title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_82]

description:
E10_5-DPFC_9_C7828ANXX_GCTACGCT-GCGTAAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt

value: yolk sac Mk


title: Endothelium (Endo) E10.5 [E10.5 Endo_21]

status: Public on Dec 21 2022

type: SRA

city: Melbourne

first: Jarny

last: Choi

state: Victoria

address: The University of Melbourne

department: Anatomy and Neuroscience

country: Australia

institute: Centre for Stem Cell Systems

description:
E10_5-Endo_33_C7828ANXX_GCTACGCT-TATCCTCT_L006
processed data file:
counts.Unfiltered.3.0.txt

library_source: transcriptomic

data_processing:
Read alignment was done by Rsubread v1.22.2, using subjunc function with default parameters.
Summarised gene counts file was generated using Rsubread v1.22.2, using featureCounts function with parameters (GTF.featureType="Exon", userMetaFeatures=T) amongst other standard parameters. Ensembl mouse genome version GRCm38.84.chr.gtf was used.
Filtering was performed on raw counts matrix using scater package in R, by applying isOutlier function on both samples and genes using (nmads=3, type="lower", log=T) parameters. Genes were further filtered out for row mean<1.
To calculate the cpm matrix, computeSumFactors function from scran package in R was used.
Genome_build: Ensembl mouse genome version ens84_GRCm38
Supplementary_files_format_and_content: Tab delimited text file contains a matrix with raw gene counts, with Ensembl gene ids as row ids and sample names as column names.

molecule: total RNA

organism: Mus musculus

source_name: C57BL/6 E10.5 yolk sac

growth_protocol: in vivo

extract_protocol:
yolk sac was dissociated with trypsin (E7.25-7.775) or collagenase/dispase (E8.25-E10.5). Cells were sorted by population first then captured on Fluidigm C1 integrated fluidic circuit (IFC) with the capacity for 96 individual cells and a 10-17um capture aperture
Libraries were constructed using the Nextera XT kit and Illumina 96 index kits according  to the Fluidigm protocol modified from the Illumina protocol to use ¼ of the kit per 96  well plate (Illumina Protocol #15031942 Rev C “Nextera XT DNA Sample Preparation  Guide”; Fluidigm Protocol #PN100-7168 G1 “Using the C1 Single Cell Auto Prep  System to Generate mRNA from Single Cells and Libraries for Sequencing”)

tag: strain/genotype

tag: Stage

tag: tissue source

value: Yolk sac

tag: cell type

value: yolk sac endothelium


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_80]

description:
E10_5-DPFC_94_C7828ANXX_CGAGGCTG-CTAAGCCT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_81]

description:
E10_5-DPFC_96_C7828ANXX_GTAGAGGA-CTAAGCCT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_79]

description:
E10_5-DPFC_92_C7828ANXX_CAGAGAGG-CTAAGCCT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_76]

description:
E10_5-DPFC_8_C7828ANXX_CAGAGAGG-GCGTAAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_75]

description:
E10_5-DPFC_89_C7828ANXX_GGACTCCT-CTAAGCCT_L003
processed data file:
counts.Unfiltered.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_72]

description:
E10_5-DPFC_83_C7828ANXX_AAGAGGCA-AAGGAGTA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_74]

description:
E10_5-DPFC_88_C7828ANXX_TCCTGAGC-CTAAGCCT_L003
processed data file:
counts.Unfiltered.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_78]

description:
E10_5-DPFC_91_C7828ANXX_CTCTCTAC-CTAAGCCT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_77]

description:
E10_5-DPFC_90_C7828ANXX_TAGGCATG-CTAAGCCT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_73]

description:
E10_5-DPFC_86_C7828ANXX_CGTACTAG-CTAAGCCT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_66]

description:
E10_5-DPFC_76_C7828ANXX_TCCTGAGC-AAGGAGTA_L003
processed data file:
counts.Unfiltered.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_68]

description:
E10_5-DPFC_7_C7828ANXX_CTCTCTAC-GCGTAAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_70]

description:
E10_5-DPFC_81_C7828ANXX_GCTACGCT-AAGGAGTA_L003
processed data file:
counts.Unfiltered.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_62]

description:
E10_5-DPFC_72_C7828ANXX_GTAGAGGA-ACTGCATA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_64]

description:
E10_5-DPFC_74_C7828ANXX_CGTACTAG-AAGGAGTA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E10.5 [E10.5 Endo_6]

description:
E10_5-Endo_17_C7828ANXX_GGACTCCT-CTCTCTAT_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_69]

description:
E10_5-DPFC_80_C7828ANXX_CAGAGAGG-AAGGAGTA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_61]

description:
E10_5-DPFC_71_C7828ANXX_AAGAGGCA-ACTGCATA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_59]

description:
E10_5-DPFC_6_C7828ANXX_TAGGCATG-GCGTAAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_58]

description:
E10_5-DPFC_68_C7828ANXX_CAGAGAGG-ACTGCATA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_60]

description:
E10_5-DPFC_70_C7828ANXX_CGAGGCTG-ACTGCATA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_56]

description:
E10_5-DPFC_66_C7828ANXX_TAGGCATG-ACTGCATA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_57]

description:
E10_5-DPFC_67_C7828ANXX_CTCTCTAC-ACTGCATA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_55]

description:
E10_5-DPFC_65_C7828ANXX_GGACTCCT-ACTGCATA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_54]

description:
E10_5-DPFC_64_C7828ANXX_TCCTGAGC-ACTGCATA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_53]

description:
E10_5-DPFC_63_C7828ANXX_AGGCAGAA-ACTGCATA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_51]

description:
E10_5-DPFC_61_C7828ANXX_TAAGGCGA-ACTGCATA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_50]

description:
E10_5-DPFC_60_C7828ANXX_GTAGAGGA-GTAAGGAG_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_49]

description:
E10_5-DPFC_5_C7828ANXX_GGACTCCT-GCGTAAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_71]

description:
E10_5-DPFC_82_C7828ANXX_CGAGGCTG-AAGGAGTA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_48]

description:
E10_5-DPFC_59_C7828ANXX_AAGAGGCA-GTAAGGAG_L003
processed data file:
counts.Unfiltered.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_67]

description:
E10_5-DPFC_79_C7828ANXX_CTCTCTAC-AAGGAGTA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_63]

description:
E10_5-DPFC_73_C7828ANXX_TAAGGCGA-AAGGAGTA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_65]

description:
E10_5-DPFC_75_C7828ANXX_AGGCAGAA-AAGGAGTA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_46]

description:
E10_5-DPFC_57_C7828ANXX_GCTACGCT-GTAAGGAG_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_42]

description:
E10_5-DPFC_52_C7828ANXX_TCCTGAGC-GTAAGGAG_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_37]

description:
E10_5-DPFC_48_C7828ANXX_GTAGAGGA-AGAGTAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_38]

description:
E10_5-DPFC_49_C7828ANXX_TAAGGCGA-GTAAGGAG_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_36]

description:
E10_5-DPFC_47_C7828ANXX_AAGAGGCA-AGAGTAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_44]

description:
E10_5-DPFC_54_C7828ANXX_TAGGCATG-GTAAGGAG_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_43]

description:
E10_5-DPFC_53_C7828ANXX_GGACTCCT-GTAAGGAG_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_34]

description:
E10_5-DPFC_45_C7828ANXX_GCTACGCT-AGAGTAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_35]

description:
E10_5-DPFC_46_C7828ANXX_CGAGGCTG-AGAGTAGA_L003
processed data file:
counts.Unfiltered.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_33]

description:
E10_5-DPFC_44_C7828ANXX_CAGAGAGG-AGAGTAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_32]

description:
E10_5-DPFC_43_C7828ANXX_CTCTCTAC-AGAGTAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_52]

description:
E10_5-DPFC_62_C7828ANXX_CGTACTAG-ACTGCATA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_41]

description:
E10_5-DPFC_51_C7828ANXX_AGGCAGAA-GTAAGGAG_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_40]

description:
E10_5-DPFC_50_C7828ANXX_CGTACTAG-GTAAGGAG_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_30]

description:
E10_5-DPFC_41_C7828ANXX_GGACTCCT-AGAGTAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_31]

description:
E10_5-DPFC_42_C7828ANXX_TAGGCATG-AGAGTAGA_L003
processed data file:
counts.Unfiltered.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_29]

description:
E10_5-DPFC_40_C7828ANXX_TCCTGAGC-AGAGTAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_47]

description:
E10_5-DPFC_58_C7828ANXX_CGAGGCTG-GTAAGGAG_L003
processed data file:
counts.Unfiltered.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_27]

description:
E10_5-DPFC_39_C7828ANXX_AGGCAGAA-AGAGTAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_26]

description:
E10_5-DPFC_38_C7828ANXX_CGTACTAG-AGAGTAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_45]

description:
E10_5-DPFC_55_C7828ANXX_CTCTCTAC-GTAAGGAG_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_28]

description:
E10_5-DPFC_3_C7828ANXX_AGGCAGAA-GCGTAAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_25]

description:
E10_5-DPFC_36_C7828ANXX_GTAGAGGA-TATCCTCT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_24]

description:
E10_5-DPFC_35_C7828ANXX_AAGAGGCA-TATCCTCT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_23]

description:
E10_5-DPFC_33_C7828ANXX_GCTACGCT-TATCCTCT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_21]

description:
E10_5-DPFC_31_C7828ANXX_CTCTCTAC-TATCCTCT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_39]

description:
E10_5-DPFC_4_C7828ANXX_TCCTGAGC-GCGTAAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_20]

description:
E10_5-DPFC_30_C7828ANXX_TAGGCATG-TATCCTCT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_22]

description:
E10_5-DPFC_32_C7828ANXX_CAGAGAGG-TATCCTCT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_19]

description:
E10_5-DPFC_2_C7828ANXX_CGTACTAG-GCGTAAGA_L003
processed data file:
counts.Unfiltered.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_18]

description:
E10_5-DPFC_29_C7828ANXX_GGACTCCT-TATCCTCT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_17]

description:
E10_5-DPFC_28_C7828ANXX_TCCTGAGC-TATCCTCT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_16]

description:
E10_5-DPFC_27_C7828ANXX_AGGCAGAA-TATCCTCT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_15]

description:
E10_5-DPFC_26_C7828ANXX_CGTACTAG-TATCCTCT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_14]

description:
E10_5-DPFC_25_C7828ANXX_TAAGGCGA-TATCCTCT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_13]

description:
E10_5-DPFC_24_C7828ANXX_GTAGAGGA-CTCTCTAT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_9]

description:
E10_5-DPFC_1_C7828ANXX_TAAGGCGA-GCGTAAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_10]

description:
E10_5-DPFC_20_C7828ANXX_CAGAGAGG-CTCTCTAT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_7]

description:
E10_5-DPFC_18_C7828ANXX_TAGGCATG-CTCTCTAT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_12]

description:
E10_5-DPFC_22_C7828ANXX_CGAGGCTG-CTCTCTAT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_8]

description:
E10_5-DPFC_19_C7828ANXX_CTCTCTAC-CTCTCTAT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_5]

description:
E10_5-DPFC_16_C7828ANXX_TCCTGAGC-CTCTCTAT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_3]

description:
E10_5-DPFC_14_C7828ANXX_CGTACTAG-CTCTCTAT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_4]

description:
E10_5-DPFC_15_C7828ANXX_AGGCAGAA-CTCTCTAT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_6]

description:
E10_5-DPFC_17_C7828ANXX_GGACTCCT-CTCTCTAT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_2]

description:
E10_5-DPFC_12_C7828ANXX_GTAGAGGA-GCGTAAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_1]

description:
E10_5-DPFC_11_C7828ANXX_AAGAGGCA-GCGTAAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_158]

description:
9_C4P47ANXX_GCTACGCT-GCGTAAGA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt

source_name: Flk1-GFP/+ E7.25 yolk sac

value: yolk sac mesoderm


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_89]

description:
9_C4P47ANXX_GCTACGCT-GCGTAAGA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt

source_name: C57BL/6 E8.5 yolk sac

value: yolk sac EMP


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_0]

description:
E10_5-DPFC_10_C7828ANXX_CGAGGCTG-GCGTAAGA_L003
processed data file:
counts.Unfiltered.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_78]

description:
9_C4P47ANXX_GCTACGCT-GCGTAAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt

source_name: C57BL/6 E8.25 yolk sac


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_83]

description:
9_C4P47ANXX_GCTACGCT-GCGTAAGA_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt

value: yolk sac erythrocytes


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_157]

description:
96_C4P47ANXX_GTAGAGGA-CTAAGCCT_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_88]

description:
96_C4P47ANXX_GTAGAGGA-CTAAGCCT_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_82]

description:
96_C4P47ANXX_GTAGAGGA-CTAAGCCT_L001
processed data file:
counts.Unfiltered.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_155]

description:
95_C4P47ANXX_AAGAGGCA-CTAAGCCT_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_156]

description:
96_C4P47ANXX_GTAGAGGA-CTAAGCCT_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_87]

description:
95_C4P47ANXX_AAGAGGCA-CTAAGCCT_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_78]

description:
95_C4P47ANXX_AAGAGGCA-CTAAGCCT_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_153]

description:
94_C4P47ANXX_CGAGGCTG-CTAAGCCT_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_86]

description:
94_C4P47ANXX_CGAGGCTG-CTAAGCCT_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E10.5 [E10.5 DPFC_11]

description:
E10_5-DPFC_21_C7828ANXX_GCTACGCT-CTCTCTAT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_77]

description:
94_C4P47ANXX_CGAGGCTG-CTAAGCCT_L003
processed data file:
counts.Unfiltered.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_77]

description:
94_C4P47ANXX_CGAGGCTG-CTAAGCCT_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_152]

description:
93_C4P47ANXX_GCTACGCT-CTAAGCCT_L007
processed data file:
counts.Unfiltered.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_151]

description:
93_C4P47ANXX_GCTACGCT-CTAAGCCT_L006
processed data file:
counts.Unfiltered.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_85]

description:
93_C4P47ANXX_GCTACGCT-CTAAGCCT_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_76]

description:
93_C4P47ANXX_GCTACGCT-CTAAGCCT_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_150]

description:
92_C4P47ANXX_CAGAGAGG-CTAAGCCT_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_149]

description:
92_C4P47ANXX_CAGAGAGG-CTAAGCCT_L006
processed data file:
counts.Unfiltered.3.0.txt


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_52]

description:
9_C4P47ANXX_GCTACGCT-GCGTAAGA_L004
processed data file:
counts.Unfiltered.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_84]

description:
92_C4P47ANXX_CAGAGAGG-CTAAGCCT_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_76]

description:
92_C4P47ANXX_CAGAGAGG-CTAAGCCT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_148]

description:
91_C4P47ANXX_CTCTCTAC-CTAAGCCT_L006
processed data file:
counts.Unfiltered.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_83]

description:
91_C4P47ANXX_CTCTCTAC-CTAAGCCT_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_75]

description:
91_C4P47ANXX_CTCTCTAC-CTAAGCCT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_81]

description:
91_C4P47ANXX_CTCTCTAC-CTAAGCCT_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_147]

description:
90_C4P47ANXX_TAGGCATG-CTAAGCCT_L007
processed data file:
counts.Unfiltered.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_82]

description:
90_C4P47ANXX_TAGGCATG-CTAAGCCT_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_154]

description:
94_C4P47ANXX_CGAGGCTG-CTAAGCCT_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_74]

description:
90_C4P47ANXX_TAGGCATG-CTAAGCCT_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_80]

description:
90_C4P47ANXX_TAGGCATG-CTAAGCCT_L001
processed data file:
counts.Unfiltered.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_146]

description:
8_C4P47ANXX_CAGAGAGG-GCGTAAGA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_145]

description:
8_C4P47ANXX_CAGAGAGG-GCGTAAGA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_81]

description:
8_C4P47ANXX_CAGAGAGG-GCGTAAGA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_73]

description:
8_C4P47ANXX_CAGAGAGG-GCGTAAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_51]

description:
8_C4P47ANXX_CAGAGAGG-GCGTAAGA_L004
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_144]

description:
89_C4P47ANXX_GGACTCCT-CTAAGCCT_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_73]

description:
8_C4P47ANXX_CAGAGAGG-GCGTAAGA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_143]

description:
89_C4P47ANXX_GGACTCCT-CTAAGCCT_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_80]

description:
89_C4P47ANXX_GGACTCCT-CTAAGCCT_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_141]

description:
88_C4P47ANXX_TCCTGAGC-CTAAGCCT_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_72]

description:
89_C4P47ANXX_GGACTCCT-CTAAGCCT_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_75]

description:
92_C4P47ANXX_CAGAGAGG-CTAAGCCT_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_72]

description:
88_C4P47ANXX_TCCTGAGC-CTAAGCCT_L003
processed data file:
counts.Unfiltered.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_77]

description:
88_C4P47ANXX_TCCTGAGC-CTAAGCCT_L001
processed data file:
counts.Unfiltered.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_142]

description:
88_C4P47ANXX_TCCTGAGC-CTAAGCCT_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_74]

description:
90_C4P47ANXX_TAGGCATG-CTAAGCCT_L003
processed data file:
counts.Unfiltered.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_71]

description:
87_C4P47ANXX_AGGCAGAA-CTAAGCCT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_70]

description:
87_C4P47ANXX_AGGCAGAA-CTAAGCCT_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_140]

description:
87_C4P47ANXX_AGGCAGAA-CTAAGCCT_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_71]

description:
88_C4P47ANXX_TCCTGAGC-CTAAGCCT_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_76]

description:
87_C4P47ANXX_AGGCAGAA-CTAAGCCT_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_138]

description:
86_C4P47ANXX_CGTACTAG-CTAAGCCT_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_139]

description:
86_C4P47ANXX_CGTACTAG-CTAAGCCT_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_69]

description:
86_C4P47ANXX_CGTACTAG-CTAAGCCT_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_70]

description:
86_C4P47ANXX_CGTACTAG-CTAAGCCT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_77]

description:
85_C4P47ANXX_TAAGGCGA-CTAAGCCT_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_137]

description:
85_C4P47ANXX_TAAGGCGA-CTAAGCCT_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_79]

description:
8_C4P47ANXX_CAGAGAGG-GCGTAAGA_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_136]

description:
85_C4P47ANXX_TAAGGCGA-CTAAGCCT_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_50]

description:
85_C4P47ANXX_TAAGGCGA-CTAAGCCT_L004
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_68]

description:
85_C4P47ANXX_TAAGGCGA-CTAAGCCT_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_78]

description:
89_C4P47ANXX_GGACTCCT-CTAAGCCT_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_135]

description:
84_C4P47ANXX_GTAGAGGA-AAGGAGTA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_134]

description:
84_C4P47ANXX_GTAGAGGA-AAGGAGTA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_49]

description:
84_C4P47ANXX_GTAGAGGA-AAGGAGTA_L004
processed data file:
counts.Unfiltered.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_133]

description:
83_C4P47ANXX_AAGAGGCA-AAGGAGTA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_66]

description:
83_C4P47ANXX_AAGAGGCA-AAGGAGTA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_68]

description:
84_C4P47ANXX_GTAGAGGA-AAGGAGTA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_75]

description:
83_C4P47ANXX_AAGAGGCA-AAGGAGTA_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_78]

description:
86_C4P47ANXX_CGTACTAG-CTAAGCCT_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_67]

description:
82_C4P47ANXX_CGAGGCTG-AAGGAGTA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_132]

description:
82_C4P47ANXX_CGAGGCTG-AAGGAGTA_L007
processed data file:
counts.Unfiltered.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_65]

description:
82_C4P47ANXX_CGAGGCTG-AAGGAGTA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_74]

description:
82_C4P47ANXX_CGAGGCTG-AAGGAGTA_L001
processed data file:
counts.Unfiltered.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_74]

description:
82_C4P47ANXX_CGAGGCTG-AAGGAGTA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_130]

description:
81_C4P47ANXX_GCTACGCT-AAGGAGTA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_129]

description:
81_C4P47ANXX_GCTACGCT-AAGGAGTA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_69]

description:
85_C4P47ANXX_TAAGGCGA-CTAAGCCT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_73]

description:
81_C4P47ANXX_GCTACGCT-AAGGAGTA_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_128]

description:
80_C4P47ANXX_CAGAGAGG-AAGGAGTA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_127]

description:
80_C4P47ANXX_CAGAGAGG-AAGGAGTA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_73]

description:
81_C4P47ANXX_GCTACGCT-AAGGAGTA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_66]

description:
81_C4P47ANXX_GCTACGCT-AAGGAGTA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_72]

description:
80_C4P47ANXX_CAGAGAGG-AAGGAGTA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_65]

description:
80_C4P47ANXX_CAGAGAGG-AAGGAGTA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_64]

description:
81_C4P47ANXX_GCTACGCT-AAGGAGTA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_72]

description:
80_C4P47ANXX_CAGAGAGG-AAGGAGTA_L001
processed data file:
counts.Unfiltered.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_125]

description:
7_C4P47ANXX_CTCTCTAC-GCGTAAGA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_79]

description:
88_C4P47ANXX_TCCTGAGC-CTAAGCCT_L005
processed data file:
counts.Unfiltered.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_126]

description:
7_C4P47ANXX_CTCTCTAC-GCGTAAGA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_71]

description:
7_C4P47ANXX_CTCTCTAC-GCGTAAGA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_76]

description:
84_C4P47ANXX_GTAGAGGA-AAGGAGTA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_67]

description:
84_C4P47ANXX_GTAGAGGA-AAGGAGTA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_75]

description:
83_C4P47ANXX_AAGAGGCA-AAGGAGTA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_48]

description:
7_C4P47ANXX_CTCTCTAC-GCGTAAGA_L004
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_64]

description:
7_C4P47ANXX_CTCTCTAC-GCGTAAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_71]

description:
7_C4P47ANXX_CTCTCTAC-GCGTAAGA_L001
processed data file:
counts.Unfiltered.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_70]

description:
79_C4P47ANXX_CTCTCTAC-AAGGAGTA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_63]

description:
79_C4P47ANXX_CTCTCTAC-AAGGAGTA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_131]

description:
82_C4P47ANXX_CGAGGCTG-AAGGAGTA_L006
processed data file:
counts.Unfiltered.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_63]

description:
79_C4P47ANXX_CTCTCTAC-AAGGAGTA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_62]

description:
78_C4P47ANXX_TAGGCATG-AAGGAGTA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_70]

description:
78_C4P47ANXX_TAGGCATG-AAGGAGTA_L001
processed data file:
counts.Unfiltered.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_124]

description:
78_C4P47ANXX_TAGGCATG-AAGGAGTA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_68]

description:
77_C4P47ANXX_GGACTCCT-AAGGAGTA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_69]

description:
78_C4P47ANXX_TAGGCATG-AAGGAGTA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_122]

description:
77_C4P47ANXX_GGACTCCT-AAGGAGTA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_123]

description:
77_C4P47ANXX_GGACTCCT-AAGGAGTA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_121]

description:
76_C4P47ANXX_TCCTGAGC-AAGGAGTA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_69]

description:
77_C4P47ANXX_GGACTCCT-AAGGAGTA_L001
processed data file:
counts.Unfiltered.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_120]

description:
76_C4P47ANXX_TCCTGAGC-AAGGAGTA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_68]

description:
76_C4P47ANXX_TCCTGAGC-AAGGAGTA_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_62]

description:
77_C4P47ANXX_GGACTCCT-AAGGAGTA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_118]

description:
75_C4P47ANXX_AGGCAGAA-AAGGAGTA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_61]

description:
76_C4P47ANXX_TCCTGAGC-AAGGAGTA_L003
processed data file:
counts.Unfiltered.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_67]

description:
76_C4P47ANXX_TCCTGAGC-AAGGAGTA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_66]

description:
75_C4P47ANXX_AGGCAGAA-AAGGAGTA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_67]

description:
75_C4P47ANXX_AGGCAGAA-AAGGAGTA_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_117]

description:
74_C4P47ANXX_CGTACTAG-AAGGAGTA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_47]

description:
75_C4P47ANXX_AGGCAGAA-AAGGAGTA_L004
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_60]

description:
75_C4P47ANXX_AGGCAGAA-AAGGAGTA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_61]

description:
75_C4P47ANXX_AGGCAGAA-AAGGAGTA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_65]

description:
74_C4P47ANXX_CGTACTAG-AAGGAGTA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_59]

description:
74_C4P47ANXX_CGTACTAG-AAGGAGTA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_116]

description:
74_C4P47ANXX_CGTACTAG-AAGGAGTA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_66]

description:
74_C4P47ANXX_CGTACTAG-AAGGAGTA_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_115]

description:
73_C4P47ANXX_TAAGGCGA-AAGGAGTA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_64]

description:
73_C4P47ANXX_TAAGGCGA-AAGGAGTA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_114]

description:
72_C4P47ANXX_GTAGAGGA-ACTGCATA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_58]

description:
73_C4P47ANXX_TAAGGCGA-AAGGAGTA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_62]

description:
71_C4P47ANXX_AAGAGGCA-ACTGCATA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_111]

description:
71_C4P47ANXX_AAGAGGCA-ACTGCATA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_113]

description:
72_C4P47ANXX_GTAGAGGA-ACTGCATA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_59]

description:
72_C4P47ANXX_GTAGAGGA-ACTGCATA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_64]

description:
72_C4P47ANXX_GTAGAGGA-ACTGCATA_L001
processed data file:
counts.Unfiltered.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_57]

description:
72_C4P47ANXX_GTAGAGGA-ACTGCATA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_63]

description:
72_C4P47ANXX_GTAGAGGA-ACTGCATA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_119]

description:
75_C4P47ANXX_AGGCAGAA-AAGGAGTA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_112]

description:
71_C4P47ANXX_AAGAGGCA-ACTGCATA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_58]

description:
71_C4P47ANXX_AAGAGGCA-ACTGCATA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_56]

description:
71_C4P47ANXX_AAGAGGCA-ACTGCATA_L003
processed data file:
counts.Unfiltered.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_110]

description:
70_C4P47ANXX_CGAGGCTG-ACTGCATA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_109]

description:
70_C4P47ANXX_CGAGGCTG-ACTGCATA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_63]

description:
71_C4P47ANXX_AAGAGGCA-ACTGCATA_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_61]

description:
70_C4P47ANXX_CGAGGCTG-ACTGCATA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_60]

description:
73_C4P47ANXX_TAAGGCGA-AAGGAGTA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_55]

description:
70_C4P47ANXX_CGAGGCTG-ACTGCATA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_62]

description:
70_C4P47ANXX_CGAGGCTG-ACTGCATA_L001
processed data file:
counts.Unfiltered.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_108]

description:
6_C4P47ANXX_TAGGCATG-GCGTAAGA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_60]

description:
6_C4P47ANXX_TAGGCATG-GCGTAAGA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_57]

description:
70_C4P47ANXX_CGAGGCTG-ACTGCATA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_65]

description:
73_C4P47ANXX_TAAGGCGA-AAGGAGTA_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_54]

description:
6_C4P47ANXX_TAGGCATG-GCGTAAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_46]

description:
6_C4P47ANXX_TAGGCATG-GCGTAAGA_L004
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_56]

description:
6_C4P47ANXX_TAGGCATG-GCGTAAGA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_106]

description:
69_C4P47ANXX_GCTACGCT-ACTGCATA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_107]

description:
69_C4P47ANXX_GCTACGCT-ACTGCATA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_45]

description:
69_C4P47ANXX_GCTACGCT-ACTGCATA_L004
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_61]

description:
6_C4P47ANXX_TAGGCATG-GCGTAAGA_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_59]

description:
69_C4P47ANXX_GCTACGCT-ACTGCATA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_55]

description:
69_C4P47ANXX_GCTACGCT-ACTGCATA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_105]

description:
68_C4P47ANXX_CAGAGAGG-ACTGCATA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_53]

description:
69_C4P47ANXX_GCTACGCT-ACTGCATA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_58]

description:
68_C4P47ANXX_CAGAGAGG-ACTGCATA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_43]

description:
67_C4P47ANXX_CTCTCTAC-ACTGCATA_L004
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_54]

description:
68_C4P47ANXX_CAGAGAGG-ACTGCATA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_44]

description:
68_C4P47ANXX_CAGAGAGG-ACTGCATA_L004
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_57]

description:
67_C4P47ANXX_CTCTCTAC-ACTGCATA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_52]

description:
68_C4P47ANXX_CAGAGAGG-ACTGCATA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_59]

description:
67_C4P47ANXX_CTCTCTAC-ACTGCATA_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_51]

description:
67_C4P47ANXX_CTCTCTAC-ACTGCATA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_104]

description:
66_C4P47ANXX_TAGGCATG-ACTGCATA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_60]

description:
68_C4P47ANXX_CAGAGAGG-ACTGCATA_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_50]

description:
66_C4P47ANXX_TAGGCATG-ACTGCATA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_56]

description:
66_C4P47ANXX_TAGGCATG-ACTGCATA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_58]

description:
66_C4P47ANXX_TAGGCATG-ACTGCATA_L001
processed data file:
counts.Unfiltered.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_103]

description:
65_C4P47ANXX_GGACTCCT-ACTGCATA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_53]

description:
66_C4P47ANXX_TAGGCATG-ACTGCATA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_102]

description:
65_C4P47ANXX_GGACTCCT-ACTGCATA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_52]

description:
65_C4P47ANXX_GGACTCCT-ACTGCATA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_55]

description:
65_C4P47ANXX_GGACTCCT-ACTGCATA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_49]

description:
65_C4P47ANXX_GGACTCCT-ACTGCATA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_100]

description:
64_C4P47ANXX_TCCTGAGC-ACTGCATA_L006
processed data file:
counts.Unfiltered.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_57]

description:
65_C4P47ANXX_GGACTCCT-ACTGCATA_L001
processed data file:
counts.Unfiltered.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_101]

description:
64_C4P47ANXX_TCCTGAGC-ACTGCATA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_48]

description:
64_C4P47ANXX_TCCTGAGC-ACTGCATA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_51]

description:
64_C4P47ANXX_TCCTGAGC-ACTGCATA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_98]

description:
63_C4P47ANXX_AGGCAGAA-ACTGCATA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_99]

description:
63_C4P47ANXX_AGGCAGAA-ACTGCATA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_47]

description:
63_C4P47ANXX_AGGCAGAA-ACTGCATA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_54]

description:
63_C4P47ANXX_AGGCAGAA-ACTGCATA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_50]

description:
63_C4P47ANXX_AGGCAGAA-ACTGCATA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_97]

description:
62_C4P47ANXX_CGTACTAG-ACTGCATA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_56]

description:
63_C4P47ANXX_AGGCAGAA-ACTGCATA_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_53]

description:
62_C4P47ANXX_CGTACTAG-ACTGCATA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_46]

description:
62_C4P47ANXX_CGTACTAG-ACTGCATA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_95]

description:
61_C4P47ANXX_TAAGGCGA-ACTGCATA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_42]

description:
61_C4P47ANXX_TAAGGCGA-ACTGCATA_L004
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_55]

description:
62_C4P47ANXX_CGTACTAG-ACTGCATA_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_49]

description:
62_C4P47ANXX_CGTACTAG-ACTGCATA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_96]

description:
62_C4P47ANXX_CGTACTAG-ACTGCATA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_94]

description:
61_C4P47ANXX_TAAGGCGA-ACTGCATA_L006
processed data file:
counts.Unfiltered.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_52]

description:
60_C4P47ANXX_GTAGAGGA-GTAAGGAG_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_45]

description:
60_C4P47ANXX_GTAGAGGA-GTAAGGAG_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_54]

description:
61_C4P47ANXX_TAAGGCGA-ACTGCATA_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_93]

description:
5_C4P47ANXX_GGACTCCT-GCGTAAGA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_53]

description:
60_C4P47ANXX_GTAGAGGA-GTAAGGAG_L001
processed data file:
counts.Unfiltered.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_51]

description:
5_C4P47ANXX_GGACTCCT-GCGTAAGA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_48]

description:
61_C4P47ANXX_TAAGGCGA-ACTGCATA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_52]

description:
5_C4P47ANXX_GGACTCCT-GCGTAAGA_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_50]

description:
59_C4P47ANXX_AAGAGGCA-GTAAGGAG_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_44]

description:
59_C4P47ANXX_AAGAGGCA-GTAAGGAG_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_46]

description:
59_C4P47ANXX_AAGAGGCA-GTAAGGAG_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_40]

description:
58_C4P47ANXX_CGAGGCTG-GTAAGGAG_L004
processed data file:
counts.Unfiltered.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_90]

description:
58_C4P47ANXX_CGAGGCTG-GTAAGGAG_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_49]

description:
58_C4P47ANXX_CGAGGCTG-GTAAGGAG_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_92]

description:
59_C4P47ANXX_AAGAGGCA-GTAAGGAG_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_43]

description:
58_C4P47ANXX_CGAGGCTG-GTAAGGAG_L003
processed data file:
counts.Unfiltered.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_45]

description:
58_C4P47ANXX_CGAGGCTG-GTAAGGAG_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_89]

description:
57_C4P47ANXX_GCTACGCT-GTAAGGAG_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_44]

description:
57_C4P47ANXX_GCTACGCT-GTAAGGAG_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_87]

description:
56_C4P47ANXX_CAGAGAGG-GTAAGGAG_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_50]

description:
57_C4P47ANXX_GCTACGCT-GTAAGGAG_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_88]

description:
57_C4P47ANXX_GCTACGCT-GTAAGGAG_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_42]

description:
57_C4P47ANXX_GCTACGCT-GTAAGGAG_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_86]

description:
56_C4P47ANXX_CAGAGAGG-GTAAGGAG_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_47]

description:
56_C4P47ANXX_CAGAGAGG-GTAAGGAG_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_47]

description:
60_C4P47ANXX_GTAGAGGA-GTAAGGAG_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_91]

description:
59_C4P47ANXX_AAGAGGCA-GTAAGGAG_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_41]

description:
5_C4P47ANXX_GGACTCCT-GCGTAAGA_L004
processed data file:
counts.Unfiltered.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_41]

description:
56_C4P47ANXX_CAGAGAGG-GTAAGGAG_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_46]

description:
55_C4P47ANXX_CTCTCTAC-GTAAGGAG_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_85]

description:
55_C4P47ANXX_CTCTCTAC-GTAAGGAG_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_40]

description:
55_C4P47ANXX_CTCTCTAC-GTAAGGAG_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_84]

description:
55_C4P47ANXX_CTCTCTAC-GTAAGGAG_L006
processed data file:
counts.Unfiltered.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_42]

description:
55_C4P47ANXX_CTCTCTAC-GTAAGGAG_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_48]

description:
55_C4P47ANXX_CTCTCTAC-GTAAGGAG_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_51]

description:
59_C4P47ANXX_AAGAGGCA-GTAAGGAG_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_45]

description:
54_C4P47ANXX_TAGGCATG-GTAAGGAG_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_39]

description:
54_C4P47ANXX_TAGGCATG-GTAAGGAG_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_82]

description:
54_C4P47ANXX_TAGGCATG-GTAAGGAG_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_47]

description:
54_C4P47ANXX_TAGGCATG-GTAAGGAG_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_81]

description:
53_C4P47ANXX_GGACTCCT-GTAAGGAG_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_83]

description:
54_C4P47ANXX_TAGGCATG-GTAAGGAG_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_80]

description:
53_C4P47ANXX_GGACTCCT-GTAAGGAG_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_48]

description:
57_C4P47ANXX_GCTACGCT-GTAAGGAG_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_44]

description:
53_C4P47ANXX_GGACTCCT-GTAAGGAG_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_49]

description:
56_C4P47ANXX_CAGAGAGG-GTAAGGAG_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_78]

description:
52_C4P47ANXX_TCCTGAGC-GTAAGGAG_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_43]

description:
52_C4P47ANXX_TCCTGAGC-GTAAGGAG_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_37]

description:
52_C4P47ANXX_TCCTGAGC-GTAAGGAG_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_45]

description:
52_C4P47ANXX_TCCTGAGC-GTAAGGAG_L001
processed data file:
counts.Unfiltered.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_42]

description:
51_C4P47ANXX_AGGCAGAA-GTAAGGAG_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_40]

description:
51_C4P47ANXX_AGGCAGAA-GTAAGGAG_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_41]

description:
50_C4P47ANXX_CGTACTAG-GTAAGGAG_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_76]

description:
50_C4P47ANXX_CGTACTAG-GTAAGGAG_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_35]

description:
50_C4P47ANXX_CGTACTAG-GTAAGGAG_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_43]

description:
56_C4P47ANXX_CAGAGAGG-GTAAGGAG_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_46]

description:
53_C4P47ANXX_GGACTCCT-GTAAGGAG_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_39]

description:
50_C4P47ANXX_CGTACTAG-GTAAGGAG_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_38]

description:
53_C4P47ANXX_GGACTCCT-GTAAGGAG_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_75]

description:
4_C4P47ANXX_TCCTGAGC-GCGTAAGA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_38]

description:
51_C4P47ANXX_AGGCAGAA-GTAAGGAG_L004
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_34]

description:
4_C4P47ANXX_TCCTGAGC-GCGTAAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_40]

description:
4_C4P47ANXX_TCCTGAGC-GCGTAAGA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_42]

description:
4_C4P47ANXX_TCCTGAGC-GCGTAAGA_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_38]

description:
4_C4P47ANXX_TCCTGAGC-GCGTAAGA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_73]

description:
49_C4P47ANXX_TAAGGCGA-GTAAGGAG_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_41]

description:
52_C4P47ANXX_TCCTGAGC-GTAAGGAG_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_79]

description:
52_C4P47ANXX_TCCTGAGC-GTAAGGAG_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_37]

description:
49_C4P47ANXX_TAAGGCGA-GTAAGGAG_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_41]

description:
49_C4P47ANXX_TAAGGCGA-GTAAGGAG_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_39]

description:
52_C4P47ANXX_TCCTGAGC-GTAAGGAG_L004
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_36]

description:
51_C4P47ANXX_AGGCAGAA-GTAAGGAG_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_38]

description:
48_C4P47ANXX_GTAGAGGA-AGAGTAGA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_36]

description:
48_C4P47ANXX_GTAGAGGA-AGAGTAGA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_72]

description:
47_C4P47ANXX_AAGAGGCA-AGAGTAGA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_71]

description:
47_C4P47ANXX_AAGAGGCA-AGAGTAGA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_36]

description:
47_C4P47ANXX_AAGAGGCA-AGAGTAGA_L004
processed data file:
counts.Unfiltered.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_37]

description:
47_C4P47ANXX_AAGAGGCA-AGAGTAGA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_33]

description:
47_C4P47ANXX_AAGAGGCA-AGAGTAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_35]

description:
47_C4P47ANXX_AAGAGGCA-AGAGTAGA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_43]

description:
50_C4P47ANXX_CGTACTAG-GTAAGGAG_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_70]

description:
46_C4P47ANXX_CGAGGCTG-AGAGTAGA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_77]

description:
51_C4P47ANXX_AGGCAGAA-GTAAGGAG_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_36]

description:
46_C4P47ANXX_CGAGGCTG-AGAGTAGA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_35]

description:
46_C4P47ANXX_CGAGGCTG-AGAGTAGA_L004
processed data file:
counts.Unfiltered.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_34]

description:
46_C4P47ANXX_CGAGGCTG-AGAGTAGA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_39]

description:
46_C4P47ANXX_CGAGGCTG-AGAGTAGA_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_32]

description:
46_C4P47ANXX_CGAGGCTG-AGAGTAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_69]

description:
45_C4P47ANXX_GCTACGCT-AGAGTAGA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_39]

description:
49_C4P47ANXX_TAAGGCGA-GTAAGGAG_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_35]

description:
45_C4P47ANXX_GCTACGCT-AGAGTAGA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_74]

description:
4_C4P47ANXX_TCCTGAGC-GCGTAAGA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_37]

description:
48_C4P47ANXX_GTAGAGGA-AGAGTAGA_L004
processed data file:
counts.Unfiltered.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_40]

description:
47_C4P47ANXX_AAGAGGCA-AGAGTAGA_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_33]

description:
45_C4P47ANXX_GCTACGCT-AGAGTAGA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_38]

description:
45_C4P47ANXX_GCTACGCT-AGAGTAGA_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_67]

description:
44_C4P47ANXX_CAGAGAGG-AGAGTAGA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_34]

description:
45_C4P47ANXX_GCTACGCT-AGAGTAGA_L004
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_66]

description:
44_C4P47ANXX_CAGAGAGG-AGAGTAGA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_33]

description:
44_C4P47ANXX_CAGAGAGG-AGAGTAGA_L004
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_34]

description:
44_C4P47ANXX_CAGAGAGG-AGAGTAGA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_44]

description:
51_C4P47ANXX_AGGCAGAA-GTAAGGAG_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_68]

description:
45_C4P47ANXX_GCTACGCT-AGAGTAGA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_37]

description:
44_C4P47ANXX_CAGAGAGG-AGAGTAGA_L001
processed data file:
counts.Unfiltered.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_65]

description:
43_C4P47ANXX_CTCTCTAC-AGAGTAGA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_33]

description:
43_C4P47ANXX_CTCTCTAC-AGAGTAGA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_32]

description:
43_C4P47ANXX_CTCTCTAC-AGAGTAGA_L004
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_32]

description:
43_C4P47ANXX_CTCTCTAC-AGAGTAGA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_31]

description:
43_C4P47ANXX_CTCTCTAC-AGAGTAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_63]

description:
42_C4P47ANXX_TAGGCATG-AGAGTAGA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_31]

description:
42_C4P47ANXX_TAGGCATG-AGAGTAGA_L004
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_36]

description:
43_C4P47ANXX_CTCTCTAC-AGAGTAGA_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_32]

description:
42_C4P47ANXX_TAGGCATG-AGAGTAGA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_62]

description:
42_C4P47ANXX_TAGGCATG-AGAGTAGA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_31]

description:
42_C4P47ANXX_TAGGCATG-AGAGTAGA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_35]

description:
42_C4P47ANXX_TAGGCATG-AGAGTAGA_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_61]

description:
41_C4P47ANXX_GGACTCCT-AGAGTAGA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_31]

description:
41_C4P47ANXX_GGACTCCT-AGAGTAGA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_29]

description:
41_C4P47ANXX_GGACTCCT-AGAGTAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_60]

description:
40_C4P47ANXX_TCCTGAGC-AGAGTAGA_L007
processed data file:
counts.Unfiltered.3.0.txt


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_30]

description:
41_C4P47ANXX_GGACTCCT-AGAGTAGA_L004
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_30]

description:
42_C4P47ANXX_TAGGCATG-AGAGTAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_34]

description:
41_C4P47ANXX_GGACTCCT-AGAGTAGA_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_30]

description:
41_C4P47ANXX_GGACTCCT-AGAGTAGA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_29]

description:
40_C4P47ANXX_TCCTGAGC-AGAGTAGA_L004
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_59]

description:
40_C4P47ANXX_TCCTGAGC-AGAGTAGA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_64]

description:
43_C4P47ANXX_CTCTCTAC-AGAGTAGA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_33]

description:
40_C4P47ANXX_TCCTGAGC-AGAGTAGA_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_29]

description:
40_C4P47ANXX_TCCTGAGC-AGAGTAGA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_29]

description:
3_C4P47ANXX_AGGCAGAA-GCGTAAGA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_57]

description:
3_C4P47ANXX_AGGCAGAA-GCGTAAGA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_58]

description:
3_C4P47ANXX_AGGCAGAA-GCGTAAGA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_28]

description:
3_C4P47ANXX_AGGCAGAA-GCGTAAGA_L004
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_28]

description:
3_C4P47ANXX_AGGCAGAA-GCGTAAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_28]

description:
3_C4P47ANXX_AGGCAGAA-GCGTAAGA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_32]

description:
3_C4P47ANXX_AGGCAGAA-GCGTAAGA_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_56]

description:
39_C4P47ANXX_AGGCAGAA-AGAGTAGA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_55]

description:
39_C4P47ANXX_AGGCAGAA-AGAGTAGA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_30]

description:
40_C4P47ANXX_TCCTGAGC-AGAGTAGA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Endothelium (Endo) E8.5 [E8.5 Endo_27]

description:
39_C4P47ANXX_AGGCAGAA-AGAGTAGA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_28]

description:
39_C4P47ANXX_AGGCAGAA-AGAGTAGA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_27]

description:
39_C4P47ANXX_AGGCAGAA-AGAGTAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_31]

description:
39_C4P47ANXX_AGGCAGAA-AGAGTAGA_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_53]

description:
38_C4P47ANXX_CGTACTAG-AGAGTAGA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_54]

description:
38_C4P47ANXX_CGTACTAG-AGAGTAGA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_27]

description:
38_C4P47ANXX_CGTACTAG-AGAGTAGA_L004
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_27]

description:
38_C4P47ANXX_CGTACTAG-AGAGTAGA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: sh-2

type: RNA

city: Guangzhou

first: Ziqing

last: Yang

address: 26th Yuancun Erheng Road, Tianhe District

department: Guangdong Provincial Key laboratory of Colorectal and Pelvic Floor Disease

country: China

institute: Sun Yat-sen University

hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.

scan_protocol: GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.

data_processing: The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.

label: biotin

organism: Homo sapiens

label_protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

growth_protocol: DLD1 cells were obtained from KCLB, and maintained at 37℃ and 5% CO2. Cells were maintained in Dulbecco modified Eagle medium media supplemented with 10% (v/v) fetal bovine serum (FBS).

extract_protocol: Trizol extraction of total RNA was performed according to the manufacturer's instructions.

treatment_protocol: We screened four hairpin shRNAs targeting human ACTL6A transcripts and found shBAF53A-1 and shBAF53A-2 that reduced mRNA levels by >70%. The shRNA was in the pLKO.1 vector.Cells were infected twice with culture medium containing 2ml lentivirus expressing shBAF53A-1 and shBAF53A-2, 200ul FBS and 5 mg/ml polybrene (Sigma) at 37℃ for 24 hr and 48 hr. To increase the knockdown efficiency, infected cells were under several days of puromycin selection.

tag: cell line

value: colorectal cancer cell line

tag: genotype


title: sh-1


title: 9_CARIT

city: Epalinges

first: Grégory

last: Verdeil

state: Vaud

address: Chemin des Boveresses 155

department: Department of Oncology

country: Switzerland

institute: University of Lausanne

data_processing:
Transcript quantification was performed from fastq files using Salmon v 0.14.1
Target transcripts were set based on a GRCm38.p6 transcriptome index, built using salmond index.
Quantification was performed in quasi-mapping-based mode (parameters --validateMappings --fldMean 200 --fldSD 30 --seqBias --gcBias)
Assembly: mm10
Supplementary files format and content: Tab-delimited text files with estimate of relative abundance in Transcripts Per Million (TPM)

source_name: tumor

growth_protocol: P511 and primary T cells were cultured in complete RPMI 1640 GlutaMAXTM-I.

extract_protocol:
Sorted CD8 T cells from the tumor were collected in RNA later buffer and centrifuged for 5 minutes at maximum speed and RNA was extracted with the RNeasy Plus Micro Kit (Qiagen) following the manufacturer’s recommendations. For RNA sequencing, RNA quality was measured with a fragment analyzer.
RNA libraries were prepared for sequencing using standard Illumina protocols, Clontech RNA-seq

treatment_protocol: P511 tumors were cut into pieces and digested with 1mg/ml collagenase I and 100μg/ml DNAse (Sigma) for 30 minutes at 37°C. Tumors were passed through a 70μm cell strainer (Falcon). T cells from P511 were isolated with a Ficoll gradient (Fresenius Kabi Norge AS).

tag: strain

tag: tissue

value: tumor

tag: tumor cell_line

tag: t cell_type

value: TCRP1A CD8 T cells infiltrating P511 tumor

tag: treatment

value: Overexpression of NFAT1 CARIT


title: 10_CARIT


title: 8_NFA

value: Overexpression of NFAT5


title: Endothelium (Endo) E8.5 [E8.5 Endo_26]

description:
38_C4P47ANXX_CGTACTAG-AGAGTAGA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: 7_eGFP

value: Overexpression of eGFP (control vector)


title: HT-29 cells treatment CX-5461 1uM

city: Taipei

first: Michael

last: Hsiao

address: Academia Road, Section 2, Nankang, Taipei, 115, Ta

department: Genomics Research Center

country: Taiwan

institute: Academia Sinica

hyb_protocol: Following fragmentation, 20 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix Human Genome U133 PLUS 2.0 . GeneChips were washed and stained in the Affymetrix Fluidics Station 400.

scan_protocol: GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.

data_processing: We normalize all chips in the same set and go through the log2 normalized RMA algorithm.

source_name: colorectal cancer cell

growth_protocol: DLD-1 and HT-29 cells were cultured in 5% CO2 incubator at 37℃ and SW480 cells was cultured in CO2-free incubator at 37℃.

extract_protocol: Qiagene RNeasy mini kit extraction of total RNA was performed according to the manufacturer's instructions.

value: HT-29 cells

value: colorectal adenocarcinoma


title: 6_eGFP


title: HT-29 cells treatment solvent control

value: control


title: SW480 cells treatment CX-5461 1uM

value: SW-480 cells


title: scramble-2

value: scramble RNA


title: SW480 cells treatment CX-5461 10uM


title: DLD-1 cells treatment CX-5461 1uM

value: DLD-1 cells


title: DLD-1 cells treatment solvent control


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_30]

description:
38_C4P47ANXX_CGTACTAG-AGAGTAGA_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt

value: Yolk sac


title: SW480 cells treatment solvent control


title: scramble-1


title: HT-29 cells treatment CX-5461 10uM


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_26]

description:
37_C4P47ANXX_TAAGGCGA-AGAGTAGA_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: 3_eGFP


title: 5_NFA


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_50]

description:
36_C4P47ANXX_GTAGAGGA-TATCCTCT_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_51]

description:
37_C4P47ANXX_TAAGGCGA-AGAGTAGA_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_52]

description:
37_C4P47ANXX_TAAGGCGA-AGAGTAGA_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: 4_CARIT


title: 2_CARIT


title: 679_6KO

growth_protocol: B16-gp33 were cultured in complete DMEM GlutaMAXTM-I with 100μg/ml G418 (Calbiochem). Primary T cells were cultured in complete RPMI 1640 GlutaMAXTM-I.

extract_protocol:
Sorted CD8 T cells from the tumor were collected in RNA later buffer and centrifuged for 5 minutes at maximum speed and RNA was extracted with the RNeasy Plus Micro Kit (Qiagen) following the manufacturer’s recommendations. For RNA sequencing, RNA quality was measured with a fragment analyzer.
RNA libraries were prepared for sequencing using standard Illumina protocols, Nextera XT DNA

treatment_protocol: Tumor tissue was passed through a 70um cell strainer to obtain a single cell suspension. Percoll gradient centrifugation (40%/70%) was used to enrich in leukocytes. Cells were sained in SORT buffer.

value: B16-gp33 melanoma

value: P14 CD8 T cells infiltraing B16-gp33 melanoma

value: NFAT5 KO

value: 48h activation in vitro following transfer of 5 Mio T cell into tumor bearing mice


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_26]

description:
37_C4P47ANXX_TAAGGCGA-AGAGTAGA_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt

value: yolk sac EMP


title: DLD-1 cells treatment CX-5461 10uM


title: Endothelium (Endo) E8.5 [E8.5 Endo_25]

description:
37_C4P47ANXX_TAAGGCGA-AGAGTAGA_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt

value: yolk sac endothelium


title: 1_NFA

value: tumor

value: TCRP1A CD8 T cells infiltrating P511 tumor


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_29]

description:
37_C4P47ANXX_TAAGGCGA-AGAGTAGA_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt

value: yolk sac erythrocytes


title: 679_2KO


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_26]

description:
37_C4P47ANXX_TAAGGCGA-AGAGTAGA_L004
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt

value: yolk sac Mk


title: Endothelium (Endo) E8.5 [E8.5 Endo_24]

description:
36_C4P47ANXX_GTAGAGGA-TATCCTCT_L002
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_25]

description:
36_C4P47ANXX_GTAGAGGA-TATCCTCT_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: 679_4WT

value: WT


title: 679_3WT


title: 679_5WT


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_25]

description:
36_C4P47ANXX_GTAGAGGA-TATCCTCT_L004
processed data file:
counts.Unfiltered.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_25]

description:
36_C4P47ANXX_GTAGAGGA-TATCCTCT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: 678_6KO


title: 678_5KO


title: 678_2WT


title: 678_3KO


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_28]

description:
36_C4P47ANXX_GTAGAGGA-TATCCTCT_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: 678_4WT


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_49]

description:
35_C4P47ANXX_AAGAGGCA-TATCCTCT_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt

value: yolk sac mesoderm


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_48]

description:
35_C4P47ANXX_AAGAGGCA-TATCCTCT_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_24]

description:
35_C4P47ANXX_AAGAGGCA-TATCCTCT_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_24]

description:
35_C4P47ANXX_AAGAGGCA-TATCCTCT_L004
processed data file:
counts.Unfiltered.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_24]

description:
35_C4P47ANXX_AAGAGGCA-TATCCTCT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_47]

description:
34_C4P47ANXX_CGAGGCTG-TATCCTCT_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_23]

description:
34_C4P47ANXX_CGAGGCTG-TATCCTCT_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_46]

description:
34_C4P47ANXX_CGAGGCTG-TATCCTCT_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_26]

description:
34_C4P47ANXX_CGAGGCTG-TATCCTCT_L001
processed data file:
counts.Unfiltered.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_45]

description:
33_C4P47ANXX_GCTACGCT-TATCCTCT_L007
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_23]

description:
34_C4P47ANXX_CGAGGCTG-TATCCTCT_L004
processed data file:
counts.Unfiltered.3.0.txt


title: WT Th17 rep2 INPUT

city: La Jolla

first: Gene

last: Yeo

state: CA

address: 2880 Torrey Pines Scenic Dr. Room 3805/Yeo Lab

country: USA

institute: UCSD

description:
eCLIP
Rep2 INPUT

data_processing:
Sequenced reads were removed of inline barcodes and reformatted to include randomers in read headers with eclipdemux (v0.0.1). Args: --length 10
Reads were then trimmed with cutadapt (1.9.1). Args: --match-read-wildcards -O 1 --times 1 -e 0.1 --quality-cutoff 6 -m 18 -g g_adapters.fasta -A A_adapters.fasta -a a_adapters.fasta (fasta sequences generated from parsebarcodes.sh within the eclip 0.1.5+ pipeline)
Reads were then trimmed once more with cutadapt (1.9.1) to remove double-ligation events. Args: --match-read-wildcards -O 1 --times 1 -e 0.1 --quality-cutoff 6 -m 18 -A A_adapters.fasta (fasta sequences generated from parsebarcodes.sh within the eclip 0.1.5+ pipeline)
Trimmed reads were then mapped with STAR (2.4.0i) against a mouse-specific repeat element database (RepBase 18.05). Args: --runThreadN 16 \  --genomeDir mouse_repbase \  --readFilesIn path/to/read1 path/to/read2 \  --outFileNamePrefix out_prefix \  --outReadsUnmapped Fastx \  --outSAMtype BAM Unsorted \  --outSAMattributes All \  --outSAMunmapped Within \  --outSAMattrRGline ID:foo \  --outFilterType BySJout \  --outFilterMultimapNmax 30 \  --outFilterMultimapScoreRange 1 \  --outFilterScoreMin 10 \  --alignEndsType EndToEnd
Unmapped reads filtered of repeat elements were then mapped with STAR (2.4.0i) against a mouse genome (mm10). Args: --runThreadN 16 \  --genomeDir genomedir \  --readFilesIn /path/to/read1 /path/to/read2 \  --outFileNamePrefix out_prefix \  --outReadsUnmapped Fastx \  --outSAMtype BAM   Unsorted \  --outSAMattributes All \  --outSAMunmapped Within \  --outSAMattrRGline ID:foo \  --outFilterType BySJout \  --outFilterMultimapNmax 1 \  --outFilterMultimapScoreRange 1 \  --outFilterScoreMin 10 \  --alignEndsType EndToEnd
Aligned reads were sorted with samtools (1.4.1)
Sorted reads were collapsed with barcodecollapsepe.py included in eclip 0.1.5+ pipelines. Args: -o preRmDup.bam -m metrics_file -b rmDup.bam
PCR de-duped reads from each inline barcode were then merged with samtools (1.4.1) merge (merged.bam)
Merged alignments were split to keep just read2 using samtools (1.4.1) view. Args: -h -b -f 128
Read2 BAM files were used to identify peak clusters with Clipper (1.2.2). Args: --species mm10 --bam path/to/input.bam --timeout 3600000 --maxgenes 1000000 --save-pickle --outfile path/to/output.bam
Peak clusters were normalized using read2 BAM files for IP against read2 BAM files for INPUT with peaksnormalize.pl (overlap_peakfi_with_bam_PE.pl), included in eclip 0.1.5+.
Overlapping normalized peak regions were merged with compress_l2foldenrpeakfi_for_replicate_overlapping_bedformat.pl, included within eclip-0.1.5+
Normalized peak files were ranked by entropy score (make_informationcontent_from_peaks.pl included within the merge_peaks pipeline) and used as inputs to IDR (2.0.2) to determine reproducible peaks.
Reproducible peaks were annotated by overlapping peak regions with Gencode M10 annotations
Genome_build: mm10
Supplementary_files_format_and_content: bigWig files; tab-delimited text file includes -log10pValues and Log2FoldChange values for each IDR peaks called after cutoff of 3,3 in each parameter

growth_protocol: Th17 cells were polarized from naïve CD4 T cells obtained from 8wk old female mice and treated with anti-CD3, anti-CD28, IL6, and TGFb for 72hrs in culture.

extract_protocol:
RNA was harvested using Trizol reagent.
Illumina TruSeq RNA Sample Prep Kit (Cat#FC-122-1001) was used.
eCLIPseq

treatment_protocol: UV-mediated crosslinking, lysis, and treatment with limiting amounts of RNases, followed by immunoprecipitation (IP) of the DDX5 containing RNA complexes. RNA fragments protected from RNase digestion were subjected to RNA linker ligation, reverse-transcription and DNA linker ligation to generate eCLIP libraries for high-throughput Illumina sequencing.

tag: chip antibody

value: wild type


title: Erythro-Myeloid Progenitors (EMP) E8.5 [E8.5 HPC_22]

description:
33_C4P47ANXX_GCTACGCT-TATCCTCT_L005
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Megakaryocytes (Mk) E8.5 [E8.5 PreDPFC_22]

description:
33_C4P47ANXX_GCTACGCT-TATCCTCT_L004
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Erythro-Myeloid Progenitors (EMP) E8.25 [E8.5 PreHPC_23]

description:
33_C4P47ANXX_GCTACGCT-TATCCTCT_L003
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Flk1-GFP+ E7.25 extraembryonic mesoderm [E7.5 Flk1_43]

description:
32_C4P47ANXX_CAGAGAGG-TATCCTCT_L006
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt


title: Primitive erythrocytes (EryP) E8.5 [E8.5 EryP_25]

description:
33_C4P47ANXX_GCTACGCT-TATCCTCT_L001
processed data file:
counts.Unfiltered.3.0.txt
counts.3.0.txt
cpm.Size.3.0.txt