title: S001206

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S001199

status: Public on May 09 2022

type: SRA

city: Lund

first: Lao

middle: H

last: Saal

address: Scheelevägen 2, MV404B2

department: Department of Oncology and Pathology

country: Sweden

institute: Lund University

description: ER/PgR/HER2/Ki67: 0 negative/normal/low, 1 positive/amplified/high

library_source: transcriptomic

data_processing:
Base-calling using manufacturer's on-instrument software.
Demultiplexing was done with Picard versions 1.120 or 1.128. IlluminaBasecallsToFastq parameters used were ADAPTERS_TO_CHECK=INDEXED, ADAPTERS_TO_CHECK=PAIRED_END, INCLUDE_NON_PF_READS=false
Filtering to remove reads that align (using Bowtie 2 with default parameters except -k 1 --phred33 --local) to ribosomal RNA/DNA (GenBank loci NR_023363.1, NR_003285.2, NR_003286.2, NR_003287.2, X12811.1, U13369.1), phiX174 Illumina control (NC_001422.1), and sequences contained in the UCSC RepeatMasker track (downloaded March 14, 2011).
Fragment size distribution (mean and width) for the alignment step was estimated for each sample using bowtie2 2.2.3 and 2.2.5. Parameter set during estimation were -fr, -k 1, --phred33, --local, and -u 100000, using human genome assembly GRCh38.
Remaining reads were aligned using HISAT2 v 2.1.0 to the human genome reference GRCh38/hg38 together with 104,133 transcript annotations from the UCSC knownGenes table (downloaded September 22, 2014) using the GENCODE release 27 transcriptome model, with default parameters except --no-unal --non-deterministic --novel-splicesite-outfile ${SPLICEFILE}  --rna-strandness RF. HISAT2 indexes were created using the --snp parameter and dbSNP build 150.
Gene expression data in FPKM ( fragments per kilobase of transcript per million mapped reads) were generated using StringTie v1.3.3b (default parameters including --rf -e) using protein coding transcripts from GENCODE release 27 as transcriptome model. Novel transcripts were discarded. An FPKM gene expression matrix was generated from .ctab files using tximport and subsequently transformed to TPM values adding to each expression measurement 0.1, followed by log2 transformation.
PAM50 subtyping was performed using an implementation of the Parker method (Parker et al., J.Clin Oncol 2009). In short, to avoid context dependency when assigning PAM50 subtype by nearest-centroid, a fixed reference was selected to match the original cohort used by Parker et al. with respect to available clinical characteristics. Before subtyping tumors in this study, gene expression of the PAM50 genes for each tumor was centered to the reference set separately using custom R scripts.
Spearman rank correlation was used to determine correlations between expression of ESR1 and ESR2. Kruskal-Wallis non-parametric test and Wilcoxon rank sum test were used to compare and plot expression of the ESR1 and ESR2 genes in various clinical groups such as PAM50 subtype and age groups in the SCAN-B cohort. Transformed ESR2 expression data was divided into tertiles, with the first tertile defined as ESR2-high, and the bottom two tertiles at ESR2-low. Mann Whitney U test and Fisher’s exact test were used to evaluate significant differences in the clinicopathological variables for the ESR2-high and ESR2-low groups. Survival analysis was performed by Kaplan-Meier and Cox regression survival analyses. All analysis was performed for a cohort of 3207 samples from patients enrolled in the SCAN-B study.
Assembly: Human genome reference GRCh38/hg38.
Supplementary files format and content: Gene expression in TPM in CSV format.

molecule: polyA RNA

organism: Homo sapiens

source_name: Primary breast tumor

extract_protocol:
QIAGEN AllPrep
Poly(A) mRNA is isolated from the total RNA in up to 96-well microtiter plate format by two rounds of purification with Dynabeads Oligo (dT)25 (Invitrogen) using a KingFisher Flex magnetic particle processor (ThermoScientific). Zinc-mediated fragmentation (Ambion) is performed and the fragmented mRNA retrieved using column purification (Zymo-Spin I-96 plates; Zymo). The sequencing library generation protocol is a modification of the dUTP method, which importantly retains the directionality (stranded-ness) of the sequenced RNA molecules. First strand cDNA synthesis is performed using random hexamers and standard dNTP mix followed by cleanup using Sephadex gel filtration (Illustra AutoScreen-96A plates; GE Healthcare), and second strand cDNA synthesis is performed using dUTP in place of dTTP in the dNTP-mix and cleanup using Zymo-Spin I-96 plates. The cDNA is end-repaired and A-tailed, and diluted TruSeq adapters with barcodes are ligated using a modified protocol (Illumina). Adapter-ligated cDNA is then size-selected to remove short oligonucleotides using carboxylic acid (CA) paramagnetic beads (Invitrogen) and polyethylene glycol (PEG), similar to the previously described methods, and automated on the KingFisher Flex. The second cDNA strand is digested using uracil-DNA glycosylase and the product is enriched by 12 PCR cycles (Illumina). The PCR product undergoes two cycles of size selection using CA-beads and varying concentrations of PEG, first to exclude DNA fragments >700 bp and then to exclude fragments <200 bp. Quality control is performed on control libraries using Qubit fluorometric measurement (Life Technologies) and Caliper LabChip XT microcapillary gel electrophoresis. Typically, 10-24 barcoded libraries are included in a pool and each pool is sequenced in at least one lane across dual flowcells. Paired-end sequencing of 50 bp read-length is performed on an Illumina HiSeq 2000 or NextSeq 500 instrument.

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

value: NodeNegative

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

value: LumA

value: Ductal

tag: overall survival days

tag: overall survival years

tag: overall survival event

tag: relapse free interval event

tag: esr1 expression

tag: esr2 expression


title: S001198

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S001197

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: er status

tag: pgr status

value: LumB


title: S001202

tag: her2 status

tag: ki67 status

tag: nhg

value: Basal

value: TNBC

tag: overall survival days

tag: overall survival years

tag: overall survival event

tag: relapse free interval event


title: S001200

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

tag: esr2 expression


title: S001204

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: relapse free interval days

tag: relapse free interval years


title: S001188

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival days

tag: overall survival years


title: S001190

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: overall survival event

tag: relapse free interval event


title: S001191

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: esr1 expression

tag: esr2 expression


title: S001194

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S001193

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S001196

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: overall survival event

tag: relapse free interval event


title: S001192

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: esr1 expression

tag: esr2 expression


title: S001189

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S001180

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: overall survival days

tag: overall survival years


title: S001203

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival event

tag: relapse free interval event


title: S001224

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

tag: esr2 expression


title: S001187

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: relapse free interval days

tag: relapse free interval years


title: S001186

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival days

tag: overall survival years


title: S001185

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: overall survival event

tag: relapse free interval event


title: S001177

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: esr1 expression

tag: esr2 expression


title: S001174

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

value: Lobular

tag: relapse free interval days

tag: relapse free interval years


title: S001175

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S001172

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: overall survival event

tag: relapse free interval event


title: S001167

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: esr1 expression

tag: esr2 expression


title: S001163

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S001171

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: overall survival days

tag: overall survival years


title: S001169

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

value: Other

tag: overall survival event

tag: relapse free interval event


title: S001173

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

tag: esr2 expression


title: S001176

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: relapse free interval days

tag: relapse free interval years


title: S001159

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival days

tag: overall survival years


title: S001168

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: overall survival event

tag: relapse free interval event


title: S001164

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

value: SubMicroMet

tag: esr1 expression

tag: esr2 expression


title: S001160

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S001162

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S001179

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: overall survival event

tag: relapse free interval event


title: S001149

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: esr1 expression

tag: esr2 expression


title: S001178

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S001158

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

value: Unclassified

tag: overall survival days

tag: overall survival years


title: S001161

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival event

tag: relapse free interval event


title: S001146

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

tag: esr2 expression


title: S001148

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: relapse free interval days

tag: relapse free interval years


title: S001153

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival days

tag: overall survival years


title: S001157

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: overall survival event

tag: relapse free interval event


title: S001151

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: esr1 expression

tag: esr2 expression


title: S001152

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S001154

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S001143

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: overall survival event

tag: relapse free interval event


title: S001139

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: esr1 expression

tag: esr2 expression


title: S001145

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S001155

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: overall survival days

tag: overall survival years


title: S001134

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival event

tag: relapse free interval event


title: S001166

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

tag: esr2 expression


title: S001137

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: relapse free interval days

tag: relapse free interval years


title: S001156

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival days

tag: overall survival years


title: S001131

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: overall survival event

tag: relapse free interval event


title: S001130

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: esr1 expression

tag: esr2 expression


title: S001129

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S001142

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S001121

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: overall survival event

tag: relapse free interval event


title: S001116

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: esr1 expression

tag: esr2 expression


title: S001118

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S001119

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: overall survival days

tag: overall survival years


title: S001150

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival event

tag: relapse free interval event


title: S001138

tag: pam50 subtype

value: Normal

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

tag: esr2 expression


title: S001132

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: relapse free interval days

tag: relapse free interval years


title: S001111

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival days

tag: overall survival years


title: S001125

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: overall survival event

tag: relapse free interval event


title: S001105

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: esr1 expression

tag: esr2 expression


title: S001144

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S001128

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S001106

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: overall survival event

tag: relapse free interval event


title: S001124

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: esr1 expression

tag: esr2 expression


title: S001141

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S001108

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: overall survival days

tag: overall survival years


title: S001102

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival event

tag: relapse free interval event


title: S001101

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

tag: esr2 expression


title: S001123

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: relapse free interval days

tag: relapse free interval years


title: S001115

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival days

tag: overall survival years


title: S001100

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: overall survival event

tag: relapse free interval event


title: S001097

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: esr1 expression

tag: esr2 expression


title: S001112

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S001093

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S001113

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: overall survival event

tag: relapse free interval event


title: S001107

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: esr1 expression

tag: esr2 expression


title: S001135

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S001110

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: overall survival days

tag: overall survival years


title: S001090

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival event

tag: relapse free interval event


title: S001109

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

tag: esr2 expression


title: S001096

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: relapse free interval days

tag: relapse free interval years


title: S001079

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival days

tag: overall survival years


title: S001104

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: overall survival event

tag: relapse free interval event


title: S001099

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: esr1 expression

tag: esr2 expression


title: S001095

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S001092

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S001077

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: overall survival event

tag: relapse free interval event


title: S001073

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: esr1 expression

tag: esr2 expression


title: S001087

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S001098

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: overall survival days

tag: overall survival years


title: S001068

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival event

tag: relapse free interval event


title: S001083

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

tag: esr2 expression


title: S001085

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: relapse free interval days

tag: relapse free interval years


title: S001086

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival days

tag: overall survival years


title: S001084

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: overall survival event

tag: relapse free interval event


title: S001091

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: esr1 expression

tag: esr2 expression


title: S001080

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S001078

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S001082

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: overall survival event

tag: relapse free interval event


title: S001076

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: esr1 expression

tag: esr2 expression


title: S001057

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S001051

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: overall survival days

tag: overall survival years


title: S001054

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival event

tag: relapse free interval event


title: S001050

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

tag: esr2 expression


title: S001072

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: relapse free interval days

tag: relapse free interval years


title: S001067

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival days

tag: overall survival years


title: S001081

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: overall survival event

tag: relapse free interval event


title: S001063

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: esr1 expression

tag: esr2 expression


title: S001075

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S001069

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S001064

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: overall survival event

tag: relapse free interval event


title: S001071

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tag: esr2 expression


title: S001065

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tag: clinical groups

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tag: chemo treated

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tag: relapse free interval years


title: S001061

tag: scanb external id

tag: age at diagnosis

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tag: lymph node status

tag: overall survival days

tag: overall survival years


title: S001056

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival event

tag: relapse free interval event


title: S001042

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

tag: esr2 expression


title: S001049

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: relapse free interval days

tag: relapse free interval years


title: S001048

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival days

tag: overall survival years


title: S001039

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: overall survival event

tag: relapse free interval event


title: S001046

tag: scanb external id

tag: age at diagnosis

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tag: lymph node group

tag: lymph node status

tag: esr1 expression

tag: esr2 expression


title: S001045

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S001052

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S001047

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: overall survival event

tag: relapse free interval event


title: S001036

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: esr1 expression

tag: esr2 expression


title: S001041

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S001034

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: overall survival days

tag: overall survival years


title: S001060

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival event

tag: relapse free interval event


title: S001040

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

tag: esr2 expression


title: S001037

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: relapse free interval days

tag: relapse free interval years


title: S001035

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival days

tag: overall survival years


title: S001031

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: overall survival event

tag: relapse free interval event


title: S001029

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: esr1 expression

tag: esr2 expression


title: S001028

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S001032

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S001033

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: overall survival event

tag: relapse free interval event


title: S001030

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: esr1 expression

tag: esr2 expression


title: S001055

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S001024

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: overall survival days

tag: overall survival years


title: S001025

tag: er status

tag: pgr status

tag: her2 status

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title: S001022

tag: pam50 subtype

tag: clinical groups

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tag: esr2 expression


title: S001023

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tag: relapse free interval days

tag: relapse free interval years


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tag: pgr status

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title: S001018

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title: S001020

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title: S001006

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title: S001004

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tag: overall survival days

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tag: er status

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tag: her2 status

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tag: relapse free interval event


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tag: pam50 subtype

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tag: relapse free interval years


title: S001003

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title: S000997

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title: S000991

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tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S000998

tag: pam50 subtype

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tag: overall survival days

tag: overall survival years


title: S000990

tag: scanb external id

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tag: lymph node status

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tag: er status

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tag: nhg

tag: esr1 expression

tag: esr2 expression


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tag: pam50 subtype

tag: clinical groups

tag: histopathological type

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tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S001015

tag: scanb external id

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tag: tumor size

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tag: lymph node status

tag: overall survival days

tag: overall survival years


title: S000989

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tag: esr1 expression

tag: esr2 expression


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tag: scanb external id

tag: age at diagnosis

tag: tumor size

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tag: lymph node status

tag: relapse free interval days

tag: relapse free interval years


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tag: overall survival days

tag: overall survival years


title: S000988

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title: S001026

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tag: relapse free interval event


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tag: relapse free interval years


title: S000972

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tag: overall survival years


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tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: overall survival event

tag: relapse free interval event


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tag: esr1 expression

tag: esr2 expression


title: S000974

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title: S000973

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tag: overall survival days

tag: overall survival years


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tag: overall survival days

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title: S000955

tag: scanb external id

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tag: esr2 expression


title: S000949

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tag: relapse free interval days

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title: S000950

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

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tag: overall survival days

tag: overall survival years


title: S000947

tag: scanb external id

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tag: overall survival event

tag: relapse free interval event


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title: S000942

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title: S000938

tag: scanb external id

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tag: overall survival days

tag: overall survival years


title: S000939

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tag: ki67 status

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tag: overall survival event

tag: relapse free interval event


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title: S000935

tag: scanb external id

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tag: relapse free interval days

tag: relapse free interval years


title: S000932

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tag: nhg

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tag: overall survival years


title: S000933

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

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tag: relapse free interval event


title: S000934

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tag: esr1 expression

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title: S000931

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tag: nhg

tag: relapse free interval days

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title: S000928

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S000930

tag: scanb external id

tag: age at diagnosis

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tag: lymph node group

tag: lymph node status

tag: overall survival event

tag: relapse free interval event


title: S000929

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: esr1 expression

tag: esr2 expression


title: S000948

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

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tag: relapse free interval days

tag: relapse free interval years


title: S000927

tag: scanb external id

tag: age at diagnosis

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tag: lymph node status

tag: overall survival days

tag: overall survival years


title: S000926

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tag: clinical groups

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tag: esr2 expression


title: S000925

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tag: age at diagnosis

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tag: lymph node group

tag: lymph node status

tag: relapse free interval days

tag: relapse free interval years


title: S000923

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival days

tag: overall survival years


title: S000922

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

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tag: overall survival event

tag: relapse free interval event


title: S000919

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

value: NX

tag: lymph node status

tag: esr1 expression

tag: esr2 expression


title: S000921

tag: er status

tag: pgr status

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tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S000941

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S000912

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tag: lymph node status

tag: overall survival event

tag: relapse free interval event


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tag: esr1 expression

tag: esr2 expression


title: S000915

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tag: clinical groups

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tag: relapse free interval days

tag: relapse free interval years


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tag: age at diagnosis

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tag: lymph node group

tag: lymph node status

tag: overall survival days

tag: overall survival years


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tag: pgr status

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tag: overall survival event

tag: relapse free interval event


title: S000903

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tag: relapse free interval years


title: S000898

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tag: overall survival days

tag: overall survival years


title: S000899

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tag: histopathological type

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tag: chemo treated

tag: overall survival event

tag: relapse free interval event


title: S000895

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tag: esr1 expression

tag: esr2 expression


title: S000916

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tag: relapse free interval days

tag: relapse free interval years


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tag: overall survival days

tag: overall survival years


title: S000876

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tag: relapse free interval years


title: S000889

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tag: overall survival days

tag: overall survival years


title: S000887

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title: S000924

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tag: esr1 expression

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title: S000894

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tag: relapse free interval days

tag: relapse free interval years


title: S000875

tag: er status

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tag: overall survival days

tag: overall survival years


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title: S000880

tag: scanb external id

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tag: esr2 expression


title: S000881

tag: er status

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tag: relapse free interval days

tag: relapse free interval years


title: S000874

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tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S000879

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tag: lymph node status

tag: overall survival event

tag: relapse free interval event


title: S000910

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tag: nhg

tag: esr1 expression

tag: esr2 expression


title: S000873

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tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S000857

tag: scanb external id

tag: age at diagnosis

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tag: lymph node group

tag: lymph node status

tag: overall survival days

tag: overall survival years


title: S000848

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival event

tag: relapse free interval event


title: S000867

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

tag: esr2 expression


title: DSP-1001660003684-A-F09

status: Public on May 12 2022

city: Cambridge

first: Karthik

last: Jagadeesh

state: MA

address: 415 Main St

department: Human Cell Atlas

country: USA

institute: Broad Institute

data_processing:
Library strategy: NanoString whole-transcriptome digital spatial profiling
Process FASTQ sequencing files (from Illumina NGS run) to DCC digital count files using Nanostring GeoMx NGS Pipeline v1.0
Generate raw and normalized count matrices using Nanostring azorius and hydra scripts, as described in associated manuscript
Assembly: Nanostring GeoMx human whole transcriptome atlas; found in geomx_ngs_data_second_acquisition_WTA_Hs_R_NGS_WTA_v1.0.pkc
Supplementary files format and content: Txt file of uncollapsed raw counts matrix; found in hPDAC_WTA_20210222T2101_TargetCountMatrix.txt
Supplementary files format and content: Txt file of bioprobe QC counts matrix; found in hPDAC_WTA_20210222T2101_BioProbeCountMatrix.txt
Supplementary files format and content: Txt file of negative probe normalized counts matrix; found in hPDAC_WTA_20210222T2101_NegNorm_TargetCountMatrix.txt
Supplementary files format and content: Txt file of q3 normalized counts matrix; found in hPDAC_WTA_20210222T2101_Q3Norm_TargetCountMatrix.txt

molecule: total RNA

source_name: Pancreas

extract_protocol:
In brief, we sectioned clinical FFPE blocks at 5 um onto SuperFrost Plus microscopy slides and then followed the manufacturer instructions for RNA (NanoString) with minor modifications as noted in the associated manuscript.
Libraries were constructed according to manufacturer protocols (NanoString) for sequencing on a NovoSeq S2 (Illumina) with the following paired end read configuration: read 1, 27 nt; read 2, 27 nt; index 1, 8 nt; index 2, 8 nt.

treatment_protocol: 14 specimens received no treatment prior to resection; 7 specimens received neoadjuvant chemotherapy, radiotherapy, losartan, and/or nivolumab prior to resection

tag: tissue

value: Pancreas

tag: treatment / other annotation

value: Untreated


title: S000866

tag: scanb external id

tag: age at diagnosis

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: overall survival days

tag: overall survival years

tag: relapse free interval days

tag: relapse free interval years


title: S000861

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: pam50 subtype

tag: clinical groups

tag: overall survival event

tag: relapse free interval event


title: S000845

tag: scanb external id

tag: age at diagnosis

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

tag: esr2 expression


title: S000831

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: overall survival days

tag: overall survival years

tag: relapse free interval days

tag: relapse free interval years


title: S000901

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: pam50 subtype

tag: clinical groups


title: S000869

tag: scanb external id

tag: age at diagnosis

tag: histopathological type

tag: endocrine treated

tag: chemo treated

tag: overall survival event

tag: relapse free interval event


title: S000908

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: overall survival days

tag: overall survival years

tag: esr1 expression

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title: S000829

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S000850

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: endocrine treated

tag: chemo treated


title: S000828

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: overall survival days

tag: overall survival years

tag: overall survival event

tag: relapse free interval event


title: S000826

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: esr1 expression

tag: esr2 expression


title: S000844

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: relapse free interval days

tag: relapse free interval years


title: S000862

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S000852

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival event

tag: relapse free interval event


title: S000847

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: esr1 expression

tag: esr2 expression


title: S000823

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S000836

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival days

tag: overall survival years


title: S000835

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival event

tag: relapse free interval event


title: S000838

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

tag: esr2 expression


title: S000821

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S000843

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival days

tag: overall survival years


title: S000814

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival event

tag: relapse free interval event


title: S000807

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: esr1 expression

tag: esr2 expression


title: S000830

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: relapse free interval days

tag: relapse free interval years


title: S000832

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S000822

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival event

tag: relapse free interval event


title: S000824

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: esr1 expression

tag: esr2 expression


title: S000813

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S000809

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival days

tag: overall survival years


title: S000803

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival event

tag: relapse free interval event


title: S000825

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

tag: esr2 expression


title: S000812

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S000802

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival days

tag: overall survival years


title: S000801

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival event

tag: relapse free interval event


title: S000805

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: esr1 expression

tag: esr2 expression


title: S000804

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: relapse free interval days

tag: relapse free interval years


title: S000800

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S000793

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival event

tag: relapse free interval event


title: S000797

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: esr1 expression

tag: esr2 expression


title: S000789

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S000788

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival days

tag: overall survival years


title: S000795

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival event

tag: relapse free interval event


title: S000792

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

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title: S000791

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S000796

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival days

tag: overall survival years


title: S000906

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival event

tag: relapse free interval event


title: S000786

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: esr1 expression

tag: esr2 expression


title: S000781

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: relapse free interval days

tag: relapse free interval years


title: S000784

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S000785

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival event

tag: relapse free interval event


title: S000780

tag: scanb external id

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title: S000777

tag: tumor size

tag: lymph node group

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tag: endocrine treated

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tag: relapse free interval days

tag: relapse free interval years


title: S000779

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival days

tag: overall survival years


title: S000776

tag: scanb external id

tag: age at diagnosis

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tag: clinical groups

tag: histopathological type

tag: overall survival event

tag: relapse free interval event


title: S000774

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

tag: esr2 expression


title: S000775

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S000771

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival days

tag: overall survival years


title: S000773

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival event

tag: relapse free interval event


title: S000763

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: esr1 expression

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title: S000769

tag: scanb external id

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tag: histopathological type

tag: relapse free interval days

tag: relapse free interval years


title: S000767

tag: tumor size

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tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S000762

tag: er status

tag: pgr status

tag: her2 status

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tag: nhg

tag: overall survival event

tag: relapse free interval event


title: S000768

tag: scanb external id

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title: S000751

tag: tumor size

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tag: relapse free interval days

tag: relapse free interval years


title: S000761

tag: er status

tag: pgr status

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tag: nhg

tag: overall survival days

tag: overall survival years


title: S000783

tag: scanb external id

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tag: overall survival event

tag: relapse free interval event


title: S000745

tag: tumor size

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tag: endocrine treated

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tag: esr1 expression

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title: S000782

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S000747

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival days

tag: overall survival years


title: S000746

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

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tag: overall survival event

tag: relapse free interval event


title: S000740

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: esr1 expression

tag: esr2 expression


title: S000744

tag: scanb external id

tag: age at diagnosis

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tag: clinical groups

tag: histopathological type

tag: relapse free interval days

tag: relapse free interval years


title: S000738

tag: tumor size

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tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S000737

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival event

tag: relapse free interval event


title: S000733

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: esr1 expression

tag: esr2 expression


title: S000731

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S000729

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival days

tag: overall survival years


title: S000730

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival event

tag: relapse free interval event


title: S000728

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

tag: esr2 expression


title: S000725

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S000727

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival days

tag: overall survival years


title: S000724

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival event

tag: relapse free interval event


title: S000717

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: esr1 expression

tag: esr2 expression


title: S000714

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: relapse free interval days

tag: relapse free interval years


title: S000716

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S000712

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival event

tag: relapse free interval event


title: S000722

tag: scanb external id

tag: age at diagnosis

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tag: clinical groups

tag: histopathological type

tag: esr1 expression

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title: S000715

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S000713

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival days

tag: overall survival years


title: S000750

tag: scanb external id

tag: age at diagnosis

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tag: clinical groups

tag: histopathological type

tag: overall survival event

tag: relapse free interval event


title: S000700

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

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title: S000703

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S000701

tag: scanb external id

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tag: histopathological type

tag: overall survival days

tag: overall survival years


title: S000694

tag: tumor size

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title: S000690

tag: er status

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tag: nhg

tag: esr1 expression

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title: S000691

tag: scanb external id

tag: age at diagnosis

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tag: relapse free interval days

tag: relapse free interval years


title: S000689

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S000688

tag: er status

tag: pgr status

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tag: ki67 status

tag: nhg

tag: overall survival event

tag: relapse free interval event


title: S000697

tag: scanb external id

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tag: histopathological type

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title: S000686

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S000695

tag: er status

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tag: nhg

tag: overall survival days

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title: S000684

tag: scanb external id

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tag: relapse free interval event


title: S000683

tag: tumor size

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tag: endocrine treated

tag: chemo treated

tag: esr1 expression

tag: esr2 expression


title: S000675

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S000678

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival days

tag: overall survival years


title: S000711

tag: tumor size

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tag: endocrine treated

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title: S000671

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: esr1 expression

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title: S000667

tag: scanb external id

tag: age at diagnosis

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tag: relapse free interval days

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title: S000666

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S000665

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tag: overall survival event

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title: S000674

tag: scanb external id

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title: S000664

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tag: relapse free interval days

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title: S000663

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tag: nhg

tag: overall survival days

tag: overall survival years


title: S000661

tag: scanb external id

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tag: histopathological type

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tag: relapse free interval event


title: S000685

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tag: esr1 expression

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title: S000659

tag: er status

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tag: relapse free interval days

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title: S000660

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tag: overall survival days

tag: overall survival years


title: S000654

tag: tumor size

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tag: overall survival event

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title: S000653

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title: S000657

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title: S000646

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title: S000649

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title: S000644

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title: S000647

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tag: relapse free interval days

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title: S000651

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tag: overall survival days

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title: S000639

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title: S000642

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title: S000652

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title: S000643

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tag: histopathological type

tag: overall survival days

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title: S000670

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title: S000634

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title: S000633

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tag: histopathological type

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title: S000636

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tag: overall survival years


title: S000662

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title: S000681

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title: S000629

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tag: relapse free interval days

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title: S000625

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tag: overall survival days

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title: S000621

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tag: histopathological type

tag: overall survival event

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title: S000627

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title: S000628

tag: er status

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tag: her2 status

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tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S000624

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tag: clinical groups

tag: histopathological type

tag: overall survival days

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title: S000620

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title: S000619

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title: S000618

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tag: histopathological type

tag: relapse free interval days

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title: S000641

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

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tag: overall survival days

tag: overall survival years


title: S000617

tag: er status

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tag: nhg

tag: overall survival event

tag: relapse free interval event


title: S000614

tag: scanb external id

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tag: clinical groups

tag: histopathological type

tag: esr1 expression

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title: S000622

tag: tumor size

tag: lymph node group

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tag: endocrine treated

tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S000611

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival days

tag: overall survival years


title: S000616

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival event

tag: relapse free interval event


title: S000635

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

tag: esr2 expression


title: S000606

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S000623

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival days

tag: overall survival years


title: S000608

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival event

tag: relapse free interval event


title: S000604

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: esr1 expression

tag: esr2 expression


title: S000632

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: relapse free interval days

tag: relapse free interval years


title: S000601

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S000598

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival event

tag: relapse free interval event


title: S000631

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: esr1 expression

tag: esr2 expression


title: S000613

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S000594

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival days

tag: overall survival years


title: S000592

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival event

tag: relapse free interval event


title: S000589

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

tag: esr2 expression


title: S000596

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S000593

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival days

tag: overall survival years


title: S000591

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival event

tag: relapse free interval event


title: S000587

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: esr1 expression

tag: esr2 expression


title: S000602

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: relapse free interval days

tag: relapse free interval years


title: S000584

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S000595

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival event

tag: relapse free interval event


title: S000603

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: esr1 expression

tag: esr2 expression


title: S000581

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S000586

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival days

tag: overall survival years


title: S000578

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival event

tag: relapse free interval event


title: S000577

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

tag: esr2 expression


title: S000575

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S000580

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival days

tag: overall survival years


title: S000572

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival event

tag: relapse free interval event


title: S000573

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: esr1 expression

tag: esr2 expression


title: S000574

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: relapse free interval days

tag: relapse free interval years


title: S000567

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S000597

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival event

tag: relapse free interval event


title: S000563

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: esr1 expression

tag: esr2 expression


title: S000569

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S000561

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival days

tag: overall survival years


title: S000570

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival event

tag: relapse free interval event


title: S000560

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

tag: esr2 expression


title: S000566

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S000558

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival days

tag: overall survival years


title: S000542

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival event

tag: relapse free interval event


title: S000557

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: esr1 expression

tag: esr2 expression


title: S000536

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: relapse free interval days

tag: relapse free interval years


title: S000535

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S000532

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival event

tag: relapse free interval event


title: S000549

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: esr1 expression

tag: esr2 expression


title: S000546

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S000538

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival days

tag: overall survival years


title: S000544

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival event

tag: relapse free interval event


title: S000521

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

tag: esr2 expression


title: S000522

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S000534

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival days

tag: overall survival years


title: S000548

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival event

tag: relapse free interval event


title: S000514

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: esr1 expression

tag: esr2 expression


title: S000533

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: relapse free interval days

tag: relapse free interval years


title: S000526

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S000517

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival event

tag: relapse free interval event


title: S000528

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: esr1 expression

tag: esr2 expression


title: S000523

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S000519

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival days

tag: overall survival years


title: S000530

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival event

tag: relapse free interval event


title: S000527

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

tag: esr2 expression


title: S000545

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S000512

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival days

tag: overall survival years


title: S000518

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival event

tag: relapse free interval event


title: S000510

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: esr1 expression

tag: esr2 expression


title: S000513

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: relapse free interval days

tag: relapse free interval years


title: S000516

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S000515

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival event

tag: relapse free interval event


title: S000504

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: esr1 expression

tag: esr2 expression


title: S000520

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S000500

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival days

tag: overall survival years


title: S000496

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival event

tag: relapse free interval event


title: S000501

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

tag: esr2 expression


title: S000499

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S000503

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival days

tag: overall survival years


title: S000498

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival event

tag: relapse free interval event


title: S000497

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: esr1 expression

tag: esr2 expression


title: S000488

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: relapse free interval days

tag: relapse free interval years


title: S000489

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S000478

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival event

tag: relapse free interval event


title: S000491

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: esr1 expression

tag: esr2 expression


title: S000494

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S000469

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival days

tag: overall survival years


title: S000471

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival event

tag: relapse free interval event


title: S000487

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

tag: esr2 expression


title: S000463

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S000485

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival days

tag: overall survival years


title: S000476

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival event

tag: relapse free interval event


title: S000474

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: esr1 expression

tag: esr2 expression


title: S000475

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: relapse free interval days

tag: relapse free interval years


title: S000458

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S000461

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival event

tag: relapse free interval event


title: S000456

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: esr1 expression

tag: esr2 expression


title: S000465

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S000495

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival days

tag: overall survival years


title: S000506

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival event

tag: relapse free interval event


title: S000449

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

tag: esr2 expression


title: S000439

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S000468

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival days

tag: overall survival years


title: S000452

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival event

tag: relapse free interval event


title: S000453

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: esr1 expression

tag: esr2 expression


title: S000435

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: relapse free interval days

tag: relapse free interval years


title: S000450

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival days

tag: overall survival years


title: S000427

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival event

tag: relapse free interval event


title: S000443

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: esr1 expression

tag: esr2 expression


title: S000416

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: relapse free interval days

tag: relapse free interval years


title: S000418

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: overall survival days

tag: overall survival years


title: S000454

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival event

tag: relapse free interval event


title: S000433

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: esr1 expression

tag: esr2 expression


title: S000442

tag: er status

tag: pgr status

tag: her2 status

tag: ki67 status

tag: nhg

tag: relapse free interval days

tag: relapse free interval years


title: S000472

tag: scanb external id

tag: age at diagnosis

tag: pam50 subtype

tag: clinical groups

tag: histopathological type

tag: overall survival days

tag: overall survival years


title: S000434

tag: tumor size

tag: lymph node group

tag: lymph node status

tag: endocrine treated

tag: chemo treated

tag: overall survival event

tag: relapse free interval event