title: Mint-ChIP-seq from osteocyte (ENCLB224TEB)

description:
https://www.encodeproject.org/experiments/ENCSR638GEZ/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 Mint-ChIP-seq on osteocyte
experiment encode accession: ENCSR638GEZ
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR554CUI
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB224TEB

value: in vitro differentiated cells

value: WA09 derived osteocytes

value: healthy

value: embryonic

value: 5 day

value: SESCC

value: ENCBS572IFJ at ENCODE; https://www.encodeproject.org/ENCBS572IFJ/

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: Control ChIP-seq from middle frontal area 46 (ENCLB633YUJ)

status: Public on Nov 04 2021

type: SRA

city: Stanford

first: ENCODE

last: DCC

state: CA

address: 300 Pasteur Dr

country: USA

institute: ENCODE DCC

description:
https://www.encodeproject.org/experiments/ENCSR564VBC/
***************
biological replicate number: 1
technical replicate number: 2
description: Control ChIP-seq on middle frontal area 46 tissue female adult (86 years) with Alzheimer's disease.
experiment encode accession: ENCSR564VBC
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB633YUJ
size range: 200-600

library_source: genomic

data_processing: See GSM*_README.txt supplementary file linked below

molecule: genomic DNA

organism: Homo sapiens

source_name: Homo sapiens female adult (86 years) with Alzheimer's disease; middle frontal area 46 tissue

value: middle frontal area 46

value: tissue

tag: biosample encode accession

tag: Sex

value: female

tag: dev stage

value: adult

tag: age

value: 86 year

tag: lab

value: Bradley Bernstein, Broad

tag: source

value: Rush University

tag: link

value: ENCBS797LUE at ENCODE; https://www.encodeproject.org/ENCBS797LUE/

value: Derived from ENCODE donor ENCDO997SGX; https://www.encodeproject.org/ENCDO997SGX/


title: Histone ChIP-seq from heart right ventricle (ENCLB410IWA)

description:
https://www.encodeproject.org/experiments/ENCSR700ZDF/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 ChIP-seq on heart right ventricle tissue male adult (66 years).
experiment encode accession: ENCSR700ZDF
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR898WPF
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB410IWA
size range: 200-600

source_name: Homo sapiens male adult (66 years) heart right ventricle tissue

tag: antibody

value: heart right ventricle

value: male

tag: health state

value: ischemic (EF 29% LVEDD 5.4; RV normal size, mild dysfunction)

value: 66 year

value: Shin Lin

value: ENCBS948AHG at ENCODE; https://www.encodeproject.org/ENCBS948AHG/

value: Derived from ENCODE donor ENCDO926KEV; https://www.encodeproject.org/ENCDO926KEV/


title: TF ChIP-seq from middle frontal area 46 (ENCLB224VVI)

description:
https://www.encodeproject.org/experiments/ENCSR699BRV/
***************
biological replicate number: 1
technical replicate number: 2
description: CTCF ChIP-seq on middle frontal area 46 tissue female adult (90 or above years) with mild cognitive impairment
experiment encode accession: ENCSR699BRV
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR891ZHA
encode release date: 2021-07-23
lab: Bradley Bernstein, Broad
library encode accession: ENCLB224VVI
size range: 200-600

source_name: Homo sapiens female adult (90 or above years) with mild cognitive impairment; middle frontal area 46 tissue

value: CTCF

value: 90 or above year

value: ENCBS693PDQ at ENCODE; https://www.encodeproject.org/ENCBS693PDQ/

value: Derived from ENCODE donor ENCDO033BMB; https://www.encodeproject.org/ENCDO033BMB/


title: TF ChIP-seq from middle frontal area 46 (ENCLB909LWX)

description:
https://www.encodeproject.org/experiments/ENCSR699BRV/
***************
biological replicate number: 1
technical replicate number: 1
description: CTCF ChIP-seq on middle frontal area 46 tissue female adult (90 or above years) with mild cognitive impairment
experiment encode accession: ENCSR699BRV
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR891ZHA
encode release date: 2021-07-23
lab: Bradley Bernstein, Broad
library encode accession: ENCLB909LWX
size range: 200-600

value: middle frontal area 46

value: tissue

value: female

value: adult


title: Histone ChIP-seq from heart left ventricle (ENCLB132BPL)

description:
https://www.encodeproject.org/experiments/ENCSR561VNL/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac ChIP-seq on heart left ventricle tissue female adult (56 years).
experiment encode accession: ENCSR561VNL
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR261PLD
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB132BPL
size range: 200-600

source_name: Homo sapiens female adult (56 years) heart left ventricle tissue

value: heart left ventricle

value: PGD

value: 56 year

value: Bradley Bernstein, Broad

value: ENCBS906ICM at ENCODE; https://www.encodeproject.org/ENCBS906ICM/

value: Derived from ENCODE donor ENCDO907YUG; https://www.encodeproject.org/ENCDO907YUG/


title: Histone ChIP-seq from heart left ventricle (ENCLB540YYD)

description:
https://www.encodeproject.org/experiments/ENCSR561VNL/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on heart left ventricle tissue female adult (56 years).
experiment encode accession: ENCSR561VNL
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR261PLD
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB540YYD
size range: 200-600

value: Shin Lin


title: Histone ChIP-seq from heart left ventricle (ENCLB907YWO)

description:
https://www.encodeproject.org/experiments/ENCSR703TUW/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 ChIP-seq on heart left ventricle tissue female adult (56 years).
experiment encode accession: ENCSR703TUW
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR261PLD
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB907YWO
size range: 200-600


title: Control Mint-ChIP-seq from T-helper 2 cell (ENCLB176WWB)

description:
https://www.encodeproject.org/experiments/ENCSR635PGB/
***************
biological replicate number: 1
technical replicate number: 2
description: Control Mint-ChIP-seq on T-helper 2 cell male adult (35 years) treated with 5 ?g/mL Interferon-gamma antibody , 100 ng/mL Interleukin-4
experiment encode accession: ENCSR635PGB
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB176WWB

source_name: Homo sapiens male adult (35 years) T-helper 2 primary cell treated with 5 ug/mL Interferon-gamma antibody , 100 ng/mL Interleukin-4

value: T-helper 2 cell

value: primary cell

value: male

value: 35 year

value: Yijun Ruan, JAX

value: AllCells

tag: treatments

value: treatment_term_name:Interferon-gamma antibody; treatment_type:antibody; treatment_term_id:UniProtKB:P05112; treatment_term_name:Interleukin-4; treatment_type:protein;

value: ENCBS965HLC at ENCODE; https://www.encodeproject.org/ENCBS965HLC/

value: Derived from ENCODE donor ENCDO374BBL; https://www.encodeproject.org/ENCDO374BBL/


title: Control Mint-ChIP-seq from endodermal cell (ENCLB708XGI)

description:
https://www.encodeproject.org/experiments/ENCSR637MGY/
***************
biological replicate number: 1
technical replicate number: 1
description: Control Mint-ChIP-seq on H1 derived endodermal cell
experiment encode accession: ENCSR637MGY
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB708XGI

source_name: Homo sapiens male embryo endodermal in vitro differentiated cells originated from H1, preserved by flash-freezing

value: endodermal cell

value: in vitro differentiated cells

value: embryonic

value: not collected

value: Job Dekker, UMass

value: René Maehr

value: healthy

value: ENCBS180HZM at ENCODE; https://www.encodeproject.org/ENCBS180HZM/

value: Derived from ENCODE donor ENCDO000AAW; https://www.encodeproject.org/ENCDO000AAW/


title: Control Mint-ChIP-seq from T-helper 2 cell (ENCLB252EVP)

description:
https://www.encodeproject.org/experiments/ENCSR635PGB/
***************
biological replicate number: 1
technical replicate number: 1
description: Control Mint-ChIP-seq on T-helper 2 cell male adult (35 years) treated with 5 ?g/mL Interferon-gamma antibody , 100 ng/mL Interleukin-4
experiment encode accession: ENCSR635PGB
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB252EVP

value: T-helper 2 cell

value: primary cell

value: adult


title: Histone ChIP-seq from heart left ventricle (ENCLB584YGG)

description:
https://www.encodeproject.org/experiments/ENCSR560XLD/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 ChIP-seq on heart left ventricle tissue female adult (56 years).
experiment encode accession: ENCSR560XLD
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR261PLD
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB584YGG
size range: 200-600

value: heart left ventricle

value: tissue

value: female

value: PGD

value: 56 year

value: Bradley Bernstein, Broad

value: Shin Lin

value: ENCBS906ICM at ENCODE; https://www.encodeproject.org/ENCBS906ICM/

value: Derived from ENCODE donor ENCDO907YUG; https://www.encodeproject.org/ENCDO907YUG/


title: Histone ChIP-seq from middle frontal area 46 (ENCLB023QDB)

description:
https://www.encodeproject.org/experiments/ENCSR558GCO/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27me3 ChIP-seq on middle frontal area 46 tissue female adult (87 years)
experiment encode accession: ENCSR558GCO
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR293ZPH
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB023QDB
size range: 200-600

source_name: Homo sapiens female adult (87 years) middle frontal area 46 tissue

value: middle frontal area 46

value: 87 year

value: Rush University

value: ENCBS733LER at ENCODE; https://www.encodeproject.org/ENCBS733LER/

value: Derived from ENCODE donor ENCDO640RUC; https://www.encodeproject.org/ENCDO640RUC/


title: Control Mint-ChIP-seq from endodermal cell (ENCLB909ITJ)

description:
https://www.encodeproject.org/experiments/ENCSR637MGY/
***************
biological replicate number: 1
technical replicate number: 2
description: Control Mint-ChIP-seq on H1 derived endodermal cell
experiment encode accession: ENCSR637MGY
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB909ITJ

value: endodermal cell

value: in vitro differentiated cells

value: male

value: embryonic

value: not collected

value: Job Dekker, UMass

value: René Maehr

value: healthy

value: ENCBS180HZM at ENCODE; https://www.encodeproject.org/ENCBS180HZM/

value: Derived from ENCODE donor ENCDO000AAW; https://www.encodeproject.org/ENCDO000AAW/


title: Histone ChIP-seq from middle frontal area 46 (ENCLB615WBG)

description:
https://www.encodeproject.org/experiments/ENCSR558GCO/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 ChIP-seq on middle frontal area 46 tissue female adult (87 years)
experiment encode accession: ENCSR558GCO
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR293ZPH
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB615WBG
size range: 200-600

value: tissue

value: female

value: adult

value: Bradley Bernstein, Broad


title: Control ChIP-seq from colonic mucosa (ENCLB416PLG)

description:
https://www.encodeproject.org/experiments/ENCSR557RJE/
***************
biological replicate number: 1
technical replicate number: 1
description: Control ChIP-seq on colonic mucosa tissue female adult (41 years)
experiment encode accession: ENCSR557RJE
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2021-06-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB416PLG
size range: 200-600

source_name: Homo sapiens female adult (41 years) colonic mucosa tissue

value: colonic mucosa

value: 41 year

value: Shin Lin

value: DM:no; HTN:no; CAD:no

value: ENCBS312CUX at ENCODE; https://www.encodeproject.org/ENCBS312CUX/

value: Derived from ENCODE donor ENCDO575WHY; https://www.encodeproject.org/ENCDO575WHY/


title: Control ChIP-seq from middle frontal area 46 (ENCLB307UDX)

description:
https://www.encodeproject.org/experiments/ENCSR634QZP/
***************
biological replicate number: 1
technical replicate number: 1
description: Control ChIP-seq on middle frontal area 46 tissue female adult (90 or above years).
experiment encode accession: ENCSR634QZP
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB307UDX
size range: 200-600

source_name: Homo sapiens female adult (90 or above years) middle frontal area 46 tissue

value: middle frontal area 46

value: 90 or above year

value: Rush University

value: ENCBS868XXM at ENCODE; https://www.encodeproject.org/ENCBS868XXM/

value: Derived from ENCODE donor ENCDO101GPB; https://www.encodeproject.org/ENCDO101GPB/


title: Histone ChIP-seq from heart left ventricle (ENCLB238VDI)

description:
https://www.encodeproject.org/experiments/ENCSR560XLD/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me3 ChIP-seq on heart left ventricle tissue female adult (56 years).
experiment encode accession: ENCSR560XLD
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR261PLD
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB238VDI
size range: 200-600

value: heart left ventricle

value: PGD

value: 56 year

value: ENCBS906ICM at ENCODE; https://www.encodeproject.org/ENCBS906ICM/

value: Derived from ENCODE donor ENCDO907YUG; https://www.encodeproject.org/ENCDO907YUG/


title: Mint-ChIP-seq from activated CD8-positive, naive alpha-beta T cell (ENCLB170ONY)

description:
https://www.encodeproject.org/experiments/ENCSR630FZF/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27me3 Mint-ChIP-seq on activated CD8-positive, naive alpha-beta T cell male adult (42 years)
experiment encode accession: ENCSR630FZF
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR248FZA
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB170ONY

source_name: Homo sapiens male adult (42 years) activated CD8-positive, naive alpha-beta T primary cell

value: primary cell

value: male

value: adult

value: 42 year

value: Bradley Bernstein, Broad

value: John Stamatoyannopoulos

value: ENCBS819MUY at ENCODE; https://www.encodeproject.org/ENCBS819MUY/

value: Derived from ENCODE donor ENCDO833KUM; https://www.encodeproject.org/ENCDO833KUM/


title: Histone ChIP-seq from middle frontal area 46 (ENCLB659MTN)

description:
https://www.encodeproject.org/experiments/ENCSR554HDT/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on middle frontal area 46 tissue male adult (84 years).
experiment encode accession: ENCSR554HDT
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR535VLV
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB659MTN
size range: 200-600

source_name: Homo sapiens male adult (84 years) middle frontal area 46 tissue

value: middle frontal area 46

value: tissue

value: 84 year

value: ENCBS158KQX at ENCODE; https://www.encodeproject.org/ENCBS158KQX/

value: Derived from ENCODE donor ENCDO999WDR; https://www.encodeproject.org/ENCDO999WDR/


title: Control ChIP-seq from colonic mucosa (ENCLB462BMP)

description:
https://www.encodeproject.org/experiments/ENCSR557RJE/
***************
biological replicate number: 1
technical replicate number: 2
description: Control ChIP-seq on colonic mucosa tissue female adult (41 years)
experiment encode accession: ENCSR557RJE
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2021-06-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB462BMP
size range: 200-600

value: colonic mucosa

value: female

value: 41 year

value: Shin Lin

value: DM:no; HTN:no; CAD:no

value: ENCBS312CUX at ENCODE; https://www.encodeproject.org/ENCBS312CUX/

value: Derived from ENCODE donor ENCDO575WHY; https://www.encodeproject.org/ENCDO575WHY/


title: Histone ChIP-seq from middle frontal area 46 (ENCLB474MMA)

description:
https://www.encodeproject.org/experiments/ENCSR554HDT/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac ChIP-seq on middle frontal area 46 tissue male adult (84 years).
experiment encode accession: ENCSR554HDT
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR535VLV
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB474MMA
size range: 200-600

value: male

value: adult

value: Rush University


title: Histone ChIP-seq from heart right ventricle (ENCLB668BGI)

description:
https://www.encodeproject.org/experiments/ENCSR630DSN/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me3 ChIP-seq on heart right ventricle tissue male adult (61 years).
experiment encode accession: ENCSR630DSN
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR891YGO
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB668BGI
size range: 200-600

source_name: Homo sapiens male adult (61 years) heart right ventricle tissue

value: heart right ventricle

value: 61 year

value: Bradley Bernstein, Broad

value: nonischemic (EF 11% LVEDD 7.7; RV severe dilation, severe dysfunction)

value: ENCBS175LFH at ENCODE; https://www.encodeproject.org/ENCBS175LFH/

value: Derived from ENCODE donor ENCDO808ASZ; https://www.encodeproject.org/ENCDO808ASZ/


title: Mint-ChIP-seq from activated T-helper 2 cell (ENCLB201ZUI)

description:
https://www.encodeproject.org/experiments/ENCSR697TWR/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 Mint-ChIP-seq on activated T-helper 2 cell male adult (35 years) treated with 5 ?g/mL Interferon-gamma antibody , 100 ng/mL Interleukin-4 , anti-CD3 and anti-CD28 coated beads
experiment encode accession: ENCSR697TWR
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR193QAG
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB201ZUI

source_name: Homo sapiens male adult (35 years) activated T-helper 2 primary cell treated with 5 μg/mL Interferon-gamma antibody , 100 ng/mL Interleukin-4 , anti-CD3 and anti-CD28 coated beads

value: activated T-helper 2 cell

value: primary cell

value: 35 year

value: Yijun Ruan, JAX

value: AllCells

value: treatment_term_name:Interferon-gamma antibody; treatment_type:antibody; treatment_term_id:UniProtKB:P05112; treatment_term_name:Interleukin-4; treatment_type:protein; treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS271FSH at ENCODE; https://www.encodeproject.org/ENCBS271FSH/

value: Derived from ENCODE donor ENCDO374BBL; https://www.encodeproject.org/ENCDO374BBL/


title: Histone ChIP-seq from heart right ventricle (ENCLB617PJX)

description:
https://www.encodeproject.org/experiments/ENCSR630DSN/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 ChIP-seq on heart right ventricle tissue male adult (61 years).
experiment encode accession: ENCSR630DSN
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR891YGO
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB617PJX
size range: 200-600

value: tissue

value: male

value: Shin Lin


title: Control ChIP-seq from middle frontal area 46 (ENCLB172RFT)

description:
https://www.encodeproject.org/experiments/ENCSR629GZZ/
***************
biological replicate number: 1
technical replicate number: 2
description: Control ChIP-seq on middle frontal area 46 tissue female adult (85 years) with Alzheimer's disease.
experiment encode accession: ENCSR629GZZ
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB172RFT
size range: 200-600

source_name: Homo sapiens female adult (85 years) with Alzheimer's disease; middle frontal area 46 tissue

value: middle frontal area 46

value: female

value: adult

value: 85 year

value: Rush University

value: ENCBS368SHA at ENCODE; https://www.encodeproject.org/ENCBS368SHA/

value: Derived from ENCODE donor ENCDO080EZF; https://www.encodeproject.org/ENCDO080EZF/


title: Mint-ChIP-seq from activated T-helper 2 cell (ENCLB150DUV)

description:
https://www.encodeproject.org/experiments/ENCSR697TWR/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me3 Mint-ChIP-seq on activated T-helper 2 cell male adult (35 years) treated with 5 ?g/mL Interferon-gamma antibody , 100 ng/mL Interleukin-4 , anti-CD3 and anti-CD28 coated beads
experiment encode accession: ENCSR697TWR
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR193QAG
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB150DUV

value: activated T-helper 2 cell

value: primary cell


title: Mint-ChIP-seq from type B pancreatic cell (ENCLB121NZP)

description:
https://www.encodeproject.org/experiments/ENCSR697NWN/
***************
biological replicate number: 2
technical replicate number: 2
description: H3K36me3 Mint-ChIP-seq on type B pancreatic cell
experiment encode accession: ENCSR697NWN
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR380ZKL
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB121NZP

source_name: Homo sapiens female embryo (5 days) type B pancreatic in vitro differentiated cells originated from type B pancreatic cell

value: type B pancreatic cell

value: in vitro differentiated cells

tag: description

value: WA09 derived insulin producing beta-like cells

value: healthy

value: embryonic

value: 5 day

value: Bradley Bernstein, Broad

value: SESCC

value: ENCBS251SEQ at ENCODE; https://www.encodeproject.org/ENCBS251SEQ/

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: Mint-ChIP-seq from type B pancreatic cell (ENCLB532QKA)

description:
https://www.encodeproject.org/experiments/ENCSR697NWN/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 Mint-ChIP-seq on type B pancreatic cell
experiment encode accession: ENCSR697NWN
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR380ZKL
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB532QKA
fragmentation methods: none

value: female

value: ENCBS779FCS at ENCODE; https://www.encodeproject.org/ENCBS779FCS/


title: Mint-ChIP-seq from type B pancreatic cell (ENCLB465XXN)

description:
https://www.encodeproject.org/experiments/ENCSR697NWN/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K36me3 Mint-ChIP-seq on type B pancreatic cell
experiment encode accession: ENCSR697NWN
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR380ZKL
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB465XXN


title: Histone ChIP-seq from middle frontal area 46 (ENCLB336ZOO)

description:
https://www.encodeproject.org/experiments/ENCSR443JIO/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 ChIP-seq on middle frontal area 46 tissue female adult (86 years) with Alzheimer's disease.
experiment encode accession: ENCSR443JIO
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR564VBC
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB336ZOO
size range: 200-600

value: middle frontal area 46

value: tissue

value: adult

value: 86 year

value: Rush University

value: ENCBS797LUE at ENCODE; https://www.encodeproject.org/ENCBS797LUE/

value: Derived from ENCODE donor ENCDO997SGX; https://www.encodeproject.org/ENCDO997SGX/


title: Control Mint-ChIP-seq from osteocyte (ENCLB668VIS)

description:
https://www.encodeproject.org/experiments/ENCSR554CUI/
***************
biological replicate number: 2
technical replicate number: 1
description: Control Mint-ChIP-seq on osteocyte
experiment encode accession: ENCSR554CUI
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB668VIS

source_name: Homo sapiens female embryo (5 days) osteocyte in vitro differentiated cells originated from osteocyte

value: osteocyte

value: in vitro differentiated cells

value: WA09 derived osteocytes

value: ENCBS572IFJ at ENCODE; https://www.encodeproject.org/ENCBS572IFJ/


title: Mint-ChIP-seq from activated CD8-positive, naive alpha-beta T cell (ENCLB289JZP)

description:
https://www.encodeproject.org/experiments/ENCSR630FZF/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 Mint-ChIP-seq on activated CD8-positive, naive alpha-beta T cell male adult (42 years)
experiment encode accession: ENCSR630FZF
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR248FZA
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB289JZP

value: primary cell

value: male

value: 42 year

value: Bradley Bernstein, Broad

value: John Stamatoyannopoulos

value: ENCBS819MUY at ENCODE; https://www.encodeproject.org/ENCBS819MUY/

value: Derived from ENCODE donor ENCDO833KUM; https://www.encodeproject.org/ENCDO833KUM/


title: Histone ChIP-seq from heart right ventricle (ENCLB111YFF)

description:
https://www.encodeproject.org/experiments/ENCSR621FFD/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27me3 ChIP-seq on heart right ventricle tissue male adult (61 years).
experiment encode accession: ENCSR621FFD
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR891YGO
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB111YFF
size range: 200-600

value: heart right ventricle

value: tissue

value: 61 year

value: Shin Lin

value: nonischemic (EF 11% LVEDD 7.7; RV severe dilation, severe dysfunction)

value: ENCBS175LFH at ENCODE; https://www.encodeproject.org/ENCBS175LFH/

value: Derived from ENCODE donor ENCDO808ASZ; https://www.encodeproject.org/ENCDO808ASZ/


title: Control Mint-ChIP-seq from osteocyte (ENCLB807PZT)

description:
https://www.encodeproject.org/experiments/ENCSR554CUI/
***************
biological replicate number: 1
technical replicate number: 1
description: Control Mint-ChIP-seq on osteocyte
experiment encode accession: ENCSR554CUI
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB807PZT

value: osteocyte

value: in vitro differentiated cells

value: female

value: healthy

value: embryonic

value: 5 day

value: SESCC

value: ENCBS034WOR at ENCODE; https://www.encodeproject.org/ENCBS034WOR/

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: Control ChIP-seq from middle frontal area 46 (ENCLB611UOK)

description:
https://www.encodeproject.org/experiments/ENCSR634QZP/
***************
biological replicate number: 1
technical replicate number: 2
description: Control ChIP-seq on middle frontal area 46 tissue female adult (90 or above years).
experiment encode accession: ENCSR634QZP
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB611UOK
size range: 200-600

value: middle frontal area 46

value: adult

value: 90 or above year

value: Bradley Bernstein, Broad

value: Rush University

value: ENCBS868XXM at ENCODE; https://www.encodeproject.org/ENCBS868XXM/

value: Derived from ENCODE donor ENCDO101GPB; https://www.encodeproject.org/ENCDO101GPB/


title: Control ChIP-seq from heart left ventricle (ENCLB871LXZ)

description:
https://www.encodeproject.org/experiments/ENCSR696HNV/
***************
biological replicate number: 1
technical replicate number: 1
description: Control ChIP-seq on heart left ventricle tissue male adult (61 years)
experiment encode accession: ENCSR696HNV
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2021-06-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB871LXZ
size range: 200-600

source_name: Homo sapiens male adult (61 years) heart left ventricle tissue

value: heart left ventricle

value: tissue

value: male

value: 61 year

value: Shin Lin

value: nonischemic (EF 11% LVEDD 7.7; RV severe dilation, severe dysfunction)

value: ENCBS700NCU at ENCODE; https://www.encodeproject.org/ENCBS700NCU/

value: Derived from ENCODE donor ENCDO808ASZ; https://www.encodeproject.org/ENCDO808ASZ/


title: Histone ChIP-seq from middle frontal area 46 (ENCLB930EOM)

description:
https://www.encodeproject.org/experiments/ENCSR549ZDH/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on middle frontal area 46 tissue female adult (88 years) with Alzheimer's disease.
experiment encode accession: ENCSR549ZDH
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR534WQA
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB930EOM
size range: 200-600

source_name: Homo sapiens female adult (88 years) with Alzheimer's disease; middle frontal area 46 tissue

value: female

value: 88 year

value: ENCBS995IIS at ENCODE; https://www.encodeproject.org/ENCBS995IIS/

value: Derived from ENCODE donor ENCDO070VNS; https://www.encodeproject.org/ENCDO070VNS/


title: Mint-ChIP-seq from CD4-positive naive resting alpha-beta T cell (ENCLB817MFS)

description:
https://www.encodeproject.org/experiments/ENCSR440SZD/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 Mint-ChIP-seq on CD4-positive naive resting alpha-beta T cell male adult (35 years) treated with anti-CD3 and anti-CD28 coated beads
experiment encode accession: ENCSR440SZD
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR490HRA
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB817MFS

source_name: Homo sapiens male adult (35 years) CD4-positive naive resting alpha-beta T primary cell treated with anti-CD3 and anti-CD28 coated beads

value: primary cell

value: adult

value: 35 year

value: Yijun Ruan, JAX

value: AllCells

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS266XPE at ENCODE; https://www.encodeproject.org/ENCBS266XPE/

value: Derived from ENCODE donor ENCDO374BBL; https://www.encodeproject.org/ENCDO374BBL/


title: Histone ChIP-seq from heart right ventricle (ENCLB342DFM)

description:
https://www.encodeproject.org/experiments/ENCSR696YXK/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K36me3 ChIP-seq on heart right ventricle tissue female adult (56 years).
experiment encode accession: ENCSR696YXK
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR278ACD
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB342DFM
size range: 200-600

source_name: Homo sapiens female adult (56 years) heart right ventricle tissue

value: heart right ventricle

value: tissue

value: 56 year

value: Bradley Bernstein, Broad

value: PGD

value: ENCBS664CKV at ENCODE; https://www.encodeproject.org/ENCBS664CKV/

value: Derived from ENCODE donor ENCDO907YUG; https://www.encodeproject.org/ENCDO907YUG/


title: Histone ChIP-seq from heart left ventricle (ENCLB453OPC)

description:
https://www.encodeproject.org/experiments/ENCSR696BIF/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 ChIP-seq on heart left ventricle tissue male adult (43 years).
experiment encode accession: ENCSR696BIF
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR109IWL
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB453OPC
size range: 200-600

source_name: Homo sapiens male adult (43 years) heart left ventricle tissue

value: heart left ventricle

value: male

value: 43 year

value: Shin Lin

value: nonischemic (EF 23%, LVEDD 6.1; RV moderate dilation, normal function)

value: ENCBS552CFU at ENCODE; https://www.encodeproject.org/ENCBS552CFU/

value: Derived from ENCODE donor ENCDO967KID; https://www.encodeproject.org/ENCDO967KID/


title: Control ChIP-seq from heart left ventricle (ENCLB617QMJ)

description:
https://www.encodeproject.org/experiments/ENCSR696HNV/
***************
biological replicate number: 1
technical replicate number: 2
description: Control ChIP-seq on heart left ventricle tissue male adult (61 years)
experiment encode accession: ENCSR696HNV
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2021-06-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB617QMJ
size range: 200-600

value: adult

value: 61 year

value: nonischemic (EF 11% LVEDD 7.7; RV severe dilation, severe dysfunction)

value: ENCBS700NCU at ENCODE; https://www.encodeproject.org/ENCBS700NCU/

value: Derived from ENCODE donor ENCDO808ASZ; https://www.encodeproject.org/ENCDO808ASZ/


title: Histone ChIP-seq from heart left ventricle (ENCLB541DIM)

description:
https://www.encodeproject.org/experiments/ENCSR696BIF/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K36me3 ChIP-seq on heart left ventricle tissue male adult (43 years).
experiment encode accession: ENCSR696BIF
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR109IWL
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB541DIM
size range: 200-600

value: tissue


title: Histone ChIP-seq from heart right ventricle (ENCLB626GYJ)

description:
https://www.encodeproject.org/experiments/ENCSR696YXK/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 ChIP-seq on heart right ventricle tissue female adult (56 years).
experiment encode accession: ENCSR696YXK
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR278ACD
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB626GYJ
size range: 200-600

value: heart right ventricle

value: female

value: 56 year

value: Bradley Bernstein, Broad


title: Mint-ChIP-seq from CD4-positive naive resting alpha-beta T cell (ENCLB303TJH)

description:
https://www.encodeproject.org/experiments/ENCSR440SZD/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me1 Mint-ChIP-seq on CD4-positive naive resting alpha-beta T cell male adult (35 years) treated with anti-CD3 and anti-CD28 coated beads
experiment encode accession: ENCSR440SZD
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR490HRA
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB303TJH

value: primary cell

value: 35 year

value: Yijun Ruan, JAX

value: AllCells

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS266XPE at ENCODE; https://www.encodeproject.org/ENCBS266XPE/

value: Derived from ENCODE donor ENCDO374BBL; https://www.encodeproject.org/ENCDO374BBL/


title: Control Mint-ChIP-seq from WTC11 (ENCLB333HCS)

description:
https://www.encodeproject.org/experiments/ENCSR686JHP/
***************
biological replicate number: 2
technical replicate number: 2
description: Control Mint-ChIP-seq on WTC11
experiment encode accession: ENCSR686JHP
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2021-09-27
lab: Bradley Bernstein, Broad
library encode accession: ENCLB333HCS

source_name: Homo sapiens WTC11 cell line

tag: line

value: cell line

value: male

value: adult

value: 30 year

value: Yin Shen

tag: passage number

value: ENCBS532TBS at ENCODE; https://www.encodeproject.org/ENCBS532TBS/

value: Derived from ENCODE donor ENCDO882UJI; https://www.encodeproject.org/ENCDO882UJI/


title: Mint-ChIP-seq from WTC11 (ENCLB281XNG)

description:
https://www.encodeproject.org/experiments/ENCSR549BTS/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me3 Mint-ChIP-seq on WTC11
experiment encode accession: ENCSR549BTS
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR686JHP
encode release date: 2021-09-27
lab: Bradley Bernstein, Broad
library encode accession: ENCLB281XNG

value: ENCBS869UGY at ENCODE; https://www.encodeproject.org/ENCBS869UGY/


title: Mint-ChIP-seq from WTC11 (ENCLB022CTL)

description:
https://www.encodeproject.org/experiments/ENCSR549BTS/
***************
biological replicate number: 2
technical replicate number: 2
description: H3K4me3 Mint-ChIP-seq on WTC11
experiment encode accession: ENCSR549BTS
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR686JHP
encode release date: 2021-09-27
lab: Bradley Bernstein, Broad
library encode accession: ENCLB022CTL


title: Control Mint-ChIP-seq from WTC11 (ENCLB218KNO)

description:
https://www.encodeproject.org/experiments/ENCSR686JHP/
***************
biological replicate number: 2
technical replicate number: 1
description: Control Mint-ChIP-seq on WTC11
experiment encode accession: ENCSR686JHP
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2021-09-27
lab: Bradley Bernstein, Broad
library encode accession: ENCLB218KNO


title: Control Mint-ChIP-seq from WTC11 (ENCLB827FXC)

description:
https://www.encodeproject.org/experiments/ENCSR686JHP/
***************
biological replicate number: 1
technical replicate number: 2
description: Control Mint-ChIP-seq on WTC11
experiment encode accession: ENCSR686JHP
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2021-09-27
lab: Bradley Bernstein, Broad
library encode accession: ENCLB827FXC


title: Mint-ChIP-seq from WTC11 (ENCLB623FRV)

description:
https://www.encodeproject.org/experiments/ENCSR549BTS/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 Mint-ChIP-seq on WTC11
experiment encode accession: ENCSR549BTS
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR686JHP
encode release date: 2021-09-27
lab: Bradley Bernstein, Broad
library encode accession: ENCLB623FRV


title: Control Mint-ChIP-seq from WTC11 (ENCLB691FVT)

description:
https://www.encodeproject.org/experiments/ENCSR686JHP/
***************
biological replicate number: 1
technical replicate number: 1
description: Control Mint-ChIP-seq on WTC11
experiment encode accession: ENCSR686JHP
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2021-09-27
lab: Bradley Bernstein, Broad
library encode accession: ENCLB691FVT


title: Histone ChIP-seq from middle frontal area 46 (ENCLB235HTX)

description:
https://www.encodeproject.org/experiments/ENCSR549ZDH/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac ChIP-seq on middle frontal area 46 tissue female adult (88 years) with Alzheimer's disease.
experiment encode accession: ENCSR549ZDH
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR534WQA
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB235HTX
size range: 200-600

value: middle frontal area 46

value: tissue

value: female

value: 88 year

value: Rush University

value: ENCBS995IIS at ENCODE; https://www.encodeproject.org/ENCBS995IIS/

value: Derived from ENCODE donor ENCDO070VNS; https://www.encodeproject.org/ENCDO070VNS/


title: Mint-ChIP-seq from WTC11 (ENCLB858ASI)

description:
https://www.encodeproject.org/experiments/ENCSR549BTS/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me3 Mint-ChIP-seq on WTC11
experiment encode accession: ENCSR549BTS
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR686JHP
encode release date: 2021-09-27
lab: Bradley Bernstein, Broad
library encode accession: ENCLB858ASI

value: Bradley Bernstein, Broad


title: Histone ChIP-seq from heart right ventricle (ENCLB131GGK)

description:
https://www.encodeproject.org/experiments/ENCSR621FFD/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 ChIP-seq on heart right ventricle tissue male adult (61 years).
experiment encode accession: ENCSR621FFD
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR891YGO
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB131GGK
size range: 200-600

value: heart right ventricle

value: 61 year

value: Shin Lin

value: nonischemic (EF 11% LVEDD 7.7; RV severe dilation, severe dysfunction)

value: ENCBS175LFH at ENCODE; https://www.encodeproject.org/ENCBS175LFH/

value: Derived from ENCODE donor ENCDO808ASZ; https://www.encodeproject.org/ENCDO808ASZ/


title: Mint-ChIP-seq from type B pancreatic cell (ENCLB623WGB)

description:
https://www.encodeproject.org/experiments/ENCSR697NWN/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K36me3 Mint-ChIP-seq on type B pancreatic cell
experiment encode accession: ENCSR697NWN
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR380ZKL
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB623WGB
fragmentation methods: none

value: type B pancreatic cell

value: in vitro differentiated cells

value: WA09 derived insulin producing beta-like cells

value: healthy

value: embryonic

value: 5 day

value: SESCC

value: ENCBS779FCS at ENCODE; https://www.encodeproject.org/ENCBS779FCS/

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: Control Mint-ChIP-seq from osteocyte (ENCLB386URC)

description:
https://www.encodeproject.org/experiments/ENCSR554CUI/
***************
biological replicate number: 2
technical replicate number: 2
description: Control Mint-ChIP-seq on osteocyte
experiment encode accession: ENCSR554CUI
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB386URC

value: osteocyte

value: WA09 derived osteocytes

value: female

value: ENCBS572IFJ at ENCODE; https://www.encodeproject.org/ENCBS572IFJ/


title: Histone ChIP-seq from middle frontal area 46 (ENCLB454WYK)

description:
https://www.encodeproject.org/experiments/ENCSR438KQU/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on middle frontal area 46 tissue female adult (83 years)
experiment encode accession: ENCSR438KQU
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR845BPQ
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB454WYK
size range: 200-600

source_name: Homo sapiens female adult (83 years) middle frontal area 46 tissue

value: middle frontal area 46

value: tissue

value: adult

value: 83 year

value: Bradley Bernstein, Broad

value: Rush University

value: ENCBS589LVU at ENCODE; https://www.encodeproject.org/ENCBS589LVU/

value: Derived from ENCODE donor ENCDO448ZXP; https://www.encodeproject.org/ENCDO448ZXP/


title: TF ChIP-seq from middle frontal area 46 (ENCLB054ZDQ)

description:
https://www.encodeproject.org/experiments/ENCSR610UDC/
***************
biological replicate number: 1
technical replicate number: 2
description: CTCF ChIP-seq on middle frontal area 46 tissue female adult (87 years)
experiment encode accession: ENCSR610UDC
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR293ZPH
encode release date: 2021-07-23
lab: Bradley Bernstein, Broad
library encode accession: ENCLB054ZDQ
size range: 200-600

source_name: Homo sapiens female adult (87 years) middle frontal area 46 tissue

value: CTCF

value: 87 year

value: ENCBS733LER at ENCODE; https://www.encodeproject.org/ENCBS733LER/

value: Derived from ENCODE donor ENCDO640RUC; https://www.encodeproject.org/ENCDO640RUC/


title: TF ChIP-seq from middle frontal area 46 (ENCLB374FPQ)

description:
https://www.encodeproject.org/experiments/ENCSR610UDC/
***************
biological replicate number: 1
technical replicate number: 1
description: CTCF ChIP-seq on middle frontal area 46 tissue female adult (87 years)
experiment encode accession: ENCSR610UDC
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR293ZPH
encode release date: 2021-07-23
lab: Bradley Bernstein, Broad
library encode accession: ENCLB374FPQ
size range: 200-600


title: Control Mint-ChIP-seq from osteocyte (ENCLB136BUP)

description:
https://www.encodeproject.org/experiments/ENCSR554CUI/
***************
biological replicate number: 1
technical replicate number: 2
description: Control Mint-ChIP-seq on osteocyte
experiment encode accession: ENCSR554CUI
assay title: Control Mint-ChIP-seq
assembly: GRCh38
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB136BUP

value: in vitro differentiated cells

value: healthy

value: embryonic

value: 5 day

value: SESCC

value: ENCBS034WOR at ENCODE; https://www.encodeproject.org/ENCBS034WOR/

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: Mint-ChIP-seq from chondrocyte (ENCLB984ZLN)

description:
https://www.encodeproject.org/experiments/ENCSR436PLB/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 Mint-ChIP-seq on chondrocyte
experiment encode accession: ENCSR436PLB
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR466ZEA
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB984ZLN
fragmentation methods: none

source_name: Homo sapiens female embryo (5 days) chondrocyte in vitro differentiated cells originated from chondrocyte

value: chondrocyte

value: WA09 derived chondrocytes

value: female

value: ENCBS434TAN at ENCODE; https://www.encodeproject.org/ENCBS434TAN/


title: Control ChIP-seq from middle frontal area 46 (ENCLB119WVR)

description:
https://www.encodeproject.org/experiments/ENCSR629GZZ/
***************
biological replicate number: 1
technical replicate number: 1
description: Control ChIP-seq on middle frontal area 46 tissue female adult (85 years) with Alzheimer's disease.
experiment encode accession: ENCSR629GZZ
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB119WVR
size range: 200-600

value: middle frontal area 46

value: tissue

value: adult

value: 85 year

value: Bradley Bernstein, Broad

value: Rush University

value: ENCBS368SHA at ENCODE; https://www.encodeproject.org/ENCBS368SHA/

value: Derived from ENCODE donor ENCDO080EZF; https://www.encodeproject.org/ENCDO080EZF/


title: Mint-ChIP-seq from chondrocyte (ENCLB030XKJ)

description:
https://www.encodeproject.org/experiments/ENCSR436PLB/
***************
biological replicate number: 2
technical replicate number: 2
description: H3K27me3 Mint-ChIP-seq on chondrocyte
experiment encode accession: ENCSR436PLB
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR466ZEA
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB030XKJ

value: in vitro differentiated cells

value: healthy

value: embryonic

value: ENCBS497BNU at ENCODE; https://www.encodeproject.org/ENCBS497BNU/


title: Mint-ChIP-seq from chondrocyte (ENCLB752RNP)

description:
https://www.encodeproject.org/experiments/ENCSR436PLB/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K27me3 Mint-ChIP-seq on chondrocyte
experiment encode accession: ENCSR436PLB
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR466ZEA
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB752RNP

value: 5 day

value: SESCC

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: Mint-ChIP-seq from chondrocyte (ENCLB081PXB)

description:
https://www.encodeproject.org/experiments/ENCSR436PLB/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27me3 Mint-ChIP-seq on chondrocyte
experiment encode accession: ENCSR436PLB
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR466ZEA
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB081PXB
fragmentation methods: none

value: chondrocyte

value: WA09 derived chondrocytes

value: female


title: Histone ChIP-seq from middle frontal area 46 (ENCLB736XEP)

description:
https://www.encodeproject.org/experiments/ENCSR545ZQT/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me3 ChIP-seq on middle frontal area 46 tissue female adult (85 years) with Alzheimer's disease.
experiment encode accession: ENCSR545ZQT
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR629GZZ
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB736XEP
size range: 200-600

value: middle frontal area 46

value: tissue


title: Mint-ChIP-seq from activated T-helper 2 cell (ENCLB201HCB)

description:
https://www.encodeproject.org/experiments/ENCSR545YER/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 Mint-ChIP-seq on activated T-helper 2 cell male adult (35 years) treated with 5 ?g/mL Interferon-gamma antibody , 100 ng/mL Interleukin-4 , anti-CD3 and anti-CD28 coated beads
experiment encode accession: ENCSR545YER
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR193QAG
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB201HCB

value: activated T-helper 2 cell

value: primary cell

value: male

value: adult

value: 35 year

value: Yijun Ruan, JAX

value: AllCells

value: treatment_term_name:Interferon-gamma antibody; treatment_type:antibody; treatment_term_id:UniProtKB:P05112; treatment_term_name:Interleukin-4; treatment_type:protein; treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS271FSH at ENCODE; https://www.encodeproject.org/ENCBS271FSH/

value: Derived from ENCODE donor ENCDO374BBL; https://www.encodeproject.org/ENCDO374BBL/


title: Mint-ChIP-seq from CD8-positive naive resting alpha-beta T cell (ENCLB884IGG)

description:
https://www.encodeproject.org/experiments/ENCSR544QVA/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 Mint-ChIP-seq on CD8-positive naive resting alpha-beta T cell..
experiment encode accession: ENCSR544QVA
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR810LRH
encode release date: 2021-09-27
lab: Bradley Bernstein, Broad
library encode accession: ENCLB884IGG

source_name: Homo sapiens CD8-positive naive resting alpha-beta T primary cell

value: not collected

value: unknown

value: Bradley Bernstein, Broad

value: John Stamatoyannopoulos

value: ENCBS749OUL at ENCODE; https://www.encodeproject.org/ENCBS749OUL/

value: Derived from ENCODE donor ENCDO930DIF; https://www.encodeproject.org/ENCDO930DIF/


title: Mint-ChIP-seq from CD8-positive naive resting alpha-beta T cell (ENCLB154OOH)

description:
https://www.encodeproject.org/experiments/ENCSR544QVA/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27me3 Mint-ChIP-seq on CD8-positive naive resting alpha-beta T cell..
experiment encode accession: ENCSR544QVA
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR810LRH
encode release date: 2021-09-27
lab: Bradley Bernstein, Broad
library encode accession: ENCLB154OOH


title: Histone ChIP-seq from middle frontal area 46 (ENCLB759YGG)

description:
https://www.encodeproject.org/experiments/ENCSR545ZQT/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 ChIP-seq on middle frontal area 46 tissue female adult (85 years) with Alzheimer's disease.
experiment encode accession: ENCSR545ZQT
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR629GZZ
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB759YGG
size range: 200-600

value: middle frontal area 46

value: tissue

value: female

value: 85 year

value: Rush University

value: ENCBS368SHA at ENCODE; https://www.encodeproject.org/ENCBS368SHA/

value: Derived from ENCODE donor ENCDO080EZF; https://www.encodeproject.org/ENCDO080EZF/


title: Mint-ChIP-seq from chondrocyte (ENCLB740VSE)

description:
https://www.encodeproject.org/experiments/ENCSR434WEY/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me3 Mint-ChIP-seq on chondrocyte
experiment encode accession: ENCSR434WEY
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR466ZEA
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB740VSE

value: chondrocyte

value: in vitro differentiated cells

value: WA09 derived chondrocytes

value: healthy

value: embryonic

value: 5 day

value: SESCC

value: ENCBS497BNU at ENCODE; https://www.encodeproject.org/ENCBS497BNU/

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: Histone ChIP-seq from middle frontal area 46 (ENCLB764LQW)

description:
https://www.encodeproject.org/experiments/ENCSR681ELN/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on middle frontal area 46 tissue female adult (90 or above years) with mild cognitive impairment
experiment encode accession: ENCSR681ELN
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR295FXG
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB764LQW
size range: 200-600

source_name: Homo sapiens female adult (90 or above years) with mild cognitive impairment; middle frontal area 46 tissue

value: adult

value: 90 or above year

value: Bradley Bernstein, Broad

value: ENCBS034DIU at ENCODE; https://www.encodeproject.org/ENCBS034DIU/

value: Derived from ENCODE donor ENCDO915WZE; https://www.encodeproject.org/ENCDO915WZE/


title: Histone ChIP-seq from middle frontal area 46 (ENCLB265FRF)

description:
https://www.encodeproject.org/experiments/ENCSR681ELN/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac ChIP-seq on middle frontal area 46 tissue female adult (90 or above years) with mild cognitive impairment
experiment encode accession: ENCSR681ELN
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR295FXG
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB265FRF
size range: 200-600

value: middle frontal area 46

value: tissue

value: female

value: Rush University


title: TF ChIP-seq from middle frontal area 46 (ENCLB784SIJ)

description:
https://www.encodeproject.org/experiments/ENCSR680WMF/
***************
biological replicate number: 1
technical replicate number: 1
description: CTCF ChIP-seq on dorsolateral prefrontal cortex tissue female adult (90 or above years) originated from dorsolateral prefrontal cortex
experiment encode accession: ENCSR680WMF
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR638CSE
encode release date: 2021-07-23
lab: Bradley Bernstein, Broad
library encode accession: ENCLB784SIJ
size range: 200-600

source_name: Homo sapiens female adult (90 or above years) middle frontal area 46 tissue with mild cognitive impairment

value: CTCF

value: ENCBS033DPJ at ENCODE; https://www.encodeproject.org/ENCBS033DPJ/

value: Derived from ENCODE donor ENCDO153NUY; https://www.encodeproject.org/ENCDO153NUY/


title: Mint-ChIP-seq from activated T-helper 1 cell (ENCLB930NNE)

description:
https://www.encodeproject.org/experiments/ENCSR433EWI/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K9me3 Mint-ChIP-seq on activated T-helper 1 cell male adult (35 years) treated with 1 ?g/mL Interleukin-4 antibody , 30 ng/mL Interleukin-12 subunit alpha , 30 ng/mL Interleukin-12 subunit beta , anti-CD3 and anti-CD28 coated beads
experiment encode accession: ENCSR433EWI
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR188HBL
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB930NNE

source_name: Homo sapiens male adult (35 years) activated T-helper 1 primary cell treated with 1 μg/mL Interleukin-4 antibody , 30 ng/mL Interleukin-12 subunit alpha , 30 ng/mL Interleukin-12 subunit beta , anti-CD3 and anti-CD28 coated beads

value: activated T-helper 1 cell

value: primary cell

value: male

value: 35 year

value: Yijun Ruan, JAX

value: AllCells

value: treatment_term_name:Interleukin-4 antibody; treatment_type:antibody; treatment_term_id:UniProtKB:P29459; treatment_term_name:Interleukin-12 subunit alpha; treatment_type:protein; treatment_term_id:UniProtKB:P29460; treatment_term_name:Interleukin-12 subunit beta; treatment_type:protein; treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS279ECG at ENCODE; https://www.encodeproject.org/ENCBS279ECG/

value: Derived from ENCODE donor ENCDO374BBL; https://www.encodeproject.org/ENCDO374BBL/


title: Mint-ChIP-seq from activated T-helper 1 cell (ENCLB556WKU)

description:
https://www.encodeproject.org/experiments/ENCSR433EWI/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9me3 Mint-ChIP-seq on activated T-helper 1 cell male adult (35 years) treated with 1 ?g/mL Interleukin-4 antibody , 30 ng/mL Interleukin-12 subunit alpha , 30 ng/mL Interleukin-12 subunit beta , anti-CD3 and anti-CD28 coated beads
experiment encode accession: ENCSR433EWI
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR188HBL
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB556WKU

value: adult


title: Mint-ChIP-seq from activated T-helper 2 cell (ENCLB239ZTB)

description:
https://www.encodeproject.org/experiments/ENCSR545YER/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me1 Mint-ChIP-seq on activated T-helper 2 cell male adult (35 years) treated with 5 ?g/mL Interferon-gamma antibody , 100 ng/mL Interleukin-4 , anti-CD3 and anti-CD28 coated beads
experiment encode accession: ENCSR545YER
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR193QAG
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB239ZTB

source_name: Homo sapiens male adult (35 years) activated T-helper 2 primary cell treated with 5 μg/mL Interferon-gamma antibody , 100 ng/mL Interleukin-4 , anti-CD3 and anti-CD28 coated beads

value: activated T-helper 2 cell

value: treatment_term_name:Interferon-gamma antibody; treatment_type:antibody; treatment_term_id:UniProtKB:P05112; treatment_term_name:Interleukin-4; treatment_type:protein; treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS271FSH at ENCODE; https://www.encodeproject.org/ENCBS271FSH/


title: Histone ChIP-seq from spleen (ENCLB953HCN)

description:
https://www.encodeproject.org/experiments/ENCSR436JNB/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on spleen tissue female adult (61 years)
experiment encode accession: ENCSR436JNB
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR119AVG
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB953HCN
size range: 200-600

source_name: Homo sapiens female adult (61 years) spleen tissue

value: spleen

value: tissue

value: female

value: 61 year

value: Bradley Bernstein, Broad

value: Shin Lin

value: DM:no; HTN:no; CAD:no; lungs with moderate emphysema

value: ENCBS193VFU at ENCODE; https://www.encodeproject.org/ENCBS193VFU/

value: Derived from ENCODE donor ENCDO186XRB; https://www.encodeproject.org/ENCDO186XRB/


title: TF ChIP-seq from middle frontal area 46 (ENCLB446KLT)

description:
https://www.encodeproject.org/experiments/ENCSR680WMF/
***************
biological replicate number: 1
technical replicate number: 2
description: CTCF ChIP-seq on dorsolateral prefrontal cortex tissue female adult (90 or above years) originated from dorsolateral prefrontal cortex
experiment encode accession: ENCSR680WMF
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR638CSE
encode release date: 2021-07-23
lab: Bradley Bernstein, Broad
library encode accession: ENCLB446KLT
size range: 200-600

value: CTCF

value: middle frontal area 46

value: 90 or above year

value: Rush University

value: ENCBS033DPJ at ENCODE; https://www.encodeproject.org/ENCBS033DPJ/

value: Derived from ENCODE donor ENCDO153NUY; https://www.encodeproject.org/ENCDO153NUY/


title: Mint-ChIP-seq from osteocyte (ENCLB485VDO)

description:
https://www.encodeproject.org/experiments/ENCSR680JEL/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 Mint-ChIP-seq on osteocyte
experiment encode accession: ENCSR680JEL
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR554CUI
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB485VDO

value: osteocyte

value: in vitro differentiated cells

value: WA09 derived osteocytes

value: healthy

value: embryonic

value: 5 day

value: SESCC

value: ENCBS572IFJ at ENCODE; https://www.encodeproject.org/ENCBS572IFJ/

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: Mint-ChIP-seq from chondrocyte (ENCLB614LNX)

description:
https://www.encodeproject.org/experiments/ENCSR434WEY/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 Mint-ChIP-seq on chondrocyte
experiment encode accession: ENCSR434WEY
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR466ZEA
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB614LNX

value: chondrocyte

value: WA09 derived chondrocytes

value: female

value: Bradley Bernstein, Broad

value: ENCBS497BNU at ENCODE; https://www.encodeproject.org/ENCBS497BNU/


title: Mint-ChIP-seq from osteocyte (ENCLB075OJT)

description:
https://www.encodeproject.org/experiments/ENCSR680JEL/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K36me3 Mint-ChIP-seq on osteocyte
experiment encode accession: ENCSR680JEL
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR554CUI
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB075OJT


title: Histone ChIP-seq from middle frontal area 46 (ENCLB875ILG)

description:
https://www.encodeproject.org/experiments/ENCSR438KQU/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac ChIP-seq on middle frontal area 46 tissue female adult (83 years)
experiment encode accession: ENCSR438KQU
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR845BPQ
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB875ILG
size range: 200-600

value: middle frontal area 46

value: tissue

value: adult

value: 83 year

value: Rush University

value: ENCBS589LVU at ENCODE; https://www.encodeproject.org/ENCBS589LVU/

value: Derived from ENCODE donor ENCDO448ZXP; https://www.encodeproject.org/ENCDO448ZXP/


title: Mint-ChIP-seq from mesothelial cell of epicardium (ENCLB377TNP)

description:
https://www.encodeproject.org/experiments/ENCSR432LMR/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac Mint-ChIP-seq on mesothelial cell of epicardium
experiment encode accession: ENCSR432LMR
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR268SLH
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB377TNP

source_name: Homo sapiens female embryo (5 days) mesothelial of epicardium in vitro differentiated cells originated from mesothelial cell of epicardium

value: mesothelial cell of epicardium

value: in vitro differentiated cells

value: WA09 derived epicardium (mesothelium)

value: healthy

value: embryonic

value: ENCBS924VAR at ENCODE; https://www.encodeproject.org/ENCBS924VAR/


title: Mint-ChIP-seq from mesothelial cell of epicardium (ENCLB666WWR)

description:
https://www.encodeproject.org/experiments/ENCSR432LMR/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K27ac Mint-ChIP-seq on mesothelial cell of epicardium
experiment encode accession: ENCSR432LMR
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR268SLH
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB666WWR

source_name: Homo sapiens female embryo (5 days) mesothelial of epicardium in vitro differentiated cells

value: 5 day

value: SESCC

value: ENCBS048EDA at ENCODE; https://www.encodeproject.org/ENCBS048EDA/

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: Mint-ChIP-seq from mesothelial cell of epicardium (ENCLB202VHV)

description:
https://www.encodeproject.org/experiments/ENCSR432LMR/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac Mint-ChIP-seq on mesothelial cell of epicardium
experiment encode accession: ENCSR432LMR
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR268SLH
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB202VHV

value: female

value: Bradley Bernstein, Broad


title: Mint-ChIP-seq from CD8-positive naive resting alpha-beta T cell (ENCLB049ZRG)

description:
https://www.encodeproject.org/experiments/ENCSR540MGS/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac Mint-ChIP-seq on CD8-positive naive resting alpha-beta T cell male adult (42 years)
experiment encode accession: ENCSR540MGS
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR070IHF
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB049ZRG

source_name: Homo sapiens male adult (42 years) CD8-positive naive resting alpha-beta T primary cell

value: primary cell

value: male

value: adult

value: 42 year

value: John Stamatoyannopoulos

value: ENCBS859TOE at ENCODE; https://www.encodeproject.org/ENCBS859TOE/

value: Derived from ENCODE donor ENCDO833KUM; https://www.encodeproject.org/ENCDO833KUM/


title: Histone ChIP-seq from spleen (ENCLB593HLI)

description:
https://www.encodeproject.org/experiments/ENCSR436JNB/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac ChIP-seq on spleen tissue female adult (61 years)
experiment encode accession: ENCSR436JNB
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR119AVG
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB593HLI
size range: 200-600

value: spleen

value: tissue

value: 61 year

value: Shin Lin

value: DM:no; HTN:no; CAD:no; lungs with moderate emphysema

value: ENCBS193VFU at ENCODE; https://www.encodeproject.org/ENCBS193VFU/

value: Derived from ENCODE donor ENCDO186XRB; https://www.encodeproject.org/ENCDO186XRB/


title: Mint-ChIP-seq from CD8-positive naive resting alpha-beta T cell (ENCLB390DZT)

description:
https://www.encodeproject.org/experiments/ENCSR540MGS/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac Mint-ChIP-seq on CD8-positive naive resting alpha-beta T cell male adult (42 years)
experiment encode accession: ENCSR540MGS
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR070IHF
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB390DZT


title: Mint-ChIP-seq from mesothelial cell of epicardium (ENCLB288TGQ)

description:
https://www.encodeproject.org/experiments/ENCSR432LMR/
***************
biological replicate number: 2
technical replicate number: 2
description: H3K27ac Mint-ChIP-seq on mesothelial cell of epicardium
experiment encode accession: ENCSR432LMR
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR268SLH
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB288TGQ

value: mesothelial cell of epicardium

value: in vitro differentiated cells

value: WA09 derived epicardium (mesothelium)

value: embryonic

value: 5 day

value: SESCC

value: healthy

value: ENCBS048EDA at ENCODE; https://www.encodeproject.org/ENCBS048EDA/

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: Mint-ChIP-seq from progenitor cell of endocrine pancreas (ENCLB710LIG)

description:
https://www.encodeproject.org/experiments/ENCSR673CVD/
***************
biological replicate number: 2
technical replicate number: 2
description: H3K9me3 Mint-ChIP-seq on progenitor cell of endocrine pancreas
experiment encode accession: ENCSR673CVD
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR546XZC
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB710LIG

source_name: Homo sapiens female embryo (5 days) progenitor of endocrine pancreas in vitro differentiated cells originated from progenitor cell of endocrine pancreas

value: progenitor cell of endocrine pancreas

value: WA09 derived pancreatic progenitor cells

value: female

value: Bradley Bernstein, Broad

value: ENCBS825BIV at ENCODE; https://www.encodeproject.org/ENCBS825BIV/


title: Mint-ChIP-seq from CD4-positive, CD25-positive, alpha-beta regulatory T cell (ENCLB001YCL)

description:
https://www.encodeproject.org/experiments/ENCSR603LTN/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 Mint-ChIP-seq on CD4-positive, CD25-positive, alpha-beta regulatory T cell with multiple sclerosis..
experiment encode accession: ENCSR603LTN
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR918BGN
encode release date: 2021-09-27
lab: Bradley Bernstein, Broad
library encode accession: ENCLB001YCL

source_name: Homo sapiens with multiple sclerosis; CD4-positive, CD25-positive, alpha-beta regulatory T primary cell, preserved by cryopreservation

value: primary cell

value: Treg CD3+ CD4+ CD8- CD25+ CD127-

value: not collected

value: unknown

value: David Hafler

value: multiple sclerosis

value: ENCBS595ZYR at ENCODE; https://www.encodeproject.org/ENCBS595ZYR/

value: Derived from ENCODE donor ENCDO187BUH; https://www.encodeproject.org/ENCDO187BUH/


title: Mint-ChIP-seq from progenitor cell of endocrine pancreas (ENCLB829QHJ)

description:
https://www.encodeproject.org/experiments/ENCSR673CVD/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K9me3 Mint-ChIP-seq on progenitor cell of endocrine pancreas
experiment encode accession: ENCSR673CVD
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR546XZC
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB829QHJ

source_name: Homo sapiens female embryo (5 days) progenitor of endocrine pancreas in vitro differentiated cells

value: in vitro differentiated cells

value: embryonic

value: 5 day

value: SESCC

value: ENCBS832MSN at ENCODE; https://www.encodeproject.org/ENCBS832MSN/


title: Mint-ChIP-seq from progenitor cell of endocrine pancreas (ENCLB206AVR)

description:
https://www.encodeproject.org/experiments/ENCSR673CVD/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9me3 Mint-ChIP-seq on progenitor cell of endocrine pancreas
experiment encode accession: ENCSR673CVD
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR546XZC
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB206AVR

value: progenitor cell of endocrine pancreas

value: WA09 derived pancreatic progenitor cells

value: healthy

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: Mint-ChIP-seq from progenitor cell of endocrine pancreas (ENCLB846POK)

description:
https://www.encodeproject.org/experiments/ENCSR673CVD/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9me3 Mint-ChIP-seq on progenitor cell of endocrine pancreas
experiment encode accession: ENCSR673CVD
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR546XZC
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB846POK

value: female

value: Bradley Bernstein, Broad

value: ENCBS825BIV at ENCODE; https://www.encodeproject.org/ENCBS825BIV/


title: Mint-ChIP-seq from CD4-positive, CD25-positive, alpha-beta regulatory T cell (ENCLB873ROG)

description:
https://www.encodeproject.org/experiments/ENCSR677OEF/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9me3 Mint-ChIP-seq on CD4-positive, CD25-positive, alpha-beta regulatory T cell with multiple sclerosis..
experiment encode accession: ENCSR677OEF
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR918BGN
encode release date: 2021-09-27
lab: Bradley Bernstein, Broad
library encode accession: ENCLB873ROG

value: primary cell

value: Treg CD3+ CD4+ CD8- CD25+ CD127-

value: not collected

value: unknown


title: Histone ChIP-seq from middle frontal area 46 (ENCLB091FKE)

description:
https://www.encodeproject.org/experiments/ENCSR597RXN/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac ChIP-seq on middle frontal area 46 tissue female adult (87 years)
experiment encode accession: ENCSR597RXN
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR770XRC
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB091FKE
size range: 200-600

value: middle frontal area 46

value: tissue

value: adult

value: 87 year

value: Rush University

value: ENCBS892ROQ at ENCODE; https://www.encodeproject.org/ENCBS892ROQ/

value: Derived from ENCODE donor ENCDO423GGP; https://www.encodeproject.org/ENCDO423GGP/


title: Histone ChIP-seq from middle frontal area 46 (ENCLB437MES)

description:
https://www.encodeproject.org/experiments/ENCSR597RXN/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on middle frontal area 46 tissue female adult (87 years)
experiment encode accession: ENCSR597RXN
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR770XRC
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB437MES
size range: 200-600


title: Mint-ChIP-seq from CD4-positive, CD25-positive, alpha-beta regulatory T cell (ENCLB225NSK)

description:
https://www.encodeproject.org/experiments/ENCSR677OEF/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K9me3 Mint-ChIP-seq on CD4-positive, CD25-positive, alpha-beta regulatory T cell with multiple sclerosis..
experiment encode accession: ENCSR677OEF
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR918BGN
encode release date: 2021-09-27
lab: Bradley Bernstein, Broad
library encode accession: ENCLB225NSK

value: David Hafler

value: multiple sclerosis

value: ENCBS595ZYR at ENCODE; https://www.encodeproject.org/ENCBS595ZYR/

value: Derived from ENCODE donor ENCDO187BUH; https://www.encodeproject.org/ENCDO187BUH/


title: Mint-ChIP-seq from activated CD8-positive, naive alpha-beta T cell (ENCLB303GZD)

description:
https://www.encodeproject.org/experiments/ENCSR539CSP/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K36me3 Mint-ChIP-seq on activated CD8-positive, naive alpha-beta T cell male adult (42 years)
experiment encode accession: ENCSR539CSP
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR404BIJ
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB303GZD

source_name: Homo sapiens male adult (42 years) activated CD8-positive, naive alpha-beta T primary cell

value: male

value: 42 year

value: Bradley Bernstein, Broad

value: John Stamatoyannopoulos

value: ENCBS591TQB at ENCODE; https://www.encodeproject.org/ENCBS591TQB/

value: Derived from ENCODE donor ENCDO833KUM; https://www.encodeproject.org/ENCDO833KUM/


title: Mint-ChIP-seq from osteocyte (ENCLB294NSX)

description:
https://www.encodeproject.org/experiments/ENCSR429AMH/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K9me3 Mint-ChIP-seq on osteocyte
experiment encode accession: ENCSR429AMH
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR554CUI
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB294NSX

source_name: Homo sapiens female embryo (5 days) osteocyte in vitro differentiated cells originated from osteocyte

value: osteocyte

value: in vitro differentiated cells

value: WA09 derived osteocytes

value: female

value: healthy

value: embryonic

value: 5 day

value: SESCC

value: ENCBS572IFJ at ENCODE; https://www.encodeproject.org/ENCBS572IFJ/

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: Histone ChIP-seq from heart left ventricle (ENCLB060JPW)

description:
https://www.encodeproject.org/experiments/ENCSR428WBJ/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9me3 ChIP-seq on heart left ventricle tissue male adult (43 years).
experiment encode accession: ENCSR428WBJ
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR109IWL
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB060JPW
size range: 200-600

source_name: Homo sapiens male adult (43 years) heart left ventricle tissue

value: heart left ventricle

value: tissue

value: adult

value: 43 year

value: Shin Lin

value: nonischemic (EF 23%, LVEDD 6.1; RV moderate dilation, normal function)

value: ENCBS552CFU at ENCODE; https://www.encodeproject.org/ENCBS552CFU/

value: Derived from ENCODE donor ENCDO967KID; https://www.encodeproject.org/ENCDO967KID/


title: Mint-ChIP-seq from activated T-helper 1 cell (ENCLB906ETG)

description:
https://www.encodeproject.org/experiments/ENCSR537KJA/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 Mint-ChIP-seq on activated T-helper 1 cell male adult (35 years) treated with 1 ?g/mL Interleukin-4 antibody , 30 ng/mL Interleukin-12 subunit alpha , 30 ng/mL Interleukin-12 subunit beta , anti-CD3 and anti-CD28 coated beads
experiment encode accession: ENCSR537KJA
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR188HBL
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB906ETG

value: activated T-helper 1 cell

value: primary cell

value: male

value: 35 year

value: Yijun Ruan, JAX

value: AllCells

value: treatment_term_name:Interleukin-4 antibody; treatment_type:antibody; treatment_term_id:UniProtKB:P29459; treatment_term_name:Interleukin-12 subunit alpha; treatment_type:protein; treatment_term_id:UniProtKB:P29460; treatment_term_name:Interleukin-12 subunit beta; treatment_type:protein; treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS279ECG at ENCODE; https://www.encodeproject.org/ENCBS279ECG/

value: Derived from ENCODE donor ENCDO374BBL; https://www.encodeproject.org/ENCDO374BBL/


title: Histone ChIP-seq from heart left ventricle (ENCLB155QBE)

description:
https://www.encodeproject.org/experiments/ENCSR428WBJ/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K9me3 ChIP-seq on heart left ventricle tissue male adult (43 years).
experiment encode accession: ENCSR428WBJ
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR109IWL
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB155QBE
size range: 200-600

value: heart left ventricle

value: Bradley Bernstein, Broad


title: TF ChIP-seq from middle frontal area 46 (ENCLB905FQX)

description:
https://www.encodeproject.org/experiments/ENCSR676LDQ/
***************
biological replicate number: 1
technical replicate number: 2
description: CTCF TF ChIP-seq on middle frontal area 46 tissue female adult (90 or above years) with Alzheimer's disease.
experiment encode accession: ENCSR676LDQ
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR386UHY
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB905FQX
size range: 200-600

source_name: Homo sapiens female adult (90 or above years) with Alzheimer's disease; middle frontal area 46 tissue

value: CTCF

value: middle frontal area 46

value: tissue

value: female

value: adult

value: 90 or above year

value: Rush University

value: ENCBS145CCA at ENCODE; https://www.encodeproject.org/ENCBS145CCA/

value: Derived from ENCODE donor ENCDO847KYQ; https://www.encodeproject.org/ENCDO847KYQ/


title: TF ChIP-seq from middle frontal area 46 (ENCLB107BVD)

description:
https://www.encodeproject.org/experiments/ENCSR676LDQ/
***************
biological replicate number: 1
technical replicate number: 1
description: CTCF TF ChIP-seq on middle frontal area 46 tissue female adult (90 or above years) with Alzheimer's disease.
experiment encode accession: ENCSR676LDQ
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR386UHY
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB107BVD
size range: 200-600


title: Mint-ChIP-seq from activated CD8-positive, naive alpha-beta T cell (ENCLB253TNP)

description:
https://www.encodeproject.org/experiments/ENCSR539CSP/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 Mint-ChIP-seq on activated CD8-positive, naive alpha-beta T cell male adult (42 years)
experiment encode accession: ENCSR539CSP
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR404BIJ
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB253TNP

value: primary cell

value: male

value: 42 year

value: John Stamatoyannopoulos

value: ENCBS591TQB at ENCODE; https://www.encodeproject.org/ENCBS591TQB/

value: Derived from ENCODE donor ENCDO833KUM; https://www.encodeproject.org/ENCDO833KUM/


title: Mint-ChIP-seq from activated T-helper 1 cell (ENCLB354UWU)

description:
https://www.encodeproject.org/experiments/ENCSR537KJA/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me3 Mint-ChIP-seq on activated T-helper 1 cell male adult (35 years) treated with 1 ?g/mL Interleukin-4 antibody , 30 ng/mL Interleukin-12 subunit alpha , 30 ng/mL Interleukin-12 subunit beta , anti-CD3 and anti-CD28 coated beads
experiment encode accession: ENCSR537KJA
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR188HBL
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB354UWU

value: activated T-helper 1 cell

value: 35 year

value: Yijun Ruan, JAX

value: AllCells

value: treatment_term_name:Interleukin-4 antibody; treatment_type:antibody; treatment_term_id:UniProtKB:P29459; treatment_term_name:Interleukin-12 subunit alpha; treatment_type:protein; treatment_term_id:UniProtKB:P29460; treatment_term_name:Interleukin-12 subunit beta; treatment_type:protein; treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS279ECG at ENCODE; https://www.encodeproject.org/ENCBS279ECG/

value: Derived from ENCODE donor ENCDO374BBL; https://www.encodeproject.org/ENCDO374BBL/


title: Control ChIP-seq from middle frontal area 46 (ENCLB031GEC)

description:
https://www.encodeproject.org/experiments/ENCSR427DIF/
***************
biological replicate number: 1
technical replicate number: 2
description: Control ChIP-seq on middle frontal area 46 tissue female adult (90 or above years) with Cognitive impairment.
experiment encode accession: ENCSR427DIF
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB031GEC
size range: 200-600

source_name: Homo sapiens female adult (90 or above years) with Cognitive impairment; middle frontal area 46 tissue

value: middle frontal area 46

value: tissue

value: female

value: adult

value: 90 or above year

value: Bradley Bernstein, Broad

value: ENCBS296QVB at ENCODE; https://www.encodeproject.org/ENCBS296QVB/

value: Derived from ENCODE donor ENCDO448YMQ; https://www.encodeproject.org/ENCDO448YMQ/


title: Mint-ChIP-seq from CD4-positive, CD25-positive, alpha-beta regulatory T cell (ENCLB491KTE)

description:
https://www.encodeproject.org/experiments/ENCSR603LTN/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me3 Mint-ChIP-seq on CD4-positive, CD25-positive, alpha-beta regulatory T cell with multiple sclerosis..
experiment encode accession: ENCSR603LTN
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR918BGN
encode release date: 2021-09-27
lab: Bradley Bernstein, Broad
library encode accession: ENCLB491KTE

value: primary cell

value: Treg CD3+ CD4+ CD8- CD25+ CD127-

value: not collected

value: unknown

value: David Hafler

value: multiple sclerosis

value: ENCBS595ZYR at ENCODE; https://www.encodeproject.org/ENCBS595ZYR/

value: Derived from ENCODE donor ENCDO187BUH; https://www.encodeproject.org/ENCDO187BUH/


title: Control ChIP-seq from middle frontal area 46 (ENCLB605EYX)

description:
https://www.encodeproject.org/experiments/ENCSR427DIF/
***************
biological replicate number: 1
technical replicate number: 1
description: Control ChIP-seq on middle frontal area 46 tissue female adult (90 or above years) with Cognitive impairment.
experiment encode accession: ENCSR427DIF
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB605EYX
size range: 200-600

value: Rush University


title: Mint-ChIP-seq from CD4-positive naive resting alpha-beta T cell (ENCLB962HXD)

description:
https://www.encodeproject.org/experiments/ENCSR594FUA/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K9me3 Mint-ChIP-seq on CD4-positive naive resting alpha-beta T cell male adult (35 years) treated with anti-CD3 and anti-CD28 coated beads
experiment encode accession: ENCSR594FUA
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR490HRA
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB962HXD

source_name: Homo sapiens male adult (35 years) CD4-positive naive resting alpha-beta T primary cell treated with anti-CD3 and anti-CD28 coated beads

value: male

value: 35 year

value: Yijun Ruan, JAX

value: AllCells

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody;

value: ENCBS266XPE at ENCODE; https://www.encodeproject.org/ENCBS266XPE/

value: Derived from ENCODE donor ENCDO374BBL; https://www.encodeproject.org/ENCDO374BBL/


title: Histone ChIP-seq from middle frontal area 46 (ENCLB936VLI)

description:
https://www.encodeproject.org/experiments/ENCSR424IJM/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on middle frontal area 46 tissue female adult (90 or above years) with Cognitive impairment.
experiment encode accession: ENCSR424IJM
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR427DIF
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB936VLI
size range: 200-600

value: middle frontal area 46

value: tissue

value: female

value: adult

value: 90 or above year

value: Bradley Bernstein, Broad

value: ENCBS296QVB at ENCODE; https://www.encodeproject.org/ENCBS296QVB/

value: Derived from ENCODE donor ENCDO448YMQ; https://www.encodeproject.org/ENCDO448YMQ/


title: Mint-ChIP-seq from CD4-positive naive resting alpha-beta T cell (ENCLB962NKY)

description:
https://www.encodeproject.org/experiments/ENCSR594FUA/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9me3 Mint-ChIP-seq on CD4-positive naive resting alpha-beta T cell male adult (35 years) treated with anti-CD3 and anti-CD28 coated beads
experiment encode accession: ENCSR594FUA
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR490HRA
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB962NKY

value: primary cell


title: Mint-ChIP-seq from activated CD4 positive, naive alpha-beta T cell (ENCLB183IML)

description:
https://www.encodeproject.org/experiments/ENCSR592QUI/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9me3 Mint-ChIP-seq on activated CD4 positive, naive alpha-beta T cell male adult (42 years)
experiment encode accession: ENCSR592QUI
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR186VDY
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB183IML

source_name: Homo sapiens male adult (42 years) activated CD4 positive, naive alpha-beta T primary cell

value: 42 year

value: John Stamatoyannopoulos

value: ENCBS607NQI at ENCODE; https://www.encodeproject.org/ENCBS607NQI/

value: Derived from ENCODE donor ENCDO833KUM; https://www.encodeproject.org/ENCDO833KUM/


title: Mint-ChIP-seq from activated CD4 positive, naive alpha-beta T cell (ENCLB833EAG)

description:
https://www.encodeproject.org/experiments/ENCSR592QUI/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K9me3 Mint-ChIP-seq on activated CD4 positive, naive alpha-beta T cell male adult (42 years)
experiment encode accession: ENCSR592QUI
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR186VDY
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB833EAG

value: male


title: Mint-ChIP-seq from osteocyte (ENCLB962NBY)

description:
https://www.encodeproject.org/experiments/ENCSR429AMH/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9me3 Mint-ChIP-seq on osteocyte
experiment encode accession: ENCSR429AMH
assay title: Mint-ChIP-seq
assembly: GRCh38
possible controls: ENCSR554CUI
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB962NBY

value: osteocyte

value: in vitro differentiated cells

value: WA09 derived osteocytes

value: healthy

value: embryonic

value: 5 day

value: SESCC

value: ENCBS572IFJ at ENCODE; https://www.encodeproject.org/ENCBS572IFJ/

value: Derived from ENCODE donor ENCDO222AAA; https://www.encodeproject.org/ENCDO222AAA/


title: Control ChIP-seq from middle frontal area 46 (ENCLB865DAB)

description:
https://www.encodeproject.org/experiments/ENCSR535VLV/
***************
biological replicate number: 1
technical replicate number: 2
description: Control ChIP-seq on middle frontal area 46 tissue male adult (84 years).
experiment encode accession: ENCSR535VLV
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB865DAB
size range: 200-600

source_name: Homo sapiens male adult (84 years) middle frontal area 46 tissue

value: middle frontal area 46

value: tissue

value: adult

value: 84 year

value: Bradley Bernstein, Broad

value: Rush University

value: ENCBS158KQX at ENCODE; https://www.encodeproject.org/ENCBS158KQX/

value: Derived from ENCODE donor ENCDO999WDR; https://www.encodeproject.org/ENCDO999WDR/


title: Control ChIP-seq from middle frontal area 46 (ENCLB044VAJ)

description:
https://www.encodeproject.org/experiments/ENCSR535VLV/
***************
biological replicate number: 1
technical replicate number: 1
description: Control ChIP-seq on middle frontal area 46 tissue male adult (84 years).
experiment encode accession: ENCSR535VLV
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB044VAJ
size range: 200-600

value: male


title: Control ChIP-seq from middle frontal area 46 (ENCLB749EJD)

description:
https://www.encodeproject.org/experiments/ENCSR534WQA/
***************
biological replicate number: 1
technical replicate number: 2
description: Control ChIP-seq on middle frontal area 46 tissue female adult (88 years) with Alzheimer's disease.
experiment encode accession: ENCSR534WQA
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB749EJD
size range: 200-600

source_name: Homo sapiens female adult (88 years) with Alzheimer's disease; middle frontal area 46 tissue

value: female

value: 88 year

value: ENCBS995IIS at ENCODE; https://www.encodeproject.org/ENCBS995IIS/

value: Derived from ENCODE donor ENCDO070VNS; https://www.encodeproject.org/ENCDO070VNS/


title: Control ChIP-seq from middle frontal area 46 (ENCLB343VCM)

description:
https://www.encodeproject.org/experiments/ENCSR534WQA/
***************
biological replicate number: 1
technical replicate number: 1
description: Control ChIP-seq on middle frontal area 46 tissue female adult (88 years) with Alzheimer's disease.
experiment encode accession: ENCSR534WQA
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB343VCM
size range: 200-600


title: Control ChIP-seq from middle frontal area 46 (ENCLB749XCO)

description:
https://www.encodeproject.org/experiments/ENCSR534KYQ/
***************
biological replicate number: 1
technical replicate number: 2
description: Control ChIP-seq on middle frontal area 46 tissue male adult (87 years) with Alzheimer's disease, Cognitive impairment
experiment encode accession: ENCSR534KYQ
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2021-06-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB749XCO
size range: 200-600

source_name: Homo sapiens male adult (87 years) with Alzheimer's disease, Cognitive impairment; middle frontal area 46 tissue

value: 87 year

value: ENCBS584OEO at ENCODE; https://www.encodeproject.org/ENCBS584OEO/

value: Derived from ENCODE donor ENCDO776JEI; https://www.encodeproject.org/ENCDO776JEI/


title: TF ChIP-seq from middle frontal area 46 (ENCLB920XJF)

description:
https://www.encodeproject.org/experiments/ENCSR423ZUM/
***************
biological replicate number: 1
technical replicate number: 1
description: CTCF ChIP-seq on dorsolateral prefrontal cortex tissue female adult (90 or above years) originated from dorsolateral prefrontal cortex
experiment encode accession: ENCSR423ZUM
assay title: TF ChIP-seq
assembly: GRCh38
possible controls: ENCSR613JAK
encode release date: 2021-07-23
lab: Bradley Bernstein, Broad
library encode accession: ENCLB920XJF
size range: 200-600

source_name: Homo sapiens female adult (90 or above years) middle frontal area 46 tissue with mild cognitive impairment

value: CTCF

value: 90 or above year

value: ENCBS345MLG at ENCODE; https://www.encodeproject.org/ENCBS345MLG/

value: Derived from ENCODE donor ENCDO660TGP; https://www.encodeproject.org/ENCDO660TGP/


title: Histone ChIP-seq from middle frontal area 46 (ENCLB811RVH)

description:
https://www.encodeproject.org/experiments/ENCSR532SRK/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac ChIP-seq on middle frontal area 46 tissue male adult (83 years).
experiment encode accession: ENCSR532SRK
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR058XPK
encode release date: 2021-09-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB811RVH
size range: 200-600

source_name: Homo sapiens male adult (83 years) middle frontal area 46 tissue

value: middle frontal area 46

value: tissue

value: adult

value: 83 year

value: ENCBS959TDJ at ENCODE; https://www.encodeproject.org/ENCBS959TDJ/

value: Derived from ENCODE donor ENCDO592ZWW; https://www.encodeproject.org/ENCDO592ZWW/


title: Histone ChIP-seq from middle frontal area 46 (ENCLB242QYT)

description:
https://www.encodeproject.org/experiments/ENCSR423WXD/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27me3 ChIP-seq on middle frontal area 46 tissue male adult (87 years) with Alzheimer's disease, Cognitive impairment
experiment encode accession: ENCSR423WXD
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR534KYQ
encode release date: 2021-06-24
lab: Bradley Bernstein, Broad
library encode accession: ENCLB242QYT
size range: 200-600

value: male

value: Bradley Bernstein, Broad

value: Rush University