title: CER67Con8wk

description: mock injected 8 weeks replicate 2


title: CER66Con8wk

status: Public on Dec 15 2022

type: SRA

city: Memphis

first: Yong-Dong

last: Wang

state: TN

address: 262 Danny Thomas Pl, MS1135

country: USA

institute: St. Jude Children's Research Hospital

description: mock injected 8 weeks replicate 1

library_source: transcriptomic

data_processing:
Illumina Casava1.8 software used for basecalling.
Sequenced reads were trimmed for adaptor sequence and low-quality sequence, then mapped to mm10 whole genome using CLC Genomic Workbench RNA seq tool. TPM for transcripts were reported.
Genome_build: mm10
Supplementary_files_format_and_content: tab-delimited text files include TPM values for all 62 samples

molecule: total RNA

organism: Mus musculus

source_name: cerebellum from female C57BL/6J mice

extract_protocol:
Tissues were homogenized in Trizol and RNA extracted by isopropanol precipitation from the aqueous phase. RNA sequencing was performed as previously described from the  time points of 3 week post LLC cell injection
For sequencing, biological replicates were prepared with the TruSeq stranded mRNA library prep kit (Illumina) and sequenced on the Illumina NovaSeq 6000 platform.

tag: strain

tag: Sex

value: female

tag: tissue

value: cerebellum

tag: age

value: 2 months

tag: treatment

value: cachectic melanoma cells

tag: timepoint

value: 8 weeks


title: 3mix-target, 3mix-target-plate1_69

city: Suita

first: Katsuyuki

last: Shiroguchi

state: Osaka

address: 6-2-3 Furuedai

department: Center for Biosystems Dynamics Research (BDR)

country: Japan

institute: RIKEN

description:
3mix-target-plate1_69
3mix_RNA_expression.txt

data_processing:
Basecalls performed by Illumina MiSeq or Hiseq
Sequenced reads were trimmed for adaptor sequence, and were sorted by indexes in Illumina MiSeq or using bcl2fastq for Illumina Hiseq resultes
Reads were aligned to the mm10 genome assebly using STAR
Mapped reads seperated by genes, and the reads mapped for each gene were clusterd by molecular barcode
The number of cluteres for each gene was counted, which provides the number of molecules detected for each gene
Genome_build: mm10
Supplementary_files_format_and_content: The calculated copy number of RNA molecules per cell for each gene is listed (cells which were not filtered out are shown).

source_name: Cell line mixture of murine T cell, murine leukemia cell, and murine hematopoietic progenitor cell

extract_protocol:
RNAs from cell lysate in each well was directly used for library preparation without purification
Libraries were prepared by using molecular barcoding technique. First, for control, the same amount of spike-in RNAs, a known number of External RNA Controls Consortium (ERCC) RNA molecules, was added into every tube which contains an isolated cell. Then, the cells were lysed and RNA molecules were fragmentated by temperature elevation. cDNAs were generated by reverse transcription using a reverse transcription primer, in which the first common primer sequence, molecular barcode, fourteen T bases, and one V (A or G or C) base are tandemly arranged from 5' end. In the reverse transcription, the second common primer sequence was also attached to 3' end of each generated cDNA molecule by template switching. Subsequently, cDNAs were amplified by PCR using two primers; one primer contains an illumina adapter sequence, sample index, and the first common primer sequence, and the other primer has another illumina adapter sequence, sample index, and the second common primer sequence.

treatment_protocol: Murine T cells, leukemia cells, hematopoietic progenitor cells, and PBMCs were isolated by ALPS or FACS

tag: cell type

value: T cell

tag: isolation method

value: ALPS


title: 3mix-target, 3mix-target-plate1_68

description:
3mix-target-plate1_68
3mix_RNA_expression.txt


title: CER49NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 4


title: HIP5CAC2wk

description:
cachectic melanoma cells 2 weeks replicate 5
2139891_HIP5CAC2wk_S5

data_processing:
Illumina Casava1.8 software used for basecalling.
Sequenced reads were trimmed for adaptor sequence and low-quality sequence, then mapped to mm10 whole genome using CLC Genomic Workbench RNA seq tool. TPM for transcripts were reported.
Genome_build: mm10
Supplementary_files_format_and_content: tab-delimited text files include TPM values for all 60 samples

source_name: hippocampus from female C57BL/6J mice

value: hippocampus

tag: treatment/time point

value: cachectic melanoma cells 2 weeks


title: 3mix-target, 3mix-target-plate1_67

description:
3mix-target-plate1_67
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_65

description:
3mix-target-plate1_65
3mix_RNA_expression.txt


title: CER47NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 2


title: 3mix-target, 3mix-target-plate1_66

description:
3mix-target-plate1_66
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_64

description:
3mix-target-plate1_64
3mix_RNA_expression.txt


title: CER48NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 3


title: CER46NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 1


title: HIP4CAC2wk

description:
cachectic melanoma cells 2 weeks replicate 4
2139890_HIP4CAC2wk_S4


title: 3mix-target, 3mix-target-plate1_61

description:
3mix-target-plate1_61
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_63

description:
3mix-target-plate1_63
3mix_RNA_expression.txt


title: CER28CAC8wk

description: cachectic melanoma cells 8 weeks replicate 6


title: CER27CAC8wk

description: cachectic melanoma cells 8 weeks replicate 5


title: CER23CAC8wk

description: cachectic melanoma cells 8 weeks replicate 3


title: CER30CAC8wk

description: cachectic melanoma cells 8 weeks replicate 7


title: CER24CAC8wk

description: cachectic melanoma cells 8 weeks replicate 4


title: 3mix-target, 3mix-target-plate1_58

description:
3mix-target-plate1_58
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_59

description:
3mix-target-plate1_59
3mix_RNA_expression.txt


title: CER21CAC8wk

description: cachectic melanoma cells 8 weeks replicate 2


title: 3mix-target, 3mix-target-plate1_60

description:
3mix-target-plate1_60
3mix_RNA_expression.txt


title: CER50NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 5


title: CER19CAC8wk

description: cachectic melanoma cells 8 weeks replicate 1


title: 3mix-target, 3mix-target-plate1_56

description:
3mix-target-plate1_56
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_57

description:
3mix-target-plate1_57
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_54

description:
3mix-target-plate1_54
3mix_RNA_expression.txt


title: CER64Con6wk

description: mock injected 6 weeks replicate 4

value: 6 weeks


title: CER62Con6wk

description: mock injected 6 weeks replicate 2


title: CER63Con6wk

description: mock injected 6 weeks replicate 3


title: 3mix-target, 3mix-target-plate1_55

description:
3mix-target-plate1_55
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_52

description:
3mix-target-plate1_52
3mix_RNA_expression.txt


title: CER45NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 5


title: 3mix-target, 3mix-target-plate1_62

description:
3mix-target-plate1_62
3mix_RNA_expression.txt


title: CER44NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 4


title: 3mix-target, 3mix-target-plate1_49

description:
3mix-target-plate1_49
3mix_RNA_expression.txt


title: CER61Con6wk

description: mock injected 6 weeks replicate 1


title: 3mix-target, 3mix-target-plate1_53

description:
3mix-target-plate1_53
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_50

description:
3mix-target-plate1_50
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_48

description:
3mix-target-plate1_48
3mix_RNA_expression.txt


title: CER43NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 3


title: CER42NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 2


title: 3mix-target, 3mix-target-plate1_47

description:
3mix-target-plate1_47
3mix_RNA_expression.txt


title: CER41NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 1


title: CER65Con6wk

description: mock injected 6 weeks replicate 5


title: 3mix-target, 3mix-target-plate1_46

description:
3mix-target-plate1_46
3mix_RNA_expression.txt


title: CER12CAC6wk

description: cachectic melanoma cells 6 weeks replicate 2


title: CER14CAC6wk

description: cachectic melanoma cells 6 weeks replicate 4


title: 3mix-target, 3mix-target-plate1_43

description:
3mix-target-plate1_43
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_45

description:
3mix-target-plate1_45
3mix_RNA_expression.txt


title: CER13CAC6wk

description: cachectic melanoma cells 6 weeks replicate 3


title: 3mix-target, 3mix-target-plate1_44

description:
3mix-target-plate1_44
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_42

description:
3mix-target-plate1_42
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_51

description:
3mix-target-plate1_51
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_41

description:
3mix-target-plate1_41
3mix_RNA_expression.txt


title: CER11CAC6wk

description: cachectic melanoma cells 6 weeks replicate 1


title: 3mix-target, 3mix-target-plate1_40

description:
3mix-target-plate1_40
3mix_RNA_expression.txt


title: CER59Con4wk

description: mock injected 4 weeks replicate 4

value: 4 weeks


title: CER60Con4wk

description: mock injected 4 weeks replicate 5


title: CER58Con4wk

description: mock injected 4 weeks replicate 3


title: CER57Con4wk

description: mock injected 4 weeks replicate 2


title: 3mix-target, 3mix-target-plate1_38

description:
3mix-target-plate1_38
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_37

description:
3mix-target-plate1_37
3mix_RNA_expression.txt


title: CER40NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 5


title: CER56Con4wk

description: mock injected 4 weeks replicate 1


title: CER39NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 4


title: 3mix-target, 3mix-target-plate1_34

description:
3mix-target-plate1_34
3mix_RNA_expression.txt

value: leukemia cell


title: 3mix-target, 3mix-target-plate1_36

description:
3mix-target-plate1_36
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_35

description:
3mix-target-plate1_35
3mix_RNA_expression.txt


title: CER38NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 3


title: 3mix-target, 3mix-target-plate1_33

description:
3mix-target-plate1_33
3mix_RNA_expression.txt


title: CER15CAC6wk

description: cachectic melanoma cells 6 weeks replicate 5


title: CER37NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 2


title: CER36NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 1


title: 3mix-target, 3mix-target-plate1_32

description:
3mix-target-plate1_32
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_31

description:
3mix-target-plate1_31
3mix_RNA_expression.txt


title: CER9CAC4wk

description: cachectic melanoma cells 4 weeks replicate 4


title: 3mix-target, 3mix-target-plate1_30

description:
3mix-target-plate1_30
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_28

description:
3mix-target-plate1_28
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_39

description:
3mix-target-plate1_39
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_29

description:
3mix-target-plate1_29
3mix_RNA_expression.txt


title: CER7CAC4wk

description: cachectic melanoma cells 4 weeks replicate 2


title: 3mix-target, 3mix-target-plate1_26

description:
3mix-target-plate1_26
3mix_RNA_expression.txt


title: CER54Con2wk

description: mock injected 2 weeks replicate 4

value: 2 weeks


title: 3mix-target, 3mix-target-plate1_25

description:
3mix-target-plate1_25
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_24

description:
3mix-target-plate1_24
3mix_RNA_expression.txt


title: CER55Con2wk

description: mock injected 2 weeks replicate 5


title: 3mix-target, 3mix-target-plate1_23

description:
3mix-target-plate1_23
3mix_RNA_expression.txt


title: CER53Con2wk

description: mock injected 2 weeks replicate 3


title: 3mix-target, 3mix-target-plate1_22

description:
3mix-target-plate1_22
3mix_RNA_expression.txt


title: CER52Con2wk

description: mock injected 2 weeks replicate 2


title: CER51Con2wk

description: mock injected 2 weeks replicate 1


title: 3mix-target, 3mix-target-plate1_21

description:
3mix-target-plate1_21
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_20

description:
3mix-target-plate1_20
3mix_RNA_expression.txt


title: CER35NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 5


title: CER34NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 4


title: CER33NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 3


title: CER10CAC4wk

description: cachectic melanoma cells 4 weeks replicate 5


title: CER8CAC4wk

description: cachectic melanoma cells 4 weeks replicate 3


title: 3mix-target, 3mix-target-plate1_18

description:
3mix-target-plate1_18
3mix_RNA_expression.txt


title: CER32NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 2


title: CER5CAC2wk

description: cachectic melanoma cells 2 weeks replicate 5


title: 3mix-target, 3mix-target-plate1_27

description:
3mix-target-plate1_27
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_15

description:
3mix-target-plate1_15
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_17

description:
3mix-target-plate1_17
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_16

description:
3mix-target-plate1_16
3mix_RNA_expression.txt


title: CER4CAC2wk

description: cachectic melanoma cells 2 weeks replicate 4


title: 3mix-target, 3mix-target-plate1_14

description:
3mix-target-plate1_14
3mix_RNA_expression.txt


title: CER6CAC4wk

description: cachectic melanoma cells 4 weeks replicate 1


title: CER3CAC2wk

description: cachectic melanoma cells 2 weeks replicate 3


title: 3mix-target, 3mix-target-plate1_12

description:
3mix-target-plate1_12
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_11

description:
3mix-target-plate1_11
3mix_RNA_expression.txt


title: CER1CAC2wk

description: cachectic melanoma cells 2 weeks replicate 1


title: CER2CAC2wk

description: cachectic melanoma cells 2 weeks replicate 2


title: Gas70Con8wk

description: mock injected 8 weeks replicate 5

source_name: gastrocnemius skeletal muscle from female C57BL/6J mice

value: gastrocnemius skeletal muscle


title: 3mix-target, 3mix-target-plate1_10

description:
3mix-target-plate1_10
3mix_RNA_expression.txt


title: Gas69Con8wk

description: mock injected 8 weeks replicate 4


title: Gas68Con8wk

description: mock injected 8 weeks replicate 3


title: 3mix-target, 3mix-target-plate1_8

description:
3mix-target-plate1_8
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_9

description:
3mix-target-plate1_9
3mix_RNA_expression.txt


title: Gas66Con8wk

description: mock injected 8 weeks replicate 1


title: CER31NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 1


title: Gas50NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 5


title: 3mix-target, 3mix-target-plate1_6

description:
3mix-target-plate1_6
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_5

description:
3mix-target-plate1_5
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_19

description:
3mix-target-plate1_19
3mix_RNA_expression.txt


title: Gas48NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 3


title: 3mix-target, 3mix-target-plate1_3

description:
3mix-target-plate1_3
3mix_RNA_expression.txt


title: Gas47NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 2


title: 3mix-target, 3mix-target-plate1_4

description:
3mix-target-plate1_4
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_2

description:
3mix-target-plate1_2
3mix_RNA_expression.txt


title: Gas46NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 1


title: 3mix-target, 3mix-target-plate1_1

description:
3mix-target-plate1_1
3mix_RNA_expression.txt


title: 3mix-target, 3mix-target-plate1_13

description:
3mix-target-plate1_13
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_96

description:
3mix-random-plate4_96
3mix_RNA_expression.txt

value: random selection


title: Gas30CAC8wk

description: cachectic melanoma cells 8 weeks replicate 7


title: Gas24CAC8wk

description: cachectic melanoma cells 8 weeks replicate 4


title: Gas27CAC8wk

description: cachectic melanoma cells 8 weeks replicate 5


title: Gas28CAC8wk

description: cachectic melanoma cells 8 weeks replicate 6


title: Gas67Con8wk

description: mock injected 8 weeks replicate 2


title: Gas23CAC8wk

description: cachectic melanoma cells 8 weeks replicate 3


title: 3mix-target, 3mix-target-plate1_7

description:
3mix-target-plate1_7
3mix_RNA_expression.txt


title: Gas21CAC8wk

description: cachectic melanoma cells 8 weeks replicate 2


title: 3mix-random, 3mix-random-plate4_93

description:
3mix-random-plate4_93
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_95

description:
3mix-random-plate4_95
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_92

description:
3mix-random-plate4_92
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_91

description:
3mix-random-plate4_91
3mix_RNA_expression.txt


title: Gas19CAC8wk

description: cachectic melanoma cells 8 weeks replicate 1


title: 3mix-random, 3mix-random-plate4_94

description:
3mix-random-plate4_94
3mix_RNA_expression.txt


title: Gas49NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 4


title: Gas65Con6wk

description: mock injected 6 weeks replicate 5


title: Gas64Con6wk

description: mock injected 6 weeks replicate 4


title: 3mix-random, 3mix-random-plate4_89

description:
3mix-random-plate4_89
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_88

description:
3mix-random-plate4_88
3mix_RNA_expression.txt


title: Gas62Con6wk

description: mock injected 6 weeks replicate 2


title: 3mix-random, 3mix-random-plate4_87

description:
3mix-random-plate4_87
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_86

description:
3mix-random-plate4_86
3mix_RNA_expression.txt


title: Gas45NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 5


title: Gas61Con6wk

description: mock injected 6 weeks replicate 1


title: 3mix-random, 3mix-random-plate4_85

description:
3mix-random-plate4_85
3mix_RNA_expression.txt


title: Gas63Con6wk

description: mock injected 6 weeks replicate 3


title: 3mix-random, 3mix-random-plate4_84

description:
3mix-random-plate4_84
3mix_RNA_expression.txt


title: Gas44NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 4


title: 3mix-random, 3mix-random-plate4_83

description:
3mix-random-plate4_83
3mix_RNA_expression.txt


title: Gas41NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 1


title: Gas42NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 2


title: Gas15CAC6wk

description: cachectic melanoma cells 6 weeks replicate 5


title: 3mix-random, 3mix-random-plate4_82

description:
3mix-random-plate4_82
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_78

description:
3mix-random-plate4_78
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_77

description:
3mix-random-plate4_77
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_76

description:
3mix-random-plate4_76
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_81

description:
3mix-random-plate4_81
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_80

description:
3mix-random-plate4_80
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_90

description:
3mix-random-plate4_90
3mix_RNA_expression.txt


title: Gas14CAC6wk

description: cachectic melanoma cells 6 weeks replicate 4


title: 3mix-random, 3mix-random-plate4_79

description:
3mix-random-plate4_79
3mix_RNA_expression.txt


title: Gas60Con4wk

description: mock injected 4 weeks replicate 5


title: Gas13CAC6wk

description: cachectic melanoma cells 6 weeks replicate 3


title: Gas12CAC6wk

description: cachectic melanoma cells 6 weeks replicate 2


title: Gas11CAC6wk

description: cachectic melanoma cells 6 weeks replicate 1


title: Gas59Con4wk

description: mock injected 4 weeks replicate 4


title: Gas57Con4wk

description: mock injected 4 weeks replicate 2


title: 3mix-random, 3mix-random-plate4_74

description:
3mix-random-plate4_74
3mix_RNA_expression.txt


title: Gas58Con4wk

description: mock injected 4 weeks replicate 3


title: 3mix-random, 3mix-random-plate4_72

description:
3mix-random-plate4_72
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_75

description:
3mix-random-plate4_75
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_73

description:
3mix-random-plate4_73
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_71

description:
3mix-random-plate4_71
3mix_RNA_expression.txt


title: Gas56Con4wk

description: mock injected 4 weeks replicate 1


title: Gas43NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 3


title: Gas40NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 5


title: 3mix-random, 3mix-random-plate4_69

description:
3mix-random-plate4_69
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_70

description:
3mix-random-plate4_70
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_67

description:
3mix-random-plate4_67
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_68

description:
3mix-random-plate4_68
3mix_RNA_expression.txt


title: Gas38NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 3


title: Gas39NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 4


title: 3mix-random, 3mix-random-plate4_65

description:
3mix-random-plate4_65
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_66

description:
3mix-random-plate4_66
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_64

description:
3mix-random-plate4_64
3mix_RNA_expression.txt


title: Gas10CAC4wk

description: cachectic melanoma cells 4 weeks replicate 5


title: Gas37NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 2


title: Gas36NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 1


title: 3mix-random, 3mix-random-plate4_62

description:
3mix-random-plate4_62
3mix_RNA_expression.txt


title: Gas8CAC4wk

description: cachectic melanoma cells 4 weeks replicate 3


title: Gas7CAC4wk

description: cachectic melanoma cells 4 weeks replicate 2


title: Gas6CAC4wk

description: cachectic melanoma cells 4 weeks replicate 1


title: Gas9CAC4wk

description: cachectic melanoma cells 4 weeks replicate 4


title: 3mix-random, 3mix-random-plate4_61

description:
3mix-random-plate4_61
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_60

description:
3mix-random-plate4_60
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_59

description:
3mix-random-plate4_59
3mix_RNA_expression.txt


title: Gas54Con2wk

description: mock injected 2 weeks replicate 4


title: Gas53Con2wk

description: mock injected 2 weeks replicate 3


title: 3mix-random, 3mix-random-plate4_57

description:
3mix-random-plate4_57
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_56

description:
3mix-random-plate4_56
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_58

description:
3mix-random-plate4_58
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_54

description:
3mix-random-plate4_54
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_55

description:
3mix-random-plate4_55
3mix_RNA_expression.txt


title: Gas34NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 4


title: Gas33NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 3


title: Gas51Con2wk

description: mock injected 2 weeks replicate 1


title: 3mix-random, 3mix-random-plate4_63

description:
3mix-random-plate4_63
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_52

description:
3mix-random-plate4_52
3mix_RNA_expression.txt


title: Gas52Con2wk

description: mock injected 2 weeks replicate 2


title: 3mix-random, 3mix-random-plate4_53

description:
3mix-random-plate4_53
3mix_RNA_expression.txt


title: Gas32NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 2


title: Gas35NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 5


title: Gas31NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 1


title: 3mix-random, 3mix-random-plate4_51

description:
3mix-random-plate4_51
3mix_RNA_expression.txt


title: Gas5CAC2wk

description: cachectic melanoma cells 2 weeks replicate 5


title: Gas4CAC2wk

description: cachectic melanoma cells 2 weeks replicate 4


title: 3mix-random, 3mix-random-plate4_50

description:
3mix-random-plate4_50
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_49

description:
3mix-random-plate4_49
3mix_RNA_expression.txt


title: Gas3CAC2wk

description: cachectic melanoma cells 2 weeks replicate 3


title: 3mix-random, 3mix-random-plate4_48

description:
3mix-random-plate4_48
3mix_RNA_expression.txt


title: Gas2CAC2wk

description: cachectic melanoma cells 2 weeks replicate 2


title: 3mix-random, 3mix-random-plate4_47

description:
3mix-random-plate4_47
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_46

description:
3mix-random-plate4_46
3mix_RNA_expression.txt


title: Gas55Con2wk

description: mock injected 2 weeks replicate 5


title: Gas1CAC2wk

description: cachectic melanoma cells 2 weeks replicate 1


title: LIV70Con8wk

description: mock injected 8 weeks replicate 5

source_name: liver from female C57BL/6J mice

value: liver

value: mock injected

tag: time point


title: 3mix-random, 3mix-random-plate4_45

description:
3mix-random-plate4_45
3mix_RNA_expression.txt


title: LIV69Con8wk

description: mock injected 8 weeks replicate 4


title: 3mix-random, 3mix-random-plate4_43

description:
3mix-random-plate4_43
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_44

description:
3mix-random-plate4_44
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_42

description:
3mix-random-plate4_42
3mix_RNA_expression.txt


title: LIV67Con8wk

description: mock injected 8 weeks replicate 2


title: 3mix-random, 3mix-random-plate4_41

description:
3mix-random-plate4_41
3mix_RNA_expression.txt


title: LIV50NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 5

value: non-cachectic melanoma cells


title: LIV49NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 4


title: 3mix-random, 3mix-random-plate4_38

description:
3mix-random-plate4_38
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_39

description:
3mix-random-plate4_39
3mix_RNA_expression.txt


title: LIV48NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 3


title: 3mix-random, 3mix-random-plate4_40

description:
3mix-random-plate4_40
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_36

description:
3mix-random-plate4_36
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_37

description:
3mix-random-plate4_37
3mix_RNA_expression.txt


title: LIV30CAC8wk

description: cachectic melanoma cells 8 weeks replicate 7


title: LIV46NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 1


title: LIV28CAC8wk

description: cachectic melanoma cells 8 weeks replicate 6


title: 3mix-random, 3mix-random-plate4_35

description:
3mix-random-plate4_35
3mix_RNA_expression.txt


title: LIV21CAC8wk

description: cachectic melanoma cells 8 weeks replicate 2


title: 3mix-random, 3mix-random-plate4_30

description:
3mix-random-plate4_30
3mix_RNA_expression.txt


title: LIV19CAC8wk

description: cachectic melanoma cells 8 weeks replicate 1


title: 3mix-random, 3mix-random-plate4_29

description:
3mix-random-plate4_29
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_28

description:
3mix-random-plate4_28
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_32

description:
3mix-random-plate4_32
3mix_RNA_expression.txt


title: LIV24CAC8wk

description: cachectic melanoma cells 8 weeks replicate 4


title: LIV27CAC8wk

description: cachectic melanoma cells 8 weeks replicate 5


title: 3mix-random, 3mix-random-plate4_27

description:
3mix-random-plate4_27
3mix_RNA_expression.txt


title: LIV23CAC8wk

description: cachectic melanoma cells 8 weeks replicate 3


title: LIV66Con8wk

description: mock injected 8 weeks replicate 1


title: LIV65Con6wk

description: mock injected 6 weeks replicate 5


title: LIV68Con8wk

description: mock injected 8 weeks replicate 3


title: 3mix-random, 3mix-random-plate4_26

description:
3mix-random-plate4_26
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_31

description:
3mix-random-plate4_31
3mix_RNA_expression.txt


title: LIV63Con6wk

description: mock injected 6 weeks replicate 3


title: LIV47NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 2


title: LIV64Con6wk

description: mock injected 6 weeks replicate 4


title: 3mix-random, 3mix-random-plate4_25

description:
3mix-random-plate4_25
3mix_RNA_expression.txt


title: LIV62Con6wk

description: mock injected 6 weeks replicate 2


title: 3mix-random, 3mix-random-plate4_34

description:
3mix-random-plate4_34
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_33

description:
3mix-random-plate4_33
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_24

description:
3mix-random-plate4_24
3mix_RNA_expression.txt


title: LIV61Con6wk

description: mock injected 6 weeks replicate 1


title: LIV45NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 5


title: LIV43NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 3


title: 3mix-random, 3mix-random-plate4_22

description:
3mix-random-plate4_22
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_21

description:
3mix-random-plate4_21
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_20

description:
3mix-random-plate4_20
3mix_RNA_expression.txt


title: LIV42NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 2


title: 3mix-random, 3mix-random-plate4_19

description:
3mix-random-plate4_19
3mix_RNA_expression.txt


title: LIV41NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 1


title: LIV15CAC6wk

description: cachectic melanoma cells 6 weeks replicate 5


title: 3mix-random, 3mix-random-plate4_18

description:
3mix-random-plate4_18
3mix_RNA_expression.txt


title: LIV13CAC6wk

description: cachectic melanoma cells 6 weeks replicate 3


title: 3mix-random, 3mix-random-plate4_17

description:
3mix-random-plate4_17
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_16

description:
3mix-random-plate4_16
3mix_RNA_expression.txt


title: LIV14CAC6wk

description: cachectic melanoma cells 6 weeks replicate 4


title: LIV12CAC6wk

description: cachectic melanoma cells 6 weeks replicate 2


title: 3mix-random, 3mix-random-plate4_15

description:
3mix-random-plate4_15
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_23

description:
3mix-random-plate4_23
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_14

description:
3mix-random-plate4_14
3mix_RNA_expression.txt


title: LIV44NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 4


title: 3mix-random, 3mix-random-plate4_12

description:
3mix-random-plate4_12
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_11

description:
3mix-random-plate4_11
3mix_RNA_expression.txt


title: LIV58Con4wk

description: mock injected 4 weeks replicate 3


title: LIV59Con4wk

description: mock injected 4 weeks replicate 4


title: LIV11CAC6wk

description: cachectic melanoma cells 6 weeks replicate 1


title: 3mix-random, 3mix-random-plate4_13

description:
3mix-random-plate4_13
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_9

description:
3mix-random-plate4_9
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_10

description:
3mix-random-plate4_10
3mix_RNA_expression.txt


title: LIV57Con4wk

description: mock injected 4 weeks replicate 2


title: 3mix-random, 3mix-random-plate4_8

description:
3mix-random-plate4_8
3mix_RNA_expression.txt


title: LIV40NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 5


title: LIV56Con4wk

description: mock injected 4 weeks replicate 1


title: 3mix-random, 3mix-random-plate4_7

description:
3mix-random-plate4_7
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_6

description:
3mix-random-plate4_6
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_5

description:
3mix-random-plate4_5
3mix_RNA_expression.txt


title: LIV37NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 2


title: 3mix-random, 3mix-random-plate4_3

description:
3mix-random-plate4_3
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate4_4

description:
3mix-random-plate4_4
3mix_RNA_expression.txt


title: LIV60Con4wk

description: mock injected 4 weeks replicate 5


title: 3mix-random, 3mix-random-plate4_2

description:
3mix-random-plate4_2
3mix_RNA_expression.txt


title: LIV36NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 1


title: 3mix-random, 3mix-random-plate4_1

description:
3mix-random-plate4_1
3mix_RNA_expression.txt


title: LIV9CAC4wk

description: cachectic melanoma cells 4 weeks replicate 4


title: 3mix-random, 3mix-random-plate3_95

description:
3mix-random-plate3_95
3mix_RNA_expression.txt


title: LIV6CAC4wk

description: cachectic melanoma cells 4 weeks replicate 1


title: 3mix-random, 3mix-random-plate3_96

description:
3mix-random-plate3_96
3mix_RNA_expression.txt


title: LIV7CAC4wk

description: cachectic melanoma cells 4 weeks replicate 2


title: 3mix-random, 3mix-random-plate3_93

description:
3mix-random-plate3_93
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_94

description:
3mix-random-plate3_94
3mix_RNA_expression.txt


title: LIV8CAC4wk

description: cachectic melanoma cells 4 weeks replicate 3


title: LIV54Con2wk

description: mock injected 2 weeks replicate 4


title: 3mix-random, 3mix-random-plate3_91

description:
3mix-random-plate3_91
3mix_RNA_expression.txt


title: LIV52Con2wk

description: mock injected 2 weeks replicate 2


title: 3mix-random, 3mix-random-plate3_89

description:
3mix-random-plate3_89
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_92

description:
3mix-random-plate3_92
3mix_RNA_expression.txt


title: LIV55Con2wk

description: mock injected 2 weeks replicate 5


title: LIV39NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 4


title: LIV51Con2wk

description: mock injected 2 weeks replicate 1


title: 3mix-random, 3mix-random-plate3_90

description:
3mix-random-plate3_90
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_87

description:
3mix-random-plate3_87
3mix_RNA_expression.txt


title: LIV10CAC4wk

description: cachectic melanoma cells 4 weeks replicate 5


title: LIV38NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 3


title: LIV35NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 5


title: 3mix-random, 3mix-random-plate3_88

description:
3mix-random-plate3_88
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_86

description:
3mix-random-plate3_86
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_84

description:
3mix-random-plate3_84
3mix_RNA_expression.txt


title: LIV32NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 2


title: LIV31NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 1


title: LIV33NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 3


title: 3mix-random, 3mix-random-plate3_83

description:
3mix-random-plate3_83
3mix_RNA_expression.txt


title: LIV53Con2wk

description: mock injected 2 weeks replicate 3


title: 3mix-random, 3mix-random-plate3_85

description:
3mix-random-plate3_85
3mix_RNA_expression.txt


title: LIV4CAC2wk

description: cachectic melanoma cells 2 weeks replicate 4


title: LIV2CAC2wk

description: cachectic melanoma cells 2 weeks replicate 2


title: LIV5CAC2wk

description: cachectic melanoma cells 2 weeks replicate 5


title: LIV1CAC2wk

description: cachectic melanoma cells 2 weeks replicate 1


title: 3mix-random, 3mix-random-plate3_82

description:
3mix-random-plate3_82
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_81

description:
3mix-random-plate3_81
3mix_RNA_expression.txt


title: LIV3CAC2wk

description: cachectic melanoma cells 2 weeks replicate 3


title: HEART70Con8wk

description: mock injected 8 weeks replicate 5

source_name: heart from female C57BL/6J mice

value: heart


title: 3mix-random, 3mix-random-plate3_78

description:
3mix-random-plate3_78
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_80

description:
3mix-random-plate3_80
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_79

description:
3mix-random-plate3_79
3mix_RNA_expression.txt


title: HEART69Con8wk

description: mock injected 8 weeks replicate 4

value: 2 months


title: HEART68Con8wk

description: mock injected 8 weeks replicate 3


title: 3mix-random, 3mix-random-plate3_77

description:
3mix-random-plate3_77
3mix_RNA_expression.txt


title: LIV34NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 4


title: HEART67Con8wk

description: mock injected 8 weeks replicate 2


title: HEART66Con8wk

description: mock injected 8 weeks replicate 1


title: 3mix-random, 3mix-random-plate3_74

description:
3mix-random-plate3_74
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_73

description:
3mix-random-plate3_73
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_75

description:
3mix-random-plate3_75
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_71

description:
3mix-random-plate3_71
3mix_RNA_expression.txt


title: HEART48NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 3


title: HEART49NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 4


title: HEART46NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 1


title: 3mix-random, 3mix-random-plate3_72

description:
3mix-random-plate3_72
3mix_RNA_expression.txt


title: HEART47NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 2


title: 3mix-random, 3mix-random-plate3_70

description:
3mix-random-plate3_70
3mix_RNA_expression.txt


title: HEART30CAC8wk

description: cachectic melanoma cells 8 weeks replicate 7

value: cachectic melanoma cells


title: 3mix-random, 3mix-random-plate3_66

description:
3mix-random-plate3_66
3mix_RNA_expression.txt


title: HEART28CAC8wk

description: cachectic melanoma cells 8 weeks replicate 6

value: 8 weeks


title: 3mix-random, 3mix-random-plate3_68

description:
3mix-random-plate3_68
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_67

description:
3mix-random-plate3_67
3mix_RNA_expression.txt


title: HEART23CAC8wk

description: cachectic melanoma cells 8 weeks replicate 3


title: HEART27CAC8wk

description: cachectic melanoma cells 8 weeks replicate 5


title: HEART19CAC8wk

description: cachectic melanoma cells 8 weeks replicate 1


title: HEART21CAC8wk

description: cachectic melanoma cells 8 weeks replicate 2


title: HEART24CAC8wk

description: cachectic melanoma cells 8 weeks replicate 4


title: 3mix-random, 3mix-random-plate3_62

description:
3mix-random-plate3_62
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_61

description:
3mix-random-plate3_61
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_65

description:
3mix-random-plate3_65
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_76

description:
3mix-random-plate3_76
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_63

description:
3mix-random-plate3_63
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_64

description:
3mix-random-plate3_64
3mix_RNA_expression.txt


title: HEART65Con6wk

description: mock injected 6 weeks replicate 5


title: 3mix-random, 3mix-random-plate3_60

description:
3mix-random-plate3_60
3mix_RNA_expression.txt


title: HEART50NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 5


title: HEART64Con6wk

description: mock injected 6 weeks replicate 4


title: 3mix-random, 3mix-random-plate3_69

description:
3mix-random-plate3_69
3mix_RNA_expression.txt


title: HEART61Con6wk

description: mock injected 6 weeks replicate 1


title: HEART62Con6wk

description: mock injected 6 weeks replicate 2


title: 3mix-random, 3mix-random-plate3_53

description:
3mix-random-plate3_53
3mix_RNA_expression.txt


title: HEART42NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 2


title: 3mix-random, 3mix-random-plate3_57

description:
3mix-random-plate3_57
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_58

description:
3mix-random-plate3_58
3mix_RNA_expression.txt


title: HEART45NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 5


title: HEART41NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 1


title: 3mix-random, 3mix-random-plate3_55

description:
3mix-random-plate3_55
3mix_RNA_expression.txt


title: HEART43NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 3


title: 3mix-random, 3mix-random-plate3_54

description:
3mix-random-plate3_54
3mix_RNA_expression.txt


title: HEART44NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 4


title: 3mix-random, 3mix-random-plate3_51

description:
3mix-random-plate3_51
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_52

description:
3mix-random-plate3_52
3mix_RNA_expression.txt


title: HEART15CAC6wk

description: cachectic melanoma cells 6 weeks replicate 5


title: 3mix-random, 3mix-random-plate3_49

description:
3mix-random-plate3_49
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_47

description:
3mix-random-plate3_47
3mix_RNA_expression.txt


title: HEART14CAC6wk

description: cachectic melanoma cells 6 weeks replicate 4


title: 3mix-random, 3mix-random-plate3_48

description:
3mix-random-plate3_48
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_59

description:
3mix-random-plate3_59
3mix_RNA_expression.txt


title: HEART11CAC6wk

description: cachectic melanoma cells 6 weeks replicate 1


title: HEART12CAC6wk

description: cachectic melanoma cells 6 weeks replicate 2


title: HEART60Con4wk

description: mock injected 4 weeks replicate 5


title: HEART63Con6wk

description: mock injected 6 weeks replicate 3


title: HEART13CAC6wk

description: cachectic melanoma cells 6 weeks replicate 3


title: 3mix-random, 3mix-random-plate3_46

description:
3mix-random-plate3_46
3mix_RNA_expression.txt


title: HEART57Con4wk

description: mock injected 4 weeks replicate 2


title: 3mix-random, 3mix-random-plate3_56

description:
3mix-random-plate3_56
3mix_RNA_expression.txt


title: HEART59Con4wk

description: mock injected 4 weeks replicate 4


title: HEART58Con4wk

description: mock injected 4 weeks replicate 3


title: 3mix-random, 3mix-random-plate3_45

description:
3mix-random-plate3_45
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_42

description:
3mix-random-plate3_42
3mix_RNA_expression.txt


title: HEART56Con4wk

description: mock injected 4 weeks replicate 1


title: 3mix-random, 3mix-random-plate3_50

description:
3mix-random-plate3_50
3mix_RNA_expression.txt


title: HEART38NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 3


title: 3mix-random, 3mix-random-plate3_41

description:
3mix-random-plate3_41
3mix_RNA_expression.txt


title: HEART37NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 2


title: HEART39NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 4


title: 3mix-random, 3mix-random-plate3_38

description:
3mix-random-plate3_38
3mix_RNA_expression.txt


title: HEART36NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 1


title: 3mix-random, 3mix-random-plate3_37

description:
3mix-random-plate3_37
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_34

description:
3mix-random-plate3_34
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_35

description:
3mix-random-plate3_35
3mix_RNA_expression.txt


title: HEART9CAC4wk

description: cachectic melanoma cells 4 weeks replicate 4


title: 3mix-random, 3mix-random-plate3_36

description:
3mix-random-plate3_36
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_39

description:
3mix-random-plate3_39
3mix_RNA_expression.txt


title: HEART10CAC4wk

description: cachectic melanoma cells 4 weeks replicate 5


title: 3mix-random, 3mix-random-plate3_44

description:
3mix-random-plate3_44
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_43

description:
3mix-random-plate3_43
3mix_RNA_expression.txt


title: HEART55Con2wk

description: mock injected 2 weeks replicate 5


title: 3mix-random, 3mix-random-plate3_33

description:
3mix-random-plate3_33
3mix_RNA_expression.txt


title: HEART7CAC4wk

description: cachectic melanoma cells 4 weeks replicate 2


title: HEART8CAC4wk

description: cachectic melanoma cells 4 weeks replicate 3


title: 3mix-random, 3mix-random-plate3_32

description:
3mix-random-plate3_32
3mix_RNA_expression.txt


title: HEART53Con2wk

description: mock injected 2 weeks replicate 3


title: HEART40NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 5


title: HEART35NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 5


title: HEART54Con2wk

description: mock injected 2 weeks replicate 4


title: 3mix-random, 3mix-random-plate3_40

description:
3mix-random-plate3_40
3mix_RNA_expression.txt


title: HEART52Con2wk

description: mock injected 2 weeks replicate 2


title: 3mix-random, 3mix-random-plate3_29

description:
3mix-random-plate3_29
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_27

description:
3mix-random-plate3_27
3mix_RNA_expression.txt


title: HEART34NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 4


title: 3mix-random, 3mix-random-plate3_28

description:
3mix-random-plate3_28
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_31

description:
3mix-random-plate3_31
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_26

description:
3mix-random-plate3_26
3mix_RNA_expression.txt


title: HEART51Con2wk

description: mock injected 2 weeks replicate 1


title: 3mix-random, 3mix-random-plate3_25

description:
3mix-random-plate3_25
3mix_RNA_expression.txt


title: HEART33NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 3


title: HEART6CAC4wk

description: cachectic melanoma cells 4 weeks replicate 1


title: HEART31NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 1


title: HEART5CAC2wk

description: cachectic melanoma cells 2 weeks replicate 5


title: 3mix-random, 3mix-random-plate3_23

description:
3mix-random-plate3_23
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_24

description:
3mix-random-plate3_24
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_22

description:
3mix-random-plate3_22
3mix_RNA_expression.txt


title: HEART3CAC2wk

description: cachectic melanoma cells 2 weeks replicate 3


title: 3mix-random, 3mix-random-plate3_20

description:
3mix-random-plate3_20
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_21

description:
3mix-random-plate3_21
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_19

description:
3mix-random-plate3_19
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_18

description:
3mix-random-plate3_18
3mix_RNA_expression.txt


title: HEART4CAC2wk

description: cachectic melanoma cells 2 weeks replicate 4


title: HEART32NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 2


title: HEART2CAC2wk

description: cachectic melanoma cells 2 weeks replicate 2


title: 3mix-random, 3mix-random-plate3_30

description:
3mix-random-plate3_30
3mix_RNA_expression.txt


title: HEART1CAC2wk

description: cachectic melanoma cells 2 weeks replicate 1


title: 3mix-random, 3mix-random-plate3_17

description:
3mix-random-plate3_17
3mix_RNA_expression.txt


title: TA69Con8wk

description: mock injected 8 weeks replicate 4

data_processing:
Illumina Casava1.8 software used for basecalling.
Sequenced reads were trimmed for adaptor sequence and low-quality sequence, then mapped to mm10 whole genome using CLC Genomic Workbench RNA seq tool. TPM for transcripts were reported.
Genome_build: mm10
Supplementary_files_format_and_content: tab-delimited text file includes TPM values for all 62 samples

source_name: tibialis anterior skeletal muscle from female C57BL/6J mice

value: female

value: tibialis anterior skeletal muscle

tag: time


title: TA68Con8wk

description: mock injected 8 weeks replicate 3


title: 3mix-random, 3mix-random-plate3_16

description:
3mix-random-plate3_16
3mix_RNA_expression.txt

value: ALPS


title: 3mix-random, 3mix-random-plate3_15

description:
3mix-random-plate3_15
3mix_RNA_expression.txt


title: TA70Con8wk

description: mock injected 8 weeks replicate 5


title: TA66Con8wk

description: mock injected 8 weeks replicate 1


title: TA67Con8wk

description: mock injected 8 weeks replicate 2


title: 3mix-random, 3mix-random-plate3_12

description:
3mix-random-plate3_12
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_13

description:
3mix-random-plate3_13
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_10

description:
3mix-random-plate3_10
3mix_RNA_expression.txt


title: TA49NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 4


title: TA48NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 3


title: TA47NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 2


title: 3mix-random, 3mix-random-plate3_11

description:
3mix-random-plate3_11
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_8

description:
3mix-random-plate3_8
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_7

description:
3mix-random-plate3_7
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_9

description:
3mix-random-plate3_9
3mix_RNA_expression.txt


title: TA27CAC8wk

description: cachectic melanoma cells 8 weeks replicate 5


title: TA28CAC8wk

description: cachectic melanoma cells 8 weeks replicate 6


title: TA46NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 1


title: 3mix-random, 3mix-random-plate3_4

description:
3mix-random-plate3_4
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_6

description:
3mix-random-plate3_6
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_3

description:
3mix-random-plate3_3
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate3_5

description:
3mix-random-plate3_5
3mix_RNA_expression.txt


title: TA24CAC8wk

description: cachectic melanoma cells 8 weeks replicate 4


title: TA23CAC8wk

description: cachectic melanoma cells 8 weeks replicate 3


title: 3mix-random, 3mix-random-plate3_14

description:
3mix-random-plate3_14
3mix_RNA_expression.txt


title: TA50NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 5


title: TA21CAC8wk

description: cachectic melanoma cells 8 weeks replicate 2


title: TA65Con6wk

description: mock injected 6 weeks replicate 5


title: 3mix-random, 3mix-random-plate3_2

description:
3mix-random-plate3_2
3mix_RNA_expression.txt


title: TA19CAC8wk

description: cachectic melanoma cells 8 weeks replicate 1


title: 3mix-random, 3mix-random-plate3_1

description:
3mix-random-plate3_1
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_96

description:
3mix-random-plate2_96
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_95

description:
3mix-random-plate2_95
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_94

description:
3mix-random-plate2_94
3mix_RNA_expression.txt


title: TA64Con6wk

description: mock injected 6 weeks replicate 4


title: TA63Con6wk

description: mock injected 6 weeks replicate 3


title: TA30CAC8wk

description: cachectic melanoma cells 8 weeks replicate 7


title: TA61Con6wk

description: mock injected 6 weeks replicate 1


title: 3mix-random, 3mix-random-plate2_93

description:
3mix-random-plate2_93
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_92

description:
3mix-random-plate2_92
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_91

description:
3mix-random-plate2_91
3mix_RNA_expression.txt


title: TA62Con6wk

description: mock injected 6 weeks replicate 2


title: TA45NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 5


title: 3mix-random, 3mix-random-plate2_90

description:
3mix-random-plate2_90
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_88

description:
3mix-random-plate2_88
3mix_RNA_expression.txt


title: TA43NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 3


title: 3mix-random, 3mix-random-plate2_89

description:
3mix-random-plate2_89
3mix_RNA_expression.txt


title: TA44NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 4


title: TA15CAC6wk

description: cachectic melanoma cells 6 weeks replicate 5


title: TA42NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 2


title: TA41NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 1


title: TA14CAC6wk

description: cachectic melanoma cells 6 weeks replicate 4


title: 3mix-random, 3mix-random-plate2_87

description:
3mix-random-plate2_87
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_85

description:
3mix-random-plate2_85
3mix_RNA_expression.txt


title: TA13CAC6wk

description: cachectic melanoma cells 6 weeks replicate 3


title: 3mix-random, 3mix-random-plate2_83

description:
3mix-random-plate2_83
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_81

description:
3mix-random-plate2_81
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_84

description:
3mix-random-plate2_84
3mix_RNA_expression.txt


title: TA12CAC6wk

description: cachectic melanoma cells 6 weeks replicate 2


title: 3mix-random, 3mix-random-plate2_80

description:
3mix-random-plate2_80
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_86

description:
3mix-random-plate2_86
3mix_RNA_expression.txt


title: TA60Con4wk

description: mock injected 4 weeks replicate 5


title: 3mix-random, 3mix-random-plate2_82

description:
3mix-random-plate2_82
3mix_RNA_expression.txt


title: TA59Con4wk

description: mock injected 4 weeks replicate 4


title: TA58Con4wk

description: mock injected 4 weeks replicate 3


title: TA57Con4wk

description: mock injected 4 weeks replicate 2


title: 3mix-random, 3mix-random-plate2_79

description:
3mix-random-plate2_79
3mix_RNA_expression.txt


title: TA56Con4wk

description: mock injected 4 weeks replicate 1


title: 3mix-random, 3mix-random-plate2_77

description:
3mix-random-plate2_77
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_76

description:
3mix-random-plate2_76
3mix_RNA_expression.txt


title: TA11CAC6wk

description: cachectic melanoma cells 6 weeks replicate 1


title: TA40NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 5


title: 3mix-random, 3mix-random-plate2_75

description:
3mix-random-plate2_75
3mix_RNA_expression.txt


title: TA39NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 4


title: 3mix-random, 3mix-random-plate2_73

description:
3mix-random-plate2_73
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_72

description:
3mix-random-plate2_72
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_74

description:
3mix-random-plate2_74
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_70

description:
3mix-random-plate2_70
3mix_RNA_expression.txt


title: TA37NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 2


title: TA38NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 3


title: TA36NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 1


title: TA10CAC4wk

description: cachectic melanoma cells 4 weeks replicate 5


title: 3mix-random, 3mix-random-plate2_71

description:
3mix-random-plate2_71
3mix_RNA_expression.txt


title: TA8CAC4wk

description: cachectic melanoma cells 4 weeks replicate 3


title: TA9CAC4wk

description: cachectic melanoma cells 4 weeks replicate 4


title: 3mix-random, 3mix-random-plate2_68

description:
3mix-random-plate2_68
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_78

description:
3mix-random-plate2_78
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_66

description:
3mix-random-plate2_66
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_65

description:
3mix-random-plate2_65
3mix_RNA_expression.txt


title: TA54Con2wk

description: mock injected 2 weeks replicate 4


title: TA7CAC4wk

description: cachectic melanoma cells 4 weeks replicate 2


title: 3mix-random, 3mix-random-plate2_64

description:
3mix-random-plate2_64
3mix_RNA_expression.txt


title: TA55Con2wk

description: mock injected 2 weeks replicate 5


title: TA6CAC4wk

description: cachectic melanoma cells 4 weeks replicate 1


title: 3mix-random, 3mix-random-plate2_61

description:
3mix-random-plate2_61
3mix_RNA_expression.txt


title: TA51Con2wk

description: mock injected 2 weeks replicate 1


title: TA53Con2wk

description: mock injected 2 weeks replicate 3


title: 3mix-random, 3mix-random-plate2_63

description:
3mix-random-plate2_63
3mix_RNA_expression.txt


title: TA35NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 5


title: 3mix-random, 3mix-random-plate2_59

description:
3mix-random-plate2_59
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_60

description:
3mix-random-plate2_60
3mix_RNA_expression.txt


title: TA34NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 4


title: TA33NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 3


title: 3mix-random, 3mix-random-plate2_58

description:
3mix-random-plate2_58
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_69

description:
3mix-random-plate2_69
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_57

description:
3mix-random-plate2_57
3mix_RNA_expression.txt


title: TA31NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 1


title: TA4CAC2wk

description: cachectic melanoma cells 2 weeks replicate 4


title: 3mix-random, 3mix-random-plate2_55

description:
3mix-random-plate2_55
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_56

description:
3mix-random-plate2_56
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_67

description:
3mix-random-plate2_67
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_53

description:
3mix-random-plate2_53
3mix_RNA_expression.txt


title: TA5CAC2wk

description: cachectic melanoma cells 2 weeks replicate 5


title: 3mix-random, 3mix-random-plate2_54

description:
3mix-random-plate2_54
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_51

description:
3mix-random-plate2_51
3mix_RNA_expression.txt


title: HIPCON16

description: Control for LLC cancer replicate 3

data_processing:
Illumina Casava1.8 software used for basecalling.
Sequenced reads were trimmed for adaptor sequence and low-quality sequence, then mapped to mm10 whole genome using CLC Genomic Workbench RNA seq tool. TPM for transcripts were reported.
Genome_build: mm10
Supplementary_files_format_and_content: tab-delimited text files include TPM values for all 24 samples

source_name: hippocampus from male C57BL/6J mice

value: hippocampus

value: 4 months

value: Control


title: 3mix-random, 3mix-random-plate2_52

description:
3mix-random-plate2_52
3mix_RNA_expression.txt


title: TA1CAC2wk

description: cachectic melanoma cells 2 weeks replicate 1


title: TA52Con2wk

description: mock injected 2 weeks replicate 2


title: 3mix-random, 3mix-random-plate2_62

description:
3mix-random-plate2_62
3mix_RNA_expression.txt


title: HIPCON17

description: Control for LLC cancer replicate 4


title: TA3CAC2wk

description: cachectic melanoma cells 2 weeks replicate 3


title: HIPCON15

description: Control for LLC cancer replicate 2


title: TA32NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 2


title: 3mix-random, 3mix-random-plate2_50

description:
3mix-random-plate2_50
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_49

description:
3mix-random-plate2_49
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_48

description:
3mix-random-plate2_48
3mix_RNA_expression.txt


title: HIPCON14

description: Control for LLC cancer replicate 1


title: 3mix-random, 3mix-random-plate2_45

description:
3mix-random-plate2_45
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_47

description:
3mix-random-plate2_47
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_46

description:
3mix-random-plate2_46
3mix_RNA_expression.txt


title: TA2CAC2wk

description: cachectic melanoma cells 2 weeks replicate 2


title: HIPLLC2

description: LLC cancer replicate 2

value: LLC cancer


title: HIPLLC3

description: LLC cancer replicate 3


title: HIPLLC1

description: LLC cancer replicate 1


title: CERCON17

description: Control for LLC cancer replicate 4

source_name: cerebellum from male C57BL/6J mice

value: cerebellum


title: 3mix-random, 3mix-random-plate2_42

description:
3mix-random-plate2_42
3mix_RNA_expression.txt


title: CERCON16

description: Control for LLC cancer replicate 3


title: 3mix-random, 3mix-random-plate2_40

description:
3mix-random-plate2_40
3mix_RNA_expression.txt


title: CERCON14

description: Control for LLC cancer replicate 1


title: 3mix-random, 3mix-random-plate2_44

description:
3mix-random-plate2_44
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_43

description:
3mix-random-plate2_43
3mix_RNA_expression.txt


title: CERCON15

description: Control for LLC cancer replicate 2


title: HIPLLC4

description: LLC cancer replicate 4


title: 3mix-random, 3mix-random-plate2_39

description:
3mix-random-plate2_39
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_38

description:
3mix-random-plate2_38
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_41

description:
3mix-random-plate2_41
3mix_RNA_expression.txt


title: CERLLC4

description: LLC cancer replicate 4


title: CERLLC2

description: LLC cancer replicate 2


title: CERLLC1

description: LLC cancer replicate 1


title: 3mix-random, 3mix-random-plate2_37

description:
3mix-random-plate2_37
3mix_RNA_expression.txt


title: CERLLC3

description: LLC cancer replicate 3


title: 3mix-random, 3mix-random-plate2_36

description:
3mix-random-plate2_36
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_33

description:
3mix-random-plate2_33
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_35

description:
3mix-random-plate2_35
3mix_RNA_expression.txt


title: NEOCON14

description: Control for LLC cancer replicate 1

source_name: neocortex from male C57BL/6J mice

value: neocortex


title: NEOCON17

description: Control for LLC cancer replicate 4


title: 3mix-random, 3mix-random-plate2_28

description:
3mix-random-plate2_28
3mix_RNA_expression.txt

value: random selection


title: NEOLLC2

description: LLC cancer replicate 2


title: 3mix-random, 3mix-random-plate2_32

description:
3mix-random-plate2_32
3mix_RNA_expression.txt


title: NEOCON15

description: Control for LLC cancer replicate 2


title: 3mix-random, 3mix-random-plate2_31

description:
3mix-random-plate2_31
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_34

description:
3mix-random-plate2_34
3mix_RNA_expression.txt


title: NEOLLC1

description: LLC cancer replicate 1


title: NEOLLC4

description: LLC cancer replicate 4


title: NEOLLC3

description: LLC cancer replicate 3


title: BAT70Con8wk

description: mock injected 8 weeks replicate 5

source_name: brown adipose tissue from female C57BL/6J mice

value: brown adipose tissue


title: NEOCON16

description: Control for LLC cancer replicate 3


title: BAT69Con8wk

description: mock injected 8 weeks replicate 4

value: mock injected


title: 3mix-random, 3mix-random-plate2_25

description:
3mix-random-plate2_25
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_26

description:
3mix-random-plate2_26
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_27

description:
3mix-random-plate2_27
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_24

description:
3mix-random-plate2_24
3mix_RNA_expression.txt


title: BAT67Con8wk

description: mock injected 8 weeks replicate 2


title: 3mix-random, 3mix-random-plate2_23

description:
3mix-random-plate2_23
3mix_RNA_expression.txt


title: BAT68Con8wk

description: mock injected 8 weeks replicate 3


title: 3mix-random, 3mix-random-plate2_21

description:
3mix-random-plate2_21
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_30

description:
3mix-random-plate2_30
3mix_RNA_expression.txt


title: BAT49NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 4

value: non-cachectic melanoma cells


title: 3mix-random, 3mix-random-plate2_29

description:
3mix-random-plate2_29
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_20

description:
3mix-random-plate2_20
3mix_RNA_expression.txt


title: BAT50NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 5


title: 3mix-random, 3mix-random-plate2_22

description:
3mix-random-plate2_22
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_18

description:
3mix-random-plate2_18
3mix_RNA_expression.txt


title: BAT48NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 3


title: BAT30CAC8wk

description: cachectic melanoma cells 8 weeks replicate 7


title: BAT46NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 1


title: BAT28CAC8wk

description: cachectic melanoma cells 8 weeks replicate 6


title: BAT47NCAC8wk

description: non-cachectic melanoma cells 8 weeks replicate 2


title: 3mix-random, 3mix-random-plate2_15

description:
3mix-random-plate2_15
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_16

description:
3mix-random-plate2_16
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_17

description:
3mix-random-plate2_17
3mix_RNA_expression.txt


title: BAT24CAC8wk

description: cachectic melanoma cells 8 weeks replicate 4


title: BAT27CAC8wk

description: cachectic melanoma cells 8 weeks replicate 5


title: 3mix-random, 3mix-random-plate2_12

description:
3mix-random-plate2_12
3mix_RNA_expression.txt


title: BAT21CAC8wk

description: cachectic melanoma cells 8 weeks replicate 2


title: BAT23CAC8wk

description: cachectic melanoma cells 8 weeks replicate 3


title: 3mix-random, 3mix-random-plate2_13

description:
3mix-random-plate2_13
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_14

description:
3mix-random-plate2_14
3mix_RNA_expression.txt


title: BAT66Con8wk

description: mock injected 8 weeks replicate 1


title: 3mix-random, 3mix-random-plate2_10

description:
3mix-random-plate2_10
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_11

description:
3mix-random-plate2_11
3mix_RNA_expression.txt


title: BAT65Con6wk

description: mock injected 6 weeks replicate 5

value: 6 weeks


title: 3mix-random, 3mix-random-plate2_19

description:
3mix-random-plate2_19
3mix_RNA_expression.txt


title: BAT19CAC8wk

description: cachectic melanoma cells 8 weeks replicate 1

value: 2 months


title: BAT64Con6wk

description: mock injected 6 weeks replicate 4


title: 3mix-random, 3mix-random-plate2_8

description:
3mix-random-plate2_8
3mix_RNA_expression.txt


title: BAT63Con6wk

description: mock injected 6 weeks replicate 3


title: BAT61Con6wk

description: mock injected 6 weeks replicate 1


title: BAT62Con6wk

description: mock injected 6 weeks replicate 2


title: 3mix-random, 3mix-random-plate2_7

description:
3mix-random-plate2_7
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_6

description:
3mix-random-plate2_6
3mix_RNA_expression.txt


title: BAT45NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 5


title: 3mix-random, 3mix-random-plate2_5

description:
3mix-random-plate2_5
3mix_RNA_expression.txt


title: BAT44NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 4


title: 3mix-random, 3mix-random-plate2_3

description:
3mix-random-plate2_3
3mix_RNA_expression.txt


title: BAT43NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 3


title: 3mix-random, 3mix-random-plate2_2

description:
3mix-random-plate2_2
3mix_RNA_expression.txt


title: BAT42NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 2


title: 3mix-random, 3mix-random-plate2_9

description:
3mix-random-plate2_9
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate2_1

description:
3mix-random-plate2_1
3mix_RNA_expression.txt


title: BAT41NCAC6wk

description: non-cachectic melanoma cells 6 weeks replicate 1


title: BAT13CAC6wk

description: cachectic melanoma cells 6 weeks replicate 3

value: cachectic melanoma cells


title: 3mix-random, 3mix-random-plate1_94

description:
3mix-random-plate1_94
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_92

description:
3mix-random-plate1_92
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_93

description:
3mix-random-plate1_93
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_96

description:
3mix-random-plate1_96
3mix_RNA_expression.txt


title: BAT15CAC6wk

description: cachectic melanoma cells 6 weeks replicate 5


title: BAT11CAC6wk

description: cachectic melanoma cells 6 weeks replicate 1


title: BAT14CAC6wk

description: cachectic melanoma cells 6 weeks replicate 4


title: 3mix-random, 3mix-random-plate1_95

description:
3mix-random-plate1_95
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_90

description:
3mix-random-plate1_90
3mix_RNA_expression.txt


title: BAT60Con4wk

description: mock injected 4 weeks replicate 5

value: 4 weeks


title: 3mix-random, 3mix-random-plate2_4

description:
3mix-random-plate2_4
3mix_RNA_expression.txt


title: BAT12CAC6wk

description: cachectic melanoma cells 6 weeks replicate 2


title: 3mix-random, 3mix-random-plate1_91

description:
3mix-random-plate1_91
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_89

description:
3mix-random-plate1_89
3mix_RNA_expression.txt


title: BAT58Con4wk

description: mock injected 4 weeks replicate 3


title: BAT59Con4wk

description: mock injected 4 weeks replicate 4


title: BAT56Con4wk

description: mock injected 4 weeks replicate 1


title: BAT57Con4wk

description: mock injected 4 weeks replicate 2


title: BAT40NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 5


title: 3mix-random, 3mix-random-plate1_85

description:
3mix-random-plate1_85
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_84

description:
3mix-random-plate1_84
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_86

description:
3mix-random-plate1_86
3mix_RNA_expression.txt


title: BAT38NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 3


title: BAT10CAC4wk

description: cachectic melanoma cells 4 weeks replicate 5


title: BAT36NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 1


title: 3mix-random, 3mix-random-plate1_81

description:
3mix-random-plate1_81
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_82

description:
3mix-random-plate1_82
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_80

description:
3mix-random-plate1_80
3mix_RNA_expression.txt


title: BAT9CAC4wk

description: cachectic melanoma cells 4 weeks replicate 4


title: 3mix-random, 3mix-random-plate1_83

description:
3mix-random-plate1_83
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_79

description:
3mix-random-plate1_79
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_78

description:
3mix-random-plate1_78
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_77

description:
3mix-random-plate1_77
3mix_RNA_expression.txt


title: BAT7CAC4wk

description: cachectic melanoma cells 4 weeks replicate 2


title: BAT8CAC4wk

description: cachectic melanoma cells 4 weeks replicate 3


title: 3mix-random, 3mix-random-plate1_88

description:
3mix-random-plate1_88
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_76

description:
3mix-random-plate1_76
3mix_RNA_expression.txt


title: BAT56CAC4wk

description: cachectic melanoma cells 4 weeks replicate 1


title: 3mix-random, 3mix-random-plate1_75

description:
3mix-random-plate1_75
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_87

description:
3mix-random-plate1_87
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_73

description:
3mix-random-plate1_73
3mix_RNA_expression.txt


title: BAT52Con2wk

description: mock injected 2 weeks replicate 2

value: 2 weeks


title: BAT54Con2wk

description: mock injected 2 weeks replicate 4


title: BAT53Con2wk

description: mock injected 2 weeks replicate 3


title: BAT39NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 4


title: BAT33NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 3


title: BAT5CAC2wk

description: cachectic melanoma cells 2 weeks replicate 5


title: BAT37NCAC4wk

description: non-cachectic melanoma cells 4 weeks replicate 2


title: 3mix-random, 3mix-random-plate1_67

description:
3mix-random-plate1_67
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_71

description:
3mix-random-plate1_71
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_64

description:
3mix-random-plate1_64
3mix_RNA_expression.txt


title: BAT3CAC2wk

description: cachectic melanoma cells 2 weeks replicate 3


title: BAT35NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 5


title: 3mix-random, 3mix-random-plate1_72

description:
3mix-random-plate1_72
3mix_RNA_expression.txt


title: BAT1CAC2wk

description: cachectic melanoma cells 2 weeks replicate 1


title: 3mix-random, 3mix-random-plate1_70

description:
3mix-random-plate1_70
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_62

description:
3mix-random-plate1_62
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_69

description:
3mix-random-plate1_69
3mix_RNA_expression.txt


title: BAT32NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 2


title: BAT31NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 1


title: BAT51Con2wk

description: mock injected 2 weeks replicate 1


title: BAT55Con2wk

description: mock injected 2 weeks replicate 5


title: 3mix-random, 3mix-random-plate1_66

description:
3mix-random-plate1_66
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_95

description:
3mix-timelapse-plate16_95
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_65

description:
3mix-random-plate1_65
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_94

description:
3mix-timelapse-plate16_94
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_74

description:
3mix-random-plate1_74
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_63

description:
3mix-random-plate1_63
3mix_RNA_expression.txt


title: BAT2CAC2wk

description: cachectic melanoma cells 2 weeks replicate 2


title: 3mix-timelapse, 3mix-timelapse-plate16_92

description:
3mix-timelapse-plate16_92
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_96

description:
3mix-timelapse-plate16_96
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_60

description:
3mix-random-plate1_60
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_68

description:
3mix-random-plate1_68
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_54

description:
3mix-random-plate1_54
3mix_RNA_expression.txt


title: BAT34NCAC2wk

description: non-cachectic melanoma cells 2 weeks replicate 4


title: 3mix-timelapse, 3mix-timelapse-plate16_90

description:
3mix-timelapse-plate16_90
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_61

description:
3mix-random-plate1_61
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_53

description:
3mix-random-plate1_53
3mix_RNA_expression.txt


title: BAT4CAC2wk

description: cachectic melanoma cells 2 weeks replicate 4


title: 3mix-random, 3mix-random-plate1_59

description:
3mix-random-plate1_59
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_52

description:
3mix-random-plate1_52
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_87

description:
3mix-timelapse-plate16_87
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_93

description:
3mix-timelapse-plate16_93
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_58

description:
3mix-random-plate1_58
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_57

description:
3mix-random-plate1_57
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_86

description:
3mix-timelapse-plate16_86
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_84

description:
3mix-timelapse-plate16_84
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_56

description:
3mix-random-plate1_56
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_49

description:
3mix-random-plate1_49
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_55

description:
3mix-random-plate1_55
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_91

description:
3mix-timelapse-plate16_91
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_89

description:
3mix-timelapse-plate16_89
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_48

description:
3mix-random-plate1_48
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_51

description:
3mix-random-plate1_51
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_50

description:
3mix-random-plate1_50
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_46

description:
3mix-random-plate1_46
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_81

description:
3mix-timelapse-plate16_81
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_45

description:
3mix-random-plate1_45
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_44

description:
3mix-random-plate1_44
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_85

description:
3mix-timelapse-plate16_85
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_78

description:
3mix-timelapse-plate16_78
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_47

description:
3mix-random-plate1_47
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_80

description:
3mix-timelapse-plate16_80
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_79

description:
3mix-timelapse-plate16_79
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_83

description:
3mix-timelapse-plate16_83
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_88

description:
3mix-timelapse-plate16_88
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_41

description:
3mix-random-plate1_41
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_76

description:
3mix-timelapse-plate16_76
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_43

description:
3mix-random-plate1_43
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_74

description:
3mix-timelapse-plate16_74
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_77

description:
3mix-timelapse-plate16_77
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_38

description:
3mix-random-plate1_38
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_40

description:
3mix-random-plate1_40
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_34

description:
3mix-random-plate1_34
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_70

description:
3mix-timelapse-plate16_70
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_42

description:
3mix-random-plate1_42
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_39

description:
3mix-random-plate1_39
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_37

description:
3mix-random-plate1_37
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_72

description:
3mix-timelapse-plate16_72
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_69

description:
3mix-timelapse-plate16_69
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_36

description:
3mix-random-plate1_36
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_82

description:
3mix-timelapse-plate16_82
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_71

description:
3mix-timelapse-plate16_71
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_67

description:
3mix-timelapse-plate16_67
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_68

description:
3mix-timelapse-plate16_68
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_66

description:
3mix-timelapse-plate16_66
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_35

description:
3mix-random-plate1_35
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_33

description:
3mix-random-plate1_33
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_32

description:
3mix-random-plate1_32
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_31

description:
3mix-random-plate1_31
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_75

description:
3mix-timelapse-plate16_75
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_65

description:
3mix-timelapse-plate16_65
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_73

description:
3mix-timelapse-plate16_73
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_64

description:
3mix-timelapse-plate16_64
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_29

description:
3mix-random-plate1_29
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_61

description:
3mix-timelapse-plate16_61
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_62

description:
3mix-timelapse-plate16_62
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_27

description:
3mix-random-plate1_27
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_28

description:
3mix-random-plate1_28
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_63

description:
3mix-timelapse-plate16_63
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_30

description:
3mix-random-plate1_30
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_60

description:
3mix-timelapse-plate16_60
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_25

description:
3mix-random-plate1_25
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_26

description:
3mix-random-plate1_26
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_24

description:
3mix-random-plate1_24
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_59

description:
3mix-timelapse-plate16_59
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_58

description:
3mix-timelapse-plate16_58
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_23

description:
3mix-random-plate1_23
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_22

description:
3mix-random-plate1_22
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_57

description:
3mix-timelapse-plate16_57
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_21

description:
3mix-random-plate1_21
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_20

description:
3mix-random-plate1_20
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_19

description:
3mix-random-plate1_19
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_54

description:
3mix-timelapse-plate16_54
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_17

description:
3mix-random-plate1_17
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_18

description:
3mix-random-plate1_18
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_53

description:
3mix-timelapse-plate16_53
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_55

description:
3mix-timelapse-plate16_55
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_56

description:
3mix-timelapse-plate16_56
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_51

description:
3mix-timelapse-plate16_51
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_15

description:
3mix-random-plate1_15
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_14

description:
3mix-random-plate1_14
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_49

description:
3mix-timelapse-plate16_49
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_16

description:
3mix-random-plate1_16
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_52

description:
3mix-timelapse-plate16_52
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_47

description:
3mix-timelapse-plate16_47
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_48

description:
3mix-timelapse-plate16_48
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_50

description:
3mix-timelapse-plate16_50
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_13

description:
3mix-random-plate1_13
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_45

description:
3mix-timelapse-plate16_45
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_46

description:
3mix-timelapse-plate16_46
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_11

description:
3mix-random-plate1_11
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_10

description:
3mix-random-plate1_10
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_12

description:
3mix-random-plate1_12
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_9

description:
3mix-random-plate1_9
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_44

description:
3mix-timelapse-plate16_44
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_42

description:
3mix-timelapse-plate16_42
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_43

description:
3mix-timelapse-plate16_43
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_7

description:
3mix-random-plate1_7
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_6

description:
3mix-random-plate1_6
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_8

description:
3mix-random-plate1_8
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_41

description:
3mix-timelapse-plate16_41
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_4

description:
3mix-random-plate1_4
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_5

description:
3mix-random-plate1_5
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_39

description:
3mix-timelapse-plate16_39
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_38

description:
3mix-timelapse-plate16_38
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_2

description:
3mix-random-plate1_2
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_40

description:
3mix-timelapse-plate16_40
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_37

description:
3mix-timelapse-plate16_37
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_1

description:
3mix-random-plate1_1
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_35

description:
3mix-timelapse-plate16_35
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_36

description:
3mix-timelapse-plate16_36
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_33

description:
3mix-timelapse-plate16_33
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_34

description:
3mix-timelapse-plate16_34
3mix_RNA_expression.txt


title: CD4+ T cells, R667-Th1_3

city: Suzhou

first: Yanan

middle: S

last: Zhang

state: Jiangsu

address: 199 Renai Road

department: Institutes of Biology and Medical Sciences

country: China

institute: Soochow University

data_processing:
Bowtie2 was used to  map clean reads to reference gene. Bowtie2 parameters forPE reads:-q--phred64--sensitive--dpad0--gbar99999999--mp1,1--np1--score-minL,0,-0.1-I1-X1000--no-mixed--no-discordant -p  16-k 200  Bowtie2 parameters forSE reads:-q--phred64--sensitive--dpad0--gbar99999999--mp1,1--np1--score-minL,0,-0.1-p16-k 200
HISAT was used to map clean reads to reference genome.HISAT parameters forPE reads:-p8--phred64--sensitive--no-discordant--no-mixed-I1-X1000  HISTAparameters forSE reads:-p8--phred64--sensitive-I1-X 1000
FPKM method is used in calculated expression level.
Genome_build: mm10
Supplementary_files_format_and_content: FPKMs

source_name: CD4+ T cells

growth_protocol: Spleens and lymph nodes were collected from mice of different genotypes, and single-cell suspensions were prepared by mechanical disruption in PBS. Naïve CD4+ T cells were isolated by magnetic sorting with a Miltenyi Biotec CD4+ CD62L+ T Cell Isolation kit, according to the manufacturer’s directions (Miltenyi Biotec, 130-106-643). CD4+ T cells were cultured in IMDM (Hyclone) supplemented with 10% FBS (Genmini), 100 units/ml penicillin, 100 μg/ml streptomycin (Shenggong), 4 mM L-glutamine, and 50μM β-mercaptoethanol, and activated with 5μg/ml precoated anti-CD3 (eBioscience) and 2μg/ml anti-CD28 (eBioscience). Th1 cells were differentiated by the addition of recombinant IL-12 (1 ng/ml, R&D Systems) and anti-IL-4 (10μg/ml, BD Pharmingen). Th17 cells were differentiated by the addition of recombinant IL-6 (20 ng/ml, R&D Systems), recombinant TGF-β (1 ng/ml, R&D Systems), anti-IFNγ (10μg/ml, BD Pharmingen) and anti-IL-4 (10μg/ml, BD Pharmingen), followed by recombinant IL-23 (30 ng/ml, R&D Systems) on day3. Treg cells were differentiated by the addition of TGF-β (5 ng/ml,R&D Systems) and recombinant IL-2 (40 ng/ml, PeproTech). CD4+ T cell cultures were split at ratio of 1:2 on day3 after activation.

extract_protocol:
CD4+ T cells were collected, flash frozen on dry ice. RNA was harvested using Trizol reagent and cleanup with the RNeasy MiniElute kit. Illumina TruSeq RNA Sample Prep Kit was used with 1 ug of total RNA for the construction of sequencing libraries.
RNA libraries were prepared for sequencing using standard Illumina protocols

treatment_protocol: CD4+ T cells were primed in different condition.

value: spleen

value: CD4+ Th1 cells

tag: genotype


title: 3mix-timelapse, 3mix-timelapse-plate16_32

description:
3mix-timelapse-plate16_32
3mix_RNA_expression.txt

value: ALPS


title: CD4+ T cells, R667-Th1_1


title: CD4+ T cells, R667-Th1_2


title: CD4+ T cells, R667-Th0_3

value: CD4+ Th0 cells


title: 3mix-timelapse, 3mix-timelapse-plate16_31

description:
3mix-timelapse-plate16_31
3mix_RNA_expression.txt


title: CD4+ T cells, R667-Th0_2


title: 3mix-timelapse, 3mix-timelapse-plate16_30

description:
3mix-timelapse-plate16_30
3mix_RNA_expression.txt


title: CD4+ T cells, R667-Th0_1


title: CD4+ T cells, KO-Th1_3


title: 3mix-timelapse, 3mix-timelapse-plate16_27

description:
3mix-timelapse-plate16_27
3mix_RNA_expression.txt


title: CD4+ T cells, KO-Th1_2


title: 3mix-timelapse, 3mix-timelapse-plate16_29

description:
3mix-timelapse-plate16_29
3mix_RNA_expression.txt


title: 3mix-random, 3mix-random-plate1_3

description:
3mix-random-plate1_3
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_25

description:
3mix-timelapse-plate16_25
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_26

description:
3mix-timelapse-plate16_26
3mix_RNA_expression.txt


title: CD4+ T cells, KO-Th0_2


title: CD4+ T cells, KO-Th0_1


title: CD4+ T cells, WT-Th1_3

value: wild type


title: 3mix-timelapse, 3mix-timelapse-plate16_23

description:
3mix-timelapse-plate16_23
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_24

description:
3mix-timelapse-plate16_24
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_22

description:
3mix-timelapse-plate16_22
3mix_RNA_expression.txt


title: CD4+ T cells, WT-Th1_1


title: 3mix-timelapse, 3mix-timelapse-plate16_21

description:
3mix-timelapse-plate16_21
3mix_RNA_expression.txt


title: CD4+ T cells, WT-Th1_2


title: CD4+ T cells, WT-Th0_3


title: 3mix-timelapse, 3mix-timelapse-plate16_20

description:
3mix-timelapse-plate16_20
3mix_RNA_expression.txt


title: CD4+ T cells, KO-Th1_1


title: PBMC-timelapse, PBMC-timelapse-plate8_96

description:
PBMC-timelapse-plate8_96
PBMC_RNA_expression.txt

source_name: Murine PBMCs

value: C57BL/6J mouse

value: PBMC


title: 3mix-timelapse, 3mix-timelapse-plate16_16

description:
3mix-timelapse-plate16_16
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_19

description:
3mix-timelapse-plate16_19
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_28

description:
3mix-timelapse-plate16_28
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_18

description:
3mix-timelapse-plate16_18
3mix_RNA_expression.txt


title: PBMC-timelapse, PBMC-timelapse-plate8_94

description:
PBMC-timelapse-plate8_94
PBMC_RNA_expression.txt


title: CD4+ T cells, KO-Th0_3


title: 3mix-timelapse, 3mix-timelapse-plate16_15

description:
3mix-timelapse-plate16_15
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_13

description:
3mix-timelapse-plate16_13
3mix_RNA_expression.txt


title: PBMC-timelapse, PBMC-timelapse-plate8_93

description:
PBMC-timelapse-plate8_93
PBMC_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_11

description:
3mix-timelapse-plate16_11
3mix_RNA_expression.txt


title: PBMC-timelapse, PBMC-timelapse-plate8_92

description:
PBMC-timelapse-plate8_92
PBMC_RNA_expression.txt


title: PBMC-timelapse, PBMC-timelapse-plate8_90

description:
PBMC-timelapse-plate8_90
PBMC_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_14

description:
3mix-timelapse-plate16_14
3mix_RNA_expression.txt


title: PBMC-timelapse, PBMC-timelapse-plate8_89

description:
PBMC-timelapse-plate8_89
PBMC_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_10

description:
3mix-timelapse-plate16_10
3mix_RNA_expression.txt


title: PBMC-timelapse, PBMC-timelapse-plate8_91

description:
PBMC-timelapse-plate8_91
PBMC_RNA_expression.txt


title: CD4+ T cells, WT-Th0_2


title: 3mix-timelapse, 3mix-timelapse-plate16_8

description:
3mix-timelapse-plate16_8
3mix_RNA_expression.txt


title: PBMC-timelapse, PBMC-timelapse-plate8_87

description:
PBMC-timelapse-plate8_87
PBMC_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_9

description:
3mix-timelapse-plate16_9
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_7

description:
3mix-timelapse-plate16_7
3mix_RNA_expression.txt


title: CD4+ T cells, WT-Th0_1


title: PBMC-timelapse, PBMC-timelapse-plate8_88

description:
PBMC-timelapse-plate8_88
PBMC_RNA_expression.txt


title: PBMC-timelapse, PBMC-timelapse-plate8_85

description:
PBMC-timelapse-plate8_85
PBMC_RNA_expression.txt


title: PBMC-timelapse, PBMC-timelapse-plate8_84

description:
PBMC-timelapse-plate8_84
PBMC_RNA_expression.txt


title: PBMC-timelapse, PBMC-timelapse-plate8_95

description:
PBMC-timelapse-plate8_95
PBMC_RNA_expression.txt


title: PBMC-timelapse, PBMC-timelapse-plate8_86

description:
PBMC-timelapse-plate8_86
PBMC_RNA_expression.txt


title: PBMC-timelapse, PBMC-timelapse-plate8_82

description:
PBMC-timelapse-plate8_82
PBMC_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_17

description:
3mix-timelapse-plate16_17
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_5

description:
3mix-timelapse-plate16_5
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_6

description:
3mix-timelapse-plate16_6
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_4

description:
3mix-timelapse-plate16_4
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_3

description:
3mix-timelapse-plate16_3
3mix_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_12

description:
3mix-timelapse-plate16_12
3mix_RNA_expression.txt


title: PBMC-timelapse, PBMC-timelapse-plate8_83

description:
PBMC-timelapse-plate8_83
PBMC_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate16_1

description:
3mix-timelapse-plate16_1
3mix_RNA_expression.txt


title: PBMC-timelapse, PBMC-timelapse-plate8_80

description:
PBMC-timelapse-plate8_80
PBMC_RNA_expression.txt


title: PBMC-timelapse, PBMC-timelapse-plate8_81

description:
PBMC-timelapse-plate8_81
PBMC_RNA_expression.txt


title: PBMC-timelapse, PBMC-timelapse-plate8_79

description:
PBMC-timelapse-plate8_79
PBMC_RNA_expression.txt


title: PBMC-timelapse, PBMC-timelapse-plate8_78

description:
PBMC-timelapse-plate8_78
PBMC_RNA_expression.txt


title: 3mix-timelapse, 3mix-timelapse-plate15_96

description:
3mix-timelapse-plate15_96
3mix_RNA_expression.txt