alveolar macrophages purified from bronchoalveolar lavage
SAMPLE 3

value: cystic fibrosis

value: not applicable


title: female_WT_1

value: microglia


title: G4

description:
pooled sample
granulocytes purified from bronchoalveolar lavage
SAMPLE 12

value: granulocytes


title: M3

description:
pooled sample
alveolar macrophages purified from bronchoalveolar lavage
SAMPLE 4

value: alveolar macrophages


title: Covid 39 convalescent Tcells

description:
single cell RNA
cell_metadata_table.tsv.gz
22_39_Tcells_5_filtered_feature_bc_matrix.h5
22_39_Tcells_5_filtered_contig_annotations.csv
22_39_Tcells_5_donor_ids.tsv
22_39_Tcells_5_clonotypes.csv

value: severe


title: Embryo 21hpf_20160315_bath study 4 21hpf_4_04.RCC

description: This sample has associated processed data in the sample table.

value: wild type

value: whole embryos


title: CF1

description:
broncholaveolar lavage from a child with cystic fibrosis
SAMPLE 16