title: hASPS_siNC_H3K27ac

city: Tokyo

first: Takuro

address: 3-8-31 Ariake, Koto-ku

department: The Cancer Institute

institute: Japanese Foundation for Cancer Research

data_processing:
Base calls were performed using Bowtie 2.
ChIP-seq reads were aligned to the mm9 or hg19 genome assembly using samtools 1.2.
Peak call was performed using MACS1.4.
Genome_build: mm9 (mouse) and hg19 (human)
Supplementary_files_format_and_content: For every 300 bp window, the mapped tag count for ChIP, Cc and that for Input, Ci were used for calculation. Ec and Ei indicates the estimate count for 300 bp window for ChIP and Input. Signal ratio of ‘target TF’ was calculated as, Cc/Ec + 1 ÷ Max (1, Ci/Ei + 1).

source_name: Alveolar soft part sarcoma

growth_protocol: Mouse and human ASPS cells were grown in IMDM supplemented with 10% fetal bovine serum (FBS) and RPMI-1640 supplemented with 10% FBS, respectively.

extract_protocol:
Lysates were clarified from sonicated nuclei and immunoprecipitated with each antibodies
Libraries were prepared according to Illumina's instructions accompanying the ThruPLEX DNA-seq 6S (12) Kit (R400523). Briefly, DNA was end-repaired using a combination of T4 DNA polymerase, E. coli DNA Pol I large fragment (Klenow polymerase) and T4 polynucleotide kinase. The blunt, phosphorylated ends were treated with Klenow fragment (32 to 52 exo minus) and dATP to yield a protruding 3- 'A' base for ligation of Illumina's adapters which have a single 'T' base overhang at the 3’ end. After adapter ligation DNA was PCR amplified with Illumina primers for 15 cycles and library fragments of ~250 bp (insert plus adaptor and PCR primer sequences) were band isolated from an agarose gel. The purified DNA was captured on an Illumina flow cell for cluster generation. Libraries were sequenced on the Genome Analyzer following the manufacturer's protocols.

treatment_protocol: Mouse ASPS cells were treated with 100 nM JQ1 for 48 hours. Small interfering RNA-mediated gene silencing of human ASPS cells was performed.

tag: cell type/genotype

value: Human alveolar soft part sarcoma cells

tag: strain/cell line

value: ASPS-KY

tag: antibody

value: Histone H3K27ac (Active Motif, 39133, lot 16119013)

value: hASPS cells treated with siNC


title: hASPS_input

status: Public on Jan 16 2023

type: SRA

last: Nakamura

country: Japan

library_source: genomic

molecule: genomic DNA

organism: Homo sapiens


title: whole blood, PT5-preART

type: genomic

city: Madrid

first: Juan

middle: Carlos

last: Silla-Castro

address: Melchor Fernandez Almagro 3

department: Bioinformatics

country: Spain

institute: CNIC

hyb_protocol: bisulfite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human MethylationEPIC Beadchip using standard Illumina protocol

scan_protocol: Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting

data_processing:
BeadStudio software v3.2
preprocessSheet.tsv:  snoob normalized beta values
signalSheet.tsv:  Unmethylated and methylated signal intensities

label: bisulfite converted

label_protocol: Standard Illumina Protocol

extract_protocol: genomic DNA was extracted and purified from Whole Blood samples using the MagPurix Blood DNA Extraction Kit 200  according to standard instructions

tag: individual

tag: gender

value: male

tag: age

tag: treatment

value: NO

tag: week

tag: tissue

value: whole blood

tag: time

value: sample pre ART


title: whole blood, PT7-postART

value: YES

value: sample post ART


title: hASPS ASPSCR1_2

description: ASPSCR1 (Sigma-Aldrich, HPA026749, lot R12203)

data_processing:
Base calls were performed using Bowtie 2.
ChIP-seq reads were aligned to the mm9 or hg19 genome assembly using samtools 1.2.
Peak call was performed using MACS1.4.
Assembly: mm9 (mouse) and hg19 (human)
Supplementary files format and content: For every 300 bp window, the mapped tag count for ChIP, Cc and that for Input, Ci were used for calculation. Ec and Ei indicates the estimate count for 300 bp window for ChIP and Input. Signal ratio of ‘target TF’ was calculated as, Cc/Ec + 1 ÷ Max (1, Ci/Ei + 1).

source_name: ASPS-KY

treatment_protocol: Mouse and human ASPS cells were treated with 100 nM JQ1 for 48 hours. Small interfering RNA-mediated gene silencing of human ASPS cells was performed.

tag: cell line

tag: cell type

value: human alveolar soft part sarcoma


title: hASPS_siTFE3_H3K27ac

value: hASPS cells treated with siTFE3


title: hASPS siTFE3 K27Ac_3

description: Histone H3K27ac (Active Motif, 39133, lot 16119013)


title: hASPS ASPSCR1_3


title: hASPS siTFE3 ASPSCR1


title: whole blood, PT8-postART

value: female


title: hASPS siTFE3 K27Ac_2


title: hASPS_H3K27me3

value: Histone H3K27me3 (Abcam, ab6002, lot GR3232152-1)


title: hASPS_ASPSCR1-TFE3

value: ASPSCR1 (Sigma-Aldrich, HPA026749, lot R12203)


title: hASPS_H3K4me3

value: Histon H3K4Me3 (Abcam, ab8580, lot GR3263891-1)


title: hASPS_H3K27ac


title: whole blood, PT13-postART


title: um_berninger_2018_01_384_p4_H12_1c_S384

city: Biberach an der Riss

first: Gregorio

last: Alanis-Lobato

address: Birkendorfer Str 65

department: Global Computational Biology and Digital Sciences

country: Germany

institute: Boehringer Ingelheim Pharma

description:
Yap-d07
expression of Yap1 in adult neural stem cells for 7 days

library_source: transcriptomic

data_processing:
Smart-Seq2 raw data demultiplexing was performed using Illumina’s bcl2fastq conversion software v.2.19.1 and overall sequence quality was assessed with FastQC v0.11.5. .
STAR v.2.5.2b with default parameters (except –outFilterMismatchNoverLmax 0.04) was used to align reads to the mouse reference genome GRCm38 (mm10), which was supplemented with ERCC RNA Spike-In Mix (ThermoFischer) control sequences and the GTF gene annotation from Ensembl release 88.
Read summarization at the gene level was performed using Subread featureCounts v.1.6.2 with default parameters.
Genome_build: GRCm38 with ERCC control sequences
Supplementary_files_format_and_content: Raw count matrix with genes in rows and cells in columns

molecule: polyA RNA

organism: Mus musculus

source_name: adult neural stem cell

growth_protocol: Mice were administrated with lentivirus which encode EGFP or Yap1 5SA. DG was dissected from hippocampus and the tissue was enzymatically dissociated in Neural Tissue Dissociation Kit (Miltenyi Biotec, Germany). Dissociation was stopped by adding 10 ml HBSS (Ca+, Mg+) (Invitrogen). Cells were filtered by 70 µm cell strainer, then centrifuged at 300 g for 10 min.  Single cell suspension was resuspended with PBS which contains 5% FBS.

extract_protocol:
All the EGFP positive cells were collected into lysis buffer of 96-wells plates directly by Aria II SORP cell sorter at single cell sorting mode.
Libraries were prepared using the Illumina Nextera XT DNA sample preparation kit. The protocol is based on the Tagmentation protocol from Fluidigm, which uses ¼ of the reagents per tagmentation reaction with a starting amount of 100-125pg of cDNA. Through this tagmentation step, the cDNA is fragmented and partial Nextera adaptors are added to each end of the cDNA fragments. A PCR follows, which adds the rest of the Nextera adaptors and the i5 and i7 dual indexes. Libraries were amplified in 12 PCR cycles. Three microliters of each library were pooled into a single tube and the pool was subsequently bead purified using Agencout AMPure XP beads, with a ratio of 0.9:1 Beads:DNA.   The purified pool was profiled in a High Sensitivity DNA chip on a 2100 Bioanalyzer (Agilent technologies) and quantified using the Qubit dsDNA HS Assay Kit, in a Qubit 2.0 Fluorometer (Life technologies).   Four pools (coming from four 96-well plates) are again pooled together in equimolar ratio and sequenced in a single NextSeq 500 Highoutput Flowcell, single read for 1x 75 cycles for read 1 plus 2x 8 cycles for each index read.
scRNA-Seq

value: adult neural stem cell

value: Yap1 overexpression

tag: days post-treatment


title: um_berninger_2018_01_379_p8_C12_1c_S379


title: um_berninger_2018_01_383_p8_G12_1c_S383


title: um_berninger_2018_01_382_p8_F12_1c_S382


title: um_berninger_2018_01_380_p4_D12_1c_S380


title: um_berninger_2018_01_380_p8_D12_1c_S380


title: um_berninger_2018_01_381_p4_E12_1c_S381


title: um_berninger_2018_01_383_p4_G12_1c_S383


title: um_berninger_2018_01_384_p8_H12_1c_S384


title: um_berninger_2018_01_382_p4_F12_1c_S382


title: um_berninger_2018_01_378_p4_B12_1c_S378


title: WT_control_rep2

type: RNA

city: Kanazawa

first: Takumi

last: Nishiuchi

address: 13-1 Takaramachi

institute: Kanazawa University

description: Gene expression of WT leaves without flg22 treatment

hyb_protocol: 1.65 ug of Cy3-labelled cRNA (specific activity >10.0 pmol Cy3/ug cRNA) was fragmented at 60°C for 30 minutes in a reaction volume of 55 ul containing 1x Agilent fragmentation buffer and 2x Agilent blocking agent following the manufacturers instructions. On completion of the fragmentation reaction, 55 ul of 2x Agilent hybridization buffer was added to the fragmentation mixture and hybridized to Agilent Whole Rat Genome Microarray 4x44K (G4131F) for 17 hours at 65°C in a rotating Agilent hybridization oven.  After hybridization, microarrays were washed 1 minute at room temperature with GE Wash Buffer 1 (Agilent) and 1 minute with 37°C GE Wash buffer 2 (Agilent), then dried by raise it slowly from buffer 2.

scan_protocol: Slides were scanned immediately after washing on the Agilent DNA Microarray Scanner (G2565BA) using one color scan setting for 4x44k array slides (Scan Area 61x21.6 mm, Scan resolution 5um, Dye channel is set to Green. Scan mode is eXtended Dynamic range Scan mode and PMT is set to 10% and 100%).

data_processing: The images were analyzed using Feature Extraction Software (Ver. 10.7.3.1; Agilent Technologies). These data were analyzed further with GeneSpring GX12.1 software (Agilent Technologies).  Normalization was performed as follows: 1, intensity-dependent Lowess normalization; 2, data transformation, with measurements less than 0.01 set to 0.01; 3, per-chip normalization, in which the 75th percentile method was used to normalize each array

molecule: total RNA

organism: Arabidopsis thaliana

label_protocol: Cyanine-3 (Cy3) labeled cRNA was prepared from 200 ng RNA using the Low RNA Input  Quick Amp kit (Agilent) according to the manufacturer's instructions, followed by RNAeasy column purification (QIAGEN, Valencia, CA).  Dye incorporation and cRNA yield were checked with the NanoDrop ND-1000 Spectrophotometer.

growth_protocol: Plants were grown for 14days on GM medium at 22oC.

extract_protocol: After sampling, total RNA was extracted by using NucleoSpin® RNA Plant (MACHEREY-NAGEL). 200 ng of total RNAs were used to prepare Cy3-labeled cRNA, using a Low Input Quick Amp Labeling Kit (Agilent Technologies).

treatment_protocol: Seedlings were treated with 0.1μM flg22 for 0hr or 4hr. Samples were frozen in liquid nitrogen.

tag: developmental stage

value: two-week-old seedlings

tag: genotype

value: WT (Landsberg erecta)

tag: time post inoculation

value: 0 h

tag: inoculated leaves with alternaria brassicicola

value: untreated


title: um_berninger_2018_01_379_p4_C12_1c_S379


title: smn2-90_flg22_rep2

description: Gene expression of smn2-90 leaves with flg22 treatment

value: smn2-90(Landsberg erecta)

value: 4 h

value: treated with flg22


title: smn2-90_control_rep2

description: Gene expression of smn2-90 leaves without flg22 treatment


title: um_berninger_2018_01_378_p8_B12_1c_S378


title: um_berninger_2018_01_377_p8_A12_1c_S377


title: um_berninger_2018_01_376_p4_H11_1c_S376

description:
Control-d07
expression of control virus in adult neural stem cells for 7 days

value: control virus


title: um_berninger_2018_01_376_p8_H11_1c_S376


title: smn2-90_flg22_rep1


title: um_berninger_2018_01_375_p8_G11_1c_S375


title: WT_flg22_rep1

description: Gene expression of WT leaves with flg22 treatment


title: WT_control_rep1


title: um_berninger_2018_01_375_p4_G11_1c_S375


title: smn2-90_control_rep1


title: um_berninger_2018_01_374_p8_F11_1c_S374


title: WT_flg22_rep2


title: um_berninger_2018_01_377_p4_A12_1c_S377


title: um_berninger_2018_01_381_p8_E12_1c_S381


title: um_berninger_2018_01_374_p4_F11_1c_S374


title: um_berninger_2018_01_373_p4_E11_1c_S373


title: um_berninger_2018_01_371_p4_C11_1c_S371


title: um_berninger_2018_01_373_p8_E11_1c_S373


title: um_berninger_2018_01_372_p4_D11_1c_S372


title: um_berninger_2018_01_372_p8_D11_1c_S372


title: um_berninger_2018_01_371_p8_C11_1c_S371


title: um_berninger_2018_01_370_p4_B11_1c_S370


title: um_berninger_2018_01_369_p4_A11_1c_S369


title: um_berninger_2018_01_367_p8_G10_1c_S367


title: um_berninger_2018_01_369_p8_A11_1c_S369


title: um_berninger_2018_01_370_p8_B11_1c_S370


title: um_berninger_2018_01_368_p8_H10_1c_S368


title: um_berninger_2018_01_368_p4_H10_1c_S368


title: um_berninger_2018_01_364_p8_D10_1c_S364


title: um_berninger_2018_01_366_p8_F10_1c_S366


title: um_berninger_2018_01_366_p4_F10_1c_S366


title: um_berninger_2018_01_367_p4_G10_1c_S367


title: um_berninger_2018_01_362_p4_B10_1c_S362


title: um_berninger_2018_01_365_p4_E10_1c_S365


title: um_berninger_2018_01_364_p4_D10_1c_S364


title: um_berninger_2018_01_363_p8_C10_1c_S363


title: um_berninger_2018_01_362_p8_B10_1c_S362


title: um_berninger_2018_01_361_p4_A10_1c_S361


title: um_berninger_2018_01_360_p4_H09_1c_S360


title: um_berninger_2018_01_361_p8_A10_1c_S361


title: um_berninger_2018_01_360_p8_H09_1c_S360


title: um_berninger_2018_01_359_p8_G09_1c_S359


title: um_berninger_2018_01_359_p4_G09_1c_S359


title: um_berninger_2018_01_358_p8_F09_1c_S358


title: um_berninger_2018_01_357_p8_E09_1c_S357


title: um_berninger_2018_01_357_p4_E09_1c_S357


title: um_berninger_2018_01_365_p8_E10_1c_S365


title: um_berninger_2018_01_356_p8_D09_1c_S356


title: um_berninger_2018_01_358_p4_F09_1c_S358


title: um_berninger_2018_01_355_p8_C09_1c_S355


title: um_berninger_2018_01_354_p8_B09_1c_S354


title: um_berninger_2018_01_355_p4_C09_1c_S355


title: um_berninger_2018_01_353_p8_A09_1c_S353


title: um_berninger_2018_01_363_p4_C10_1c_S363


title: um_berninger_2018_01_354_p4_B09_1c_S354


title: um_berninger_2018_01_356_p4_D09_1c_S356


title: um_berninger_2018_01_351_p8_G08_1c_S351


title: um_berninger_2018_01_353_p4_A09_1c_S353


title: um_berninger_2018_01_351_p4_G08_1c_S351


title: um_berninger_2018_01_352_p8_H08_1c_S352


title: um_berninger_2018_01_350_p8_F08_0c_S350

description:
Yap-d07
sample for QC diagnostics

source_name: empty well

value: empty well


title: um_berninger_2018_01_349_p8_E08_10c_S349

description:
Yap-d07
sample for QC diagnostics

source_name: 10 adult neural stem cells


title: um_berninger_2018_01_348_p4_D08_1c_S348


title: um_berninger_2018_01_347_p4_C08_1c_S347


title: um_berninger_2018_01_352_p4_H08_1c_S352


title: um_berninger_2018_01_350_p4_F08_0c_S350

description:
Yap-d07
sample for QC diagnostics


title: um_berninger_2018_01_347_p8_C08_1c_S347


title: um_berninger_2018_01_346_p8_B08_1c_S346


title: um_berninger_2018_01_345_p8_A08_1c_S345


title: um_berninger_2018_01_346_p4_B08_1c_S346


title: um_berninger_2018_01_349_p4_E08_10c_S349

description:
Yap-d07
sample for QC diagnostics


title: um_berninger_2018_01_345_p4_A08_1c_S345


title: um_berninger_2018_01_343_p8_G07_1c_S343


title: um_berninger_2018_01_344_p4_H07_1c_S344


title: um_berninger_2018_01_343_p4_G07_1c_S343


title: um_berninger_2018_01_342_p4_F07_1c_S342


title: um_berninger_2018_01_342_p8_F07_1c_S342


title: um_berninger_2018_01_341_p4_E07_1c_S341


title: um_berninger_2018_01_339_p8_C07_1c_S339


title: um_berninger_2018_01_340_p4_D07_1c_S340


title: um_berninger_2018_01_348_p8_D08_1c_S348


title: um_berninger_2018_01_339_p4_C07_1c_S339


title: um_berninger_2018_01_340_p8_D07_1c_S340


title: um_berninger_2018_01_338_p4_B07_1c_S338


title: um_berninger_2018_01_338_p8_B07_1c_S338


title: um_berninger_2018_01_336_p8_H06_1c_S336


title: um_berninger_2018_01_334_p8_F06_1c_S334


title: um_berninger_2018_01_335_p8_G06_1c_S335


title: um_berninger_2018_01_336_p4_H06_1c_S336


title: um_berninger_2018_01_335_p4_G06_1c_S335


title: um_berninger_2018_01_337_p4_A07_1c_S337


title: um_berninger_2018_01_333_p8_E06_1c_S333


title: um_berninger_2018_01_334_p4_F06_1c_S334


title: um_berninger_2018_01_344_p8_H07_1c_S344


title: um_berninger_2018_01_333_p4_E06_1c_S333


title: um_berninger_2018_01_330_p8_B06_1c_S330


title: um_berninger_2018_01_331_p8_C06_1c_S331


title: um_berninger_2018_01_332_p8_D06_1c_S332


title: um_berninger_2018_01_332_p4_D06_1c_S332


title: um_berninger_2018_01_331_p4_C06_1c_S331


title: um_berninger_2018_01_329_p8_A06_1c_S329


title: um_berninger_2018_01_337_p8_A07_1c_S337


title: um_berninger_2018_01_330_p4_B06_1c_S330


title: um_berninger_2018_01_341_p8_E07_1c_S341


title: um_berninger_2018_01_328_p8_H05_1c_S328


title: um_berninger_2018_01_328_p4_H05_1c_S328


title: um_berninger_2018_01_329_p4_A06_1c_S329


title: um_berninger_2018_01_326_p4_F05_0c_S326

description:
Control-d07
sample for QC diagnostics


title: um_berninger_2018_01_327_p8_G05_1c_S327


title: um_berninger_2018_01_325_p4_E05_10c_S325

description:
Control-d07
sample for QC diagnostics


title: um_berninger_2018_01_326_p8_F05_0c_S326

description:
Control-d07
sample for QC diagnostics


title: um_berninger_2018_01_327_p4_G05_1c_S327


title: um_berninger_2018_01_325_p8_E05_10c_S325

description:
Control-d07
sample for QC diagnostics


title: um_berninger_2018_01_324_p4_D05_1c_S324


title: um_berninger_2018_01_323_p8_C05_1c_S323


title: um_berninger_2018_01_322_p4_B05_1c_S322


title: um_berninger_2018_01_323_p4_C05_1c_S323


title: um_berninger_2018_01_321_p8_A05_1c_S321


title: um_berninger_2018_01_321_p4_A05_1c_S321


title: um_berninger_2018_01_320_p8_H04_1c_S320


title: um_berninger_2018_01_318_p4_F04_1c_S318


title: um_berninger_2018_01_318_p8_F04_1c_S318


title: um_berninger_2018_01_319_p4_G04_1c_S319


title: um_berninger_2018_01_317_p4_E04_1c_S317


title: um_berninger_2018_01_320_p4_H04_1c_S320


title: um_berninger_2018_01_317_p8_E04_1c_S317


title: um_berninger_2018_01_316_p8_D04_1c_S316


title: um_berninger_2018_01_316_p4_D04_1c_S316


title: um_berninger_2018_01_319_p8_G04_1c_S319


title: um_berninger_2018_01_324_p8_D05_1c_S324


title: um_berninger_2018_01_312_p8_H03_1c_S312


title: um_berninger_2018_01_312_p4_H03_1c_S312


title: um_berninger_2018_01_313_p4_A04_1c_S313


title: um_berninger_2018_01_313_p8_A04_1c_S313


title: um_berninger_2018_01_315_p8_C04_1c_S315


title: um_berninger_2018_01_314_p8_B04_1c_S314


title: um_berninger_2018_01_314_p4_B04_1c_S314


title: um_berninger_2018_01_311_p8_G03_1c_S311


title: um_berninger_2018_01_311_p4_G03_1c_S311


title: um_berninger_2018_01_310_p4_F03_1c_S310


title: um_berninger_2018_01_308_p4_D03_1c_S308


title: um_berninger_2018_01_309_p4_E03_1c_S309


title: um_berninger_2018_01_310_p8_F03_1c_S310


title: um_berninger_2018_01_309_p8_E03_1c_S309


title: um_berninger_2018_01_307_p8_C03_1c_S307


title: um_berninger_2018_01_307_p4_C03_1c_S307


title: um_berninger_2018_01_306_p8_B03_1c_S306


title: um_berninger_2018_01_306_p4_B03_1c_S306


title: um_berninger_2018_01_305_p4_A03_1c_S305


title: um_berninger_2018_01_305_p8_A03_1c_S305


title: um_berninger_2018_01_304_p8_H02_1c_S304


title: um_berninger_2018_01_304_p4_H02_1c_S304


title: um_berninger_2018_01_315_p4_C04_1c_S315


title: um_berninger_2018_01_322_p8_B05_1c_S322


title: um_berninger_2018_01_302_p8_F02_1c_S302


title: um_berninger_2018_01_303_p4_G02_1c_S303


title: um_berninger_2018_01_302_p4_F02_1c_S302


title: um_berninger_2018_01_301_p4_E02_1c_S301


title: um_berninger_2018_01_300_p8_D02_1c_S300


title: um_berninger_2018_01_301_p8_E02_1c_S301


title: um_berninger_2018_01_299_p8_C02_1c_S299


title: um_berninger_2018_01_308_p8_D03_1c_S308


title: um_berninger_2018_01_298_p8_B02_1c_S298


title: um_berninger_2018_01_300_p4_D02_1c_S300


title: um_berninger_2018_01_299_p4_C02_1c_S299


title: um_berninger_2018_01_297_p8_A02_1c_S297


title: um_berninger_2018_01_297_p4_A02_1c_S297


title: um_berninger_2018_01_296_p8_H01_1c_S296


title: um_berninger_2018_01_296_p4_H01_1c_S296


title: um_berninger_2018_01_295_p8_G01_1c_S295


title: um_berninger_2018_01_295_p4_G01_1c_S295


title: um_berninger_2018_01_298_p4_B02_1c_S298


title: um_berninger_2018_01_294_p4_F01_1c_S294


title: um_berninger_2018_01_294_p8_F01_1c_S294


title: um_berninger_2018_01_292_p8_D01_1c_S292


title: um_berninger_2018_01_303_p8_G02_1c_S303


title: um_berninger_2018_01_292_p4_D01_1c_S292


title: um_berninger_2018_01_290_p8_B01_1c_S290


title: um_berninger_2018_01_293_p4_E01_1c_S293


title: um_berninger_2018_01_290_p4_B01_1c_S290


title: um_berninger_2018_01_291_p8_C01_1c_S291


title: um_berninger_2018_01_291_p4_C01_1c_S291


title: um_berninger_2018_01_289_p8_A01_1c_S289


title: um_berninger_2018_01_289_p4_A01_1c_S289


title: um_berninger_2018_01_288_p3_H12_1c_S288


title: um_berninger_2018_01_287_p7_G12_1c_S287


title: um_berninger_2018_01_285_p7_E12_1c_S285


title: um_berninger_2018_01_285_p3_E12_1c_S285


title: um_berninger_2018_01_286_p3_F12_1c_S286


title: um_berninger_2018_01_286_p7_F12_1c_S286


title: um_berninger_2018_01_284_p3_D12_1c_S284


title: um_berninger_2018_01_284_p7_D12_1c_S284


title: um_berninger_2018_01_281_p3_A12_1c_S281


title: um_berninger_2018_01_282_p3_B12_1c_S282


title: um_berninger_2018_01_280_p7_H11_1c_S280


title: um_berninger_2018_01_281_p7_A12_1c_S281


title: um_berninger_2018_01_279_p7_G11_1c_S279


title: um_berninger_2018_01_283_p3_C12_1c_S283


title: um_berninger_2018_01_278_p7_F11_1c_S278


title: um_berninger_2018_01_288_p7_H12_1c_S288


title: um_berninger_2018_01_280_p3_H11_1c_S280


title: um_berninger_2018_01_277_p7_E11_1c_S277


title: um_berninger_2018_01_276_p7_D11_1c_S276


title: um_berninger_2018_01_276_p3_D11_1c_S276


title: um_berninger_2018_01_278_p3_F11_1c_S278


title: um_berninger_2018_01_287_p3_G12_1c_S287


title: um_berninger_2018_01_277_p3_E11_1c_S277


title: um_berninger_2018_01_275_p7_C11_1c_S275


title: um_berninger_2018_01_275_p3_C11_1c_S275


title: um_berninger_2018_01_274_p3_B11_1c_S274


title: um_berninger_2018_01_273_p7_A11_1c_S273


title: um_berninger_2018_01_282_p7_B12_1c_S282


title: um_berninger_2018_01_274_p7_B11_1c_S274


title: um_berninger_2018_01_293_p8_E01_1c_S293


title: um_berninger_2018_01_279_p3_G11_1c_S279


title: um_berninger_2018_01_272_p7_H10_1c_S272


title: um_berninger_2018_01_271_p3_G10_1c_S271


title: um_berninger_2018_01_270_p3_F10_1c_S270


title: um_berninger_2018_01_273_p3_A11_1c_S273


title: um_berninger_2018_01_269_p7_E10_1c_S269


title: um_berninger_2018_01_268_p3_D10_1c_S268


title: um_berninger_2018_01_267_p3_C10_1c_S267


title: um_berninger_2018_01_267_p7_C10_1c_S267


title: um_berninger_2018_01_271_p7_G10_1c_S271


title: um_berninger_2018_01_264_p7_H09_1c_S264


title: um_berninger_2018_01_270_p7_F10_1c_S270


title: um_berninger_2018_01_269_p3_E10_1c_S269


title: um_berninger_2018_01_268_p7_D10_1c_S268


title: um_berninger_2018_01_266_p3_B10_1c_S266


title: um_berninger_2018_01_265_p3_A10_1c_S265


title: um_berninger_2018_01_263_p3_G09_1c_S263


title: um_berninger_2018_01_263_p7_G09_1c_S263


title: um_berninger_2018_01_262_p3_F09_1c_S262


title: um_berninger_2018_01_272_p3_H10_1c_S272


title: um_berninger_2018_01_266_p7_B10_1c_S266


title: um_berninger_2018_01_262_p7_F09_1c_S262


title: um_berninger_2018_01_260_p7_D09_1c_S260


title: um_berninger_2018_01_261_p7_E09_1c_S261


title: um_berninger_2018_01_259_p3_C09_1c_S259


title: um_berninger_2018_01_258_p7_B09_1c_S258


title: um_berninger_2018_01_265_p7_A10_1c_S265


title: um_berninger_2018_01_261_p3_E09_1c_S261


title: um_berninger_2018_01_259_p7_C09_1c_S259


title: um_berninger_2018_01_264_p3_H09_1c_S264


title: um_berninger_2018_01_258_p3_B09_1c_S258


title: um_berninger_2018_01_257_p3_A09_1c_S257


title: um_berninger_2018_01_257_p7_A09_1c_S257


title: um_berninger_2018_01_256_p7_H08_1c_S256


title: um_berninger_2018_01_255_p7_G08_1c_S255


title: um_berninger_2018_01_256_p3_H08_1c_S256


title: um_berninger_2018_01_254_p7_F08_0c_S254

description:
Yap-d07
sample for QC diagnostics


title: um_berninger_2018_01_260_p3_D09_1c_S260


title: um_berninger_2018_01_251_p7_C08_1c_S251


title: um_berninger_2018_01_250_p7_B08_1c_S250


title: um_berninger_2018_01_253_p3_E08_10c_S253

description:
Yap-d07
sample for QC diagnostics


title: um_berninger_2018_01_252_p7_D08_1c_S252


title: um_berninger_2018_01_254_p3_F08_0c_S254

description:
Yap-d07
sample for QC diagnostics


title: um_berninger_2018_01_253_p7_E08_10c_S253

description:
Yap-d07
sample for QC diagnostics


title: um_berninger_2018_01_249_p3_A08_1c_S249


title: um_berninger_2018_01_249_p7_A08_1c_S249


title: um_berninger_2018_01_248_p7_H07_1c_S248


title: um_berninger_2018_01_250_p3_B08_1c_S250


title: um_berninger_2018_01_247_p7_G07_1c_S247


title: um_berninger_2018_01_247_p3_G07_1c_S247


title: um_berninger_2018_01_248_p3_H07_1c_S248


title: um_berninger_2018_01_246_p7_F07_0c_S246

description:
Control-d07
sample for QC diagnostics


title: um_berninger_2018_01_246_p3_F07_0c_S246

description:
Control-d07
sample for QC diagnostics


title: um_berninger_2018_01_245_p7_E07_10c_S245

description:
Control-d07
sample for QC diagnostics


title: um_berninger_2018_01_255_p3_G08_1c_S255


title: um_berninger_2018_01_243_p7_C07_1c_S243


title: um_berninger_2018_01_244_p3_D07_1c_S244


title: um_berninger_2018_01_244_p7_D07_1c_S244


title: um_berninger_2018_01_245_p3_E07_10c_S245

description:
Control-d07
sample for QC diagnostics


title: um_berninger_2018_01_243_p3_C07_1c_S243


title: um_berninger_2018_01_252_p3_D08_1c_S252


title: um_berninger_2018_01_242_p3_B07_1c_S242


title: um_berninger_2018_01_251_p3_C08_1c_S251


title: um_berninger_2018_01_241_p3_A07_1c_S241


title: um_berninger_2018_01_240_p7_H06_1c_S240


title: um_berninger_2018_01_239_p7_G06_1c_S239


title: um_berninger_2018_01_240_p3_H06_1c_S240


title: um_berninger_2018_01_237_p7_E06_1c_S237


title: um_berninger_2018_01_235_p3_C06_1c_S235


title: um_berninger_2018_01_237_p3_E06_1c_S237


title: um_berninger_2018_01_236_p3_D06_1c_S236


title: um_berninger_2018_01_236_p7_D06_1c_S236


title: um_berninger_2018_01_234_p7_B06_1c_S234


title: um_berninger_2018_01_234_p3_B06_1c_S234


title: um_berninger_2018_01_233_p7_A06_1c_S233


title: um_berninger_2018_01_233_p3_A06_1c_S233


title: um_berninger_2018_01_232_p7_H05_1c_S232


title: um_berninger_2018_01_232_p3_H05_1c_S232


title: um_berninger_2018_01_230_p3_F05_0c_S230

description:
Control-d07
sample for QC diagnostics


title: um_berninger_2018_01_231_p7_G05_1c_S231


title: um_berninger_2018_01_242_p7_B07_1c_S242


title: um_berninger_2018_01_229_p7_E05_10c_S229

description:
Control-d07
sample for QC diagnostics


title: um_berninger_2018_01_231_p3_G05_1c_S231


title: um_berninger_2018_01_283_p7_C12_1c_S283


title: um_berninger_2018_01_241_p7_A07_1c_S241


title: um_berninger_2018_01_228_p3_D05_1c_S228


title: um_berninger_2018_01_227_p7_C05_1c_S227


title: um_berninger_2018_01_230_p7_F05_0c_S230

description:
Control-d07
sample for QC diagnostics


title: um_berninger_2018_01_227_p3_C05_1c_S227


title: um_berninger_2018_01_229_p3_E05_10c_S229

description:
Control-d07
sample for QC diagnostics


title: um_berninger_2018_01_226_p3_B05_1c_S226


title: um_berninger_2018_01_238_p7_F06_1c_S238


title: um_berninger_2018_01_239_p3_G06_1c_S239


title: um_berninger_2018_01_225_p7_A05_1c_S225


title: um_berninger_2018_01_225_p3_A05_1c_S225


title: um_berninger_2018_01_226_p7_B05_1c_S226


title: um_berninger_2018_01_224_p7_H04_1c_S224


title: um_berninger_2018_01_235_p7_C06_1c_S235


title: um_berninger_2018_01_238_p3_F06_1c_S238


title: um_berninger_2018_01_228_p7_D05_1c_S228


title: um_berninger_2018_01_223_p3_G04_1c_S223


title: um_berninger_2018_01_223_p7_G04_1c_S223


title: um_berninger_2018_01_222_p3_F04_1c_S222


title: um_berninger_2018_01_221_p7_E04_1c_S221


title: um_berninger_2018_01_222_p7_F04_1c_S222


title: um_berninger_2018_01_221_p3_E04_1c_S221


title: um_berninger_2018_01_220_p7_D04_1c_S220


title: um_berninger_2018_01_219_p3_C04_1c_S219


title: um_berninger_2018_01_220_p3_D04_1c_S220


title: um_berninger_2018_01_218_p3_B04_1c_S218


title: um_berninger_2018_01_217_p3_A04_1c_S217


title: um_berninger_2018_01_219_p7_C04_1c_S219


title: um_berninger_2018_01_216_p7_H03_1c_S216


title: um_berninger_2018_01_218_p7_B04_1c_S218


title: um_berninger_2018_01_217_p7_A04_1c_S217


title: um_berninger_2018_01_216_p3_H03_1c_S216


title: um_berninger_2018_01_213_p3_E03_1c_S213


title: um_berninger_2018_01_215_p3_G03_1c_S215


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title: um_berninger_2018_01_213_p7_E03_1c_S213


title: um_berninger_2018_01_215_p7_G03_1c_S215


title: um_berninger_2018_01_211_p7_C03_1c_S211


title: um_berninger_2018_01_211_p3_C03_1c_S211


title: um_berninger_2018_01_209_p7_A03_1c_S209


title: um_berninger_2018_01_212_p3_D03_1c_S212


title: um_berninger_2018_01_210_p3_B03_1c_S210


title: um_berninger_2018_01_224_p3_H04_1c_S224


title: um_berninger_2018_01_214_p7_F03_1c_S214


title: um_berninger_2018_01_210_p7_B03_1c_S210


title: um_berninger_2018_01_212_p7_D03_1c_S212


title: um_berninger_2018_01_207_p7_G02_1c_S207


title: um_berninger_2018_01_208_p3_H02_1c_S208


title: um_berninger_2018_01_207_p3_G02_1c_S207


title: um_berninger_2018_01_209_p3_A03_1c_S209


title: um_berninger_2018_01_208_p7_H02_1c_S208


title: um_berninger_2018_01_206_p3_F02_1c_S206


title: um_berninger_2018_01_205_p7_E02_1c_S205


title: um_berninger_2018_01_205_p3_E02_1c_S205


title: um_berninger_2018_01_204_p7_D02_1c_S204


title: um_berninger_2018_01_206_p7_F02_1c_S206


title: um_berninger_2018_01_203_p7_C02_1c_S203


title: um_berninger_2018_01_204_p3_D02_1c_S204


title: um_berninger_2018_01_203_p3_C02_1c_S203


title: um_berninger_2018_01_202_p3_B02_1c_S202


title: um_berninger_2018_01_199_p7_G01_1c_S199


title: um_berninger_2018_01_200_p3_H01_1c_S200


title: um_berninger_2018_01_200_p7_H01_1c_S200


title: um_berninger_2018_01_201_p3_A02_1c_S201


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title: um_berninger_2018_01_197_p7_E01_1c_S197


title: um_berninger_2018_01_195_p7_C01_1c_S195


title: um_berninger_2018_01_201_p7_A02_1c_S201


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title: um_berninger_2018_01_198_p7_F01_1c_S198


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title: um_berninger_2018_01_196_p7_D01_1c_S196


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title: um_berninger_2018_01_192_p6_H12_1c_S192


title: um_berninger_2018_01_193_p3_A01_1c_S193


title: um_berninger_2018_01_194_p3_B01_1c_S194


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title: um_berninger_2018_01_181_p2_E11_1c_S181


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title: um_berninger_2018_01_179_p6_C11_1c_S179


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title: um_berninger_2018_01_189_p6_E12_1c_S189


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title: um_berninger_2018_01_163_p6_C09_1c_S163


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title: um_berninger_2018_01_161_p2_A09_1c_S161


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title: um_berninger_2018_01_157_p2_E08_10c_S157


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title: um_berninger_2018_01_158_p2_F08_0c_S158


title: um_berninger_2018_01_156_p2_D08_1c_S156


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title: um_berninger_2018_01_157_p6_E08_10c_S157


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title: um_berninger_2018_01_155_p6_C08_1c_S155


title: um_berninger_2018_01_155_p2_C08_1c_S155


title: um_berninger_2018_01_154_p2_B08_1c_S154


title: um_berninger_2018_01_152_p6_H07_1c_S152


title: um_berninger_2018_01_151_p2_G07_1c_S151


title: um_berninger_2018_01_153_p6_A08_1c_S153


title: um_berninger_2018_01_151_p6_G07_1c_S151


title: um_berninger_2018_01_150_p6_F07_1c_S150


title: um_berninger_2018_01_152_p2_H07_1c_S152


title: um_berninger_2018_01_150_p2_F07_1c_S150


title: um_berninger_2018_01_149_p6_E07_1c_S149


title: um_berninger_2018_01_149_p2_E07_1c_S149


title: um_berninger_2018_01_159_p6_G08_1c_S159


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title: um_berninger_2018_01_148_p2_D07_1c_S148


title: um_berninger_2018_01_147_p6_C07_1c_S147


title: um_berninger_2018_01_147_p2_C07_1c_S147


title: um_berninger_2018_01_146_p2_B07_1c_S146


title: um_berninger_2018_01_153_p2_A08_1c_S153


title: um_berninger_2018_01_145_p6_A07_1c_S145


title: um_berninger_2018_01_143_p6_G06_1c_S143


title: um_berninger_2018_01_144_p6_H06_1c_S144


title: um_berninger_2018_01_142_p6_F06_1c_S142


title: um_berninger_2018_01_140_p2_D06_1c_S140


title: um_berninger_2018_01_141_p6_E06_1c_S141


title: um_berninger_2018_01_143_p2_G06_1c_S143


title: um_berninger_2018_01_145_p2_A07_1c_S145


title: um_berninger_2018_01_140_p6_D06_1c_S140


title: um_berninger_2018_01_139_p6_C06_1c_S139


title: um_berninger_2018_01_142_p2_F06_1c_S142


title: um_berninger_2018_01_138_p2_B06_1c_S138


title: um_berninger_2018_01_138_p6_B06_1c_S138


title: um_berninger_2018_01_144_p2_H06_1c_S144


title: um_berninger_2018_01_139_p2_C06_1c_S139


title: um_berninger_2018_01_137_p6_A06_1c_S137


title: um_berninger_2018_01_136_p6_H05_1c_S136


title: um_berninger_2018_01_136_p2_H05_1c_S136


title: um_berninger_2018_01_137_p2_A06_1c_S137


title: um_berninger_2018_01_135_p2_G05_1c_S135


title: um_berninger_2018_01_135_p6_G05_1c_S135


title: um_berninger_2018_01_146_p6_B07_1c_S146


title: um_berninger_2018_01_134_p6_F05_0c_S134


title: um_berninger_2018_01_134_p2_F05_0c_S134


title: um_berninger_2018_01_133_p6_E05_10c_S133


title: um_berninger_2018_01_132_p6_D05_1c_S132


title: um_berninger_2018_01_132_p2_D05_1c_S132


title: um_berninger_2018_01_133_p2_E05_10c_S133


title: um_berninger_2018_01_131_p2_C05_1c_S131


title: um_berninger_2018_01_141_p2_E06_1c_S141


title: um_berninger_2018_01_131_p6_C05_1c_S131


title: um_berninger_2018_01_130_p6_B05_1c_S130


title: um_berninger_2018_01_129_p6_A05_1c_S129


title: um_berninger_2018_01_127_p2_G04_1c_S127


title: um_berninger_2018_01_127_p6_G04_1c_S127


title: um_berninger_2018_01_128_p6_H04_1c_S128


title: um_berninger_2018_01_128_p2_H04_1c_S128


title: um_berninger_2018_01_126_p6_F04_1c_S126


title: um_berninger_2018_01_125_p2_E04_1c_S125


title: um_berninger_2018_01_125_p6_E04_1c_S125


title: um_berninger_2018_01_124_p2_D04_1c_S124


title: um_berninger_2018_01_123_p6_C04_1c_S123


title: um_berninger_2018_01_123_p2_C04_1c_S123


title: um_berninger_2018_01_122_p2_B04_1c_S122


title: um_berninger_2018_01_122_p6_B04_1c_S122


title: um_berninger_2018_01_121_p6_A04_1c_S121


title: um_berninger_2018_01_121_p2_A04_1c_S121


title: um_berninger_2018_01_120_p6_H03_1c_S120


title: um_berninger_2018_01_120_p2_H03_1c_S120


title: um_berninger_2018_01_119_p2_G03_1c_S119


title: um_berninger_2018_01_118_p2_F03_1c_S118


title: um_berninger_2018_01_118_p6_F03_1c_S118


title: um_berninger_2018_01_117_p6_E03_1c_S117


title: um_berninger_2018_01_117_p2_E03_1c_S117


title: um_berninger_2018_01_129_p2_A05_1c_S129


title: um_berninger_2018_01_115_p6_C03_1c_S115


title: um_berninger_2018_01_116_p6_D03_1c_S116


title: um_berninger_2018_01_116_p2_D03_1c_S116


title: um_berninger_2018_01_114_p6_B03_1c_S114


title: um_berninger_2018_01_113_p6_A03_1c_S113


title: um_berninger_2018_01_115_p2_C03_1c_S115


title: um_berninger_2018_01_126_p2_F04_1c_S126


title: um_berninger_2018_01_130_p2_B05_1c_S130


title: um_berninger_2018_01_112_p6_H02_1c_S112


title: um_berninger_2018_01_112_p2_H02_1c_S112


title: um_berninger_2018_01_113_p2_A03_1c_S113


title: um_berninger_2018_01_124_p6_D04_1c_S124


title: um_berninger_2018_01_114_p2_B03_1c_S114


title: um_berninger_2018_01_111_p2_G02_1c_S111


title: um_berninger_2018_01_110_p2_F02_1c_S110


title: um_berninger_2018_01_110_p6_F02_1c_S110


title: um_berninger_2018_01_109_p6_E02_1c_S109


title: um_berninger_2018_01_109_p2_E02_1c_S109


title: um_berninger_2018_01_108_p2_D02_1c_S108


title: um_berninger_2018_01_108_p6_D02_1c_S108


title: um_berninger_2018_01_107_p6_C02_1c_S107


title: um_berninger_2018_01_119_p6_G03_1c_S119


title: um_berninger_2018_01_107_p2_C02_1c_S107


title: um_berninger_2018_01_106_p6_B02_1c_S106


title: um_berninger_2018_01_106_p2_B02_1c_S106


title: um_berninger_2018_01_104_p2_H01_1c_S104


title: um_berninger_2018_01_104_p6_H01_1c_S104


title: um_berninger_2018_01_105_p2_A02_1c_S105


title: um_berninger_2018_01_102_p2_F01_1c_S102


title: um_berninger_2018_01_103_p2_G01_1c_S103


title: um_berninger_2018_01_102_p6_F01_1c_S102


title: um_berninger_2018_01_105_p6_A02_1c_S105


title: um_berninger_2018_01_111_p6_G02_1c_S111


title: um_berninger_2018_01_100_p2_D01_1c_S100


title: um_berninger_2018_01_100_p6_D01_1c_S100


title: um_berninger_2018_01_101_p2_E01_1c_S101


title: um_berninger_2018_01_099_p2_C01_1c_S99


title: um_berninger_2018_01_098_p6_B01_1c_S98


title: um_berninger_2018_01_096_p5_H12_1c_S96


title: um_berninger_2018_01_101_p6_E01_1c_S101


title: um_berninger_2018_01_098_p2_B01_1c_S98


title: um_berninger_2018_01_097_p6_A01_1c_S97


title: um_berninger_2018_01_095_p1_G12_1c_S95


title: um_berninger_2018_01_096_p1_H12_1c_S96


title: um_berninger_2018_01_094_p1_F12_1c_S94


title: um_berninger_2018_01_095_p5_G12_1c_S95


title: um_berninger_2018_01_093_p1_E12_1c_S93


title: um_berninger_2018_01_094_p5_F12_1c_S94


title: um_berninger_2018_01_092_p5_D12_1c_S92


title: um_berninger_2018_01_093_p5_E12_1c_S93


title: um_berninger_2018_01_103_p6_G01_1c_S103


title: um_berninger_2018_01_090_p1_B12_1c_S90


title: um_berninger_2018_01_090_p5_B12_1c_S90


title: um_berninger_2018_01_091_p1_C12_1c_S91


title: um_berninger_2018_01_089_p5_A12_1c_S89


title: um_berninger_2018_01_089_p1_A12_1c_S89


title: um_berninger_2018_01_088_p1_H11_1c_S88


title: um_berninger_2018_01_099_p6_C01_1c_S99


title: um_berninger_2018_01_097_p2_A01_1c_S97


title: um_berninger_2018_01_088_p5_H11_1c_S88


title: um_berninger_2018_01_086_p5_F11_1c_S86


title: um_berninger_2018_01_086_p1_F11_1c_S86


title: um_berninger_2018_01_085_p5_E11_1c_S85


title: um_berninger_2018_01_087_p1_G11_1c_S87


title: um_berninger_2018_01_087_p5_G11_1c_S87


title: um_berninger_2018_01_083_p1_C11_1c_S83


title: um_berninger_2018_01_084_p1_D11_1c_S84


title: um_berninger_2018_01_084_p5_D11_1c_S84


title: um_berninger_2018_01_082_p5_B11_1c_S82


title: um_berninger_2018_01_092_p1_D12_1c_S92


title: um_berninger_2018_01_081_p1_A11_1c_S81


title: um_berninger_2018_01_082_p1_B11_1c_S82


title: um_berninger_2018_01_083_p5_C11_1c_S83


title: um_berninger_2018_01_080_p5_H10_1c_S80


title: um_berninger_2018_01_079_p5_G10_1c_S79


title: um_berninger_2018_01_091_p5_C12_1c_S91


title: um_berninger_2018_01_078_p5_F10_1c_S78


title: um_berninger_2018_01_080_p1_H10_1c_S80


title: um_berninger_2018_01_079_p1_G10_1c_S79


title: um_berninger_2018_01_081_p5_A11_1c_S81


title: um_berninger_2018_01_076_p1_D10_1c_S76


title: um_berninger_2018_01_076_p5_D10_1c_S76


title: um_berninger_2018_01_077_p5_E10_1c_S77


title: um_berninger_2018_01_085_p1_E11_1c_S85


title: um_berninger_2018_01_075_p1_C10_1c_S75


title: um_berninger_2018_01_077_p1_E10_1c_S77


title: um_berninger_2018_01_073_p5_A10_1c_S73


title: um_berninger_2018_01_072_p5_H09_1c_S72


title: um_berninger_2018_01_073_p1_A10_1c_S73


title: um_berninger_2018_01_074_p1_B10_1c_S74


title: um_berninger_2018_01_071_p5_G09_1c_S71


title: um_berninger_2018_01_074_p5_B10_1c_S74


title: um_berninger_2018_01_072_p1_H09_1c_S72


title: um_berninger_2018_01_075_p5_C10_1c_S75


title: um_berninger_2018_01_069_p5_E09_1c_S69


title: um_berninger_2018_01_069_p1_E09_1c_S69


title: um_berninger_2018_01_067_p5_C09_1c_S67


title: um_berninger_2018_01_068_p5_D09_1c_S68


title: um_berninger_2018_01_067_p1_C09_1c_S67


title: um_berninger_2018_01_066_p5_B09_1c_S66


title: um_berninger_2018_01_065_p1_A09_1c_S65


title: um_berninger_2018_01_078_p1_F10_1c_S78


title: um_berninger_2018_01_065_p5_A09_1c_S65


title: um_berninger_2018_01_066_p1_B09_1c_S66


title: um_berninger_2018_01_063_p1_G08_1c_S63


title: um_berninger_2018_01_063_p5_G08_1c_S63


title: um_berninger_2018_01_064_p1_H08_1c_S64


title: um_berninger_2018_01_064_p5_H08_1c_S64


title: um_berninger_2018_01_071_p1_G09_1c_S71


title: um_berninger_2018_01_070_p1_F09_1c_S70


title: um_berninger_2018_01_060_p5_D08_1c_S60


title: um_berninger_2018_01_062_p1_F08_0c_S62

description:
Yap-d07
sample for QC diagnostics


title: um_berninger_2018_01_070_p5_F09_1c_S70


title: um_berninger_2018_01_061_p1_E08_10c_S61

description:
Yap-d07
sample for QC diagnostics


title: um_berninger_2018_01_060_p1_D08_1c_S60


title: um_berninger_2018_01_061_p5_E08_10c_S61

description:
Yap-d07
sample for QC diagnostics


title: um_berninger_2018_01_059_p1_C08_1c_S59


title: um_berninger_2018_01_056_p1_H07_1c_S56


title: um_berninger_2018_01_058_p5_B08_1c_S58


title: um_berninger_2018_01_058_p1_B08_1c_S58


title: um_berninger_2018_01_055_p1_G07_1c_S55


title: um_berninger_2018_01_068_p1_D09_1c_S68


title: um_berninger_2018_01_056_p5_H07_1c_S56


title: um_berninger_2018_01_054_p1_F07_1c_S54


title: um_berninger_2018_01_057_p1_A08_1c_S57


title: um_berninger_2018_01_054_p5_F07_1c_S54


title: um_berninger_2018_01_055_p5_G07_1c_S55


title: um_berninger_2018_01_062_p5_F08_0c_S62

description:
Yap-d07
sample for QC diagnostics


title: um_berninger_2018_01_057_p5_A08_1c_S57


title: um_berninger_2018_01_052_p5_D07_1c_S52


title: um_berninger_2018_01_053_p1_E07_1c_S53


title: um_berninger_2018_01_053_p5_E07_1c_S53


title: um_berninger_2018_01_051_p1_C07_1c_S51


title: um_berninger_2018_01_059_p5_C08_1c_S59


title: um_berninger_2018_01_050_p5_B07_1c_S50


title: um_berninger_2018_01_052_p1_D07_1c_S52


title: um_berninger_2018_01_046_p5_F06_1c_S46


title: um_berninger_2018_01_046_p1_F06_1c_S46


title: um_berninger_2018_01_048_p1_H06_1c_S48


title: um_berninger_2018_01_047_p1_G06_1c_S47


title: um_berninger_2018_01_050_p1_B07_1c_S50


title: um_berninger_2018_01_049_p1_A07_1c_S49


title: um_berninger_2018_01_051_p5_C07_1c_S51


title: um_berninger_2018_01_048_p5_H06_1c_S48


title: um_berninger_2018_01_049_p5_A07_1c_S49


title: um_berninger_2018_01_044_p5_D06_1c_S44


title: um_berninger_2018_01_047_p5_G06_1c_S47


title: um_berninger_2018_01_043_p5_C06_1c_S43


title: um_berninger_2018_01_042_p1_B06_1c_S42


title: um_berninger_2018_01_043_p1_C06_1c_S43


title: um_berninger_2018_01_041_p1_A06_1c_S41


title: um_berninger_2018_01_040_p5_H05_1c_S40


title: um_berninger_2018_01_038_p1_F05_0c_S38

description:
Control-d07
sample for QC diagnostics


title: um_berninger_2018_01_041_p5_A06_1c_S41


title: um_berninger_2018_01_045_p5_E06_1c_S45


title: um_berninger_2018_01_040_p1_H05_1c_S40


title: um_berninger_2018_01_039_p5_G05_1c_S39


title: um_berninger_2018_01_039_p1_G05_1c_S39


title: um_berninger_2018_01_045_p1_E06_1c_S45


title: um_berninger_2018_01_044_p1_D06_1c_S44


title: um_berninger_2018_01_036_p5_D05_1c_S36


title: um_berninger_2018_01_038_p5_F05_0c_S38

description:
Control-d07
sample for QC diagnostics


title: um_berninger_2018_01_037_p1_E05_10c_S37

description:
Control-d07
sample for QC diagnostics


title: um_berninger_2018_01_034_p5_B05_1c_S34


title: um_berninger_2018_01_037_p5_E05_10c_S37

description:
Control-d07
sample for QC diagnostics


title: um_berninger_2018_01_034_p1_B05_1c_S34


title: um_berninger_2018_01_033_p5_A05_1c_S33


title: um_berninger_2018_01_042_p5_B06_1c_S42


title: um_berninger_2018_01_032_p5_H04_1c_S32


title: um_berninger_2018_01_035_p1_C05_1c_S35


title: um_berninger_2018_01_032_p1_H04_1c_S32


title: um_berninger_2018_01_033_p1_A05_1c_S33


title: um_berninger_2018_01_036_p1_D05_1c_S36


title: um_berninger_2018_01_031_p5_G04_1c_S31


title: um_berninger_2018_01_030_p5_F04_1c_S30


title: um_berninger_2018_01_031_p1_G04_1c_S31


title: um_berninger_2018_01_024_p1_H03_1c_S24


title: um_berninger_2018_01_026_p5_B04_1c_S26


title: um_berninger_2018_01_025_p1_A04_1c_S25


title: um_berninger_2018_01_029_p1_E04_1c_S29


title: um_berninger_2018_01_029_p5_E04_1c_S29


title: um_berninger_2018_01_028_p5_D04_1c_S28


title: um_berninger_2018_01_021_p5_E03_1c_S21


title: um_berninger_2018_01_020_p1_D03_1c_S20


title: um_berninger_2018_01_028_p1_D04_1c_S28


title: um_berninger_2018_01_026_p1_B04_1c_S26


title: um_berninger_2018_01_025_p5_A04_1c_S25


title: um_berninger_2018_01_027_p5_C04_1c_S27


title: um_berninger_2018_01_018_p5_B03_1c_S18


title: um_berninger_2018_01_024_p5_H03_1c_S24


title: um_berninger_2018_01_019_p1_C03_1c_S19


title: um_berninger_2018_01_017_p1_A03_1c_S17


title: um_berninger_2018_01_035_p5_C05_1c_S35


title: um_berninger_2018_01_022_p5_F03_1c_S22


title: um_berninger_2018_01_023_p5_G03_1c_S23


title: um_berninger_2018_01_023_p1_G03_1c_S23


title: um_berninger_2018_01_016_p1_H02_1c_S16


title: um_berninger_2018_01_022_p1_F03_1c_S22


title: um_berninger_2018_01_021_p1_E03_1c_S21


title: um_berninger_2018_01_017_p5_A03_1c_S17


title: um_berninger_2018_01_015_p5_G02_1c_S15


title: um_berninger_2018_01_018_p1_B03_1c_S18


title: um_berninger_2018_01_020_p5_D03_1c_S20


title: um_berninger_2018_01_030_p1_F04_1c_S30


title: um_berninger_2018_01_014_p1_F02_1c_S14


title: um_berninger_2018_01_027_p1_C04_1c_S27


title: um_berninger_2018_01_016_p5_H02_1c_S16


title: um_berninger_2018_01_011_p1_C02_1c_S11


title: um_berninger_2018_01_011_p5_C02_1c_S11


title: um_berninger_2018_01_015_p1_G02_1c_S15


title: um_berninger_2018_01_008_p5_H01_1c_S8


title: um_berninger_2018_01_008_p1_H01_1c_S8


title: um_berninger_2018_01_014_p5_F02_1c_S14


title: um_berninger_2018_01_013_p5_E02_1c_S13


title: um_berninger_2018_01_013_p1_E02_1c_S13


title: um_berninger_2018_01_019_p5_C03_1c_S19


title: um_berninger_2018_01_006_p5_F01_1c_S6


title: um_berninger_2018_01_005_p5_E01_1c_S5


title: um_berninger_2018_01_012_p5_D02_1c_S12


title: um_berninger_2018_01_005_p1_E01_1c_S5


title: um_berninger_2018_01_012_p1_D02_1c_S12


title: um_berninger_2018_01_003_p1_C01_1c_S3


title: um_berninger_2018_01_004_p1_D01_1c_S4


title: um_berninger_2018_01_002_p5_B01_1c_S2


title: um_berninger_2018_01_002_p1_B01_1c_S2


title: um_berninger_2018_01_003_p5_C01_1c_S3


title: um_berninger_2018_01_009_p5_A02_1c_S9


title: um_berninger_2018_01_009_p1_A02_1c_S9


title: um_berninger_2018_01_007_p5_G01_1c_S7


title: um_berninger_2018_01_007_p1_G01_1c_S7


title: um_berninger_2018_01_010_p5_B02_1c_S10


title: um_berninger_2018_01_006_p1_F01_1c_S6


title: um_berninger_2019_01_383_p8_G12_1c_S383

description:
Yap-d03
expression of Yap1 in adult neural stem cells for 3 days


title: um_berninger_2018_01_010_p1_B02_1c_S10


title: um_berninger_2019_01_384_p8_H12_1c_S384


title: um_berninger_2018_01_004_p5_D01_1c_S4


title: um_berninger_2018_01_001_p1_A01_1c_S1


title: um_berninger_2019_01_382_p8_F12_1c_S382


title: um_berninger_2018_01_001_p5_A01_1c_S1


title: um_berninger_2019_01_383_p10_G12_1c_S383


title: um_berninger_2019_01_381_p8_E12_1c_S381


title: um_berninger_2019_01_382_p10_F12_1c_S382


title: um_berninger_2019_01_384_p10_H12_1c_S384


title: um_berninger_2019_01_377_p8_A12_1c_S377


title: um_berninger_2019_01_379_p10_C12_1c_S379


title: um_berninger_2019_01_380_p8_D12_1c_S380


title: um_berninger_2019_01_378_p8_B12_1c_S378


title: um_berninger_2019_01_378_p10_B12_1c_S378


title: um_berninger_2019_01_377_p10_A12_1c_S377


title: um_berninger_2019_01_375_p8_G11_1c_S375

description:
Control-d03
expression of control virus in adult neural stem cells for 3 days


title: um_berninger_2019_01_379_p8_C12_1c_S379


title: um_berninger_2019_01_380_p10_D12_1c_S380


title: um_berninger_2019_01_374_p8_F11_1c_S374


title: um_berninger_2019_01_373_p8_E11_1c_S373


title: um_berninger_2019_01_374_p10_F11_1c_S374


title: um_berninger_2019_01_373_p10_E11_1c_S373


title: um_berninger_2019_01_372_p8_D11_1c_S372


title: um_berninger_2019_01_376_p10_H11_1c_S376


title: um_berninger_2019_01_375_p10_G11_1c_S375


title: um_berninger_2019_01_372_p10_D11_1c_S372


title: um_berninger_2019_01_371_p8_C11_1c_S371


title: um_berninger_2019_01_376_p8_H11_1c_S376


title: um_berninger_2019_01_370_p8_B11_1c_S370


title: um_berninger_2019_01_370_p10_B11_1c_S370


title: um_berninger_2019_01_381_p10_E12_1c_S381


title: um_berninger_2019_01_371_p10_C11_1c_S371


title: um_berninger_2019_01_369_p8_A11_1c_S369


title: um_berninger_2019_01_368_p8_H10_1c_S368


title: um_berninger_2019_01_369_p10_A11_1c_S369


title: um_berninger_2019_01_367_p8_G10_1c_S367


title: um_berninger_2019_01_367_p10_G10_1c_S367


title: um_berninger_2019_01_366_p8_F10_1c_S366


title: um_berninger_2019_01_366_p10_F10_1c_S366


title: um_berninger_2019_01_365_p8_E10_1c_S365


title: um_berninger_2019_01_365_p10_E10_1c_S365


title: um_berninger_2019_01_364_p10_D10_1c_S364


title: um_berninger_2019_01_363_p10_C10_1c_S363


title: um_berninger_2019_01_362_p8_B10_1c_S362


title: um_berninger_2019_01_363_p8_C10_1c_S363


title: um_berninger_2019_01_358_p10_F09_1c_S358


title: um_berninger_2019_01_360_p10_H09_1c_S360


title: um_berninger_2019_01_358_p8_F09_1c_S358


title: um_berninger_2019_01_361_p10_A10_1c_S361


title: um_berninger_2019_01_359_p8_G09_1c_S359


title: um_berninger_2019_01_360_p8_H09_1c_S360


title: um_berninger_2019_01_361_p8_A10_1c_S361


title: um_berninger_2019_01_362_p10_B10_1c_S362


title: um_berninger_2019_01_368_p10_H10_1c_S368


title: um_berninger_2019_01_357_p8_E09_1c_S357


title: um_berninger_2019_01_357_p10_E09_1c_S357


title: um_berninger_2019_01_356_p10_D09_1c_S356


title: um_berninger_2019_01_356_p8_D09_1c_S356


title: um_berninger_2019_01_355_p10_C09_1c_S355


title: um_berninger_2019_01_354_p10_B09_1c_S354


title: um_berninger_2019_01_353_p8_A09_1c_S353


title: um_berninger_2019_01_353_p10_A09_1c_S353


title: um_berninger_2019_01_354_p8_B09_1c_S354


title: um_berninger_2019_01_352_p8_H08_1c_S352


title: um_berninger_2019_01_364_p8_D10_1c_S364


title: um_berninger_2019_01_352_p10_H08_1c_S352


title: um_berninger_2019_01_351_p8_G08_1c_S351


title: um_berninger_2019_01_350_p8_F08_0c_S350

description:
Yap-d03
sample for QC diagnostics


title: um_berninger_2019_01_351_p10_G08_1c_S351


title: um_berninger_2019_01_349_p10_E08_10c_S349

description:
Yap-d03
sample for QC diagnostics


title: um_berninger_2019_01_349_p8_E08_10c_S349

description:
Yap-d03
sample for QC diagnostics


title: um_berninger_2019_01_359_p10_G09_1c_S359


title: um_berninger_2019_01_350_p10_F08_0c_S350

description:
Yap-d03
sample for QC diagnostics


title: um_berninger_2019_01_348_p8_D08_1c_S348


title: um_berninger_2019_01_355_p8_C09_1c_S355


title: um_berninger_2019_01_348_p10_D08_1c_S348


title: um_berninger_2019_01_344_p8_H07_1c_S344


title: um_berninger_2019_01_347_p10_C08_1c_S347


title: um_berninger_2019_01_345_p8_A08_1c_S345


title: um_berninger_2019_01_346_p8_B08_1c_S346


title: um_berninger_2019_01_344_p10_H07_1c_S344


title: um_berninger_2019_01_347_p8_C08_1c_S347


title: um_berninger_2019_01_343_p10_G07_1c_S343


title: um_berninger_2019_01_346_p10_B08_1c_S346


title: um_berninger_2019_01_340_p8_D07_1c_S340


title: um_berninger_2019_01_341_p8_E07_1c_S341


title: um_berninger_2019_01_340_p10_D07_1c_S340


title: um_berninger_2019_01_341_p10_E07_1c_S341


title: um_berninger_2019_01_339_p8_C07_1c_S339


title: um_berninger_2019_01_342_p10_F07_1c_S342


title: um_berninger_2019_01_339_p10_C07_1c_S339


title: um_berninger_2019_01_338_p10_B07_1c_S338


title: um_berninger_2019_01_338_p8_B07_1c_S338


title: um_berninger_2019_01_337_p8_A07_1c_S337


title: um_berninger_2019_01_336_p10_H06_1c_S336


title: um_berninger_2019_01_345_p10_A08_1c_S345


title: um_berninger_2019_01_334_p8_F06_1c_S334


title: um_berninger_2019_01_343_p8_G07_1c_S343


title: um_berninger_2019_01_335_p10_G06_1c_S335


title: um_berninger_2019_01_335_p8_G06_1c_S335


title: um_berninger_2019_01_334_p10_F06_1c_S334


title: um_berninger_2019_01_332_p10_D06_1c_S332


title: um_berninger_2019_01_333_p10_E06_1c_S333


title: um_berninger_2019_01_330_p8_B06_1c_S330


title: um_berninger_2019_01_331_p10_C06_1c_S331


title: um_berninger_2019_01_342_p8_F07_1c_S342


title: um_berninger_2019_01_332_p8_D06_1c_S332


title: um_berninger_2019_01_330_p10_B06_1c_S330


title: um_berninger_2019_01_331_p8_C06_1c_S331


title: um_berninger_2019_01_333_p8_E06_1c_S333


title: um_berninger_2019_01_329_p8_A06_1c_S329


title: um_berninger_2019_01_328_p10_H05_1c_S328


title: um_berninger_2019_01_325_p8_E05_10c_S325

description:
Control-d03
sample for QC diagnostics


title: um_berninger_2019_01_325_p10_E05_10c_S325

description:
Control-d03
sample for QC diagnostics


title: um_berninger_2019_01_337_p10_A07_1c_S337


title: um_berninger_2019_01_326_p10_F05_0c_S326

description:
Control-d03
sample for QC diagnostics


title: um_berninger_2019_01_326_p8_F05_0c_S326

description:
Control-d03
sample for QC diagnostics


title: um_berninger_2019_01_327_p10_G05_1c_S327


title: um_berninger_2019_01_324_p10_D05_1c_S324


title: um_berninger_2019_01_324_p8_D05_1c_S324


title: um_berninger_2019_01_323_p8_C05_1c_S323


title: um_berninger_2019_01_336_p8_H06_1c_S336


title: um_berninger_2019_01_321_p8_A05_1c_S321


title: um_berninger_2019_01_320_p8_H04_1c_S320


title: um_berninger_2019_01_322_p8_B05_1c_S322


title: um_berninger_2019_01_321_p10_A05_1c_S321


title: um_berninger_2019_01_322_p10_B05_1c_S322


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title: um_berninger_2019_01_323_p10_C05_1c_S323


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title: um_berninger_2019_01_318_p10_F04_1c_S318


title: um_berninger_2019_01_319_p10_G04_1c_S319


title: um_berninger_2019_01_319_p8_G04_1c_S319


title: um_berninger_2019_01_317_p10_E04_1c_S317


title: um_berninger_2019_01_328_p8_H05_1c_S328


title: um_berninger_2019_01_315_p8_C04_1c_S315


title: um_berninger_2019_01_315_p10_C04_1c_S315


title: um_berninger_2019_01_318_p8_F04_1c_S318


title: um_berninger_2019_01_314_p8_B04_1c_S314


title: um_berninger_2019_01_316_p10_D04_1c_S316


title: um_berninger_2019_01_313_p8_A04_1c_S313


title: um_berninger_2019_01_316_p8_D04_1c_S316


title: um_berninger_2019_01_312_p10_H03_1c_S312


title: um_berninger_2019_01_313_p10_A04_1c_S313


title: um_berninger_2019_01_311_p8_G03_1c_S311


title: um_berninger_2019_01_311_p10_G03_1c_S311


title: um_berninger_2019_01_327_p8_G05_1c_S327


title: um_berninger_2019_01_310_p8_F03_1c_S310


title: um_berninger_2019_01_310_p10_F03_1c_S310


title: um_berninger_2019_01_312_p8_H03_1c_S312


title: um_berninger_2019_01_309_p8_E03_1c_S309


title: um_berninger_2019_01_320_p10_H04_1c_S320


title: um_berninger_2019_01_307_p8_C03_1c_S307


title: um_berninger_2019_01_309_p10_E03_1c_S309


title: um_berninger_2019_01_308_p10_D03_1c_S308


title: um_berninger_2019_01_305_p10_A03_1c_S305


title: um_berninger_2019_01_304_p10_H02_1c_S304


title: um_berninger_2019_01_306_p8_B03_1c_S306


title: um_berninger_2019_01_303_p8_G02_1c_S303


title: um_berninger_2019_01_305_p8_A03_1c_S305


title: um_berninger_2019_01_307_p10_C03_1c_S307


title: um_berninger_2019_01_302_p10_F02_1c_S302


title: um_berninger_2019_01_304_p8_H02_1c_S304


title: um_berninger_2019_01_306_p10_B03_1c_S306


title: um_berninger_2019_01_302_p8_F02_1c_S302


title: um_berninger_2019_01_300_p8_D02_1c_S300


title: um_berninger_2019_01_298_p8_B02_1c_S298


title: um_berninger_2019_01_298_p10_B02_1c_S298


title: um_berninger_2019_01_308_p8_D03_1c_S308


title: um_berninger_2019_01_299_p8_C02_1c_S299


title: um_berninger_2019_01_301_p10_E02_1c_S301


title: um_berninger_2019_01_297_p10_A02_1c_S297


title: um_berninger_2019_01_299_p10_C02_1c_S299


title: um_berninger_2019_01_297_p8_A02_1c_S297


title: um_berninger_2019_01_295_p10_G01_1c_S295


title: um_berninger_2019_01_295_p8_G01_1c_S295


title: um_berninger_2019_01_294_p8_F01_1c_S294


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title: um_berninger_2019_01_293_p8_E01_1c_S293


title: um_berninger_2019_01_301_p8_E02_1c_S301


title: um_berninger_2019_01_303_p10_G02_1c_S303


title: um_berninger_2019_01_292_p10_D01_1c_S292


title: um_berninger_2019_01_293_p10_E01_1c_S293


title: um_berninger_2019_01_292_p8_D01_1c_S292


title: um_berninger_2019_01_291_p10_C01_1c_S291


title: um_berninger_2019_01_291_p8_C01_1c_S291


title: um_berninger_2019_01_300_p10_D02_1c_S300


title: um_berninger_2019_01_290_p10_B01_1c_S290


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title: um_berninger_2019_01_290_p8_B01_1c_S290


title: um_berninger_2019_01_288_p7_H12_1c_S288


title: um_berninger_2019_01_288_p9_H12_1c_S288


title: um_berninger_2019_01_289_p10_A01_1c_S289


title: um_berninger_2019_01_286_p9_F12_1c_S286


title: um_berninger_2019_01_287_p9_G12_1c_S287


title: um_berninger_2019_01_287_p7_G12_1c_S287


title: um_berninger_2019_01_294_p10_F01_1c_S294


title: um_berninger_2019_01_285_p9_E12_1c_S285


title: um_berninger_2019_01_283_p7_C12_1c_S283


title: um_berninger_2019_01_284_p7_D12_1c_S284


title: um_berninger_2019_01_282_p7_B12_1c_S282


title: um_berninger_2019_01_283_p9_C12_1c_S283


title: um_berninger_2019_01_285_p7_E12_1c_S285


title: um_berninger_2019_01_282_p9_B12_1c_S282


title: um_berninger_2019_01_289_p8_A01_1c_S289


title: um_berninger_2019_01_281_p9_A12_1c_S281


title: um_berninger_2019_01_279_p9_G11_1c_S279


title: um_berninger_2019_01_278_p9_F11_1c_S278


title: um_berninger_2019_01_280_p9_H11_1c_S280


title: um_berninger_2019_01_281_p7_A12_1c_S281


title: um_berninger_2019_01_280_p7_H11_1c_S280


title: um_berninger_2019_01_276_p7_D11_1c_S276


title: um_berninger_2019_01_277_p9_E11_1c_S277


title: um_berninger_2019_01_276_p9_D11_1c_S276


title: um_berninger_2019_01_286_p7_F12_1c_S286


title: um_berninger_2019_01_277_p7_E11_1c_S277


title: um_berninger_2019_01_274_p9_B11_1c_S274


title: um_berninger_2019_01_278_p7_F11_1c_S278


title: um_berninger_2019_01_272_p9_H10_1c_S272


title: um_berninger_2019_01_271_p9_G10_1c_S271


title: um_berninger_2019_01_270_p9_F10_1c_S270


title: um_berninger_2019_01_270_p7_F10_1c_S270


title: um_berninger_2019_01_284_p9_D12_1c_S284


title: um_berninger_2019_01_275_p9_C11_1c_S275


title: um_berninger_2019_01_275_p7_C11_1c_S275


title: um_berninger_2019_01_274_p7_B11_1c_S274


title: um_berninger_2019_01_273_p7_A11_1c_S273


title: um_berninger_2019_01_269_p7_E10_1c_S269


title: um_berninger_2019_01_271_p7_G10_1c_S271


title: um_berninger_2019_01_269_p9_E10_1c_S269


title: um_berninger_2019_01_267_p9_C10_1c_S267


title: um_berninger_2019_01_267_p7_C10_1c_S267


title: um_berninger_2019_01_272_p7_H10_1c_S272


title: um_berninger_2019_01_266_p7_B10_1c_S266


title: um_berninger_2019_01_265_p9_A10_1c_S265


title: um_berninger_2019_01_264_p9_H09_1c_S264


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title: um_berninger_2019_01_262_p7_F09_1c_S262


title: um_berninger_2019_01_279_p7_G11_1c_S279


title: um_berninger_2019_01_268_p9_D10_1c_S268


title: um_berninger_2019_01_261_p9_E09_1c_S261


title: um_berninger_2019_01_260_p7_D09_1c_S260


title: um_berninger_2019_01_268_p7_D10_1c_S268


title: um_berninger_2019_01_259_p9_C09_1c_S259


title: um_berninger_2019_01_258_p9_B09_1c_S258


title: um_berninger_2019_01_256_p9_H08_1c_S256


title: um_berninger_2019_01_266_p9_B10_1c_S266


title: um_berninger_2019_01_265_p7_A10_1c_S265


title: um_berninger_2019_01_254_p7_F08_0c_S254

description:
Yap-d03
sample for QC diagnostics


title: um_berninger_2019_01_264_p7_H09_1c_S264


title: um_berninger_2019_01_255_p7_G08_1c_S255


title: um_berninger_2019_01_273_p9_A11_1c_S273


title: um_berninger_2019_01_254_p9_F08_0c_S254

description:
Yap-d03
sample for QC diagnostics


title: um_berninger_2019_01_263_p7_G09_1c_S263


title: um_berninger_2019_01_263_p9_G09_1c_S263


title: um_berninger_2019_01_261_p7_E09_1c_S261


title: um_berninger_2019_01_253_p9_E08_10c_S253

description:
Yap-d03
sample for QC diagnostics


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title: um_berninger_2019_01_260_p9_D09_1c_S260


title: um_berninger_2019_01_259_p7_C09_1c_S259


title: um_berninger_2019_01_258_p7_B09_1c_S258


title: um_berninger_2019_01_257_p9_A09_1c_S257


title: um_berninger_2019_01_257_p7_A09_1c_S257


title: um_berninger_2019_01_255_p9_G08_1c_S255


title: um_berninger_2019_01_253_p7_E08_10c_S253

description:
Yap-d03
sample for QC diagnostics


title: um_berninger_2019_01_249_p7_A08_1c_S249


title: um_berninger_2019_01_252_p7_D08_1c_S252


title: um_berninger_2019_01_252_p9_D08_1c_S252


title: um_berninger_2019_01_250_p7_B08_1c_S250


title: um_berninger_2019_01_250_p9_B08_1c_S250


title: um_berninger_2019_01_251_p7_C08_1c_S251


title: um_berninger_2019_01_248_p9_H07_1c_S248


title: um_berninger_2019_01_249_p9_A08_1c_S249


title: um_berninger_2019_01_244_p9_D07_1c_S244


title: um_berninger_2019_01_246_p7_F07_0c_S246

description:
Control-d03
sample for QC diagnostics


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title: um_berninger_2019_01_242_p9_B07_1c_S242


title: um_berninger_2019_01_246_p9_F07_0c_S246

description:
Control-d03
sample for QC diagnostics


title: um_berninger_2019_01_243_p7_C07_1c_S243


title: um_berninger_2019_01_240_p9_H06_1c_S240


title: um_berninger_2019_01_245_p9_E07_10c_S245

description:
Control-d03
sample for QC diagnostics


title: um_berninger_2019_01_256_p7_H08_1c_S256


title: um_berninger_2019_01_248_p7_H07_1c_S248


title: um_berninger_2019_01_247_p9_G07_1c_S247


title: um_berninger_2019_01_239_p9_G06_1c_S239


title: um_berninger_2019_01_245_p7_E07_10c_S245

description:
Control-d03
sample for QC diagnostics


title: um_berninger_2019_01_244_p7_D07_1c_S244


title: um_berninger_2019_01_243_p9_C07_1c_S243


title: um_berninger_2019_01_242_p7_B07_1c_S242


title: um_berninger_2019_01_314_p10_B04_1c_S314


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title: um_berninger_2019_01_239_p7_G06_1c_S239


title: um_berninger_2019_01_240_p7_H06_1c_S240


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title: um_berninger_2019_01_228_p7_D05_1c_S228


title: um_berninger_2019_01_238_p9_F06_1c_S238


title: um_berninger_2019_01_229_p9_E05_10c_S229

description:
Control-d03
sample for QC diagnostics


title: um_berninger_2019_01_230_p7_F05_0c_S230

description:
Control-d03
sample for QC diagnostics


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title: um_berninger_2019_01_232_p7_H05_1c_S232


title: um_berninger_2019_01_232_p9_H05_1c_S232


title: um_berninger_2019_01_238_p7_F06_1c_S238


title: um_berninger_2019_01_230_p9_F05_0c_S230

description:
Control-d03
sample for QC diagnostics


title: um_berninger_2019_01_235_p9_C06_1c_S235


title: um_berninger_2019_01_229_p7_E05_10c_S229

description:
Control-d03
sample for QC diagnostics


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title: um_berninger_2019_01_236_p9_D06_1c_S236


title: um_berninger_2019_01_231_p9_G05_1c_S231


title: um_berninger_2019_01_233_p9_A06_1c_S233


title: um_berninger_2019_01_237_p9_E06_1c_S237


title: um_berninger_2019_01_234_p7_B06_1c_S234


title: um_berninger_2019_01_236_p7_D06_1c_S236


title: um_berninger_2019_01_231_p7_G05_1c_S231


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title: um_berninger_2019_01_235_p7_C06_1c_S235


title: um_berninger_2019_01_226_p9_B05_1c_S226


title: um_berninger_2019_01_233_p7_A06_1c_S233


title: um_berninger_2019_01_226_p7_B05_1c_S226


title: um_berninger_2019_01_225_p7_A05_1c_S225


title: um_berninger_2019_01_225_p9_A05_1c_S225


title: um_berninger_2019_01_223_p9_G04_1c_S223


title: um_berninger_2019_01_223_p7_G04_1c_S223


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title: um_berninger_2019_01_222_p9_F04_1c_S222


title: um_berninger_2019_01_219_p7_C04_1c_S219


title: um_berninger_2019_01_220_p7_D04_1c_S220


title: um_berninger_2019_01_216_p9_H03_1c_S216


title: um_berninger_2019_01_221_p9_E04_1c_S221


title: um_berninger_2019_01_224_p9_H04_1c_S224


title: um_berninger_2019_01_224_p7_H04_1c_S224


title: um_berninger_2019_01_213_p9_E03_1c_S213


title: um_berninger_2019_01_215_p9_G03_1c_S215


title: um_berninger_2019_01_212_p9_D03_1c_S212


title: um_berninger_2019_01_213_p7_E03_1c_S213


title: um_berninger_2019_01_212_p7_D03_1c_S212


title: um_berninger_2019_01_222_p7_F04_1c_S222


title: um_berninger_2019_01_221_p7_E04_1c_S221


title: um_berninger_2019_01_210_p7_B03_1c_S210


title: um_berninger_2019_01_220_p9_D04_1c_S220


title: um_berninger_2019_01_219_p9_C04_1c_S219


title: um_berninger_2019_01_208_p9_H02_1c_S208


title: um_berninger_2019_01_208_p7_H02_1c_S208


title: um_berninger_2019_01_207_p7_G02_1c_S207


title: um_berninger_2019_01_206_p7_F02_1c_S206


title: um_berninger_2019_01_218_p9_B04_1c_S218


title: um_berninger_2019_01_210_p9_B03_1c_S210


title: um_berninger_2019_01_204_p7_D02_1c_S204


title: um_berninger_2019_01_217_p9_A04_1c_S217


title: um_berninger_2019_01_217_p7_A04_1c_S217


title: um_berninger_2019_01_203_p9_C02_1c_S203


title: um_berninger_2019_01_202_p7_B02_1c_S202


title: um_berninger_2019_01_216_p7_H03_1c_S216


title: um_berninger_2019_01_201_p9_A02_1c_S201


title: um_berninger_2019_01_214_p7_F03_1c_S214


title: um_berninger_2019_01_214_p9_F03_1c_S214


title: um_berninger_2019_01_201_p7_A02_1c_S201


title: um_berninger_2019_01_215_p7_G03_1c_S215


title: um_berninger_2019_01_197_p9_E01_1c_S197


title: um_berninger_2019_01_211_p9_C03_1c_S211


title: um_berninger_2019_01_209_p9_A03_1c_S209


title: um_berninger_2019_01_195_p9_C01_1c_S195


title: um_berninger_2019_01_209_p7_A03_1c_S209


title: um_berninger_2019_01_207_p9_G02_1c_S207


title: um_berninger_2019_01_211_p7_C03_1c_S211


title: um_berninger_2019_01_205_p9_E02_1c_S205


title: um_berninger_2019_01_205_p7_E02_1c_S205


title: um_berninger_2019_01_194_p9_B01_1c_S194


title: um_berninger_2019_01_204_p9_D02_1c_S204


title: um_berninger_2019_01_203_p7_C02_1c_S203


title: um_berninger_2019_01_194_p7_B01_1c_S194


title: um_berninger_2019_01_202_p9_B02_1c_S202


title: um_berninger_2019_01_206_p9_F02_1c_S206


title: um_berninger_2019_01_193_p7_A01_1c_S193


title: um_berninger_2019_01_200_p9_H01_1c_S200


title: um_berninger_2019_01_200_p7_H01_1c_S200


title: um_berninger_2019_01_199_p9_G01_1c_S199


title: um_berninger_2019_01_199_p7_G01_1c_S199


title: um_berninger_2019_01_191_p6_G12_1c_S191


title: um_berninger_2019_01_198_p7_F01_1c_S198


title: um_berninger_2019_01_197_p7_E01_1c_S197


title: um_berninger_2019_01_196_p9_D01_1c_S196


title: um_berninger_2019_01_190_p6_F12_1c_S190


title: um_berninger_2019_01_195_p7_C01_1c_S195


title: um_berninger_2019_01_196_p7_D01_1c_S196


title: um_berninger_2019_01_198_p9_F01_1c_S198


title: um_berninger_2019_01_193_p9_A01_1c_S193


title: um_berninger_2019_01_192_p6_H12_1c_S192


title: um_berninger_2019_01_192_p2_H12_1c_S192


title: um_berninger_2019_01_188_p2_D12_1c_S188


title: um_berninger_2019_01_185_p6_A12_1c_S185


title: um_berninger_2019_01_186_p2_B12_1c_S186


title: um_berninger_2019_01_188_p6_D12_1c_S188


title: um_berninger_2019_01_191_p2_G12_1c_S191


title: um_berninger_2019_01_183_p6_G11_1c_S183


title: um_berninger_2019_01_182_p2_F11_1c_S182


title: um_berninger_2019_01_181_p6_E11_1c_S181


title: um_berninger_2019_01_189_p6_E12_1c_S189


title: um_berninger_2019_01_189_p2_E12_1c_S189


title: um_berninger_2019_01_187_p2_C12_1c_S187


title: um_berninger_2019_01_180_p6_D11_1c_S180


title: um_berninger_2019_01_186_p6_B12_1c_S186


title: um_berninger_2019_01_180_p2_D11_1c_S180


title: um_berninger_2019_01_190_p2_F12_1c_S190


title: um_berninger_2019_01_185_p2_A12_1c_S185


title: um_berninger_2019_01_184_p6_H11_1c_S184


title: um_berninger_2019_01_184_p2_H11_1c_S184


title: um_berninger_2019_01_187_p6_C12_1c_S187


title: um_berninger_2019_01_183_p2_G11_1c_S183


title: um_berninger_2019_01_182_p6_F11_1c_S182


title: um_berninger_2019_01_178_p2_B11_1c_S178


title: um_berninger_2019_01_175_p6_G10_1c_S175


title: um_berninger_2019_01_181_p2_E11_1c_S181


title: um_berninger_2019_01_175_p2_G10_1c_S175


title: um_berninger_2019_01_174_p6_F10_1c_S174


title: um_berninger_2019_01_179_p6_C11_1c_S179


title: um_berninger_2019_01_172_p6_D10_1c_S172


title: um_berninger_2019_01_179_p2_C11_1c_S179


title: um_berninger_2019_01_178_p6_B11_1c_S178


title: um_berninger_2019_01_177_p6_A11_1c_S177


title: um_berninger_2019_01_177_p2_A11_1c_S177


title: um_berninger_2019_01_176_p6_H10_1c_S176


title: um_berninger_2019_01_171_p2_C10_1c_S171


title: um_berninger_2019_01_174_p2_F10_1c_S174


title: um_berninger_2019_01_173_p6_E10_1c_S173


title: um_berninger_2019_01_170_p2_B10_1c_S170


title: um_berninger_2019_01_169_p2_A10_1c_S169


title: um_berninger_2019_01_172_p2_D10_1c_S172


title: um_berninger_2019_01_173_p2_E10_1c_S173


title: um_berninger_2019_01_171_p6_C10_1c_S171


title: um_berninger_2019_01_167_p2_G09_1c_S167


title: um_berninger_2019_01_166_p6_F09_1c_S166


title: um_berninger_2019_01_176_p2_H10_1c_S176


title: um_berninger_2019_01_166_p2_F09_1c_S166


title: um_berninger_2019_01_168_p6_H09_1c_S168


title: um_berninger_2019_01_165_p6_E09_1c_S165


title: um_berninger_2019_01_167_p6_G09_1c_S167


title: um_berninger_2019_01_169_p6_A10_1c_S169


title: um_berninger_2019_01_165_p2_E09_1c_S165


title: um_berninger_2019_01_168_p2_H09_1c_S168


title: um_berninger_2019_01_170_p6_B10_1c_S170


title: um_berninger_2019_01_163_p2_C09_1c_S163


title: um_berninger_2019_01_161_p2_A09_1c_S161


title: um_berninger_2019_01_164_p6_D09_1c_S164


title: um_berninger_2019_01_164_p2_D09_1c_S164


title: um_berninger_2019_01_163_p6_C09_1c_S163


title: um_berninger_2019_01_158_p2_F08_0c_S158

description:
Yap-d03
sample for QC diagnostics


title: um_berninger_2019_01_156_p2_D08_1c_S156


title: um_berninger_2019_01_157_p6_E08_10c_S157

description:
Yap-d03
sample for QC diagnostics


title: um_berninger_2019_01_153_p6_A08_1c_S153


title: um_berninger_2019_01_154_p6_B08_1c_S154


title: um_berninger_2019_01_162_p2_B09_1c_S162


title: um_berninger_2019_01_161_p6_A09_1c_S161


title: um_berninger_2019_01_160_p6_H08_1c_S160


title: um_berninger_2019_01_150_p2_F07_1c_S150


title: um_berninger_2019_01_148_p6_D07_1c_S148


title: um_berninger_2019_01_149_p2_E07_1c_S149


title: um_berninger_2019_01_159_p6_G08_1c_S159


title: um_berninger_2019_01_162_p6_B09_1c_S162


title: um_berninger_2019_01_159_p2_G08_1c_S159


title: um_berninger_2019_01_144_p2_H06_1c_S144


title: um_berninger_2019_01_143_p6_G06_1c_S143


title: um_berninger_2019_01_158_p6_F08_0c_S158

description:
Yap-d03
sample for QC diagnostics


title: um_berninger_2019_01_160_p2_H08_1c_S160


title: um_berninger_2019_01_142_p2_F06_1c_S142


title: um_berninger_2019_01_157_p2_E08_10c_S157

description:
Yap-d03
sample for QC diagnostics


title: um_berninger_2019_01_141_p2_E06_1c_S141


title: um_berninger_2019_01_156_p6_D08_1c_S156


title: um_berninger_2019_01_145_p6_A07_1c_S145


title: um_berninger_2019_01_153_p2_A08_1c_S153


title: um_berninger_2019_01_155_p2_C08_1c_S155


title: um_berninger_2019_01_154_p2_B08_1c_S154


title: um_berninger_2019_01_144_p6_H06_1c_S144


title: um_berninger_2019_01_139_p6_C06_1c_S139


title: um_berninger_2019_01_152_p2_H07_1c_S152


title: um_berninger_2019_01_138_p6_B06_1c_S138


title: um_berninger_2019_01_152_p6_H07_1c_S152


title: um_berninger_2019_01_151_p6_G07_1c_S151


title: um_berninger_2019_01_151_p2_G07_1c_S151


title: um_berninger_2019_01_149_p6_E07_1c_S149


title: um_berninger_2019_01_136_p2_H05_1c_S136


title: um_berninger_2019_01_155_p6_C08_1c_S155


title: um_berninger_2019_01_148_p2_D07_1c_S148


title: um_berninger_2019_01_135_p2_G05_1c_S135


title: um_berninger_2019_01_147_p6_C07_1c_S147


title: um_berninger_2019_01_147_p2_C07_1c_S147


title: um_berninger_2019_01_133_p2_E05_10c_S133

description:
Control-d03
sample for QC diagnostics


title: um_berninger_2019_01_146_p2_B07_1c_S146


title: um_berninger_2019_01_132_p6_D05_1c_S132


title: um_berninger_2019_01_136_p6_H05_1c_S136


title: um_berninger_2019_01_150_p6_F07_1c_S150


title: um_berninger_2019_01_130_p6_B05_1c_S130


title: um_berninger_2019_01_145_p2_A07_1c_S145


title: um_berninger_2019_01_143_p2_G06_1c_S143


title: um_berninger_2019_01_142_p6_F06_1c_S142


title: um_berninger_2019_01_141_p6_E06_1c_S141


title: um_berninger_2019_01_130_p2_B05_1c_S130


title: um_berninger_2019_01_146_p6_B07_1c_S146


title: um_berninger_2019_01_129_p2_A05_1c_S129


title: um_berninger_2019_01_129_p6_A05_1c_S129


title: um_berninger_2019_01_128_p6_H04_1c_S128


title: um_berninger_2019_01_127_p6_G04_1c_S127


title: um_berninger_2019_01_125_p6_E04_1c_S125


title: um_berninger_2019_01_124_p2_D04_1c_S124


title: um_berninger_2019_01_122_p2_B04_1c_S122


title: um_berninger_2019_01_118_p2_F03_1c_S118


title: um_berninger_2019_01_140_p6_D06_1c_S140


title: um_berninger_2019_01_140_p2_D06_1c_S140


title: um_berninger_2019_01_139_p2_C06_1c_S139


title: um_berninger_2019_01_138_p2_B06_1c_S138


title: um_berninger_2019_01_137_p2_A06_1c_S137


title: um_berninger_2019_01_117_p6_E03_1c_S117


title: um_berninger_2019_01_137_p6_A06_1c_S137


title: um_berninger_2019_01_135_p6_G05_1c_S135


title: um_berninger_2019_01_134_p2_F05_0c_S134

description:
Control-d03
sample for QC diagnostics


title: um_berninger_2019_01_133_p6_E05_10c_S133

description:
Control-d03
sample for QC diagnostics


title: um_berninger_2019_01_117_p2_E03_1c_S117


title: um_berninger_2019_01_134_p6_F05_0c_S134

description:
Control-d03
sample for QC diagnostics


title: um_berninger_2019_01_116_p6_D03_1c_S116


title: um_berninger_2019_01_116_p2_D03_1c_S116


title: um_berninger_2019_01_132_p2_D05_1c_S132


title: um_berninger_2019_01_131_p6_C05_1c_S131


title: um_berninger_2019_01_131_p2_C05_1c_S131


title: um_berninger_2019_01_128_p2_H04_1c_S128


title: um_berninger_2019_01_126_p6_F04_1c_S126


title: um_berninger_2019_01_127_p2_G04_1c_S127


title: um_berninger_2019_01_126_p2_F04_1c_S126


title: um_berninger_2019_01_115_p6_C03_1c_S115


title: um_berninger_2019_01_115_p2_C03_1c_S115


title: um_berninger_2019_01_114_p2_B03_1c_S114


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title: um_berninger_2019_01_113_p6_A03_1c_S113


title: um_berninger_2019_01_124_p6_D04_1c_S124


title: um_berninger_2019_01_125_p2_E04_1c_S125


title: um_berninger_2019_01_123_p6_C04_1c_S123


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title: um_berninger_2019_01_123_p2_C04_1c_S123


title: um_berninger_2019_01_109_p2_E02_1c_S109


title: um_berninger_2019_01_122_p6_B04_1c_S122


title: um_berninger_2019_01_121_p6_A04_1c_S121


title: um_berninger_2019_01_120_p6_H03_1c_S120


title: um_berninger_2019_01_121_p2_A04_1c_S121


title: um_berninger_2019_01_120_p2_H03_1c_S120


title: um_berninger_2019_01_108_p2_D02_1c_S108


title: um_berninger_2019_01_119_p2_G03_1c_S119


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title: um_berninger_2019_01_106_p2_B02_1c_S106


title: um_berninger_2019_01_118_p6_F03_1c_S118


title: um_berninger_2019_01_105_p6_A02_1c_S105


title: um_berninger_2019_01_119_p6_G03_1c_S119


title: um_berninger_2019_01_105_p2_A02_1c_S105


title: um_berninger_2019_01_104_p6_H01_1c_S104


title: um_berninger_2019_01_103_p2_G01_1c_S103


title: um_berninger_2019_01_108_p6_D02_1c_S108


title: um_berninger_2019_01_103_p6_G01_1c_S103


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title: um_berninger_2019_01_112_p2_H02_1c_S112


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title: um_berninger_2019_01_114_p6_B03_1c_S114


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title: um_berninger_2019_01_111_p6_G02_1c_S111


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title: um_berninger_2019_01_097_p2_A01_1c_S97


title: um_berninger_2019_01_110_p2_F02_1c_S110


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title: um_berninger_2019_01_086_p1_F11_1c_S86


title: um_berninger_2019_01_087_p1_G11_1c_S87


title: um_berninger_2019_01_077_p1_E10_1c_S77


title: um_berninger_2019_01_076_p1_D10_1c_S76


title: um_berninger_2019_01_079_p1_G10_1c_S79


title: um_berninger_2019_01_078_p5_F10_1c_S78


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title: um_berninger_2019_01_074_p5_B10_1c_S74


title: um_berninger_2019_01_074_p1_B10_1c_S74


title: um_berninger_2019_01_075_p5_C10_1c_S75


title: um_berninger_2019_01_073_p1_A10_1c_S73


title: um_berninger_2019_01_073_p5_A10_1c_S73


title: um_berninger_2019_01_072_p5_H09_1c_S72


title: um_berninger_2019_01_072_p1_H09_1c_S72


title: um_berninger_2019_01_071_p5_G09_1c_S71


title: um_berninger_2019_01_071_p1_G09_1c_S71


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title: um_berninger_2019_01_068_p1_D09_1c_S68


title: um_berninger_2019_01_063_p5_G08_1c_S63


title: um_berninger_2019_01_063_p1_G08_1c_S63


title: um_berninger_2019_01_064_p1_H08_1c_S64


title: um_berninger_2019_01_062_p5_F08_0c_S62

description:
Yap-d03
sample for QC diagnostics


title: um_berninger_2019_01_065_p5_A09_1c_S65


title: um_berninger_2019_01_065_p1_A09_1c_S65


title: um_berninger_2019_01_064_p5_H08_1c_S64


title: um_berninger_2019_01_067_p5_C09_1c_S67


title: um_berninger_2019_01_062_p1_F08_0c_S62

description:
Yap-d03
sample for QC diagnostics


title: um_berninger_2019_01_066_p5_B09_1c_S66


title: PDB_N_3_IP_input

city: Kunming

first: Lian-Ming

last: Liang

state: Yunnan

address: No.2 North Cuihu Road

country: China

institute: Yunnan University

data_processing:
Raw sequencing data was first filtered by Trimmomatic (version 0.36), low-quality reads were discarded and the reads contaminated with adaptor sequences were trimmed.
The clean reads were used for protein binding site analysis. They were mapped to the reference genome of XXX (物种名称) from XXXXXX (参考基因组下载地址) using STAR software (version 2.5.3a) with default parameters.
The RSeQC（version 2.6）was used for reads distribution analysis.
The MACS2 software（Version 2.1.1）was used for peak calling. The bedtools（Version 2.25.0）was used for peaks annotation and peak distribution analysis.
bigWig files were generated using the genomicRanges R package. Score represents the normalized coverage of DNA fragments at a given genomic coordinate. narrowPeak files were generated using MACS v2 with default settings.
Assembly: JAQHRD000000000
Supplementary files format and content: bigWig

organism: Purpureocillium lavendulum

source_name: Mycelia

extract_protocol:
The tissue/cell was fixed in 1% formaldehyde for 10 min at room temperature by a vacuum pump, after which 0.125 M glycine was added and the mixture was sat for 5 min to terminate the crosslinking reaction. The tissue was then collected and frozen in liquid nitrogen, and grinded by tissue lyser. The grinded powder was treated with lysis buffer and nucleus was collected by centrifuging at 2000g for 5min. Then, nucleus was treated with nucleus lysis buffer and sonicated to fragment chromatin DNA.
The 10% lysis sonicated chromatin was stored and named “input”, and 80% was used in immunoprecipitation reactions with anti-xxx antibody（抗体厂商和货号）and named “IP”, and 10% was incubated with rabbit IgG (Cell Signaling Technology) as a negative control and named “IgG”，respectively. The DNA of input and IP was extracted by phenol-chloroform method. The high-throughput DNA sequencing libraries were prepared by using VAHTS Universal DNA Library Prep Kit for Illumina V3（Catalog NO. ND607, Vazyme）. The library products corresponding to 200-500 bps were enriched, quantified and finally sequenced on Novaseq 6000 sequencer (Illumina) with PE150 model.

value: Mycelia

value: Bio rep 3

value: wild-type

value: cultured on PDB+sodium nitrate, input


title: PDB_N_3_IP

value: cultured on PDB+sodium nitrate, ChIP with H3K14ac antibody


title: PDB_N_2_IP_input

value: Bio rep 2


title: PDB_N_1_IP_input

value: Bio rep 1


title: PDB_N_2_IP


title: um_berninger_2019_01_061_p5_E08_10c_S61

description:
Yap-d03
sample for QC diagnostics

value: adult neural stem cell

value: Yap1 overexpression


title: um_berninger_2019_01_060_p1_D08_1c_S60


title: PDB_3_input

value: cultured on PDB, input


title: um_berninger_2019_01_059_p5_C08_1c_S59


title: um_berninger_2019_01_070_p1_F09_1c_S70


title: PDB_3_IP

value: cultured on PDB, ChIP with H3K14ac antibody


title: PDB_2_input


title: um_berninger_2019_01_058_p5_B08_1c_S58


title: BT0510, glucose stress - alcohol stress, biological replicate 3

city: Hershey

first: James

middle: R

last: Broach

state: PA

address: 700 HMC Crescent Rd

department: Biochemistry and Molecular Biology

country: USA

institute: Pennsylvania State University College of Medicine

data_processing:
Reads were aligned to the S288C reference genome with hisat2 using the --no-mixed --no-discordant parametrs
FPKM values for each sample and its associated control sample are provided in the gene_exp.diff file with column q1 providing the sample FPKM value and column q2 the control FPKM value
For the analysis presented in Figure 1, each value represents the log2 ratio of the FPKM value for that sample relative to the average of the values for all nine samples for that gene across all nine samples in that particular experiment
Assembly: Saccharomyces cerevisiae S288C R64-1-1

organism: Saccharomyces cerevisiae

growth_protocol: Yeast cells were grown at 30 °C with aeration in liquid Synthetic Complete medium (SC) (yeast nitrogen base without amino acids, drop-out mix, 2% Glucose) to exponential growth phase (OD600nm = 1.0) before being exposed to sequential stresses.

extract_protocol:
Total RNA from three biological replicates for each treatment was extracted using the Qiagen RNeasy Mini kit (Qiagen, Hilden, Germany) following the manufacturer’s instructions.
Poly-A tailed RNA was captured, and reverse transcribed to complementary DNA (cDNA), which was used for library preparation by the Stranded Total RNA Prep (Illumina, USA) following the manufacturer’s protocol.

treatment_protocol: For osmotic stress, cells were incubated in liquid SC containing 1 M sorbitol for 30 minutes at 28ºC. Cells were subjected to oxidative stress by incubating them in SC containing 0.6mM hydrogen peroxide for 30 min. Glucose withdrawal was performed by transferring cells in SC + 2% glucose to SC + 0.05% glucose for 30 minutes. After each stress, cells were collected, washed with deionized water and reinoculated in SC supplemented with 8% (v/v) ethanol for 30 minutes at 28ºC at 160 rpm.

value: WT

value: Glucose withdrawal followed by ethanol stress


title: um_berninger_2019_01_058_p1_B08_1c_S58


title: um_berninger_2019_01_057_p5_A08_1c_S57


title: PDB_2_IP


title: PDB_1_input


title: um_berninger_2019_01_057_p1_A08_1c_S57


title: um_berninger_2019_01_056_p5_H07_1c_S56


title: um_berninger_2019_01_056_p1_H07_1c_S56


title: PDB_N_1_IP


title: um_berninger_2019_01_059_p1_C08_1c_S59


title: um_berninger_2019_01_060_p5_D08_1c_S60


title: PDB_1_IP


title: um_berninger_2019_01_061_p1_E08_10c_S61

description:
Yap-d03
sample for QC diagnostics


title: BT0510, glucose stress  - alcohol stress, biological replicate 2


title: BT0510, glucose stress - control, biological replicate 3

value: Glucose withdrawal control (pretreatment)


title: BT0510, glucose stress - glucose stress, biological replicate 2

value: Glocse withdrawal


title: BT0510, glucose stress - glucose stress, biological replicate 3


title: um_berninger_2019_01_055_p1_G07_1c_S55

value: control virus


title: um_berninger_2019_01_054_p5_F07_1c_S54


title: um_berninger_2019_01_054_p1_F07_1c_S54


title: BT0510, glucose stress - control, biological replicate 2


title: um_berninger_2019_01_053_p5_E07_1c_S53


title: Male_F1_7374_AT2cells

city: Philadelphia

first: Sarah

middle: C

last: Pyfrom

address: 3800 Spruce St

institute: University of Pennsylvania

data_processing:
Reads were aligned to the mm10 genome build using the ultrafast STAR aligner (Dobin et al., 2013) with default parameters and “—quantmode GeneCounts” to quantify gene expression. Read counts generated by STAR were used as input for the DeSeq2 R package to identify differentially expressed genes between male and female samples. Reads per million (RPM) were also calculated and a gene was considered expressed if it had an RPM >1 in all female samples.
Assembly: mm10
Supplementary files format and content: GeneExpression_Reads_RPM.xlsx contains two sheets, "Reads" and "RPM". Each samples is a column, and the gene ID, Name, and chromosome. The "Reads" sheet includes the rede count as calculated by STAR, and the RPM sheet is Reads per Million calculated from STAR output.

source_name: Lung

growth_protocol: Lung were inflated with 5 U/mL dispase II in HBSS (Thermo Fisher Scientific), tying off the trachea and cutting lobes away from the main stem bronchi. Lungs were incubated in dispase for 45 minutes shaking at room temperature and mechanically dissociated by pipetting in sort buffer (SB; Dulbecco’s modified Eagle’s medium (DMEM) (Thermo Fisher Scientific) + 2% cosmic calf serum (CC; Thermo Fisher Scientific) + 1% P/S). After pelleting at 550 × g for 5 minutes at 4 °C, the whole-lung suspension was treated with Red Blood Cell Lysis Buffer (Millipore Sigma) for 5 minutes, pelleted, and resuspended in SB + 1:1000 DNase I (Millipore Sigma) for a 45 minutes recovery period shaking at 37 °C. Whole-lung suspension was then resuspended in SB + 1:50 TruStain FcX™ (anti-mouse CD16/32) Antibody (BioLegend) for a 10 minutes blocking period at 37 °C. For sorts from C57BL6 mice, AT2 cells were collected using allophycocyanin (APC)/Cy7-conjugated rat anti-mouse CD45 antibody (1:200, BioLegend, 30-F11), Alexa Fluor® 488-conjugated rat anti-mouse CD326 (EpCAM) antibody (1:200, BioLegend, G8.8), and phycoerythrin (PE)-conjugated rat anti-mouse CD104 (integrin β4) antibody (1:100, BioLegend, 346-11A). Staining was performed for 45 minutes at 4 °C, followed by a final spin-down at 550 × g for 5 minutes at 4 °C. Stained cells and fluorescence minus one controls were then resuspended in SB + 1:1000 DNase + 1:1000 Draq7 (Beckman Coulter) as a live/dead stain. All FACS sorting was done on a BD FACS Aria Fusion (BD Biosciences) and cells were collected in Falcon™ round-bottom polystyrene tubes (Thermo Fisher Scientific) in 300 μL DMEM + 20% CC + 2% P/S.

extract_protocol:
500,000 to 1 million sorted AT2 cells were sorted from male and female F1 mus x cast mice, and placed in Trizol. Total RNA isolations were performed following manufacturers protocol.
For library preparation, we used the TruSeq Stranded mRNA Library Prep (20020594, Illumina). Prepared libraries were checked for quality using TapeStation, pooled, and subsequently run on the Illumina NextSeq 500 using 75bp single-end reads.

value: Lung

value: Alveolar Type 2 (AT2)

value: F1 mus/cast

tag: Sex

value: male


title: Male_F1_7460_AT2cells


title: Male_F1_7375_AT2cells


title: um_berninger_2019_01_053_p1_E07_1c_S53


title: BT0510, glucose stress - alcohol stress, biological replicate 1


title: um_berninger_2019_01_052_p5_D07_1c_S52


title: um_berninger_2019_01_052_p1_D07_1c_S52


title: Male_F1_7459_AT2cells


title: um_berninger_2019_01_055_p5_G07_1c_S55


title: um_berninger_2019_01_051_p5_C07_1c_S51


title: um_berninger_2019_01_050_p5_B07_1c_S50


title: Female_F1_712_AT2cells

value: female


title: um_berninger_2019_01_050_p1_B07_1c_S50


title: BT0510, glucose stress - control, biological replicate 1


title: um_berninger_2019_01_049_p1_A07_1c_S49


title: um_berninger_2019_01_049_p5_A07_1c_S49


title: um_berninger_2019_01_048_p5_H06_1c_S48


title: Female_F1_479_AT2cells


title: BT0510, Oxidative stress - alcohol stress, biological replicate 3

value: Oxidative stress followed by ethanol stress


title: BT0510, Oxidative stress - oxidative stress, biological replicate 3

value: Oxidative stress


title: um_berninger_2019_01_051_p1_C07_1c_S51


title: um_berninger_2019_01_047_p5_G06_1c_S47


title: um_berninger_2019_01_048_p1_H06_1c_S48


title: Female_F1_673_AT2cells


title: BT0510, Oxidative stress - contro, biological replicate 3l

value: Oxidative stress control (pretreatment)


title: BT0510, Oxidative stress  - alcohol stress, biological replicate 2


title: BT0510, glucose stress - glucose stress, biological replicate 1


title: um_berninger_2019_01_046_p1_F06_1c_S46

value: adult neural stem cell


title: BT0510Oxidative stress 2 - oxidative stress, biological replicate 2


title: embryonic stem cells, ATRA, rep2 [mESC_DNMT3AWT_ATRA_2]

city: Houston

first: Margaret

last: Goodell

state: TX

address: One Baylor Plaza, N1030

institute: Baylor College of Medicine

description:
mESC.txt
Processed tables include the average IR score for each phenotype and group. The intron retention (IR) score was then computed as the ratio of the RPKM-normalized “intronic” read density over the RPKM-normalized “spanning” read density.

data_processing:
Hisat2-aligned reads were filtered for proper-paired reads (-f 2 flag in samtools).
Intron annotations were parsed from RefSeq gene annotation files and were filtered to exclude features that overlap genomic loci on the same strand. Reads mapping to introns were counted using the Python module Pysam (https://github.com/pysam-developers/pysam). For each intron feature, we defined the following two read classes: (1) “intronic” reads mapping at least 6 bases contiguously within the intron and (2) “spanning” reads with ends mapping to the flanking exons. The intron retention (IR) score was then computed as the ratio of the RPKM-normalized “intronic” read density over the RPKM-normalized “spanning” read density. Introns with <10 spanning reads were excluded from all analyses. For analysis of introns with robust changes in expression, a spanning read threshold of 50 was implemented, and only introns with >2-fold changes in the IR score were kept. Statistical analyses were performed using R. Empirical cumulative distributions of IR scores were compared, and p-values estimated using a two-sided Kolmogorov-Smirnov test.
Assembly: mm10, hg38
Supplementary files format and content: tab-delimited text files include Intron rentention ratios for each Sample

extract_protocol:
Total RNA was isolated from mouse HSCs and human HSPCs using PicoPure RNA isolation kit (KIT0204). RNA from mESC and hESC was isolated using the Qiagen mini kit
mRNA libraries for RNA-seq were prepared using SMARTER mRNA-Seq Library Prep Kit following manufacturer's protocols.

value: Embryonic Stem Cells

value: ATRA

value: 24 hours

tag: ir group


title: embryonic stem cells, ATRA, rep1 [mESC_DNMT3AKO_ATRA_1]

value: Dnmt3a Knockout


title: um_berninger_2019_01_044_p5_D06_1c_S44

value: Yap1 overexpression


title: Female_F1_742_AT2cells


title: BT0510, Oxidative stress  - control, biological replicate 2

value: WT


title: embryonic stem cells, ATRA, rep1 [mESC_DNMT3AWT_ATRA_1]


title: um_berninger_2019_01_044_p1_D06_1c_S44


title: BT0510, Oxidative stress 1 - alcohol stress, biological replicate 1


title: um_berninger_2019_01_043_p5_C06_1c_S43


title: embryonic stem cells, ATRA, rep2 [mESC_DNMT3AKO_ATRA_2]


title: um_berninger_2019_01_043_p1_C06_1c_S43


title: hematopoietic stem cells, DNMT3AKO, rep2 [mHSC_DNMT3AKO_2]

description:
mHSC.txt
Processed tables include the average IR score for each phenotype and group. The intron retention (IR) score was then computed as the ratio of the RPKM-normalized “intronic” read density over the RPKM-normalized “spanning” read density.

value: Hematopoietic Stem Cells


title: BT0510, Oxidative stress  - oxidative stress, biological replicate 1


title: um_berninger_2019_01_047_p1_G06_1c_S47


title: um_berninger_2019_01_046_p5_F06_1c_S46


title: um_berninger_2019_01_045_p1_E06_1c_S45


title: um_berninger_2019_01_042_p5_B06_1c_S42


title: hematopoietic stem cells, DNMT3AKO, rep1 [mHSC_DNMT3AKO_1]


title: hematopoietic stem cells, DNMT3AWT, rep2 [mHSC_DNMT3AWT_2]


title: um_berninger_2019_01_041_p1_A06_1c_S41


title: BT0510, Osmotic stress - alcohol stress, biological replicate 3

value: Osmotic stress followed by ethanol stress


title: um_berninger_2019_01_040_p5_H05_1c_S40

value: control virus


title: um_berninger_2019_01_045_p5_E06_1c_S45


title: BT0510, Osmotic stress  - osmotic stress, biological replicate 3

value: Osmotic stress


title: hematopoietic stem cells, DNMT3AWT, rep1 [mHSC_DNMT3AWT_1]


title: um_berninger_2019_01_039_p5_G05_1c_S39