title: Str_Glast_49 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_53 pH [scNOMe-seq]

status: Public on Sep 16 2022

type: SRA

city: Heidelberg

first: Ana

last: Martin-Villalba

address: Im Neuenheimer Feld 280

department: Molecular Neurobiology

country: Germany

institute: German Cancer Research Center

description: single-cell NOMe-seq

library_source: genomic

data_processing:
read trimming and adapter removal
Bisulfite-aware read mapping
quantification of CpG and GpC methylation
Assembly: GRCm38 (mm10)
Supplementary files format and content: .csv.gz files: cell x region methylation matrices in gzip-compressed csv (comma-separated values) format. acc: chromatin accessibility (=GpC methylation). meth: DNA (=CpG) methylation. VMR: variably methylated regions identified with the ‘scbs’ software. mfrac: fraction of methylated sites. shrunkResid: shrunken mean of residuals quantified with ‘scbs’.
Supplementary files format and content: .cov.gz files: gzip-compressed tab-separated files produced by Bismark with the following columns: chromosome, start position, end position, methylation percentage, number of methylated cytosines, number of unmethylated cytosines.
Library strategy: Single-cell NOMe-seq

molecule: genomic DNA

organism: Mus musculus

source_name: striatum & ventricular-subventricular zone

extract_protocol:
For the ischemia experiment, the vSVZ and striatum were isolated. For the naïve experiments, vSVZ, striatum, and olfactory bulb were isolated. Depending on the plate, individual or pooled mice were used to sort cells on plate. Tissues were processed and sorted in a BD FACSAria II at the DKFZ Flow Cytometry Facility. Cells were stained with the following antibodies (all conditions and tissues together): O4-APC and O4-APC-Vio770 (Miltenyi; diluted 1:50), Ter119-APC-Cy7 (Biolegend; 1:100), CD45-APC-Cy7 (BD; 1:200), GLAST (ACSA-1)-PE (Miltenyi: 1:20), PSA-NCAM-PE-Vio770 (Miltenyi; 1:75), Prominin1-A488 (eBioscience; 1:75), and Sytox Blue (Life Technologies, 1:1000), CD9-eFluo450 (eBioscience, 1:300).
For profiling the transcriptome and epigenome of single cells we developed and implemented a miniaturized and higher throughput version of the scNMT-seq protocol (Clark et al., 2018). On this new version, the Smart-seq3 (Hagemann-Jensen et al., 2020) method and specific normalization steps were implemented. A detailed version of the protocol is described in Cerrizuela et al., (2022). The samples listed here represent the epigenomic portion of this multi-omic data set, i.e. DNA methylation and chromatin accessibility assessed with single-cell NOMe-seq.

treatment_protocol: Two months old TiCY mice were intraperitoneally injected with tamoxifen. In these mice, tamoxifen-induced Cre recombination takes place in neural stem cells in the vSVZ, which express Tlx (Nr2e1) and will stably activate the production of enhanced YFP, labeling NSCs and their progeny. Two weeks after injection, an injury by bilateral carotid artery occlusion (BCCAO) was performed as described (Llorens-Bobadilla et al., 2015). The animals were sacrificed for single cell sorting either 48 h or 3 weeks after ischemia. WT mice were not subjected to tamoxifen or ischemia.

tag: tissue

tag: cell type

value: astrocytes and NSC lineage cells

tag: genotype

value: TiCY

tag: treatment

value: 21 days post ischemia


title: Str_Glast_5 pH [scNOMe-seq]

description: single-cell NOMe-seq

value: striatum & ventricular-subventricular zone


title: Str_Glast_41 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_55 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_32 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_33 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_36 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_51 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_214 pI

description: single-cell RNA-seq

library_source: transcriptomic single cell

data_processing:
mapping with STAR via zUMIs
transcript quantification with featureCounts via zUMIs
Assembly: GRCm38 (mm10)
Supplementary files format and content: Single-cell RNA-seq count matrix in gzip-compressed csv (comma-separated values) format. Values are not normalized, decimals are due to distribution of multimapping reads.

molecule: total RNA

extract_protocol:
For the ischemia experiment, the vSVZ and striatum were isolated. For the naïve experiments, vSVZ, striatum, and olfactory bulb were isolated. Depending on the plate, individual or pooled mice were used to sort cells on plate. Tissues were processed and sorted in a BD FACSAria II at the DKFZ Flow Cytometry Facility. Cells were stained with the following antibodies (all conditions and tissues together): O4-APC and O4-APC-Vio770 (Miltenyi; diluted 1:50), Ter119-APC-Cy7 (Biolegend; 1:100), CD45-APC-Cy7 (BD; 1:200), GLAST (ACSA-1)-PE (Miltenyi: 1:20), PSA-NCAM-PE-Vio770 (Miltenyi; 1:75), Prominin1-A488 (eBioscience; 1:75), and Sytox Blue (Life Technologies, 1:1000), CD9-eFluo450 (eBioscience, 1:300).
For profiling the transcriptome and epigenome of single cells we developed and implemented a miniaturized and higher throughput version of the scNMT-seq protocol (Clark et al., 2018). On this new version, the Smart-seq3 (Hagemann-Jensen et al., 2020) method and specific normalization steps were implemented. A detailed version of the protocol is described in Cerrizuela et al., (2022). The samples listed here represent the transcriptomic portion of this multi-omic data set.
Single-cell RNA-seq (Smart-seq3)

value: 2 days post ischemia


title: Str_Glast_229 pI

description: single-cell RNA-seq


title: Str_Glast_217 pI

description: single-cell RNA-seq


title: Str_Glast_215 pI

description: single-cell RNA-seq


title: Str_Glast_216 pI

description: single-cell RNA-seq


title: Str_Glast_222 pI

description: single-cell RNA-seq


title: Str_Glast_224 pI

description: single-cell RNA-seq


title: Str_Glast_219 pI

description: single-cell RNA-seq


title: Str_Glast_228 pI

description: single-cell RNA-seq


title: Str_Glast_218 pI

description: single-cell RNA-seq


title: Str_Glast_212 pI

description: single-cell RNA-seq


title: Str_Glast_22 pI

description: single-cell RNA-seq


title: Str_Glast_29 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_3 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_28 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_31 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_196 pI

description: single-cell RNA-seq


title: Str_Glast_200 pI

description: single-cell RNA-seq


title: Str_Glast_2 pI

description: single-cell RNA-seq


title: Str_Glast_198 pI

description: single-cell RNA-seq


title: Str_Glast_199 pI

description: single-cell RNA-seq


title: Str_Glast_206 pI

description: single-cell RNA-seq


title: Str_Glast_201 pI

description: single-cell RNA-seq


title: Str_Glast_211 pI

description: single-cell RNA-seq


title: Str_Glast_209 pI

description: single-cell RNA-seq


title: Str_Glast_210 pI

description: single-cell RNA-seq


title: Str_Glast_202 pI

description: single-cell RNA-seq


title: Str_Glast_207 pI

description: single-cell RNA-seq


title: Str_Glast_192 pI

description: single-cell RNA-seq


title: Str_Glast_194 pI

description: single-cell RNA-seq


title: Str_Glast_25 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_27 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_191 pI

description: single-cell RNA-seq


title: Str_Glast_19 pI

description: single-cell RNA-seq


title: Str_Glast_2 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_20 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_24 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_21 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_23 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_22 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_180 pI

description: single-cell RNA-seq


title: Str_Glast_169 pI

description: single-cell RNA-seq


title: Str_Glast_176 pI

description: single-cell RNA-seq


title: Str_Glast_187 pI

description: single-cell RNA-seq


title: Str_Glast_186 pI

description: single-cell RNA-seq


title: Str_Glast_179 pI

description: single-cell RNA-seq


title: Str_Glast_189 pI

description: single-cell RNA-seq


title: Str_Glast_184 pI

description: single-cell RNA-seq


title: Str_Glast_183 pI

description: single-cell RNA-seq


title: Str_Glast_168 pI

description: single-cell RNA-seq


title: Str_Glast_165 pI

description: single-cell RNA-seq


title: Str_Glast_166 pI

description: single-cell RNA-seq


title: Str_Glast_159 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_173 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_171 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_163 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_172 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_154 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_175 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_160 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_167 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_157 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_169 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_18 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_161 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_174 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_152 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_162 pI

description: single-cell RNA-seq


title: Str_Glast_16 pI

description: single-cell RNA-seq


title: Str_Glast_150 pI

description: single-cell RNA-seq


title: Str_Glast_159 pI

description: single-cell RNA-seq


title: Str_Glast_148 pI

description: single-cell RNA-seq


title: Str_Glast_146 pI

description: single-cell RNA-seq


title: Str_Glast_141 pI

description: single-cell RNA-seq


title: Str_Glast_143 pI

description: single-cell RNA-seq


title: Str_Glast_15 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_142 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_147 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_144 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_151 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_149 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_150 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_143 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_148 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_135 pI

description: single-cell RNA-seq


title: Str_Glast_138 pI

description: single-cell RNA-seq


title: Str_Glast_137 pI

description: single-cell RNA-seq


title: Str_Glast_140 pI

description: single-cell RNA-seq


title: Str_Glast_131 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_14 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_141 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_134 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_140 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_135 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_136 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_133 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_139 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_130 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_129 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_13 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_123 pI

description: single-cell RNA-seq


title: Str_Glast_126 pI

description: single-cell RNA-seq


title: Str_Glast_118 pI

description: single-cell RNA-seq


title: Str_Glast_132 pI

description: single-cell RNA-seq


title: Str_Glast_120 pI

description: single-cell RNA-seq


title: Str_Glast_127 pI

description: single-cell RNA-seq


title: Str_Glast_131 pI

description: single-cell RNA-seq


title: Str_Glast_133 pI

description: single-cell RNA-seq


title: Str_Glast_128 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_124 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_123 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: SVZ_Olig_6 pH

description: single-cell RNA-seq


title: SVZ_Olig_4 pH

description: single-cell RNA-seq


title: SVZ_Olig_5 pH

description: single-cell RNA-seq


title: SVZ_Olig_3 pH

description: single-cell RNA-seq


title: SVZ_Olig_15 pH

description: single-cell RNA-seq


title: Str_Glast_116 pI

description: single-cell RNA-seq


title: Str_Glast_109 pI

description: single-cell RNA-seq


title: Str_Glast_105 pI

description: single-cell RNA-seq


title: Str_Glast_103 pI

description: single-cell RNA-seq


title: Str_Glast_107 pI

description: single-cell RNA-seq


title: Str_Glast_115 pI

description: single-cell RNA-seq


title: Str_Glast_108 pI

description: single-cell RNA-seq


title: SVZ_Olig_9 pH

description: single-cell RNA-seq


title: Str_Glast_106 pI

description: single-cell RNA-seq


title: Str_Glast_112 pI

description: single-cell RNA-seq


title: SVZ_Olig_16 pH

description: single-cell RNA-seq


title: Str_Glast_122 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_120 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_116 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_117 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_119 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_12 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: SVZ_Olig_13 pH

description: single-cell RNA-seq


title: SVZ_Olig_14 pH

description: single-cell RNA-seq


title: SVZ_Olig_10 pH

description: single-cell RNA-seq


title: SVZ_Olig_11 pH

description: single-cell RNA-seq


title: SVZ_Glast_99 pH

description: single-cell RNA-seq


title: SVZ_Glast_98 pH

description: single-cell RNA-seq


title: SVZ_Glast_94 pH

description: single-cell RNA-seq


title: SVZ_Glast_90 pH

description: single-cell RNA-seq


title: SVZ_Glast_93 pH

description: single-cell RNA-seq


title: SVZ_Glast_9 pH

description: single-cell RNA-seq


title: OB99 pF [scNOMe-seq]

description: single-cell NOMe-seq

source_name: olfactory bulb & late RMS

value: olfactory bulb & late RMS

value: neuroblast/neuron (OB)

value: WT

value: naive


title: Str_Glast_100 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_114 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_107 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_108 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_104 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_111 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_112 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_106 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_105 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_103 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: OB95 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_11 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_115 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_10 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_1 pH [scNOMe-seq]

description: single-cell NOMe-seq


title: SVZ_Glast_97 pH

description: single-cell RNA-seq


title: OB79 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB78 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB93 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: SVZ_Glast_91 pH

description: single-cell RNA-seq


title: SVZ_Glast_77 pH

description: single-cell RNA-seq


title: SVZ_Glast_85 pH

description: single-cell RNA-seq


title: SVZ_Glast_79 pH

description: single-cell RNA-seq


title: SVZ_Glast_88 pH

description: single-cell RNA-seq


title: SVZ_Glast_84 pH

description: single-cell RNA-seq


title: SVZ_Glast_78 pH

description: single-cell RNA-seq


title: SVZ_Glast_89 pH

description: single-cell RNA-seq


title: SVZ_Glast_82 pH

description: single-cell RNA-seq


title: SVZ_Glast_86 pH

description: single-cell RNA-seq


title: SVZ_Glast_76 pH

description: single-cell RNA-seq


title: SVZ_Glast_74 pH

description: single-cell RNA-seq


title: SVZ_Glast_75 pH

description: single-cell RNA-seq


title: SVZ_Glast_81 pH

description: single-cell RNA-seq


title: SVZ_Glast_87 pH

description: single-cell RNA-seq


title: OB691 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB77 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB720 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB648 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB645 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB646 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB66 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB668 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB64 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB65 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB667 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB623 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB624 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB58 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB61 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: SVZ_Glast_73 pH

description: single-cell RNA-seq


title: SVZ_Glast_72 pH

description: single-cell RNA-seq


title: SVZ_Glast_68 pH

description: single-cell RNA-seq


title: SVZ_Glast_7 pH

description: single-cell RNA-seq


title: SVZ_Glast_66 pH

description: single-cell RNA-seq


title: OB74 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: SVZ_Glast_63 pH

description: single-cell RNA-seq


title: SVZ_Glast_56 pH

description: single-cell RNA-seq


title: SVZ_Glast_59 pH

description: single-cell RNA-seq


title: SVZ_Glast_62 pH

description: single-cell RNA-seq


title: SVZ_Glast_60 pH

description: single-cell RNA-seq


title: SVZ_Glast_64 pH

description: single-cell RNA-seq


title: SVZ_Glast_61 pH

description: single-cell RNA-seq


title: SVZ_Glast_65 pH

description: single-cell RNA-seq


title: SVZ_Glast_6 pH

description: single-cell RNA-seq


title: SVZ_Glast_55 pH

description: single-cell RNA-seq


title: SVZ_Glast_58 pH

description: single-cell RNA-seq


title: SVZ_Glast_71 pH

description: single-cell RNA-seq


title: SVZ_Glast_69 pH

description: single-cell RNA-seq


title: OB552 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB52 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB34 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB57 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB48 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB548 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB550 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB56 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: SVZ_Glast_53 pH

description: single-cell RNA-seq


title: SVZ_Glast_51 pH

description: single-cell RNA-seq


title: SVZ_Glast_50 pH

description: single-cell RNA-seq


title: SVZ_Glast_54 pH

description: single-cell RNA-seq


title: SVZ_Glast_5 pH

description: single-cell RNA-seq


title: SVZ_Glast_49 pH

description: single-cell RNA-seq


title: SVZ_Glast_48 pH

description: single-cell RNA-seq


title: SVZ_Glast_45 pH

description: single-cell RNA-seq


title: OB201 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB173 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB163 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB193 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB180 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB214 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: SVZ_Glast_44 pH

description: single-cell RNA-seq


title: OB192 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB225 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB153 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: SVZ_Glast_43 pH

description: single-cell RNA-seq


title: OB185 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB30 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB27 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB174 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB29 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB148 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB145 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB204 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB130 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: SVZ_Glast_42 pH

description: single-cell RNA-seq


title: OB129 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB128 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB161 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: SVZ_Glast_40 pH

description: single-cell RNA-seq


title: OB131 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB118 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB116 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: OB103 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: SVZ_Glast_37 pH

description: single-cell RNA-seq


title: OB102 pF [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST94 pD [scNOMe-seq]

description: single-cell NOMe-seq

source_name: ventricular-subventricular zone

value: ventricular-subventricular zone


title: Nbs1-iKO rep1

city: Jena

first: Marco

last: Groth

address: Beutenbergstraße 11

department: Core Facility - Next Generation Sequencing

institute: Leibniz Institute on Aging - FLI

description:
counts_RPMs_RPKMs.xls
ZW2165

library_source: transcriptomic

data_processing:
Reads were extracted in FastQ format using Illumina’s CASAVA v1.8.2.
The reads were mapped to the mouse reference genome (GRCm38) with the Ensembl gene annotation (release 92) with TopHat2 v2.1.0 (parameters: --no-coverage-search -x 1 -g 1).
All reads mapped to an Ensembl gene were counted using FeatureCounts v1.5.0.
Genome_build: GRCm38
Supplementary_files_format_and_content: xls file containing reads counts, RPMs and RPKMs per gene of all samples

source_name: ~200mg of left lateral lobe of the liver

extract_protocol:
A piece of liver (~200mg) was taken from the left lateral lobe and total RNA was isolated by using Tri Reagent (T9424, Sigma-Aldrich, Munich, Germany)
Preparation of libraries was done using Illumina’s TruSeq RNA v2 kit following the manufacturer’s instruction.

treatment_protocol: Animals were sacrifed 3 days post five consecutive days of Tamoxifen injection (1mg/25g body) and liver samples were collected from the left lateral lobe.

tag: strain

value: liver

tag: Sex

value: female

tag: age

value: 3 months

value: Nbs1 fl/fl; Rosa26-CreERT2 tg;

tag: date of birth

tag: date of death


title: Nbs1-iKO rep2

description:
counts_RPMs_RPKMs.xls
ZW2166


title: Nbs1-iKO rep3

description:
counts_RPMs_RPKMs.xls
ZW2167


title: GLAST88 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST87 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: aNSC


title: SVZ_Glast_32 pH

description: single-cell RNA-seq


title: SVZ_Glast_35 pH

description: single-cell RNA-seq


title: SVZ_Glast_3 pH

description: single-cell RNA-seq


title: SVZ_Glast_30 pH

description: single-cell RNA-seq


title: SVZ_Glast_31 pH

description: single-cell RNA-seq


title: GLAST86 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: SVZ_Glast_29 pH

description: single-cell RNA-seq


title: SVZ_Glast_28 pH

description: single-cell RNA-seq


title: GLAST85 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: Ctr rep2

description:
counts_RPMs_RPKMs.xls
ZW2163

value: Nbs1 f/+; Rosa26-CreERT2 tg


title: GLAST84 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: SVZ_Glast_36 pH

description: single-cell RNA-seq


title: GLAST9 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST83 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: Ctr rep1

description:
counts_RPMs_RPKMs.xls
ZW2162


title: SVZ_Glast_41 pH

description: single-cell RNA-seq


title: SVZ_Glast_25 pH

description: single-cell RNA-seq


title: SVZ_Glast_38 pH

description: single-cell RNA-seq


title: Adult donor1

city: Hamburg

first: Immo

last: Prinz

address: Falkenried 94

department: Institute of Systems Immunology

institute: University medical center Hamburg Eppendorf

description: Vdelta2 TCR

data_processing:
Raw reads alignment annotation was performed with MiXCR  v.2.1.12 to international immunogenetics information system (IMGT) reference .
Unproductive TCRs were filtered out.
Annotated TCRs were further counted and summarized by VDJtools (https://github.com/mikessh/vdjtools.git).
Assembly: international immunogenetics information system (IMGT) reference
Supplementary files format and content: VDJtools output that contains the CDR3 sequence, VDJ combination, and frequencies of TCRs.
Supplementary files format and content: Each processed file is the Vdelta2 TCR repertoire from one donor.
Library strategy: VDJ-seq

organism: Homo sapiens

source_name: PBMC

extract_protocol:
FACS sorting was performed using the FACS Aria Fusion flow cytometer (BD, USA). Freshly isolated peripheral blood mononuclear cells (PBMC) and
cord blood mononuclear cells (CBMC) were incubated with 5% Fc-receptor block before staining. The following antibodies were used:
anti-CD3 (clone REA613; Miltenyi Biotec), anti-CD3 (clone SK7; BD Bioscience), anti-γδ TCR (clone
11F2, BD Bioscience or Miltenyi Biotec), anti-Vγ9 (clone IMMU 360; Beckman Coulter), anti-Vδ2
(clone 123R3; Miltenyi Biotec). RNA was extracted from sorted DAPI─CD3+γδ+Vγ9+Vδ2+
cells from PBMC or CMBC by RNAeasy Micro Kit (Qiagen). Reverse transcription was done with
Superscript III reverse transcriptase (Invitrogen) and oligo(dT) primers.
TCRδ chains was amplified via TRDV2 specific primers hTRDV2: ATTGCAAAGAACCTGGCTGT and
hTRDC: GACAAAAACGGATGGTTTGG. The PCR program was set as follows:
1). 95°C for 3 min;
2). 95°C, 63°C, and 72°C for 30s each, for 5 cycles;
3). 95 °C for 30s, 72°C for 35s, for 20–25 cycles;
4). 72°C for 4 min.
The amplified cDNA library with Illumina P5 and P7 adaptor was sequenced by Illumina Miseq using
500 cycles of paired-end sequencing.

tag: individual

value: Adult donor1

tag: developmental stage

value: Adult

value: PBMC

tag: cell type (sorted)

value: Vgamma9Vdelta2 T cells


title: Adult donor2

description: Vdelta2 TCR

value: Adult donor2


title: SVZ_Glast_23 pH

description: single-cell RNA-seq

value: striatum & ventricular-subventricular zone

value: astrocytes and NSC lineage cells

value: TiCY

value: 21 days post ischemia


title: Neonatal donor5

description: Vdelta2 TCR

source_name: CBMC

value: Neonatal donor5

value: Neonate

value: CBMC


title: Neonatal donor4

description: Vdelta2 TCR

value: Neonatal donor4


title: Ctr rep3

description:
counts_RPMs_RPKMs.xls
ZW2164

value: liver

value: female

value: 3 months


title: SVZ_Glast_22 pH

description: single-cell RNA-seq


title: GLAST80 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: ventricular-subventricular zone

value: TAP

value: WT

value: naive


title: Neonatal donor3

description: Vdelta2 TCR

value: Neonatal donor3

value: Vgamma9Vdelta2 T cells


title: SVZ_Glast_27 pH

description: single-cell RNA-seq

value: striatum & ventricular-subventricular zone


title: GLAST8 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-ZAB4-0001-SM-GW24D

type: genomic

city: Chicago

first: Meritxell

last: Oliva

state: Illinois

address: 5841 S. Maryland Ave

department: Public Health Sciences

country: USA

institute: University of Chicago

description:
sample name:
GTEX-ZAB4-0001-SM-GW24D

hyb_protocol: All samples were  prepared and analyzed in accordance with the manufacturer guidelines and protocol for the Illumina Infinium HumanMethylationEPIC array (Illumina, San Diego, CA, USA). That is, bisulphite converted DNA was amplified, fragmented and hybridised to IIllumina Infinium HumanMethylationEPIC BeadChip using standard Illumina protocol

scan_protocol: Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting

data_processing:
Raw DNAm data was processed with ChAMP software. For sample quality control (QC), we excluded (1) 3 samples with undetectable or missing methylation values (detection P > 0.01) in ≥ 5% of CpGs and (2) 6 samples with mismatched sex. For CpG QC, we excluded (1) CpGs that had detection P > 0.01 in ≥ 1 samples (N = 44,135) and that had a beadcount < 3 in ≥ 5% samples (N = 660), (2) cross-reactive CpGs (N = 40,812), (3) variant-overlapping CpGs or within a single base pair extension (N = 7,708) and (4) CpGs mapping to sex chromosomes. For filters (2) and (3), we selected CpG probes overlapping variants defined at MAF > 5% in 1000G. A total of 754,054 CpGs passed QC, could be mapped and lifted over from GRCh37 to GRCh38 human genome build and were retained for further analysis. Raw DNAm values were background-adjusted using the single sample normal-exponential out-of-band (ssnoob) method with dye bias correction. DNAm β values were normalized using the beta mixture quantile (BMIQ) method, adjusting for type I/II probe bias; output β values for each CpG were used in downstream analysis. After normalization, we removed one additional sample with array-derived genotype profile not matching the WGS-derived one. Principal component analysis (PCA) was conducted on DNAm β values within each tissue type, and 3 samples were removed for being outliers with respect to the top 5 principal components (PCs) of the corresponding tissue. A total of 987 samples passed final QC and were retained for further analysis.
Processed data file contains: Normalized Average Beta

label: Cy5 and Cy3

source_name: Whole Blood

label_protocol: Standard Illumina Protocol

extract_protocol: DNA samples were extracted from GTEx tissue samples using Qiagen Gentra Puregene method at GTEx Laboratory Data, Analysis and Coordinating Center (LDACC), and sent to the Institute for Population and Precision Health Laboratory on 96-well plates. Tissue types were not batched by plate. Bisulfite conversion was applied to 500 ng of DNA using EZ-96 DNA methylation kit (Zymo Research, Irvine, CA, USA).

value: Whole Blood

value: Current


title: GLAST98 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: aNSC


title: GTEX-YFCO-0001-SM-GW29R

description:
sample name:
GTEX-YFCO-0001-SM-GW29R

value: PT-YFCO

value: GTEX-YFCO

value: Never


title: GLAST78 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: Neonatal donor1

description: Vdelta2 TCR

value: Neonatal donor1

value: Neonate

value: CBMC


title: Neonatal donor2

description: Vdelta2 TCR

value: Neonatal donor2


title: GTEX-YFC4-0001-SM-GW1YL

description:
sample name:
GTEX-YFC4-0001-SM-GW1YL


title: GTEX-XPT6-0004-SM-GW1DN

description:
sample name:
GTEX-XPT6-0004-SM-GW1DN


title: GLAST76 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: ventricular-subventricular zone


title: GTEX-XMK1-0003-SM-GW2B7

description:
sample name:
GTEX-XMK1-0003-SM-GW2B7


title: GTEX-X5EB-0001-SM-GW17Y

description:
sample name:
GTEX-X5EB-0001-SM-GW17Y


title: SVZ_Glast_20 pH

description: single-cell RNA-seq

value: astrocytes and NSC lineage cells

value: TiCY

value: 21 days post ischemia


title: SVZ_Glast_39 pH

description: single-cell RNA-seq


title: SVZ_Glast_2 pH

description: single-cell RNA-seq


title: GLAST75 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: TAP

value: WT

value: naive


title: SVZ_Glast_191 pH

description: single-cell RNA-seq

value: striatum & ventricular-subventricular zone


title: GTEX-X585-0003-SM-GW17P

description:
sample name:
GTEX-X585-0003-SM-GW17P

value: Whole Blood

value: Former


title: GLAST74 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: aNSC


title: SVZ_Glast_21 pH

description: single-cell RNA-seq


title: GTEX-X4XX-0004-SM-GW17N

description:
sample name:
GTEX-X4XX-0004-SM-GW17N

value: Current


title: GTEX-X4EP-0002-SM-GW17R

description:
sample name:
GTEX-X4EP-0002-SM-GW17R

value: Never


title: GTEX-X261-0002-SM-GW17B

description:
sample name:
GTEX-X261-0002-SM-GW17B


title: GTEX-WWYW-0004-SM-GW17Q

description:
sample name:
GTEX-WWYW-0004-SM-GW17Q

value: PT-WWYW

value: GTEX-WWYW


title: SVZ_Glast_190 pH

description: single-cell RNA-seq


title: SVZ_Glast_19 pH

description: single-cell RNA-seq


title: GTEX-WH7G-0004-SM-GW17G

description:
sample name:
GTEX-WH7G-0004-SM-GW17G


title: GLAST70 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-WRHU-0003-SM-GW18B

description:
sample name:
GTEX-WRHU-0003-SM-GW18B

value: PT-WRHU

value: GTEX-WRHU


title: GTEX-U3ZM-0004-SM-GW1C4

description:
sample name:
GTEX-U3ZM-0004-SM-GW1C4


title: GLAST71 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: ventricular-subventricular zone


title: GTEX-U8XE-0004-SM-GW1FI

description:
sample name:
GTEX-U8XE-0004-SM-GW1FI


title: GLAST72 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: SVZ_Glast_189 pH

description: single-cell RNA-seq

value: astrocytes and NSC lineage cells


title: GTEX-WFG8-0004-SM-GW21G

description:
sample name:
GTEX-WFG8-0004-SM-GW21G


title: GTEX-U3ZH-0003-SM-GW1FM

description:
sample name:
GTEX-U3ZH-0003-SM-GW1FM


title: SVZ_Glast_187 pH

description: single-cell RNA-seq

value: TiCY


title: GLAST7 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: neuroblast


title: GTEX-SNOS-0004-SM-GW1FF

description:
sample name:
GTEX-SNOS-0004-SM-GW1FF

value: PT-SNOS

value: GTEX-SNOS


title: GLAST81 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: TAP

value: WT

value: naive


title: GTEX-1J1R8-0004-SM-GW22Y

description:
sample name:
GTEX-1J1R8-0004-SM-GW22Y

value: Whole Blood


title: SVZ_Glast_186 pH

description: single-cell RNA-seq

value: striatum & ventricular-subventricular zone

value: 21 days post ischemia


title: GLAST68 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: aNSC


title: GTEX-1I6K6-0004-SM-GW1DL

description:
sample name:
GTEX-1I6K6-0004-SM-GW1DL

value: Former


title: GLAST69 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-1H3VE-0001-SM-GW18P

description:
sample name:
GTEX-1H3VE-0001-SM-GW18P

value: Current


title: SVZ_Glast_185 pH

description: single-cell RNA-seq


title: GTEX-1H1ZS-0002-SM-GW1AK

description:
sample name:
GTEX-1H1ZS-0002-SM-GW1AK


title: GLAST66 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: SVZ_Glast_188 pH

description: single-cell RNA-seq


title: GTEX-1GMR3-0001-SM-GW1BQ

description:
sample name:
GTEX-1GMR3-0001-SM-GW1BQ


title: GTEX-1CAMQ-0003-SM-GW1ZX

description:
sample name:
GTEX-1CAMQ-0003-SM-GW1ZX


title: GTEX-1C64N-0003-SM-GW1CV

description:
sample name:
GTEX-1C64N-0003-SM-GW1CV


title: GLAST64 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-1B98T-0003-SM-GW1CR

description:
sample name:
GTEX-1B98T-0003-SM-GW1CR


title: GLAST6 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST59 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-1A3MV-0002-SM-GW17U

description:
sample name:
GTEX-1A3MV-0002-SM-GW17U


title: SVZ_Glast_182 pH

description: single-cell RNA-seq


title: SVZ_Glast_181 pH

description: single-cell RNA-seq


title: GTEX-15EU6-0003-SM-GW17V

description:
sample name:
GTEX-15EU6-0003-SM-GW17V


title: GLAST58 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: SVZ_Glast_180 pH

description: single-cell RNA-seq


title: GTEX-15DDE-0001-SM-GW17D

description:
sample name:
GTEX-15DDE-0001-SM-GW17D


title: GTEX-15D1Q-0004-SM-GW17J

description:
sample name:
GTEX-15D1Q-0004-SM-GW17J


title: GTEX-15CHQ-0002-SM-GW21D

description:
sample name:
GTEX-15CHQ-0002-SM-GW21D


title: SVZ_Glast_179 pH

description: single-cell RNA-seq


title: SVZ_Glast_184 pH

description: single-cell RNA-seq


title: GLAST56 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-1GTWX-0001-SM-GW1GR

description:
sample name:
GTEX-1GTWX-0001-SM-GW1GR


title: GTEX-14E6D-0002-SM-GW17I

description:
sample name:
GTEX-14E6D-0002-SM-GW17I


title: SVZ_Glast_178 pH

description: single-cell RNA-seq


title: GLAST57 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: SVZ_Glast_183 pH

description: single-cell RNA-seq


title: GTEX-14C39-0004-SM-GW17K

description:
sample name:
GTEX-14C39-0004-SM-GW17K

value: Never


title: GTEX-14A6H-0003-SM-GW21E

description:
sample name:
GTEX-14A6H-0003-SM-GW21E


title: GTEX-15SHU-0001-SM-GW17T

description:
sample name:
GTEX-15SHU-0001-SM-GW17T


title: GLAST54 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: SVZ_Glast_177 pH

description: single-cell RNA-seq


title: GTEX-13SLX-0003-SM-GW18M

description:
sample name:
GTEX-13SLX-0003-SM-GW18M


title: SVZ_Glast_176 pH

description: single-cell RNA-seq


title: GTEX-13QIC-0004-SM-GW2BL

description:
sample name:
GTEX-13QIC-0004-SM-GW2BL


title: SVZ_Glast_175 pH

description: single-cell RNA-seq


title: SVZ_Glast_170 pH

description: single-cell RNA-seq


title: SVZ_Glast_169 pH

description: single-cell RNA-seq


title: SVZ_Glast_17 pH

description: single-cell RNA-seq


title: SVZ_Glast_172 pH

description: single-cell RNA-seq


title: GTEX-13OW5-0003-SM-GW2B3

description:
sample name:
GTEX-13OW5-0003-SM-GW2B3


title: GTEX-13NYS-0003-SM-GW1FJ

description:
sample name:
GTEX-13NYS-0003-SM-GW1FJ


title: GTEX-13NZA-0003-SM-GW1F3

description:
sample name:
GTEX-13NZA-0003-SM-GW1F3


title: GLAST52 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST53 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-12KS4-0003-SM-GW1BP

description:
sample name:
GTEX-12KS4-0003-SM-GW1BP


title: GTEX-12ZZW-0003-SM-GW18R

description:
sample name:
GTEX-12ZZW-0003-SM-GW18R


title: GTEX-12WSE-0002-SM-GW19L

description:
sample name:
GTEX-12WSE-0002-SM-GW19L


title: GTEX-12WSI-0004-SM-GW2CP

description:
sample name:
GTEX-12WSI-0004-SM-GW2CP


title: GTEX-12ZZY-0004-SM-GW19K

description:
sample name:
GTEX-12ZZY-0004-SM-GW19K


title: GTEX-12WSA-0001-SM-GW187

description:
sample name:
GTEX-12WSA-0001-SM-GW187


title: GTEX-11ZU8-0002-SM-GW18V

description:
sample name:
GTEX-11ZU8-0002-SM-GW18V


title: GTEX-11EMC-0004-SM-GW1YF

description:
sample name:
GTEX-11EMC-0004-SM-GW1YF


title: GLAST43 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST40 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST51 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST4 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-11TT1-0001-SM-GW21F

description:
sample name:
GTEX-11TT1-0001-SM-GW21F


title: GLAST49 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-11ZUS-0003-SM-GW1V6

description:
sample name:
GTEX-11ZUS-0003-SM-GW1V6


title: GTEX-139YR-0004-SM-GW1DM

description:
sample name:
GTEX-139YR-0004-SM-GW1DM


title: GLAST5 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: SVZ_Glast_167 pH

description: single-cell RNA-seq


title: SVZ_Glast_168 pH

description: single-cell RNA-seq


title: SVZ_Glast_166 pH

description: single-cell RNA-seq


title: Adult donor3

description: Vdelta2 TCR

value: Adult donor3

value: Adult

value: PBMC

value: Vgamma9Vdelta2 T cells


title: SVZ_Glast_162 pH

description: single-cell RNA-seq

value: astrocytes and NSC lineage cells

value: TiCY


title: GLAST381 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: ventricular-subventricular zone


title: SVZ_Glast_165 pH

description: single-cell RNA-seq


title: SVZ_Glast_164 pH

description: single-cell RNA-seq


title: GLAST38 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: TAP


title: GLAST380 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: WT


title: GLAST39 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: naive


title: SVZ_Glast_161 pH

description: single-cell RNA-seq


title: GLAST379 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: neuroblast


title: GLAST377 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: SVZ_Glast_163 pH

description: single-cell RNA-seq

value: striatum & ventricular-subventricular zone


title: GLAST378 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST376 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-T8EM-0126-SM-GW23L

description:
sample name:
GTEX-T8EM-0126-SM-GW23L

source_name: Testis

value: Moderate

value: Testis


title: GTEX-117YW-0003-SM-GW185

description:
sample name:
GTEX-117YW-0003-SM-GW185

value: Whole Blood

value: Former


title: GTEX-X62O-0326-SM-GW228

description:
sample name:
GTEX-X62O-0326-SM-GW228

value: Severe


title: GTEX-SNOS-1126-SM-GW1TU

description:
sample name:
GTEX-SNOS-1126-SM-GW1TU

value: PT-SNOS

value: GTEX-SNOS

value: Mild

value: Never


title: GTEX-X261-2326-SM-GW24K

description:
sample name:
GTEX-X261-2326-SM-GW24K

value: Current


title: GTEX-WOFL-0526-SM-GW221

description:
sample name:
GTEX-WOFL-0526-SM-GW221

value: PT-WOFL

value: GTEX-WOFL


title: SVZ_Glast_160 pH

description: single-cell RNA-seq

value: astrocytes and NSC lineage cells

value: TiCY

value: 21 days post ischemia


title: GTEX-U3ZH-1526-SM-GW1YW

description:
sample name:
GTEX-U3ZH-1526-SM-GW1YW


title: GTEX-X585-0126-SM-GW1EZ

description:
sample name:
GTEX-X585-0126-SM-GW1EZ


title: GTEX-X4XX-0726-SM-GW1CG

description:
sample name:
GTEX-X4XX-0726-SM-GW1CG


title: GTEX-11DYG-0004-SM-GW225

description:
sample name:
GTEX-11DYG-0004-SM-GW225


title: SVZ_Glast_158 pH

description: single-cell RNA-seq


title: SVZ_Glast_159 pH

description: single-cell RNA-seq


title: GTEX-S33H-0126-SM-GW1ZW

description:
sample name:
GTEX-S33H-0126-SM-GW1ZW


title: GTEX-1GL5R-0826-SM-GW1H2

description:
sample name:
GTEX-1GL5R-0826-SM-GW1H2


title: GTEX-1GTWX-2226-SM-GW16F

description:
sample name:
GTEX-1GTWX-2226-SM-GW16F


title: GTEX-SIU8-2326-SM-GW1FW

description:
sample name:
GTEX-SIU8-2326-SM-GW1FW


title: GTEX-1F6IF-0526-SM-GW1C5

description:
sample name:
GTEX-1F6IF-0526-SM-GW1C5


title: GTEX-1H1ZS-2826-SM-GW1VE

description:
sample name:
GTEX-1H1ZS-2826-SM-GW1VE


title: GLAST375 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: ventricular-subventricular zone

value: aNSC

value: WT

value: naive


title: GLAST373 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-1CAMQ-2326-SM-GW21R

description:
sample name:
GTEX-1CAMQ-2326-SM-GW21R

value: Testis


title: GTEX-1C64N-2826-SM-GW21K

description:
sample name:
GTEX-1C64N-2826-SM-GW21K

value: Moderate


title: GTEX-1F5PK-1226-SM-GW1V3

description:
sample name:
GTEX-1F5PK-1226-SM-GW1V3

value: Former


title: GTEX-1B98T-0626-SM-GW21S

description:
sample name:
GTEX-1B98T-0626-SM-GW21S


title: GLAST374 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: neuroblast


title: GLAST371 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: SVZ_Glast_156 pH

description: single-cell RNA-seq

value: striatum & ventricular-subventricular zone


title: SVZ_Glast_157 pH

description: single-cell RNA-seq


title: SVZ_Glast_154 pH

description: single-cell RNA-seq


title: SVZ_Glast_155 pH

description: single-cell RNA-seq


title: GTEX-1A3MV-0726-SM-GW1V4

description:
sample name:
GTEX-1A3MV-0726-SM-GW1V4

value: Mild


title: GTEX-15EU6-2326-SM-GW16L

description:
sample name:
GTEX-15EU6-2326-SM-GW16L


title: GTEX-148VJ-2526-SM-GW1VF

description:
sample name:
GTEX-148VJ-2526-SM-GW1VF


title: GTEX-15G1A-1526-SM-GW21L

description:
sample name:
GTEX-15G1A-1526-SM-GW21L


title: GTEX-18465-1526-SM-GW1GT

description:
sample name:
GTEX-18465-1526-SM-GW1GT


title: GTEX-15D1Q-2326-SM-GW21J

description:
sample name:
GTEX-15D1Q-2326-SM-GW21J


title: GTEX-147GR-0626-SM-GW1CU

description:
sample name:
GTEX-147GR-0626-SM-GW1CU


title: GTEX-15CHQ-2726-SM-GW1VK

description:
sample name:
GTEX-15CHQ-2726-SM-GW1VK


title: GTEX-14C39-0526-SM-GW16B

description:
sample name:
GTEX-14C39-0526-SM-GW16B

value: Never


title: GTEX-14E6D-1226-SM-GW1CS

description:
sample name:
GTEX-14E6D-1226-SM-GW1CS


title: SVZ_Glast_149 pH

description: single-cell RNA-seq


title: SVZ_Glast_153 pH

description: single-cell RNA-seq


title: SVZ_Glast_152 pH

description: single-cell RNA-seq


title: SVZ_Glast_15 pH

description: single-cell RNA-seq


title: GLAST368 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST367 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST369 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST370 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: TAP


title: GTEX-13NZA-2526-SM-GW23E

description:
sample name:
GTEX-13NZA-2526-SM-GW23E


title: GTEX-13OW5-2526-SM-GW19A

description:
sample name:
GTEX-13OW5-2526-SM-GW19A

value: Current


title: GTEX-13O3P-2526-SM-GW1V8

description:
sample name:
GTEX-13O3P-2526-SM-GW1V8


title: GTEX-13W46-0126-SM-GW1AN

description:
sample name:
GTEX-13W46-0126-SM-GW1AN


title: GLAST364 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST366 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST358 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-13NYS-1126-SM-GW1Y4

description:
sample name:
GTEX-13NYS-1126-SM-GW1Y4


title: GLAST359 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-13FTW-1326-SM-GW1RU

description:
sample name:
GTEX-13FTW-1326-SM-GW1RU


title: GTEX-139YR-1426-SM-GW1XK

description:
sample name:
GTEX-139YR-1426-SM-GW1XK


title: GTEX-13112-0226-SM-GW2AM

description:
sample name:
GTEX-13112-0226-SM-GW2AM


title: GTEX-1399R-1626-SM-GW1U7

description:
sample name:
GTEX-1399R-1626-SM-GW1U7


title: GTEX-12ZZY-0126-SM-GW1SQ

description:
sample name:
GTEX-12ZZY-0126-SM-GW1SQ


title: SVZ_Glast_148 pH

description: single-cell RNA-seq


title: SVZ_Glast_144 pH

description: single-cell RNA-seq


title: SVZ_Glast_146 pH

description: single-cell RNA-seq


title: SVZ_Glast_147 pH

description: single-cell RNA-seq


title: GLAST352 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST357 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST356 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST355 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-1212Z-0326-SM-GW2C5

description:
sample name:
GTEX-1212Z-0326-SM-GW2C5


title: GTEX-12KS4-0226-SM-GW2AT

description:
sample name:
GTEX-12KS4-0226-SM-GW2AT


title: GTEX-12696-0226-SM-GW1XR

description:
sample name:
GTEX-12696-0226-SM-GW1XR


title: GTEX-11ZUS-2726-SM-GW1TZ

description:
sample name:
GTEX-11ZUS-2726-SM-GW1TZ


title: GTEX-12WSA-0126-SM-GW1YY

description:
sample name:
GTEX-12WSA-0126-SM-GW1YY


title: GTEX-12WSE-0126-SM-GW23K

description:
sample name:
GTEX-12WSE-0126-SM-GW23K


title: GTEX-11TT1-2226-SM-GW2BX

description:
sample name:
GTEX-11TT1-2226-SM-GW2BX


title: GTEX-11UD2-2826-SM-GW23F

description:
sample name:
GTEX-11UD2-2826-SM-GW23F


title: GTEX-12ZZW-0626-SM-GW1F1

description:
sample name:
GTEX-12ZZW-0626-SM-GW1F1


title: SVZ_Glast_143 pH

description: single-cell RNA-seq


title: SVZ_Glast_140 pH

description: single-cell RNA-seq


title: SVZ_Glast_142 pH

description: single-cell RNA-seq


title: SVZ_Glast_141 pH

description: single-cell RNA-seq


title: GTEX-11NV4-1726-SM-GW1ZP

description:
sample name:
GTEX-11NV4-1726-SM-GW1ZP


title: GLAST345 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST349 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: oligodendrocyte


title: GLAST344 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST351 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST348 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST347 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST342 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: SVZ_Glast_136 pH

description: single-cell RNA-seq

value: astrocytes and NSC lineage cells


title: SVZ_Glast_138 pH

description: single-cell RNA-seq

value: TiCY


title: SVZ_Glast_137 pH

description: single-cell RNA-seq

value: 21 days post ischemia


title: SVZ_Glast_14 pH

description: single-cell RNA-seq


title: GLAST343 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: ventricular-subventricular zone


title: GLAST341 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST34 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST339 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: SVZ_Glast_135 pH

description: single-cell RNA-seq


title: SVZ_Glast_134 pH

description: single-cell RNA-seq


title: SVZ_Glast_132 pH

description: single-cell RNA-seq


title: SVZ_Glast_133 pH

description: single-cell RNA-seq


title: GTEX-YB5E-1826-SM-GW2AC

description:
sample name:
GTEX-YB5E-1826-SM-GW2AC

source_name: Prostate

value: Prostate


title: GTEX-XPT6-1526-SM-GW1W2

description:
sample name:
GTEX-XPT6-1526-SM-GW1W2


title: GTEX-YEC3-2226-SM-GW2B9

description:
sample name:
GTEX-YEC3-2226-SM-GW2B9


title: GTEX-XMK1-1026-SM-GW1G4

description:
sample name:
GTEX-XMK1-1026-SM-GW1G4


title: GTEX-1192W-2326-SM-GW2AU

description:
sample name:
GTEX-1192W-2326-SM-GW2AU


title: GTEX-111FC-1926-SM-GW23G

description:
sample name:
GTEX-111FC-1926-SM-GW23G


title: GTEX-Y111-2326-SM-GW1FN

description:
sample name:
GTEX-Y111-2326-SM-GW1FN

value: Severe


title: GTEX-XPVG-2026-SM-GW2AQ

description:
sample name:
GTEX-XPVG-2026-SM-GW2AQ

value: PT-XPVG

value: GTEX-XPVG


title: GTEX-XQ3S-2526-SM-GW1CJ

description:
sample name:
GTEX-XQ3S-2526-SM-GW1CJ

value: Moderate


title: GTEX-YJ89-2726-SM-GW198

description:
sample name:
GTEX-YJ89-2726-SM-GW198


title: GLAST337 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: WT

value: naive


title: GLAST336 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: aNSC


title: GLAST335 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST334 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: SVZ_Glast_129 pH

description: single-cell RNA-seq

value: striatum & ventricular-subventricular zone


title: SVZ_Glast_13 pH

description: single-cell RNA-seq


title: SVZ_Glast_131 pH

description: single-cell RNA-seq


title: SVZ_Glast_128 pH

description: single-cell RNA-seq


title: GLAST333 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-XBEW-2226-SM-GW2BG

description:
sample name:
GTEX-XBEW-2226-SM-GW2BG

value: PT-XBEW

value: GTEX-XBEW

value: Mild

value: Never


title: GTEX-WQUQ-2726-SM-GW1YT

description:
sample name:
GTEX-WQUQ-2726-SM-GW1YT

value: PT-WQUQ

value: GTEX-WQUQ


title: GTEX-WYJK-0626-SM-GW1WD

description:
sample name:
GTEX-WYJK-0626-SM-GW1WD

value: PT-WYJK

value: GTEX-WYJK


title: GTEX-WY7C-2026-SM-GW1WF

description:
sample name:
GTEX-WY7C-2026-SM-GW1WF

value: Prostate

value: Former


title: GTEX-X585-2726-SM-GW19Q

description:
sample name:
GTEX-X585-2726-SM-GW19Q

value: Severe


title: GTEX-X4XY-2826-SM-GW1FB

description:
sample name:
GTEX-X4XY-2826-SM-GW1FB


title: GTEX-UTHO-2726-SM-GW1B3

description:
sample name:
GTEX-UTHO-2726-SM-GW1B3

value: PT-UTHO

value: GTEX-UTHO

value: Current


title: GTEX-X261-2226-SM-GW1F6

description:
sample name:
GTEX-X261-2226-SM-GW1F6


title: GTEX-WHSE-2826-SM-GW1CM

description:
sample name:
GTEX-WHSE-2826-SM-GW1CM

value: PT-WHSE

value: GTEX-WHSE


title: GTEX-X3Y1-1026-SM-GW1UP

description:
sample name:
GTEX-X3Y1-1026-SM-GW1UP


title: GTEX-WOFL-2126-SM-GW1H4

description:
sample name:
GTEX-WOFL-2126-SM-GW1H4

value: PT-WOFL

value: GTEX-WOFL

value: Moderate


title: GTEX-WL46-2126-SM-GW1GC

description:
sample name:
GTEX-WL46-2126-SM-GW1GC


title: GTEX-XBED-1826-SM-GW1F8

description:
sample name:
GTEX-XBED-1826-SM-GW1F8

value: PT-XBED

value: GTEX-XBED


title: GTEX-WVLH-2826-SM-GW19C

description:
sample name:
GTEX-WVLH-2826-SM-GW19C

value: PT-WVLH

value: GTEX-WVLH


title: GTEX-WFG8-1826-SM-GW2B1

description:
sample name:
GTEX-WFG8-1826-SM-GW2B1

value: Mild


title: GTEX-XMD1-2626-SM-GW2BD

description:
sample name:
GTEX-XMD1-2626-SM-GW2BD


title: GTEX-X62O-2726-SM-GW1EV

description:
sample name:
GTEX-X62O-2726-SM-GW1EV


title: GTEX-WZTO-0926-SM-GW1WB

description:
sample name:
GTEX-WZTO-0926-SM-GW1WB

value: PT-WZTO

value: GTEX-WZTO


title: GTEX-XGQ4-1826-SM-GW1BK

description:
sample name:
GTEX-XGQ4-1826-SM-GW1BK

value: Prostate


title: GTEX-UPK5-2526-SM-GW2C4

description:
sample name:
GTEX-UPK5-2526-SM-GW2C4

value: Never


title: GLAST331 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: ventricular-subventricular zone

value: TAP

value: WT

value: naive


title: SVZ_Glast_123 pH

description: single-cell RNA-seq

value: striatum & ventricular-subventricular zone

value: astrocytes and NSC lineage cells

value: TiCY

value: 21 days post ischemia


title: GLAST33 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: SVZ_Glast_122 pH

description: single-cell RNA-seq


title: SVZ_Glast_121 pH

description: single-cell RNA-seq


title: SVZ_Glast_125 pH

description: single-cell RNA-seq


title: GLAST329 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST328 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST323 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: aNSC


title: GLAST326 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST325 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-S33H-1826-SM-GW1Y8

description:
sample name:
GTEX-S33H-1826-SM-GW1Y8

value: Former


title: GTEX-SJXC-2026-SM-GW19M

description:
sample name:
GTEX-SJXC-2026-SM-GW19M

value: PT-SJXC

value: GTEX-SJXC

value: Severe

value: Current


title: GTEX-SNOS-1026-SM-GW22Q

description:
sample name:
GTEX-SNOS-1026-SM-GW22Q

value: PT-SNOS

value: GTEX-SNOS

value: Mild


title: GTEX-SUCS-1126-SM-GW1SP

description:
sample name:
GTEX-SUCS-1126-SM-GW1SP

value: PT-SUCS

value: GTEX-SUCS

value: Prostate


title: GTEX-S7SE-2426-SM-GW2BP

description:
sample name:
GTEX-S7SE-2426-SM-GW2BP


title: GTEX-U8T8-2126-SM-GW2C6

description:
sample name:
GTEX-U8T8-2126-SM-GW2C6


title: GTEX-U3ZM-0926-SM-GW1ZM

description:
sample name:
GTEX-U3ZM-0926-SM-GW1ZM

value: Never


title: GTEX-U3ZH-0926-SM-GW1TY

description:
sample name:
GTEX-U3ZH-0926-SM-GW1TY


title: GTEX-S7PM-2426-SM-GW29V

description:
sample name:
GTEX-S7PM-2426-SM-GW29V


title: GTEX-S4Q7-1026-SM-GW1YE

description:
sample name:
GTEX-S4Q7-1026-SM-GW1YE


title: GTEX-T8EM-1826-SM-GW2BH

description:
sample name:
GTEX-T8EM-1826-SM-GW2BH


title: GTEX-SIU8-2226-SM-GW1BI

description:
sample name:
GTEX-SIU8-2226-SM-GW1BI


title: GTEX-U412-2026-SM-GW1AI

description:
sample name:
GTEX-U412-2026-SM-GW1AI

value: Moderate


title: GTEX-S3XE-1326-SM-GW1W3

description:
sample name:
GTEX-S3XE-1326-SM-GW1W3


title: GTEX-SNMC-0926-SM-GW1EX

description:
sample name:
GTEX-SNMC-0926-SM-GW1EX

value: PT-SNMC

value: GTEX-SNMC


title: GTEX-S95S-1026-SM-GW1A5

description:
sample name:
GTEX-S95S-1026-SM-GW1A5


title: GLAST324 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: ventricular-subventricular zone

value: WT

value: naive


title: GTEX-RWSA-2026-SM-GW2BR

description:
sample name:
GTEX-RWSA-2026-SM-GW2BR

value: PT-RWSA

value: GTEX-RWSA


title: GTEX-RVPU-1826-SM-GW1XP

description:
sample name:
GTEX-RVPU-1826-SM-GW1XP

value: PT-RVPU

value: GTEX-RVPU

value: Severe


title: GLAST322 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: aNSC


title: SVZ_Glast_114 pH

description: single-cell RNA-seq

value: striatum & ventricular-subventricular zone

value: astrocytes and NSC lineage cells

value: TiCY

value: 21 days post ischemia


title: SVZ_Glast_118 pH

description: single-cell RNA-seq


title: SVZ_Glast_116 pH

description: single-cell RNA-seq


title: SVZ_Glast_117 pH

description: single-cell RNA-seq


title: SVZ_Glast_119 pH

description: single-cell RNA-seq


title: SVZ_Glast_12 pH

description: single-cell RNA-seq


title: SVZ_Glast_120 pH

description: single-cell RNA-seq


title: SVZ_Glast_115 pH

description: single-cell RNA-seq


title: GTEX-RUSQ-1426-SM-GW1YP

description:
sample name:
GTEX-RUSQ-1426-SM-GW1YP

value: PT-RUSQ

value: GTEX-RUSQ

value: Prostate

value: Never


title: GTEX-1J8Q3-0926-SM-GW1X9

description:
sample name:
GTEX-1J8Q3-0926-SM-GW1X9

value: Former


title: GLAST320 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: ventricular-subventricular zone

value: TAP

value: WT


title: GLAST321 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: naive


title: SVZ_Glast_103 pH

description: single-cell RNA-seq


title: SVZ_Glast_105 pH

description: single-cell RNA-seq


title: SVZ_Glast_108 pH

description: single-cell RNA-seq


title: SVZ_Glast_109 pH

description: single-cell RNA-seq


title: SVZ_Glast_111 pH

description: single-cell RNA-seq


title: SVZ_Glast_113 pH

description: single-cell RNA-seq


title: SVZ_Glast_112 pH

description: single-cell RNA-seq


title: SVZ_Glast_11 pH

description: single-cell RNA-seq


title: GLAST319 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-1IKK5-2326-SM-GW2A2

description:
sample name:
GTEX-1IKK5-2326-SM-GW2A2

value: Moderate


title: GTEX-1J1R8-0726-SM-GW1UH

description:
sample name:
GTEX-1J1R8-0726-SM-GW1UH

value: Mild

value: Current


title: GTEX-1IGQW-2226-SM-GW1TH

description:
sample name:
GTEX-1IGQW-2226-SM-GW1TH


title: GTEX-1IDJH-2426-SM-GW1AV

description:
sample name:
GTEX-1IDJH-2426-SM-GW1AV


title: GLAST310 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-1IY9M-2426-SM-GW22N

description:
sample name:
GTEX-1IY9M-2426-SM-GW22N


title: GLAST311 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-1IKJJ-2026-SM-GW1TD

description:
sample name:
GTEX-1IKJJ-2026-SM-GW1TD


title: GLAST316 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST317 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: aNSC


title: GTEX-1IL2U-2826-SM-GW1TN

description:
sample name:
GTEX-1IL2U-2826-SM-GW1TN


title: GTEX-1HSKV-1726-SM-GW1X4

description:
sample name:
GTEX-1HSKV-1726-SM-GW1X4


title: GTEX-1I6K6-2126-SM-GW1X3

description:
sample name:
GTEX-1I6K6-2126-SM-GW1X3


title: GTEX-1ICLY-2826-SM-GW1UJ

description:
sample name:
GTEX-1ICLY-2826-SM-GW1UJ


title: GTEX-1HR9M-2026-SM-GW1X8

description:
sample name:
GTEX-1HR9M-2026-SM-GW1X8

value: Severe


title: GTEX-1H11D-1726-SM-GW24G

description:
sample name:
GTEX-1H11D-1726-SM-GW24G


title: GTEX-1H3NZ-2826-SM-GW1WL

description:
sample name:
GTEX-1H3NZ-2826-SM-GW1WL


title: GTEX-1H1ZS-2226-SM-GW1TQ

description:
sample name:
GTEX-1H1ZS-2226-SM-GW1TQ


title: GTEX-1H3VE-2126-SM-GW1UI

description:
sample name:
GTEX-1H3VE-2126-SM-GW1UI


title: GTEX-1GL5R-1226-SM-GW1X2

description:
sample name:
GTEX-1GL5R-1226-SM-GW1X2


title: GTEX-1GMR3-1826-SM-GW1BX

description:
sample name:
GTEX-1GMR3-1826-SM-GW1BX


title: GTEX-1GZ2Q-2426-SM-GW1WZ

description:
sample name:
GTEX-1GZ2Q-2426-SM-GW1WZ


title: GTEX-1GN73-1626-SM-GW22G

description:
sample name:
GTEX-1GN73-1626-SM-GW22G


title: GTEX-1GTWX-2126-SM-GW2A5

description:
sample name:
GTEX-1GTWX-2126-SM-GW2A5


title: SVZ_Glast_102 pH

description: single-cell RNA-seq

value: striatum & ventricular-subventricular zone

value: astrocytes and NSC lineage cells


title: GTEX-1F75W-2526-SM-GW1UO

description:
sample name:
GTEX-1F75W-2526-SM-GW1UO


title: GTEX-1F6IF-0326-SM-GW1BZ

description:
sample name:
GTEX-1F6IF-0326-SM-GW1BZ


title: GTEX-1F5PK-1126-SM-GW2A4

description:
sample name:
GTEX-1F5PK-1126-SM-GW2A4


title: GTEX-1F75A-2226-SM-GW1WY

description:
sample name:
GTEX-1F75A-2226-SM-GW1WY


title: GTEX-1CAMQ-2226-SM-GW1T9

description:
sample name:
GTEX-1CAMQ-2226-SM-GW1T9


title: GTEX-1E2YA-2226-SM-GW1XE

description:
sample name:
GTEX-1E2YA-2226-SM-GW1XE


title: GTEX-1B98T-2626-SM-GW29W

description:
sample name:
GTEX-1B98T-2626-SM-GW29W


title: GLAST298 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST296 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST293 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST303 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST294 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST306 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST3 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: neuroblast


title: GLAST307 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST292 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST288 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST285 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST284 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-1A3MV-0826-SM-GW1X5

description:
sample name:
GTEX-1A3MV-0826-SM-GW1X5


title: GTEX-17HGU-2226-SM-GW22C

description:
sample name:
GTEX-17HGU-2226-SM-GW22C


title: GTEX-1B8KE-1026-SM-GW1UF

description:
sample name:
GTEX-1B8KE-1026-SM-GW1UF


title: Str_Glast_89 pH

description: single-cell RNA-seq

value: TiCY

value: 21 days post ischemia


title: Str_Glast_95 pH

description: single-cell RNA-seq


title: Str_Glast_88 pH

description: single-cell RNA-seq


title: Str_Glast_90 pH

description: single-cell RNA-seq


title: Str_Glast_93 pH

description: single-cell RNA-seq


title: SVZ_Glast_10 pH

description: single-cell RNA-seq


title: Str_Glast_91 pH

description: single-cell RNA-seq


title: SVZ_Glast_101 pH

description: single-cell RNA-seq


title: Str_Glast_97 pH

description: single-cell RNA-seq


title: SVZ_Glast_100 pH

description: single-cell RNA-seq


title: Str_Glast_94 pH

description: single-cell RNA-seq


title: GTEX-15UKP-0626-SM-GW1SV

description:
sample name:
GTEX-15UKP-0626-SM-GW1SV

value: Prostate


title: GTEX-17EVQ-2626-SM-GW1WT

description:
sample name:
GTEX-17EVQ-2626-SM-GW1WT


title: GTEX-16YQH-2326-SM-GW1UM

description:
sample name:
GTEX-16YQH-2326-SM-GW1UM


title: GTEX-15SZO-2126-SM-GW1AS

description:
sample name:
GTEX-15SZO-2126-SM-GW1AS


title: Str_Glast_87 pH

description: single-cell RNA-seq


title: Str_Glast_85 pH

description: single-cell RNA-seq


title: Str_Glast_86 pH

description: single-cell RNA-seq


title: GTEX-15G1A-1326-SM-GW1TB

description:
sample name:
GTEX-15G1A-1326-SM-GW1TB


title: GTEX-15SKB-2226-SM-GW1BT

description:
sample name:
GTEX-15SKB-2226-SM-GW1BT


title: GLAST282 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST283 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_84 pH

description: single-cell RNA-seq


title: Str_Glast_83 pH

description: single-cell RNA-seq


title: Str_Glast_81 pH

description: single-cell RNA-seq


title: Str_Glast_82 pH

description: single-cell RNA-seq


title: GLAST281 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST280 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_80 pH

description: single-cell RNA-seq


title: Str_Glast_76 pH

description: single-cell RNA-seq


title: GLAST277 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST278 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST275 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST273 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST279 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST272 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-147GR-2526-SM-GW1AW

description:
sample name:
GTEX-147GR-2526-SM-GW1AW


title: GTEX-14JG1-2426-SM-GW22A

description:
sample name:
GTEX-14JG1-2426-SM-GW22A


title: GTEX-13X6I-2226-SM-GW2AR

description:
sample name:
GTEX-13X6I-2226-SM-GW2AR


title: GTEX-139TT-1726-SM-GW1G3

description:
sample name:
GTEX-139TT-1726-SM-GW1G3


title: GTEX-14C39-2226-SM-GW1T7

description:
sample name:
GTEX-14C39-2226-SM-GW1T7

value: Never


title: GTEX-14BMV-2326-SM-GW1T8

description:
sample name:
GTEX-14BMV-2326-SM-GW1T8


title: GTEX-15CHQ-2826-SM-GW1AQ

description:
sample name:
GTEX-15CHQ-2826-SM-GW1AQ

value: Former


title: GTEX-13NZA-2226-SM-GW1FG

description:
sample name:
GTEX-13NZA-2226-SM-GW1FG


title: GTEX-13FHP-2726-SM-GW2A8

description:
sample name:
GTEX-13FHP-2726-SM-GW2A8


title: GTEX-13NYS-1026-SM-GW19Z

description:
sample name:
GTEX-13NYS-1026-SM-GW19Z


title: GTEX-15CHR-1226-SM-GW1AU

description:
sample name:
GTEX-15CHR-1226-SM-GW1AU


title: GTEX-13IVO-1326-SM-GW19W

description:
sample name:
GTEX-13IVO-1326-SM-GW19W


title: GTEX-13N1W-2526-SM-GW1FU

description:
sample name:
GTEX-13N1W-2526-SM-GW1FU


title: GTEX-139YR-1326-SM-GW1XY

description:
sample name:
GTEX-139YR-1326-SM-GW1XY


title: GTEX-13FTW-1226-SM-GW21A

description:
sample name:
GTEX-13FTW-1226-SM-GW21A


title: GTEX-13OW5-2426-SM-GW1AL

description:
sample name:
GTEX-13OW5-2426-SM-GW1AL


title: GTEX-14PJO-2826-SM-GW1BR

description:
sample name:
GTEX-14PJO-2826-SM-GW1BR


title: GTEX-12ZZW-2626-SM-GW1A2

description:
sample name:
GTEX-12ZZW-2626-SM-GW1A2


title: GTEX-13W46-2826-SM-GW19U

description:
sample name:
GTEX-13W46-2826-SM-GW19U


title: GTEX-12WSE-2526-SM-GW1B5

description:
sample name:
GTEX-12WSE-2526-SM-GW1B5


title: Str_Glast_72 pH

description: single-cell RNA-seq


title: Str_Glast_73 pH

description: single-cell RNA-seq


title: GLAST270 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: ventricular-subventricular zone


title: GTEX-12ZZY-2526-SM-GW1ZO

description:
sample name:
GTEX-12ZZY-2526-SM-GW1ZO


title: GTEX-13112-2226-SM-GW1FY

description:
sample name:
GTEX-13112-2226-SM-GW1FY


title: GTEX-12WSF-2526-SM-GW2AW

description:
sample name:
GTEX-12WSF-2526-SM-GW2AW


title: GTEX-13111-1326-SM-GW1V5

description:
sample name:
GTEX-13111-1326-SM-GW1V5


title: Str_Glast_70 pH

description: single-cell RNA-seq


title: Str_Glast_7 pH

description: single-cell RNA-seq


title: GLAST269 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST259 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_71 pH

description: single-cell RNA-seq


title: GTEX-11ZUS-2126-SM-GW1ZD

description:
sample name:
GTEX-11ZUS-2126-SM-GW1ZD


title: GTEX-12KS4-2526-SM-GW1AD

description:
sample name:
GTEX-12KS4-2526-SM-GW1AD


title: GTEX-11ZU8-0526-SM-GW1AE

description:
sample name:
GTEX-11ZU8-0526-SM-GW1AE


title: GTEX-12696-2226-SM-GW2AG

description:
sample name:
GTEX-12696-2226-SM-GW2AG


title: GTEX-12WSA-2426-SM-GW1XF

description:
sample name:
GTEX-12WSA-2426-SM-GW1XF


title: GTEX-11UD2-2626-SM-GW2BV

description:
sample name:
GTEX-11UD2-2626-SM-GW2BV


title: GTEX-11TT1-2026-SM-GW1A8

description:
sample name:
GTEX-11TT1-2026-SM-GW1A8


title: GTEX-11WQC-1926-SM-GW1FO

description:
sample name:
GTEX-11WQC-1926-SM-GW1FO


title: GTEX-11WQK-2726-SM-GW1XL

description:
sample name:
GTEX-11WQK-2726-SM-GW1XL


title: GTEX-11DYG-2526-SM-GW197

description:
sample name:
GTEX-11DYG-2526-SM-GW197


title: GTEX-11NV4-1826-SM-GW29Q

description:
sample name:
GTEX-11NV4-1826-SM-GW29Q


title: GTEX-11ONC-0626-SM-GW1BN

description:
sample name:
GTEX-11ONC-0626-SM-GW1BN


title: Str_Glast_62 pH

description: single-cell RNA-seq


title: GLAST260 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: TAP


title: Str_Glast_66 pH

description: single-cell RNA-seq


title: GLAST257 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: WT


title: Str_Glast_64 pH

description: single-cell RNA-seq


title: Str_Glast_61 pH

description: single-cell RNA-seq


title: GLAST258 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: naive


title: GLAST256 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-111FC-2026-SM-GW2C2

description:
sample name:
GTEX-111FC-2026-SM-GW2C2

value: Moderate


title: GTEX-1192X-2126-SM-GW1EQ

description:
sample name:
GTEX-1192X-2126-SM-GW1EQ


title: GTEX-117YW-1426-SM-GW24I

description:
sample name:
GTEX-117YW-1426-SM-GW24I

value: Mild


title: Str_Glast_60 pH

description: single-cell RNA-seq


title: Str_Glast_6 pH

description: single-cell RNA-seq


title: Str_Glast_58 pH

description: single-cell RNA-seq


title: GLAST255 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-ZVT2-0326-SM-GW1B8

description:
sample name:
GTEX-ZVT2-0326-SM-GW1B8

source_name: Ovary

value: Ovary


title: GTEX-ZPIC-1426-SM-GW2B6

description:
sample name:
GTEX-ZPIC-1426-SM-GW2B6

value: PT-ZPIC

value: GTEX-ZPIC

value: Current


title: GTEX-ZYWO-1926-SM-GW1BL

description:
sample name:
GTEX-ZYWO-1926-SM-GW1BL

value: PT-ZYWO

value: GTEX-ZYWO


title: GTEX-ZYFG-1726-SM-GW29P

description:
sample name:
GTEX-ZYFG-1726-SM-GW29P

value: PT-ZYFG

value: GTEX-ZYFG


title: GTEX-ZP4G-0626-SM-GW1H3

description:
sample name:
GTEX-ZP4G-0626-SM-GW1H3


title: GTEX-ZZPU-2126-SM-GW1YK

description:
sample name:
GTEX-ZZPU-2126-SM-GW1YK

value: PT-ZZPU

value: GTEX-ZZPU


title: GTEX-ZVT3-2626-SM-GW1FA

description:
sample name:
GTEX-ZVT3-2626-SM-GW1FA

value: Never


title: GLAST253 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: ventricular-subventricular zone


title: GTEX-YFC4-2726-SM-GW2C1

description:
sample name:
GTEX-YFC4-2726-SM-GW2C1


title: GTEX-ZLWG-0926-SM-GW1GK

description:
sample name:
GTEX-ZLWG-0926-SM-GW1GK

value: PT-ZLWG

value: GTEX-ZLWG

value: Former


title: Str_Glast_57 pH

description: single-cell RNA-seq

value: striatum & ventricular-subventricular zone

value: astrocytes and NSC lineage cells

value: TiCY

value: 21 days post ischemia


title: GLAST254 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: TAP

value: WT

value: naive


title: GTEX-Y114-1726-SM-GW2BE

description:
sample name:
GTEX-Y114-1726-SM-GW2BE

value: Mild

value: Ovary

value: Current


title: GLAST252 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-XYKS-1726-SM-GW1Y5

description:
sample name:
GTEX-XYKS-1726-SM-GW1Y5

value: PT-XYKS

value: GTEX-XYKS


title: GTEX-ZAJG-2726-SM-GW1Z2

description:
sample name:
GTEX-ZAJG-2726-SM-GW1Z2

value: PT-ZAJG

value: GTEX-ZAJG


title: Str_Glast_56 pH

description: single-cell RNA-seq


title: GTEX-XUJ4-1326-SM-GW1U9

description:
sample name:
GTEX-XUJ4-1326-SM-GW1U9


title: GTEX-XUW1-0126-SM-GW29T

description:
sample name:
GTEX-XUW1-0126-SM-GW29T


title: Str_Glast_55 pH

description: single-cell RNA-seq


title: GTEX-XUZC-1026-SM-GW1CO

description:
sample name:
GTEX-XUZC-1026-SM-GW1CO

value: PT-XUZC

value: GTEX-XUZC


title: GTEX-XMD2-2726-SM-GW1ET

description:
sample name:
GTEX-XMD2-2726-SM-GW1ET

value: Never


title: GTEX-XOT4-2726-SM-GW2B4

description:
sample name:
GTEX-XOT4-2726-SM-GW2B4


title: GLAST271 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: ventricular-subventricular zone


title: GTEX-X8HC-2726-SM-GW2AL

description:
sample name:
GTEX-X8HC-2726-SM-GW2AL


title: GTEX-X15G-1726-SM-GW1F5

description:
sample name:
GTEX-X15G-1726-SM-GW1F5

value: Former


title: GTEX-WYVS-1526-SM-GW1VM

description:
sample name:
GTEX-WYVS-1526-SM-GW1VM

value: PT-WYVS

value: GTEX-WYVS


title: GTEX-X4EP-2426-SM-GW23J

description:
sample name:
GTEX-X4EP-2426-SM-GW23J


title: GTEX-WXYG-1426-SM-GW1H5

description:
sample name:
GTEX-WXYG-1426-SM-GW1H5

value: PT-WXYG

value: GTEX-WXYG


title: GTEX-WWYW-2726-SM-GW1BC

description:
sample name:
GTEX-WWYW-2726-SM-GW1BC

value: PT-WWYW

value: GTEX-WWYW


title: GLAST249 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: aNSC

value: WT

value: naive


title: GLAST245 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST248 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST250 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-WI4N-2526-SM-GW1AM

description:
sample name:
GTEX-WI4N-2526-SM-GW1AM

value: Mild

value: Ovary


title: GLAST216 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST244 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST225 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST243 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_47 pH

description: single-cell RNA-seq

value: striatum & ventricular-subventricular zone

value: astrocytes and NSC lineage cells

value: TiCY

value: 21 days post ischemia


title: Str_Glast_52 pH

description: single-cell RNA-seq


title: Str_Glast_51 pH

description: single-cell RNA-seq


title: Str_Glast_53 pH

description: single-cell RNA-seq


title: Str_Glast_5 pH

description: single-cell RNA-seq


title: Str_Glast_49 pH

description: single-cell RNA-seq


title: GTEX-UJHI-1226-SM-GW1ZL

description:
sample name:
GTEX-UJHI-1226-SM-GW1ZL

value: PT-UJHI

value: GTEX-UJHI

value: Current


title: GTEX-WRHU-2026-SM-GW2BC

description:
sample name:
GTEX-WRHU-2026-SM-GW2BC

value: PT-WRHU

value: GTEX-WRHU

value: Never


title: GTEX-WEY5-0626-SM-GW1FH

description:
sample name:
GTEX-WEY5-0626-SM-GW1FH


title: GTEX-TMMY-1726-SM-GW2C9

description:
sample name:
GTEX-TMMY-1726-SM-GW2C9

value: PT-TMMY

value: GTEX-TMMY


title: GLAST215 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: ventricular-subventricular zone

value: TAP


title: Str_Glast_45 pH

description: single-cell RNA-seq


title: GTEX-W5WG-0926-SM-GW1YX

description:
sample name:
GTEX-W5WG-0926-SM-GW1YX

value: Former


title: GTEX-U3ZN-1026-SM-GW1U5

description:
sample name:
GTEX-U3ZN-1026-SM-GW1U5


title: GLAST214 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: aNSC

value: WT

value: naive


title: GTEX-T6MO-1126-SM-GW18Z

description:
sample name:
GTEX-T6MO-1126-SM-GW18Z

value: Mild

value: Ovary


title: GTEX-TSE9-2226-SM-GW1VN

description:
sample name:
GTEX-TSE9-2226-SM-GW1VN


title: GTEX-TML8-0926-SM-GW2AN

description:
sample name:
GTEX-TML8-0926-SM-GW2AN


title: Str_Glast_40 pH

description: single-cell RNA-seq

value: striatum & ventricular-subventricular zone

value: astrocytes and NSC lineage cells

value: TiCY

value: 21 days post ischemia


title: Str_Glast_37 pH

description: single-cell RNA-seq


title: GLAST213 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_36 pH

description: single-cell RNA-seq


title: GLAST212 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_41 pH

description: single-cell RNA-seq


title: Str_Glast_33 pH

description: single-cell RNA-seq


title: GLAST207 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST211 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-T5JW-0426-SM-GW1BB

description:
sample name:
GTEX-T5JW-0426-SM-GW1BB

value: Current


title: GLAST268 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_35 pH

description: single-cell RNA-seq


title: GLAST210 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_32 pH

description: single-cell RNA-seq


title: GLAST208 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-T2IS-2026-SM-GW1ZS

description:
sample name:
GTEX-T2IS-2026-SM-GW1ZS


title: GLAST201 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_3 pH

description: single-cell RNA-seq


title: GLAST264 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_31 pH

description: single-cell RNA-seq


title: Str_Glast_29 pH

description: single-cell RNA-seq


title: GLAST206 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_28 pH

description: single-cell RNA-seq


title: Str_Glast_25 pH

description: single-cell RNA-seq


title: GTEX-1RDX4-0826-SM-GW1VW

description:
sample name:
GTEX-1RDX4-0826-SM-GW1VW


title: GTEX-SN8G-2426-SM-GW1GD

description:
sample name:
GTEX-SN8G-2426-SM-GW1GD


title: GTEX-S4UY-1026-SM-GW23C

description:
sample name:
GTEX-S4UY-1026-SM-GW23C


title: GTEX-SE5C-0826-SM-GW1GG

description:
sample name:
GTEX-SE5C-0826-SM-GW1GG


title: GTEX-1S5ZU-2326-SM-GW1ZZ

description:
sample name:
GTEX-1S5ZU-2326-SM-GW1ZZ


title: GTEX-RWS6-1026-SM-GW1A1

description:
sample name:
GTEX-RWS6-1026-SM-GW1A1


title: GTEX-S341-0726-SM-GW1Y6

description:
sample name:
GTEX-S341-0726-SM-GW1Y6


title: GTEX-R55G-1526-SM-GW1Y7

description:
sample name:
GTEX-R55G-1526-SM-GW1Y7


title: GTEX-S4P3-0926-SM-GW1YV

description:
sample name:
GTEX-S4P3-0926-SM-GW1YV


title: GTEX-POMQ-1426-SM-GW1ZQ

description:
sample name:
GTEX-POMQ-1426-SM-GW1ZQ

value: PT-POMQ

value: GTEX-POMQ


title: GTEX-P4PP-2426-SM-GW23I

description:
sample name:
GTEX-P4PP-2426-SM-GW23I

value: Never


title: GTEX-1RNTQ-1726-SM-GW1SH

description:
sample name:
GTEX-1RNTQ-1726-SM-GW1SH


title: GTEX-S7SF-1326-SM-GW2BM

description:
sample name:
GTEX-S7SF-1326-SM-GW2BM


title: GTEX-1QP67-1526-SM-GW2CB

description:
sample name:
GTEX-1QP67-1526-SM-GW2CB


title: GLAST196 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST20 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-1R9PN-0626-SM-GW1SG

description:
sample name:
GTEX-1R9PN-0626-SM-GW1SG


title: Str_Glast_27 pH

description: single-cell RNA-seq


title: GTEX-1R9JW-1226-SM-GW214

description:
sample name:
GTEX-1R9JW-1226-SM-GW214


title: GLAST198 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-1R46S-1826-SM-GW2CE

description:
sample name:
GTEX-1R46S-1826-SM-GW2CE


title: GTEX-1QPFJ-1726-SM-GW213

description:
sample name:
GTEX-1QPFJ-1726-SM-GW213


title: Str_Glast_24 pH

description: single-cell RNA-seq


title: GTEX-1QEPI-2726-SM-GW216

description:
sample name:
GTEX-1QEPI-2726-SM-GW216


title: GLAST195 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_23 pH

description: single-cell RNA-seq


title: GTEX-1PIEJ-1626-SM-GW1VX

description:
sample name:
GTEX-1PIEJ-1626-SM-GW1VX


title: GTEX-1PBJI-2026-SM-GW1SF

description:
sample name:
GTEX-1PBJI-2026-SM-GW1SF


title: GLAST193 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST192 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_21 pH

description: single-cell RNA-seq


title: GTEX-1NV5F-1626-SM-GW2CG

description:
sample name:
GTEX-1NV5F-1626-SM-GW2CG


title: GTEX-1LGOU-1026-SM-GW1SC

description:
sample name:
GTEX-1LGOU-1026-SM-GW1SC


title: GTEX-1NUQO-1726-SM-GW1SE

description:
sample name:
GTEX-1NUQO-1726-SM-GW1SE


title: Str_Glast_20 pH

description: single-cell RNA-seq


title: Str_Glast_22 pH

description: single-cell RNA-seq


title: GTEX-1MCYP-1426-SM-GW1SJ

description:
sample name:
GTEX-1MCYP-1426-SM-GW1SJ


title: GTEX-1MCC2-1026-SM-GW1SA

description:
sample name:
GTEX-1MCC2-1026-SM-GW1SA


title: GTEX-1N7R6-1826-SM-GW1VV

description:
sample name:
GTEX-1N7R6-1826-SM-GW1VV


title: GTEX-1LKK1-1626-SM-GW1SI

description:
sample name:
GTEX-1LKK1-1626-SM-GW1SI


title: GTEX-1QP28-1326-SM-GW1W8

description:
sample name:
GTEX-1QP28-1326-SM-GW1W8


title: GTEX-1LVAM-1826-SM-GW1SL

description:
sample name:
GTEX-1LVAM-1826-SM-GW1SL


title: GLAST190 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_2 pH

description: single-cell RNA-seq


title: Str_Glast_18 pH

description: single-cell RNA-seq


title: GTEX-1KANC-1026-SM-GW1SK

description:
sample name:
GTEX-1KANC-1026-SM-GW1SK


title: GLAST189 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-1K9T9-2426-SM-GW1SD

description:
sample name:
GTEX-1K9T9-2426-SM-GW1SD


title: Str_Glast_175 pH

description: single-cell RNA-seq


title: GLAST188 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-1JN1M-2126-SM-GW212

description:
sample name:
GTEX-1JN1M-2126-SM-GW212


title: GTEX-1JMOU-1626-SM-GW1W6

description:
sample name:
GTEX-1JMOU-1626-SM-GW1W6


title: GLAST187 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_174 pH

description: single-cell RNA-seq


title: GTEX-1JN76-1426-SM-GW215

description:
sample name:
GTEX-1JN76-1426-SM-GW215


title: GLAST191 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST186 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-1J8JJ-0826-SM-GW16I

description:
sample name:
GTEX-1J8JJ-0826-SM-GW16I


title: GTEX-1J1OQ-1626-SM-GW1Q7

description:
sample name:
GTEX-1J1OQ-1626-SM-GW1Q7


title: Str_Glast_173 pH

description: single-cell RNA-seq


title: GTEX-1J8QM-1326-SM-GW21O

description:
sample name:
GTEX-1J8QM-1326-SM-GW21O


title: GLAST185 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-1IKOE-2326-SM-GW21T

description:
sample name:
GTEX-1IKOE-2326-SM-GW21T


title: Str_Glast_172 pH

description: single-cell RNA-seq


title: GLAST184 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_167 pH

description: single-cell RNA-seq


title: Str_Glast_169 pH

description: single-cell RNA-seq


title: GTEX-1IDJU-1126-SM-GW1VJ

description:
sample name:
GTEX-1IDJU-1126-SM-GW1VJ


title: GLAST183 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST180 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST179 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-1HSGN-2426-SM-GW1Q6

description:
sample name:
GTEX-1HSGN-2426-SM-GW1Q6


title: Str_Glast_161 pH

description: single-cell RNA-seq


title: GTEX-1HBPH-2726-SM-GW169

description:
sample name:
GTEX-1HBPH-2726-SM-GW169


title: GTEX-1H2FU-2326-SM-GW1QE

description:
sample name:
GTEX-1H2FU-2326-SM-GW1QE


title: GTEX-1HCUA-1326-SM-GW235

description:
sample name:
GTEX-1HCUA-1326-SM-GW235


title: GTEX-1H1DF-2326-SM-GW1C6

description:
sample name:
GTEX-1H1DF-2326-SM-GW1C6


title: GTEX-1IDJE-1126-SM-GW1QB

description:
sample name:
GTEX-1IDJE-1126-SM-GW1QB


title: GTEX-1HCU6-2226-SM-GW236

description:
sample name:
GTEX-1HCU6-2226-SM-GW236


title: GTEX-1HCU8-2126-SM-GW1EN

description:
sample name:
GTEX-1HCU8-2126-SM-GW1EN


title: GTEX-1IDJI-1526-SM-GW1Q4

description:
sample name:
GTEX-1IDJI-1526-SM-GW1Q4


title: GLAST178 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_171 pH

description: single-cell RNA-seq


title: GTEX-1H1CY-1926-SM-GW1Q5

description:
sample name:
GTEX-1H1CY-1926-SM-GW1Q5


title: GTEX-1GZHY-2426-SM-GW1Q8

description:
sample name:
GTEX-1GZHY-2426-SM-GW1Q8


title: GLAST182 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-1GN1W-1426-SM-GW1Q9

description:
sample name:
GTEX-1GN1W-1426-SM-GW1Q9


title: GTEX-1F6RS-2726-SM-GW1QD

description:
sample name:
GTEX-1F6RS-2726-SM-GW1QD


title: Str_Glast_159 pH

description: single-cell RNA-seq


title: GLAST177 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST176 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-1F48J-2326-SM-GW16X

description:
sample name:
GTEX-1F48J-2326-SM-GW16X


title: GTEX-1F52S-2226-SM-GW1QC

description:
sample name:
GTEX-1F52S-2226-SM-GW1QC


title: Str_Glast_157 pH

description: single-cell RNA-seq


title: Str_Glast_163 pH

description: single-cell RNA-seq


title: GLAST175 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-1EWIQ-2226-SM-GW16Y

description:
sample name:
GTEX-1EWIQ-2226-SM-GW16Y


title: Str_Glast_160 pH

description: single-cell RNA-seq


title: GTEX-1F5PL-1626-SM-GW1QA

description:
sample name:
GTEX-1F5PL-1626-SM-GW1QA


title: GTEX-1CB4H-2526-SM-GW1GW

description:
sample name:
GTEX-1CB4H-2526-SM-GW1GW


title: GTEX-1CAMS-2126-SM-GW21Q

description:
sample name:
GTEX-1CAMS-2126-SM-GW21Q


title: GLAST174 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-1CAV2-1526-SM-GW1VG

description:
sample name:
GTEX-1CAV2-1526-SM-GW1VG


title: GTEX-1C475-0426-SM-GW176

description:
sample name:
GTEX-1C475-0426-SM-GW176


title: GLAST173 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_151 pH

description: single-cell RNA-seq


title: Str_Glast_152 pH

description: single-cell RNA-seq


title: Str_Glast_150 pH

description: single-cell RNA-seq


title: GTEX-1AMEY-0926-SM-GW16U

description:
sample name:
GTEX-1AMEY-0926-SM-GW16U


title: Str_Glast_154 pH

description: single-cell RNA-seq


title: GTEX-1A3MW-2726-SM-GW172

description:
sample name:
GTEX-1A3MW-2726-SM-GW172

value: Moderate


title: GLAST170 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: ventricular-subventricular zone


title: GTEX-1A32A-2726-SM-GW1V2

description:
sample name:
GTEX-1A32A-2726-SM-GW1V2


title: GTEX-19HZE-2226-SM-GW16V

description:
sample name:
GTEX-19HZE-2226-SM-GW16V


title: Str_Glast_15 pH

description: single-cell RNA-seq


title: GTEX-183WM-1926-SM-GW16G

description:
sample name:
GTEX-183WM-1926-SM-GW16G


title: GLAST167 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-1AMFI-1426-SM-GW173

description:
sample name:
GTEX-1AMFI-1426-SM-GW173


title: GTEX-17HG3-1826-SM-GW238

description:
sample name:
GTEX-17HG3-1826-SM-GW238


title: Str_Glast_148 pH

description: single-cell RNA-seq


title: Str_Glast_147 pH

description: single-cell RNA-seq


title: GTEX-16NPV-2326-SM-GW1V1

description:
sample name:
GTEX-16NPV-2326-SM-GW1V1


title: GTEX-17F9Y-2226-SM-GW239

description:
sample name:
GTEX-17F9Y-2226-SM-GW239


title: Str_Glast_144 pH

description: single-cell RNA-seq


title: GLAST172 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-16NGA-0426-SM-GW16O

description:
sample name:
GTEX-16NGA-0426-SM-GW16O


title: GTEX-16MT8-2226-SM-GW21N

description:
sample name:
GTEX-16MT8-2226-SM-GW21N


title: Str_Glast_143 pH

description: single-cell RNA-seq


title: GLAST165 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST163 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-18D9A-0826-SM-GW171

description:
sample name:
GTEX-18D9A-0826-SM-GW171


title: GLAST169 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-15UF6-2026-SM-GW21M

description:
sample name:
GTEX-15UF6-2026-SM-GW21M


title: GTEX-18A7A-2626-SM-GW16T

description:
sample name:
GTEX-18A7A-2626-SM-GW16T


title: GLAST168 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-15SDE-0926-SM-GW16H

description:
sample name:
GTEX-15SDE-0926-SM-GW16H


title: Str_Glast_141 pH

description: single-cell RNA-seq


title: GLAST162 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-17JCI-2326-SM-GW232

description:
sample name:
GTEX-17JCI-2326-SM-GW232


title: GTEX-15FZZ-0826-SM-GW1VD

description:
sample name:
GTEX-15FZZ-0826-SM-GW1VD


title: Str_Glast_142 pH

description: single-cell RNA-seq


title: GTEX-15ETS-1426-SM-GW175

description:
sample name:
GTEX-15ETS-1426-SM-GW175


title: GTEX-15SHU-2726-SM-GW16S

description:
sample name:
GTEX-15SHU-2726-SM-GW16S


title: Str_Glast_149 pH

description: single-cell RNA-seq


title: GLAST161 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST200 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-15DYW-2626-SM-GW16A

description:
sample name:
GTEX-15DYW-2626-SM-GW16A


title: Str_Glast_140 pH

description: single-cell RNA-seq


title: GTEX-15ER7-2326-SM-GW1VO

description:
sample name:
GTEX-15ER7-2326-SM-GW1VO


title: GLAST164 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST160 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: TAP


title: GTEX-15DDE-2326-SM-GW1VI

description:
sample name:
GTEX-15DDE-2326-SM-GW1VI


title: GLAST16 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_139 pH

description: single-cell RNA-seq


title: GTEX-15DCD-2126-SM-GW16C

description:
sample name:
GTEX-15DCD-2126-SM-GW16C


title: GTEX-14PQA-2626-SM-GW16M

description:
sample name:
GTEX-14PQA-2626-SM-GW16M

value: Former


title: Str_Glast_136 pH

description: single-cell RNA-seq


title: GLAST159 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-14PN3-1526-SM-GW1UZ

description:
sample name:
GTEX-14PN3-1526-SM-GW1UZ


title: GTEX-14PKU-1226-SM-GW233

description:
sample name:
GTEX-14PKU-1226-SM-GW233


title: Str_Glast_135 pH

description: single-cell RNA-seq


title: GTEX-14PJM-2426-SM-GW174

description:
sample name:
GTEX-14PJM-2426-SM-GW174


title: GLAST156 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-14PHY-1626-SM-GW237

description:
sample name:
GTEX-14PHY-1626-SM-GW237


title: Str_Glast_14 pH

description: single-cell RNA-seq


title: GTEX-14PHW-2226-SM-GW16D

description:
sample name:
GTEX-14PHW-2226-SM-GW16D


title: GTEX-15EOM-1526-SM-GW16Z

description:
sample name:
GTEX-15EOM-1526-SM-GW16Z


title: GLAST157 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_134 pH

description: single-cell RNA-seq


title: GLAST154 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: aNSC


title: GTEX-14JG6-0626-SM-GW16R

description:
sample name:
GTEX-14JG6-0626-SM-GW16R


title: GTEX-14H4A-2226-SM-GW16W

description:
sample name:
GTEX-14H4A-2226-SM-GW16W


title: GTEX-14BMU-1726-SM-GW16P

description:
sample name:
GTEX-14BMU-1726-SM-GW16P


title: Str_Glast_130 pH

description: single-cell RNA-seq


title: GLAST153 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: WT


title: GTEX-14BIN-1426-SM-GW234

description:
sample name:
GTEX-14BIN-1426-SM-GW234


title: GLAST152 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: naive


title: Str_Glast_133 pH

description: single-cell RNA-seq


title: GLAST158 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-14BIM-2026-SM-GW16J

description:
sample name:
GTEX-14BIM-2026-SM-GW16J

value: Mild


title: Str_Glast_13 pH

description: single-cell RNA-seq


title: GLAST149 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-14AS3-1326-SM-GW16Q

description:
sample name:
GTEX-14AS3-1326-SM-GW16Q

value: Ovary


title: GTEX-14LZ3-2326-SM-GW1VH

description:
sample name:
GTEX-14LZ3-2326-SM-GW1VH


title: GTEX-146FH-2526-SM-GW1H1

description:
sample name:
GTEX-146FH-2526-SM-GW1H1


title: Str_Glast_129 pH

description: single-cell RNA-seq

value: striatum & ventricular-subventricular zone


title: GTEX-145ME-1226-SM-GW1CQ

description:
sample name:
GTEX-145ME-1226-SM-GW1CQ


title: Str_Glast_131 pH

description: single-cell RNA-seq

value: astrocytes and NSC lineage cells


title: GLAST147 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-14DAQ-2226-SM-GW21P

description:
sample name:
GTEX-14DAQ-2226-SM-GW21P


title: GTEX-13SLX-2426-SM-GW1EY

description:
sample name:
GTEX-13SLX-2426-SM-GW1EY


title: GTEX-145LS-2326-SM-GW16E

description:
sample name:
GTEX-145LS-2326-SM-GW16E


title: GTEX-13VXT-1526-SM-GW1ZA

description:
sample name:
GTEX-13VXT-1526-SM-GW1ZA


title: Str_Glast_124 pH

description: single-cell RNA-seq

value: TiCY


title: Str_Glast_128 pH

description: single-cell RNA-seq

value: 21 days post ischemia


title: GTEX-13X6H-1026-SM-GW24H

description:
sample name:
GTEX-13X6H-1026-SM-GW24H

value: Current


title: GLAST146 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-13QJC-1526-SM-GW29O

description:
sample name:
GTEX-13QJC-1526-SM-GW29O


title: GLAST143 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST144 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-13QIC-1526-SM-GW1D8

description:
sample name:
GTEX-13QIC-1526-SM-GW1D8


title: GTEX-13QBU-1526-SM-GW1YG

description:
sample name:
GTEX-13QBU-1526-SM-GW1YG


title: Str_Glast_123 pH

description: single-cell RNA-seq


title: Str_Glast_122 pH

description: single-cell RNA-seq


title: GTEX-13PL7-2326-SM-GW1Z9

description:
sample name:
GTEX-13PL7-2326-SM-GW1Z9


title: GLAST142 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-13OVJ-2426-SM-GW2BA

description:
sample name:
GTEX-13OVJ-2426-SM-GW2BA


title: GTEX-13N11-0526-SM-GW1A6

description:
sample name:
GTEX-13N11-0526-SM-GW1A6


title: GTEX-13O3O-2726-SM-GW29N

description:
sample name:
GTEX-13O3O-2726-SM-GW29N


title: Str_Glast_120 pH

description: single-cell RNA-seq


title: GLAST141 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-13FTY-1826-SM-GW23X

description:
sample name:
GTEX-13FTY-1826-SM-GW23X


title: Str_Glast_12 pH

description: single-cell RNA-seq


title: GTEX-1399U-1726-SM-GW1CW

description:
sample name:
GTEX-1399U-1726-SM-GW1CW


title: GLAST140 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_119 pH

description: single-cell RNA-seq


title: GTEX-133LE-1226-SM-GW1A3

description:
sample name:
GTEX-133LE-1226-SM-GW1A3


title: GLAST139 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-12ZZX-2026-SM-GW222

description:
sample name:
GTEX-12ZZX-2026-SM-GW222


title: GTEX-12WSK-1926-SM-GW1AP

description:
sample name:
GTEX-12WSK-1926-SM-GW1AP


title: Str_Glast_117 pH

description: single-cell RNA-seq


title: GTEX-12WSG-1426-SM-GW1FC

description:
sample name:
GTEX-12WSG-1426-SM-GW1FC


title: GLAST137 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_115 pH

description: single-cell RNA-seq


title: GLAST136 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-12WSJ-1226-SM-GW2BN

description:
sample name:
GTEX-12WSJ-1226-SM-GW2BN


title: Str_Glast_114 pH

description: single-cell RNA-seq


title: Str_Glast_116 pH

description: single-cell RNA-seq


title: GTEX-11ZTS-1926-SM-GW1GA

description:
sample name:
GTEX-11ZTS-1926-SM-GW1GA


title: GTEX-11VI4-1026-SM-GW223

description:
sample name:
GTEX-11VI4-1026-SM-GW223


title: Str_Glast_112 pH

description: single-cell RNA-seq


title: GLAST134 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-11XUK-1626-SM-GW1YD

description:
sample name:
GTEX-11XUK-1626-SM-GW1YD


title: GLAST133 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_111 pH

description: single-cell RNA-seq


title: GTEX-11GSP-0226-SM-GW1Q3

description:
sample name:
GTEX-11GSP-0226-SM-GW1Q3


title: GTEX-11EMC-1726-SM-GW2AF

description:
sample name:
GTEX-11EMC-1726-SM-GW2AF


title: GTEX-11EM3-1726-SM-GW199

description:
sample name:
GTEX-11EM3-1726-SM-GW199


title: GTEX-12WSD-2726-SM-GW1UA

description:
sample name:
GTEX-12WSD-2726-SM-GW1UA


title: Str_Glast_11 pH

description: single-cell RNA-seq


title: GTEX-ZVZQ-0526-SM-GW2A9

description:
sample name:
GTEX-ZVZQ-0526-SM-GW2A9

source_name: Muscle - Skeletal

value: PT-ZVZQ

value: GTEX-ZVZQ

value: Muscle - Skeletal


title: GTEX-11ZTT-1826-SM-GW1BG

description:
sample name:
GTEX-11ZTT-1826-SM-GW1BG

value: Never


title: GLAST132 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: ventricular-subventricular zone


title: Str_Glast_108 pH

description: single-cell RNA-seq


title: GLAST130 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-Y111-0326-SM-GW1Z6

description:
sample name:
GTEX-Y111-0326-SM-GW1Z6


title: GTEX-XYKS-2426-SM-GW1W1

description:
sample name:
GTEX-XYKS-2426-SM-GW1W1

value: PT-XYKS

value: GTEX-XYKS


title: Str_Glast_107 pH

description: single-cell RNA-seq


title: Str_Glast_106 pH

description: single-cell RNA-seq


title: GTEX-XMD2-0526-SM-GW1Y1

description:
sample name:
GTEX-XMD2-0526-SM-GW1Y1

value: Moderate


title: GLAST13 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: WT


title: GTEX-XMK1-2326-SM-GW1SM

description:
sample name:
GTEX-XMK1-2326-SM-GW1SM


title: GTEX-XMD1-0626-SM-GW19T

description:
sample name:
GTEX-XMD1-0626-SM-GW19T


title: GTEX-11I78-1926-SM-GW2BI

description:
sample name:
GTEX-11I78-1926-SM-GW2BI


title: GLAST129 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: aNSC

value: naive


title: GLAST135 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: Str_Glast_105 pH

description: single-cell RNA-seq


title: GLAST128 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GLAST131 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: neuroblast


title: GTEX-X62O-1226-SM-GW1ZE

description:
sample name:
GTEX-X62O-1226-SM-GW1ZE

value: Severe

value: Former


title: GTEX-ZVZP-2526-SM-GW1EJ

description:
sample name:
GTEX-ZVZP-2526-SM-GW1EJ

value: PT-ZVZP

value: GTEX-ZVZP

value: Mild


title: Str_Glast_104 pH

description: single-cell RNA-seq

value: striatum & ventricular-subventricular zone

value: astrocytes and NSC lineage cells

value: TiCY

value: 21 days post ischemia


title: GTEX-X585-0626-SM-GW227

description:
sample name:
GTEX-X585-0626-SM-GW227

value: Muscle - Skeletal


title: GLAST126 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: ventricular-subventricular zone


title: GTEX-X4XY-0626-SM-GW1XO

description:
sample name:
GTEX-X4XY-0626-SM-GW1XO

value: Never


title: Str_Glast_103 pH

description: single-cell RNA-seq


title: Str_Glast_100 pH

description: single-cell RNA-seq


title: GTEX-X4EO-0526-SM-GW1XH

description:
sample name:
GTEX-X4EO-0526-SM-GW1XH


title: GTEX-X4EP-0926-SM-GW1XJ

description:
sample name:
GTEX-X4EP-0926-SM-GW1XJ


title: GTEX-WYBS-0526-SM-GW1Y3

description:
sample name:
GTEX-WYBS-0526-SM-GW1Y3

value: PT-WYBS

value: GTEX-WYBS

value: Moderate


title: GTEX-WWYW-0526-SM-GW194

description:
sample name:
GTEX-WWYW-0526-SM-GW194

value: PT-WWYW

value: GTEX-WWYW

value: Current


title: GLAST123 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: WT

value: naive


title: GTEX-WOFL-0626-SM-GW1G1

description:
sample name:
GTEX-WOFL-0626-SM-GW1G1

value: PT-WOFL

value: GTEX-WOFL

value: Former


title: Str_Glast_10 pH

description: single-cell RNA-seq

value: striatum & ventricular-subventricular zone

value: astrocytes and NSC lineage cells


title: GLAST125 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: TAP


title: GTEX-W5WG-1926-SM-GW2AV

description:
sample name:
GTEX-W5WG-1926-SM-GW2AV

value: Muscle - Skeletal


title: GTEX-W5X1-2726-SM-GW19S

description:
sample name:
GTEX-W5X1-2726-SM-GW19S

value: Mild


title: GTEX-U3ZH-1926-SM-GW1XZ

description:
sample name:
GTEX-U3ZH-1926-SM-GW1XZ


title: GLAST120 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: ventricular-subventricular zone


title: GTEX-X5EB-2326-SM-GW1TW

description:
sample name:
GTEX-X5EB-2326-SM-GW1TW


title: GTEX-14PJ6-1426-SM-GW16N

description:
sample name:
GTEX-14PJ6-1426-SM-GW16N

value: Ovary


title: GLAST12 pD [scNOMe-seq]

description: single-cell NOMe-seq


title: GTEX-T8EM-1326-SM-GW2BQ

description:
sample name:
GTEX-T8EM-1326-SM-GW2BQ

value: Never


title: OB95 pF

description: single-cell RNA-seq

value: olfactory bulb & late RMS

value: neuroblast/neuron (OB)


title: Str_Glast_1 pH

description: single-cell RNA-seq

value: TiCY

value: 21 days post ischemia


title: GLAST119 pD [scNOMe-seq]

description: single-cell NOMe-seq

value: WT


title: OB79 pF

description: single-cell RNA-seq

value: naive