title: 11G_M_3015


title: 11G_M_3014

status: Public on Apr 25 2023

type: SRA

city: La Jolla

first: Joseph

middle: R

last: Ecker

state: CA

address: 10010 North Torrey Pines Road

department: Genomic Analysis Laboratory

country: USA

institute: HHMI-Salk-Institute

library_source: genomic

data_processing:
Reads trimed with Cutadapt for adapters and low quality bases (Phred score >= 20)
The resulting files are mapped to in-silico bisulfite converted mm10 reference genome using Bismark.
The raw BAM file will be filtered using samtools to filter reads by MAPQ > 10 and use Picard to remove PCR duplicates
Tab-delimited files (ALLC files) describing the quantity of unmethylated and methylated cytosine base calls will be generated with in-house developing package using the filtered BAM files
Assembly: mm10
Supplementary files format and content: tab-delimited files (ALLC files) describing the quantity of unmethylated and methylated cytosine base calls. Columns are: 1. Chromosome, 2. Position, 3. Strand, 4. Cytosin Context, 5. methylated base call, 6. total mapped base call, 7. not used, place holder column
Library strategy: snmC-seq3

molecule: genomic DNA

organism: Mus musculus

source_name: C57BL/6J Male P56 Mouse Brain

growth_protocol: All mice are C57BL/6J Male, brain dissected in P56

extract_protocol:
the brain of P56 male C57BL/6J mouse will be removed and cut into 600 microns thick coronal sections using a tissue matrix. Then each region will be microdissected from the coronal tissue sections based on identified landmarks and brain atlas coordinates, as defined in Allen brain atlas CCF3 (Avaliable at: http://atlas.brain-map.org). For each dissection region, the tissue from several littermate mice will be combined together into to separate replicate groups. The number of animals in a replicate depends on the size of the tissue. Nuclei preparation will be stained with the fluorescently labeled anti-NeuN body and nucleic acid stain Hoechst 33342.
Library prepared following protocol discribed in Luo, Chongyuan, Angeline Rivkin, Jingtian Zhou, Justin P. Sandoval, Laurie Kurihara, Jacinta Lucero, Rosa Castanon, et al. 2018. “Robust Single-Cell DNA Methylome Profiling with snmC-seq2.” Nature Communications 9 (1): 3824.

tag: brain region

tag: age

tag: strain


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title: 11G_M_1419


title: 11G_M_1421


title: 11G_M_1420


title: 11G_M_1423


title: 11G_M_1417


title: 11G_M_1415


title: 11G_M_1416


title: 11G_M_1414


title: 11G_M_1413


title: 11G_M_1435


title: 11G_M_1412


title: 11G_M_1410


title: 11G_M_1409


title: 11G_M_1407


title: 11G_M_1341


title: 11G_M_1408


title: 11G_M_1337


title: 11G_M_1422


title: 11G_M_1334


title: 11G_M_1335


title: 11G_M_1339


title: 11G_M_1333


title: 11G_M_1338


title: 11G_M_1329


title: 11G_M_1330


title: 11G_M_1336


title: 11G_M_1328


title: 11G_M_1418


title: 11G_M_1332


title: 11G_M_1331


title: 11G_M_1340


title: 11G_M_1326


title: 11G_M_1325


title: 11G_M_1424


title: 11G_M_1324


title: 11G_M_1411


title: 11G_M_1323


title: 11G_M_1321


title: 11G_M_1322


title: 11G_M_1342


title: 11G_M_1320


title: 11G_M_1319


title: 11G_M_1318


title: 11G_M_1316


title: 11G_M_1317


title: 11G_M_1315


title: 11G_M_1313


title: 11G_M_1314


title: 11G_M_1311


title: 11G_M_1312


title: 11G_M_1327


title: 11G_M_1309


title: 11G_M_1307


title: 11G_M_1306


title: 11G_M_1305


title: 11G_M_1304


title: 11G_M_1303


title: 11G_M_1302


title: 11G_M_1296


title: 11G_M_1300


title: 11G_M_1299


title: 11G_M_1298


title: 11G_M_1297


title: 11G_M_1295


title: 11G_M_1301


title: 11G_M_1292


title: 11G_M_1293


title: 11G_M_1288


title: 11G_M_1291


title: 11G_M_1287


title: 11G_M_1310


title: 11G_M_1308


title: 11G_M_1286


title: 11G_M_1285


title: 11G_M_1284


title: 11G_M_1279


title: 11G_M_1281


title: 11G_M_1280


title: 11G_M_1277


title: 11G_M_1278


title: 11G_M_1282


title: 11G_M_1283


title: 11G_M_1273


title: 11G_M_1294


title: 11G_M_1272


title: 11G_M_1270


title: 11G_M_1289


title: 11G_M_1269


title: 11G_M_1266


title: 11G_M_1268


title: 11G_M_1275


title: 11G_M_1264


title: 11G_M_1265


title: 11G_M_1262


title: 11G_M_1261


title: 11G_M_1260


title: 11G_M_1276


title: 11G_M_1263


title: 11G_M_1259


title: 11G_M_1274


title: 11G_M_1257


title: 11G_M_1271


title: 11G_M_1255


title: 11G_M_1252


title: 11G_M_1248


title: 11G_M_1253


title: 11G_M_1258


title: 11G_M_1267


title: 11G_M_1251


title: 11G_M_1250


title: 11G_M_1256


title: 11G_M_1249


title: 11G_M_1241


title: 11G_M_1243


title: 11G_M_1240


title: 11G_M_1239


title: 11G_M_1242


title: 11G_M_1247


title: 11G_M_1245


title: 11G_M_1246


title: 11G_M_1244


title: 11G_M_1236


title: 11G_M_1235


title: 11G_M_1234


title: 11G_M_1237


title: 11G_M_1232


title: 11G_M_1238


title: 11G_M_1230


title: 11G_M_1233


title: 11G_M_1229


title: 11G_M_1227


title: 11G_M_1223


title: 11G_M_1220


title: 11G_M_1218


title: 11G_M_1221


title: 11G_M_1225


title: 11G_M_1224


title: 11G_M_1219


title: 11G_M_1231


title: 11G_M_1216


title: 11G_M_1150


title: 11G_M_1147


title: 11G_M_1226


title: 11G_M_1149


title: 11G_M_1145


title: 11G_M_1151


title: 11G_M_1215


title: 11G_M_1142


title: 11G_M_1141


title: 11G_M_1139


title: 11G_M_1222


title: 11G_M_1143


title: 11G_M_1146


title: 11G_M_1144


title: 11G_M_1217


title: 11G_M_1134


title: 11G_M_1136


title: 11G_M_1137


title: 11G_M_1132


title: 11G_M_1133


title: 11G_M_1135


title: 11G_M_1131


title: 11G_M_1130


title: 11G_M_1128


title: 11G_M_1129


title: 11G_M_1126


title: 11G_M_1127


title: 11G_M_1124


title: 11G_M_1148


title: 11G_M_1125


title: 11G_M_1140


title: 11G_M_1122


title: 11G_M_1120


title: 11G_M_1119


title: 11G_M_1121


title: 11G_M_1118


title: 11G_M_1117


title: 11G_M_1116


title: 11G_M_1113


title: 11G_M_1111


title: 11G_M_1110


title: 11G_M_1112


title: 11G_M_1114


title: 11G_M_1107


title: 11G_M_1115


title: 11G_M_1109


title: 11G_M_1103


title: 11G_M_1105


title: 11G_M_1100


title: 11G_M_1101


title: 11G_M_1099


title: 11G_M_1098


title: 11G_M_1096


title: 11G_M_1123


title: 11G_M_1097


title: 11G_M_1095


title: 11G_M_1092


title: 11G_M_1093


title: 11G_M_1090


title: 11G_M_1094


title: 11G_M_1091


title: 11G_M_1089


title: 11G_M_1088


title: 11G_M_958


title: 11G_M_957


title: 11G_M_1104


title: 11G_M_959


title: 11G_M_956


title: 11G_M_954


title: 11G_M_955


title: 11G_M_953


title: 11G_M_950


title: 11G_M_951


title: 11G_M_1108


title: 11G_M_949


title: 11G_M_1106


title: 11G_M_947


title: 11G_M_952


title: 11G_M_946


title: 11G_M_944


title: 11G_M_943


title: 11G_M_942


title: 11G_M_948


title: 11G_M_941


title: 11G_M_939


title: 11G_M_937


title: 11G_M_934


title: 11G_M_935


title: 11G_M_1102


title: 11G_M_929


title: 11G_M_930


title: 11G_M_928


title: 11G_M_927


title: 11G_M_932


title: 11G_M_925


title: 11G_M_924


title: 11G_M_923


title: 11G_M_945


title: 11G_M_922


title: 11G_M_938


title: 11G_M_919


title: 11G_M_936


title: 11G_M_920


title: 11G_M_921


title: 11G_M_918


title: 11G_M_916


title: 11G_M_914


title: 11G_M_915


title: 11G_M_940


title: 11G_M_931


title: 11G_M_933


title: 11G_M_917


title: 11G_M_911


title: 11G_M_909


title: 11G_M_908


title: 11G_M_910


title: 11G_M_906


title: 11G_M_905


title: 11G_M_904


title: 11G_M_903


title: 11G_M_901


title: 11G_M_907


title: 11G_M_900


title: 11G_M_897


title: 11G_M_899


title: 11G_M_894


title: 11G_M_895


title: 11G_M_898


title: 11G_M_896


title: 11G_M_926


title: 11G_M_887


title: 11G_M_892


title: 11G_M_912


title: 11G_M_886


title: 11G_M_890


title: 11G_M_889


title: 11G_M_913


title: 11G_M_884


title: 11G_M_885


title: 11G_M_882


title: 11G_M_893


title: 11G_M_888


title: 11G_M_881


title: 11G_M_891


title: 11G_M_883


title: 11G_M_880


title: 11G_M_878


title: 11G_M_902


title: 11G_M_874


title: 11G_M_876


title: 11G_M_875


title: 11G_M_868


title: 11G_M_873


title: 11G_M_871


title: 11G_M_866


title: 11G_M_860


title: 11G_M_863


title: 11G_M_867


title: 11G_M_856


title: 11G_M_877


title: 11G_M_854


title: 11G_M_857


title: 11G_M_861


title: 11G_M_862


title: 11G_M_858


title: 11G_M_853


title: 11G_M_851


title: 11G_M_850


title: 11G_M_865


title: 11G_M_849


title: 11G_M_869


title: 11G_M_855


title: 11G_M_859


title: 11G_M_847


title: 11G_M_844


title: 11G_M_848


title: 11G_M_872


title: 11G_M_852


title: 11G_M_846


title: 11G_M_842


title: 11G_M_840


title: 11G_M_839


title: 11G_M_841


title: 11G_M_838


title: 11G_M_879


title: 11G_M_835


title: 11G_M_832


title: 11G_M_836


title: 11G_M_833


title: 11G_M_837


title: 11G_M_765


title: 11G_M_845


title: 11G_M_767


title: 11G_M_762


title: 11G_M_763


title: 11G_M_761


title: 11G_M_760


title: 11G_M_759


title: 11G_M_764


title: 11G_M_756


title: 11G_M_755


title: 11G_M_757


title: 11G_M_843


title: 11G_M_754


title: 11G_M_753


title: 11G_M_870


title: 11G_M_864


title: 11G_M_834


title: 11G_M_766


title: 11G_M_751


title: 11G_M_752


title: 11G_M_750


title: 11G_M_748


title: 11G_M_746


title: 11G_M_749


title: 11G_M_743


title: 11G_M_742


title: 11G_M_758


title: 11G_M_747


title: 11G_M_739


title: 11G_M_738


title: 11G_M_741


title: 11G_M_744


title: 11G_M_745


title: 11G_M_740


title: 11G_M_725


title: 11G_M_736


title: 11G_M_737


title: 11G_M_729


title: 11G_M_718


title: 11G_M_712


title: 11G_M_721


title: 11G_M_714


title: 11G_M_730


title: 11G_M_710


title: 11G_M_723


title: 11G_M_713


title: 11G_M_731


title: 11G_M_717


title: 11G_M_722


title: 11G_M_716


title: 11G_M_720


title: 11G_M_727


title: 11G_M_733


title: 11G_M_728


title: 11G_M_732


title: 11G_M_734


title: 11G_M_735


title: 11G_M_711


title: 11G_M_709


title: 11G_M_719


title: 11G_M_715


title: 11G_M_726


title: 11G_M_724


title: 11G_M_708


title: 11G_M_704


title: 11G_M_705


title: 11G_M_706


title: 11G_M_707


title: 11G_M_639


title: 11G_M_629


title: 11G_M_632


title: 11G_M_627


title: 11G_M_637


title: 11G_M_634


title: 11G_M_638


title: 11G_M_633


title: 11G_M_628


title: 11G_M_625


title: 11G_M_630


title: 11G_M_636


title: 11G_M_631


title: 11G_M_617


title: 11G_M_626


title: 11G_M_624


title: 11G_M_621


title: 11G_M_622


title: 11G_M_613


title: 11G_M_619


title: 11G_M_618


title: 11G_M_620


title: 11G_M_615


title: 11G_M_616


title: 11G_M_635


title: 11G_M_614


title: 11G_M_611


title: 11G_M_610


title: 11G_M_609


title: 11G_M_612


title: 11G_M_607


title: 11G_M_598


title: 11G_M_600


title: 11G_M_603


title: 11G_M_594


title: 11G_M_604


title: 11G_M_599


title: 11G_M_605


title: 11G_M_593


title: 11G_M_608


title: 11G_M_590


title: 11G_M_591


title: 11G_M_592


title: 11G_M_606


title: 11G_M_587


title: 11G_M_585


title: 11G_M_584


title: 11G_M_582


title: 11G_M_586


title: 11G_M_583


title: 11G_M_597


title: 11G_M_581


title: 11G_M_595


title: 11G_M_580


title: 11G_M_588


title: 11G_M_579


title: 11G_M_577


title: 11G_M_510


title: 11G_M_576


title: 11G_M_578


title: 11G_M_508


title: 11G_M_509


title: 11G_M_507


title: 11G_M_506


title: 11G_M_505


title: 11G_M_504


title: 11G_M_503


title: 11G_M_589


title: 11G_M_502


title: 11G_M_500


title: 11G_M_498


title: 11G_M_497


title: 11G_M_496


title: 11G_M_495


title: 11G_M_601


title: 11G_M_494


title: 11G_M_501


title: 11G_M_511


title: 11G_M_493


title: 11G_M_489


title: 11G_M_490


title: 11G_M_487


title: 11G_M_488


title: 11G_M_486


title: 11G_M_485


title: 11G_M_484


title: 11G_M_482


title: 11G_M_479


title: 11G_M_481


title: 11G_M_480


title: 11G_M_478


title: 11G_M_475


title: 11G_M_477


title: 11G_M_499


title: 11G_M_476


title: 11G_M_472


title: 11G_M_473


title: 11G_M_492


title: 11G_M_470


title: 11G_M_471


title: 11G_M_468


title: 11G_M_469


title: 11G_M_465


title: 11G_M_467


title: 11G_M_464


title: 11G_M_463


title: 11G_M_466


title: 11G_M_462


title: 11G_M_623


title: 11G_M_459


title: 11G_M_455


title: 11G_M_454


title: 11G_M_457


title: 11G_M_458


title: 11G_M_456


title: 11G_M_474


title: 11G_M_460


title: 11G_M_491


title: 11G_M_452


title: 11G_M_451


title: 11G_M_450


title: 11G_M_483


title: 11G_M_453


title: 11G_M_449


title: 11G_M_447


title: 11G_M_448


title: 11G_M_445


title: 11G_M_444


title: 11G_M_446


title: 11G_M_443


title: 11G_M_439


title: 11G_M_461


title: 11G_M_441


title: 11G_M_442


title: 11G_M_440


title: 11G_M_436


title: 11G_M_437


title: 11G_M_438


title: 11G_M_435


title: 11G_M_434


title: 11G_M_433


title: 11G_M_430


title: 11G_M_428


title: 11G_M_431


title: 11G_M_432


title: 11G_M_429


title: 11G_M_427


title: 11G_M_426


title: 11G_M_424


title: 11G_M_425


title: 11G_M_422


title: 11G_M_423


title: 11G_M_418


title: 11G_M_420


title: 11G_M_415


title: 11G_M_417


title: 11G_M_419


title: 11G_M_408


title: 11G_M_406


title: 11G_M_414


title: 11G_M_405


title: 11G_M_413


title: 11G_M_416


title: 11G_M_411


title: 11G_M_410


title: 11G_M_407


title: 11G_M_401


title: 11G_M_398


title: 11G_M_404


title: 11G_M_421


title: 11G_M_400


title: 11G_M_409


title: 11G_M_412


title: 11G_M_394


title: 11G_M_399


title: 11G_M_396


title: 11G_M_395


title: 11G_M_403


title: 11G_M_402


title: 11G_M_392


title: 11G_M_393


title: 11G_M_391


title: 11G_M_390


title: 11G_M_389


title: 11G_M_387


title: 11G_M_383


title: 11G_M_382


title: 11G_M_381


title: 11G_M_386


title: 11G_M_384


title: 11G_M_380


title: 11G_M_397


title: 11G_M_377


title: 11G_M_378


title: 11G_M_379


title: 11G_M_375


title: 11G_M_376


title: 11G_M_373


title: 11G_M_372


title: 11G_M_371


title: 11G_M_366


title: 11G_M_367


title: 11G_M_368


title: 11G_M_369


title: 11G_M_365


title: 11G_M_364


title: 11G_M_370


title: 11G_M_363


title: 11G_M_361


title: 11G_M_385


title: 11G_M_362


title: 11G_M_360


title: 11G_M_359


title: 11G_M_358


title: 11G_M_357


title: 11G_M_355


title: 11G_M_354


title: 11G_M_356


title: 11G_M_353


title: 11G_M_350


title: 11G_M_374


title: 11G_M_348


title: 11G_M_349


title: 11G_M_347


title: 11G_M_351


title: 11G_M_352


title: 11G_M_346


title: 11G_M_345


title: 11G_M_344


title: 11G_M_343


title: 11G_M_339


title: 11G_M_340


title: 11G_M_342


title: 11G_M_341


title: 11G_M_335


title: 11G_M_337


title: 11G_M_333


title: 11G_M_331


title: 11G_M_336


title: 11G_M_330


title: 11G_M_338


title: 11G_M_332


title: 11G_M_327


title: 11G_M_326


title: 11G_M_322


title: 11G_M_325


title: 11G_M_323


title: 11G_M_328


title: 11G_M_321


title: 11G_M_320


title: 11G_M_253


title: 11G_M_254


title: 11G_M_252


title: 11G_M_250


title: 11G_M_248


title: 11G_M_247


title: 11G_M_334


title: 11G_M_245


title: 11G_M_244


title: 11G_M_243


title: 11G_M_246


title: 11G_M_329


title: 11G_M_242


title: 11G_M_324


title: 11G_M_241


title: 11G_M_237


title: 11G_M_240


title: 11G_M_236


title: 11G_M_238


title: 11G_M_239


title: 11G_M_255


title: 11G_M_229


title: 11G_M_232


title: 11G_M_233


title: 11G_M_231


title: 11G_M_228


title: 11G_M_226


title: 11G_M_225


title: 11G_M_224


title: 11G_M_249


title: 11G_M_220


title: 11G_M_223


title: 11G_M_221


title: 11G_M_219


title: 11G_M_222


title: 11G_M_216


title: 11G_M_215


title: 11G_M_217


title: 11G_M_218


title: 11G_M_214


title: 11G_M_235


title: 11G_M_234


title: 11G_M_230


title: 11G_M_212


title: 11G_M_213


title: 11G_M_227


title: 11G_M_206


title: 11G_M_205


title: 11G_M_211


title: 11G_M_207


title: 11G_M_209


title: 11G_M_204


title: 11G_M_208


title: 11G_M_201


title: 11G_M_202


title: 11G_M_200


title: 11G_M_198


title: 11G_M_195


title: 11G_M_127


title: 11G_M_194


title: 11G_M_199


title: 11G_M_126


title: 11G_M_192


title: 11G_M_125


title: 11G_M_210


title: 11G_M_196


title: 11G_M_124


title: 11G_M_122


title: 11G_M_203


title: 11G_M_123


title: 11G_M_121


title: 11G_M_120


title: 11G_M_119


title: 11G_M_117


title: 11G_M_118


title: 11G_M_115


title: 11G_M_112


title: 11G_M_113


title: 11G_M_110


title: 11G_M_114


title: 11G_M_111


title: 11G_M_116


title: 11G_M_197


title: 11G_M_109


title: 11G_M_108


title: 11G_M_193


title: 11G_M_107


title: 11G_M_105


title: 11G_M_104


title: 11G_M_102


title: 11G_M_103


title: 11G_M_106


title: 11G_M_99


title: 11G_M_101


title: 11G_M_96


title: 11G_M_100


title: 11G_M_97


title: 11G_M_92


title: 11G_M_95


title: 11G_M_94


title: 11G_M_91


title: 11G_M_93


title: 11G_M_87


title: 11G_M_90


title: 11G_M_86


title: 11G_M_88


title: 11G_M_82


title: 11G_M_84


title: 11G_M_85


title: 11G_M_80


title: 11G_M_81


title: 11G_M_78


title: 11G_M_83


title: 11G_M_79


title: 11G_M_77


title: 11G_M_74


title: 11G_M_73


title: 11G_M_76


title: 11G_M_71


title: 11G_M_70


title: 11G_M_72


title: 11G_M_68


title: 11G_M_89


title: 11G_M_75


title: 11G_M_69


title: 11G_M_67


title: 11G_M_65


title: 11G_M_64


title: 11G_M_66


title: 12B_M_3032

data_processing:
Reads trimed with Cutadapt for adapters and low quality bases (Phred score >= 20)
The resulting files are mapped to in-silico bisulfite converted mm10 reference genome using Bismark.
The raw BAM file will be filtered using samtools to filter reads by MAPQ > 10 and use Picard to remove PCR duplicates
Tab-delimited files (ALLC files) describing the quantity of unmethylated and methylated cytosine base calls will be generated with in-house developing package using the filtered BAM files
Assembly: mm10
Supplementary files format and content: tab-delimited files (ALLC files) describing the quantity of unmethylated and methylated cytosine base calls. Columns are: 1. Chromosome, 2. Position, 3. Strand, 4. Cytosin Context, 5. methylated base call, 6. total mapped base call, 7. not used, place holder column
Library strategy: snmC-seq2


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title: 12B_M_1784


title: 11J_M_1069


title: 11J_M_1067


title: 11J_M_1068


title: 12B_M_1783


title: 11J_M_1079


title: 11J_M_1065


title: 11J_M_1066


title: 12B_M_1781


title: 12B_M_1780


title: 12B_M_1779


title: 11J_M_1064


title: 11J_M_1062


title: 12B_M_1789


title: 12B_M_1778


title: 11J_M_1063


title: 12B_M_1787


title: 11J_M_1061


title: 12B_M_1775


title: 11J_M_1060


title: 11J_M_1059


title: 11J_M_1058


title: 12B_M_1776


title: 12B_M_1773


title: 11J_M_1057


title: 12B_M_1771


title: 12B_M_1772


title: 11J_M_1056


title: 12B_M_1769


title: 12B_M_1782


title: 11J_M_1055


title: 12B_M_1766


title: 11J_M_1054


title: 12B_M_1768


title: 11J_M_1053


title: 12B_M_1765


title: 12B_M_1764


title: 11J_M_1051


title: 11J_M_1050


title: 11J_M_1049


title: 12B_M_1777


title: 12B_M_1762


title: 12B_M_1761


title: 12B_M_1763


title: 12B_M_1758


title: 11J_M_1048


title: 11J_M_1047


title: 12B_M_1759


title: 12B_M_1774


title: 11J_M_1046


title: 11J_M_1045


title: 12B_M_1756


title: 12B_M_1755


title: 11J_M_1044


title: 12B_M_1757


title: 12B_M_1754


title: 12B_M_1753


title: 11J_M_1041


title: 11J_M_1043


title: 12B_M_1751


title: 12B_M_1752


title: 11J_M_1040


title: 11J_M_1042


title: 11J_M_1038


title: 11J_M_1052


title: 11J_M_1039


title: 12B_M_1750


title: 11J_M_1037


title: 12B_M_1748


title: 11J_M_1036


title: 12B_M_1749


title: 11J_M_1035


title: 12B_M_1746


title: 12B_M_1747


title: 12B_M_1745


title: 12B_M_1744


title: 11J_M_1031


title: 11J_M_1030


title: 11J_M_1032


title: 12B_M_1742


title: 11J_M_1029


title: 12B_M_1740


title: 11J_M_1033


title: 12B_M_1741


title: 11J_M_1028


title: 12B_M_1739


title: 11J_M_1027


title: 11J_M_1026


title: 12B_M_1738


title: 12B_M_1735


title: 12B_M_1736


title: 11J_M_1024


title: 12B_M_1737


title: 11J_M_1025


title: 11J_M_1023


title: 12B_M_1733


title: 12B_M_1732


title: 11J_M_1022


title: 12B_M_1731


title: 11J_M_1021


title: 11J_M_1020


title: 11J_M_1034


title: 12B_M_1729


title: 11J_M_1019


title: 12B_M_1728


title: 12B_M_1727


title: 12B_M_1726


title: 11J_M_1017


title: 12B_M_1725


title: 11J_M_1016


title: 11J_M_1015


title: 11J_M_1014


title: 11J_M_1013


title: 12B_M_1722


title: 12B_M_1723


title: 12B_M_1721


title: 12B_M_1719


title: 12B_M_1720


title: 11J_M_1012


title: 11J_M_1011


title: 11J_M_1010


title: 11J_M_1009


title: 12B_M_1717


title: 11J_M_1008


title: 12B_M_1714


title: 12B_M_1716


title: 12B_M_1715


title: 11J_M_1006


title: 11J_M_1007


title: 12B_M_1730


title: 12B_M_1712


title: 11J_M_1005


title: 11J_M_1004


title: 11J_M_1018


title: 12B_M_1711


title: 11J_M_1002


title: 11J_M_1001


title: 11J_M_1003


title: 12B_M_1710


title: 12B_M_1709


title: 12B_M_1708


title: 11J_M_1000


title: 11J_M_997


title: 12B_M_1706


title: 11J_M_995


title: 12B_M_1707


title: 12B_M_1718


title: 12B_M_1704


title: 11J_M_994


title: 12B_M_1705


title: 12B_M_1703


title: 11J_M_993


title: 12B_M_1713


title: 12B_M_1702


title: 11J_M_992


title: 12B_M_1701


title: 11J_M_991


title: 12B_M_1699


title: 11J_M_990


title: 12B_M_1700


title: 11J_M_999


title: 11J_M_989


title: 11J_M_988


title: 12B_M_1697


title: 12B_M_1698


title: 12B_M_1696


title: 11J_M_986


title: 12B_M_1694


title: 11J_M_985


title: 11J_M_998


title: 11J_M_984


title: 11J_M_996


title: 12B_M_1693


title: 12B_M_1692


title: 12B_M_1691


title: 72h

city: Leiden

first: Stefan

last: Semrau

address: Einsteinweg 55

department: Physics

country: Netherlands

institute: Leiden University

library_source: transcriptomic

data_processing:
Sequenced reads were trimmed for adaptor sequence and low-quality sequence.
Trimmed reads were aligned to the transcriptome of mm10 with RSEM v1.2.28 and bowtie2 v2.2.6 with the options ‘--sampling-for-bam’ and ‘--fragment-length-mean 40’.
To obtain unique counts for the CDS and 3’UTR of genes the BAM files were overlapped with the CDS and 3’UTR regions of mm10 using in the GenomicFeatures package in R
Genome_build: mm10
Supplementary_files_format_and_content: The *.genes.results files are plain-text output files from RSEM and contain TPM and expected_count. CDS_3UTR_counts.txt contains a matrix of unique read counts of the CDS and 3'UTR in the samples.

molecule: total RNA

growth_protocol: E14 mouse embryonic stem cells were grown in modified 2i medium: DMEM/F12 (Life technologies) supplemented with 0.5x N2 supplement, 0.5x B27 supplement, 4mM L- glutamine (Gibco), 20 μg/ml human insulin (Sigma-Aldrich), 1x 100U/ml penicillin/streptomycin (Gibco), 1x MEM Non-Essential Amino Acids (Gibco), 7 μl 2-Mercaptoethanol (Sigma-Aldrich), 1 μM MEK inhibitor (PD0325901,Stemgent), 3 μM GSK3 inhibitor (CHIR99021, Stemgent), 1000 U/ml mouse LIF (ESGRO). Cells were passaged every other day with Accutase (Life technologies) and replated on gelatin coated tissue culture plates (Cellstar, Greiner bio-one).

extract_protocol:
Cells were dissociated with accutase. In addition, the ECT and XEN samples were sorted with fluorescence activated cell sorting (CD24+/PDGFRA- and CD24-/PDGFRA+ resp.). RNA was extracted from the samples (RNeasy, Qiagen) and the purified RNA was stored at -80C until RNA-sequencing was performed.
The libraries for were prepared under the standard conditions using Illumina’s TruSeq stranded mRNA sample preparation kit. The libraries were sequenced using Illumina HiSeq 3000; 40 basepair long, stranded single-end reads were sequenced at an average read depth of 40 million reads per sample.

treatment_protocol: E14 cells were treated with Retinoic acid to induce differentiation. Prior to differentiation cells were grown in 2i medium for at least 2 passages. Cells were seeded at 2.5 × 105 per 10 cm dish and grown over night (12 h). Cells were then washed twice with PBS and basal N2B27 medium (2i medium without the inhibitors, LIF and the additional insulin) supplemented with 0.25 μM all-trans retinoic acid (RA, Sigma-Aldrich). Spent medium was exchanged with fresh medium after 48 h.

tag: treatment

value: 72 hours retinoic acid + N2B27

tag: facs

value: Not sorted


title: 96h-rep2

value: 96 hours retinoic acid + N2B27


title: ECT


title: XEN


title: 96h-rep1


title: 48h

value: 48 hours retinoic acid + N2B27


title: 11J_M_982


title: 12B_M_1690


title: 24h

value: 24 hours retinoic acid + N2B27


title: 12B_M_1689


title: 36h

value: 36 hours retinoic acid + N2B27


title: 11J_M_980


title: 06h

value: 6 hours retinoic acid + N2B27


title: 11J_M_987


title: 0h-rep2


title: 12B_M_1688


title: 0h-rep1


title: 11J_M_978


title: 11J_M_979


title: 12B_M_1686


title: 11J_M_983


title: 26_VTA_SS [V-281]

city: New York

first: Molly

middle: S

last: Estill

state: NY

address: 1 Gustave L. Levy Place

department: Neuroscience

institute: Mount Sinai School of Medicine

description:
deseq2_VTA_cpm.csv
CountsMatrix.csv
DEGlists.xlsx

data_processing:
Quality control on raw reads was performed using FastQC.Sequencing reads underwent adapter trimming and were mapped to mm10 using HISAT2. Duplicates were removed using samtools rmdup. Counts of reads mapping to genes were obtained using htseq-count against Ensembl v90 annotation.
Assembly: mm10
Supplementary files format and content: CountsMatrix: A comma delimited text file containing the raw read counts for all genes. Columns represent samples and rows represent the genes.  AnnotationFile: A comma delimited text file containing the basic metadata for all samples. CPM files: A comma delimited text file containing the normalized gene expression in counts per million(cpm). Individual files are provided for the different brain regions. DEGlist: An excel file containing  the differential expression result tables for several comparisons.

source_name: Brain

extract_protocol:
RNA extracted using Qiagen RNEasy Micro
Illumina TruSeq Gold, strand-specific RNA-seq with rRNA depletion
2x150 bp sequencing, single index

tag: tissue

value: Brain

value: VTA

tag: mouse id

tag: genotype

value: Wild-type

tag: group

value: SS


title: 8_VTA_SS [V-262]


title: 28_VTA_SS [V-283]


title: 22_VTA_SS [V-277]


title: 32_VTA_SS [V-287]


title: 12B_M_1684


title: 11J_M_977


title: 11J_M_976


title: 6_VTA_SS [V-260]


title: 31_VTA_SS [V-286]


title: 12B_M_1683


title: 11J_M_975


title: 31_vHPC_SS [H-239]

description:
deseq2_vHPC_cpm.csv
CountsMatrix.csv
DEGlists.xlsx

value: vHPC


title: 11J_M_981


title: 15_VTA_SS [V-269]


title: 6_vHPC_SS [H-213]


title: 26_vHPC_SS [H-234]


title: 32_vHPC_SS [H-240]


title: 11J_M_974


title: 12B_M_1681


title: 28_vHPC_SS [H-236]


title: 12B_M_1687


title: 12B_M_1680


title: 15_vHPC_SS [H-222]


title: 22_vHPC_SS [H-230]


title: 11J_M_973


title: 26_PFC_SS [P-27]

description:
deseq2_PFC_cpm.csv
CountsMatrix.csv
DEGlists.xlsx

value: PFC


title: 8_vHPC_SS [H-215]


title: 12B_M_1679


title: 11J_M_972


title: 12B_M_1678


title: 11J_M_971


title: 8_PFC_SS [P-8]


title: 11J_M_970


title: 12B_M_1677


title: 11J_M_969


title: 11J_M_968


title: 15_PFC_SS [P-15]


title: 31_PFC_SS [P-32]


title: 32_PFC_SS [P-33]


title: 12B_M_1682


title: 22_PFC_SS [P-23]


title: 32_NAc_SS [N-85]

description:
deseq2_NAc_cpm.csv
CountsMatrix.csv
DEGlists.xlsx

value: NAc


title: 12B_M_1675


title: 11J_M_967


title: 12B_M_1674


title: 22_NAc_SS [N-75]


title: 11J_M_966


title: 6_NAc_SS [N-58]


title: 12B_M_1673


title: 11J_M_965


title: 8_NAc_SS [N-60]


title: 12B_M_1672


title: 28_NAc_SS [N-81]


title: 6_PFC_SS [P-6]


title: 31_NAc_SS [N-84]


title: 12B_M_1671


title: 26_NAc_SS [N-79]


title: 12B_M_1670


title: 11J_M_964


title: 11J_M_963


title: 11J_M_962


title: 28_PFC_SS [P-29]


title: 12B_M_1676


title: 26_dStri_SS [S-131]

description:
deseq2_dStri_cpm.csv
CountsMatrix.csv
DEGlists.xlsx

value: dStri


title: 11J_M_961


title: 32_dStri_SS [S-137]


title: 8_dStri_SS [S-112]


title: 31_dStri_SS [S-136]


title: 22_dStri_SS [S-127]


title: 6_dStri_SS [S-110]


title: 11J_M_960


title: 11J_M_767


title: 12B_M_1668


title: 12B_M_1667


title: 22_BLA_SS [2-30]

description:
deseq2_BLA_cpm.csv
CountsMatrix.csv
DEGlists.xlsx

value: BLA


title: 11J_M_766


title: 26_BLA_SS [2-34]


title: 15_NAc_SS [N-67]


title: 8_BLA_SS [1-8]


title: 15_BLA_SS [1-18]


title: 11J_M_765


title: 12B_M_1666


title: 6_BLA_SS [1-6]


title: 15_dStri_SS [S-119]


title: 12B_M_1665


title: 11J_M_764


title: 12B_M_1664


title: 32_BLA_SS [2-43]


title: 11J_M_763


title: 28_BLA_SS [2-39]


title: 28_dStri_SS [S-133]


title: 12B_M_1669


title: 12B_M_1663


title: 10_VTA_SH [V-264]

value: SH


title: 31_BLA_SS [2-42]


title: 17_VTA_SH [V-271]


title: 11J_M_762


title: 24_VTA_SH [V-279]


title: 11J_M_761


title: 12B_M_1661


title: 30_VTA_SH [V-285]


title: 27_VTA_SH [V-282]


title: 11J_M_760


title: 4_VTA_SH [V-258]


title: 12B_M_1660


title: 12B_M_1659


title: 29_vHPC_SH [H-237]


title: 24_vHPC_SH [H-232]


title: 12B_M_1658


title: 11J_M_758


title: 11J_M_759


title: 27_vHPC_SH [H-235]


title: 30_vHPC_SH [H-238]


title: 17_vHPC_SH [H-224]


title: 4_vHPC_SH [H-211]


title: 10_vHPC_SH [H-217]


title: 12B_M_1656


title: 11J_M_756


title: 11J_M_757


title: 11J_M_755


title: 12B_M_1655


title: 29_PFC_SH [P-30]


title: 19_vHPC_SH [H-226]


title: 12B_M_1662


title: 4_PFC_SH [P-4]


title: 12B_M_1654


title: 24_PFC_SH [P-25]


title: 11J_M_753


title: 19_VTA_SH [V-273]


title: 12B_M_1653


title: 19_PFC_SH [P-19]


title: 11J_M_752


title: 29_VTA_SH [V-284]


title: 10_PFC_SH [P-10]


title: 11J_M_751


title: 30_PFC_SH [P-31]


title: 4_NAc_SH [N-56]


title: 12B_M_1650


title: 17_PFC_SH [P-17]


title: 12B_M_1657


title: 11J_M_750


title: 17_NAc_SH [N-69]


title: 24_NAc_SH [N-77]


title: 27_NAc_SH [N-80]


title: 11J_M_749


title: 12B_M_1648


title: 11J_M_748


title: 10_NAc_SH [N-62]


title: 12B_M_1647


title: 19_NAc_SH [N-71]


title: 11J_M_747


title: 30_NAc_SH [N-83]


title: 29_NAc_SH [N-82]


title: 11J_M_754


title: 27_PFC_SH [P-28]


title: 30_dStri_SH [S-135]


title: 17_dStri_SH [S-121]


title: 11J_M_746


title: 12B_M_1645


title: 19_dStri_SH [S-123]


title: 11J_M_745


title: 12B_M_1652


title: 29_dStri_SH [S-134]


title: 24_dStri_SH [S-129]


title: 27_dStri_SH [S-132]


title: 4_dStri_SH [S-108]


title: 11J_M_744


title: 12B_M_1644


title: 12B_M_1642


title: 11J_M_743


title: 12B_M_1643


title: 17_BLA_SH [1-22]


title: 11J_M_742


title: 12B_M_1649


title: 12B_M_1641


title: 29_BLA_SH [2-40]


title: 4_BLA_SH [1-4]


title: 12B_M_1640


title: 19_BLA_SH [1-24]


title: 11J_M_740


title: 11J_M_741


title: 30_BLA_SH [2-41]


title: 24_BLA_SH [2-32]


title: 12B_M_1638


title: 11J_M_739


title: 12B_M_1646


title: 10_BLA_SH [1-10]


title: 27_BLA_SH [2-36]


title: 12B_M_1637


title: 46_VTA_S24 [V-300]


title: 41_VTA_S24 [V-296]


title: 11J_M_738


title: 37_VTA_S24 [V-292]


title: 12B_M_1636


title: 11J_M_737


title: 12B_M_1635


title: 50_VTA_S24 [V-304]


title: 11J_M_736


title: 10_dStri_SH [S-114]


title: 34_VTA_S24 [V-289]


title: 12B_M_1634


title: 44_VTA_S24 [V-306]


title: 49_VTA_S24 [V-303]


title: 11J_M_735


title: 46_vHPC_S24 [H-254]


title: 12B_M_1633


title: 11J_M_734


title: 41_vHPC_S24 [H-249]


title: 50_vHPC_S24 [H-258]


title: 37_vHPC_S24 [H-245]


title: 12B_M_1632


title: 34_vHPC_S24 [H-242]


title: 11J_M_733


title: 12B_M_1631


title: 11J_M_732


title: 44_vHPC_S24 [H-252]


title: 12B_M_1630


title: 49_vHPC_S24 [H-257]


title: 11J_M_731


title: 46_PFC_S24 [P-47]


title: 35_vHPC_S24 [H-243]


title: 37_PFC_S24 [P-38]


title: 11J_M_730


title: 12B_M_1629


title: 11J_M_729


title: 35_PFC_S24 [P-36]


title: 12B_M_1628


title: 35_VTA_S24 [V-290]


title: 44_PFC_S24 [P-45]


title: 12B_M_1626


title: 41_PFC_S24 [P-42]


title: 37_NAc_S24 [N-90]


title: 34_PFC_S24 [P-35]


title: 11J_M_728


title: 12B_M_1625


title: 35_NAc_S24 [N-88]


title: 11J_M_726


title: 11J_M_727


title: 49_NAc_S24 [N-102]


title: 50_NAc_S24 [N-103]


title: 12B_M_1624


title: 34_NAc_S24 [N-87]


title: 12B_M_1622


title: 12B_M_1623


title: 11J_M_725


title: 11J_M_724


title: 44_NAc_S24 [N-97]


title: 41_NAc_S24 [N-94]


title: 11J_M_723


title: 12B_M_1621


title: 35_dStri_S24 [S-140]


title: 11J_M_722


title: 12B_M_1620


title: 34_dStri_S24 [S-139]


title: 49_dStri_S24 [S-154]


title: 11J_M_721


title: 12B_M_1619


title: 37_dStri_S24 [S-142]


title: 50_dStri_S24 [S-155]


title: 50_PFC_S24 [P-51]


title: 44_dStri_S24 [S-149]


title: 12B_M_1618


title: 41_dStri_S24 [S-146]


title: 46_dStri_S24 [S-151]


title: 49_PFC_S24 [P-50]


title: 46_BLA_S24 [3-18]


title: 12B_M_1617


title: 11J_M_718


title: 34_BLA_S24 [3-3]


title: 35_BLA_S24 [3-4]


title: 11J_M_716


title: 12B_M_1616


title: 11J_M_717


title: 49_BLA_S24 [3-21]


title: 11J_M_715


title: 44_BLA_S24 [3-16]


title: 41_BLA_S24 [3-13]


title: 46_NAc_S24 [N-99]


title: 11J_M_714


title: 12B_M_1614


title: 12_VTA_HS [V-266]

value: HS


title: 11J_M_713


title: 2_VTA_HS [V-256]


title: 3_VTA_HS [V-257]


title: 11_VTA_HS [V-265]


title: 11J_M_720


title: 14_VTA_HS [V-268]


title: 11J_M_712


title: 12B_M_1611


title: 11J_M_711


title: 11J_M_719


title: 13_VTA_HS [V-267]


title: 20_VTA_HS [V-274]


title: 23_VTA_HS [V-278]


title: 3_vHPC_HS [H-210]


title: 12B_M_1608


title: 11J_M_710


title: 12_vHPC_HS [H-219]


title: 12B_M_1609


title: 13_vHPC_HS [H-220]


title: 23_vHPC_HS [H-231]


title: 11J_M_708


title: 12B_M_1607


title: 12B_M_1606


title: 20_vHPC_HS [H-227]


title: 11_vHPC_HS [H-218]


title: 12B_M_1615


title: 50_BLA_S24 [3-23]


title: 11J_M_707


title: 14_vHPC_HS [H-221]


title: 2_vHPC_HS [H-209]


title: 20_PFC_HS [P-20]


title: 3_PFC_HS [P-3]


title: 13_PFC_HS [P-13]


title: 12B_M_1604


title: 12_PFC_HS [P-12]


title: 11J_M_705


title: 11J_M_706


title: 12B_M_1603


title: 14_PFC_HS [P-14]


title: 11J_M_704


title: 12B_M_1610


title: 12B_M_1602


title: 11J_M_703


title: 12B_M_1613


title: 11J_M_709


title: 11_PFC_HS [P-11]


title: 23_PFC_HS [P-24]


title: 2_PFC_HS [P-2]


title: 12B_M_1601


title: 3_NAc_HS [N-55]


title: 11J_M_702


title: 12B_M_1600


title: 14_NAc_HS [N-66]


title: 13_NAc_HS [N-65]


title: 12B_M_1599


title: 12_NAc_HS [N-64]


title: 11J_M_700


title: 11J_M_701


title: 2_NAc_HS [N-54]


title: 12B_M_1605


title: 12B_M_1598


title: 20_NAc_HS [N-72]


title: 11J_M_699


title: 11J_M_698


title: 11_NAc_HS [N-63]


title: 20_dStri_HS [S-124]


title: 12B_M_1596


title: 12B_M_1597


title: 3_dStri_HS [S-107]


title: 12B_M_1595


title: 23_dStri_HS [S-128]


title: 13_dStri_HS [S-117]


title: 11J_M_697


title: 11J_M_696


title: 11J_M_695


title: 12B_M_1594


title: 3_BLA_HS [1-3]


title: 14_dStri_HS [S-118]


title: 2_BLA_HS [1-2]


title: 12B_M_1593


title: 12B_M_1592


title: 14_BLA_HS [1-15]


title: 11J_M_693


title: 11_BLA_HS [1-11]


title: 11J_M_692


title: 13_BLA_HS [1-14]


title: 12B_M_1590


title: 12B_M_1591


title: 23_NAc_HS [N-76]


title: 12_BLA_HS [1-13]


title: 23_BLA_HS [2-31]


title: 20_BLA_HS [2-25]


title: 11J_M_691


title: 11J_M_690


title: 11_dStri_HS [S-115]


title: 12B_M_1589


title: 1_VTA_HH [V-255]

value: HH


title: 2_dStri_HS [S-106]


title: 11J_M_694


title: 18_VTA_HH [V-272]


title: 11J_M_688


title: 11J_M_689


title: 12B_M_1588


title: 12_dStri_HS [S-116]


title: 16_VTA_HH [V-270]


title: 7_VTA_HH [V-261]


title: 12B_M_1586


title: 12B_M_1585


title: 11J_M_687


title: 21_VTA_HH [V-276]


title: 5_vHPC_HH [H-212]


title: 1_vHPC_HH [H-208]


title: 11J_M_686


title: 9_VTA_HH [V-263]


title: 18_vHPC_HH [H-225]


title: 12B_M_1584


title: 11J_M_685


title: 11J_M_684


title: 12B_M_1583


title: 16_vHPC_HH [H-223]


title: 12B_M_1582


title: 21_vHPC_HH [H-229]


title: 7_vHPC_HH [H-214]


title: 9_vHPC_HH [H-216]


title: 25_vHPC_HH [H-233]


title: 25_VTA_HH [V-280]


title: 11J_M_681


title: 5_VTA_HH [V-259]


title: 11J_M_683


title: 12B_M_1580


title: 11J_M_682


title: 7_PFC_HH [P-7]


title: 1_PFC_HH [P-1]


title: 12B_M_1587


title: 5_PFC_HH [P-5]


title: 12B_M_1579


title: 11J_M_680


title: 12B_M_1581


title: 18_PFC_HH [P-18]


title: 25_PFC_HH [P-26]


title: 21_PFC_HH [P-22]


title: 12B_M_1578


title: 16_NAc_HH [N-68]


title: 16_PFC_HH [P-16]


title: 12B_M_1577


title: 11J_M_678


title: 11J_M_679


title: 12B_M_1576


title: 21_NAc_HH [N-74]


title: 18_NAc_HH [N-70]


title: 1_NAc_HH [N-53]


title: 12B_M_1575


title: 11J_M_675


title: 9_PFC_HH [P-9]


title: 25_NAc_HH [N-78]


title: 5_NAc_HH [N-57]


title: 12B_M_1574


title: 9_NAc_HH [N-61]


title: 11J_M_674


title: 12B_M_1573


title: 7_dStri_HH [S-111]


title: 11J_M_673


title: 12B_M_1572


title: 9_dStri_HH [S-113]


title: 11J_M_672


title: 21_dStri_HH [S-126]


title: 16_dStri_HH [S-120]


title: 12B_M_1571


title: 18_dStri_HH [S-122]


title: 1_dStri_HH [S-105]


title: 12B_M_1569


title: 11J_M_671


title: 25_dStri_HH [S-130]


title: 11J_M_677


title: 7_NAc_HH [N-59]


title: 5_BLA_HH [1-5]


title: 12B_M_1568


title: 7_BLA_HH [1-7]


title: 16_BLA_HH [1-19]


title: 9_BLA_HH [1-9]


title: 12B_M_1567


title: 11J_M_668


title: 11J_M_669


title: 18_BLA_HH [1-23]


title: 11J_M_676


title: 25_BLA_HH [2-33]


title: 12B_M_1566


title: 11J_M_667


title: 21_BLA_HH [2-29]


title: 1_BLA_HH [1-1]


title: 5_dStri_HH [S-109]


title: 12B_M_1565


title: 11J_M_666


title: 43_VTA_H24 [V-298]


title: 11J_M_665


title: 38_VTA_H24 [V-293]


title: 40_VTA_H24 [V-295]


title: 12B_M_1563


title: 12B_M_1570


title: 11J_M_664


title: 47_VTA_H24 [V-301]


title: 42_VTA_H24 [V-297]


title: 36_VTA_H24 [V-291]


title: 11J_M_663


title: 12B_M_1560


title: 11J_M_662


title: 12B_M_1561


title: 11J_M_670


title: 11J_M_660


title: 12B_M_1562


title: 36_vHPC_H24 [H-244]


title: 48_VTA_H24 [V-302]


title: 12B_M_1558


title: 43_vHPC_H24 [H-251]


title: 12B_M_1559


title: 12B_M_1557


title: 33_VTA_H24 [V-288]


title: 47_vHPC_H24 [H-255]


title: 45_VTA_H24 [V-299]


title: 42_vHPC_H24 [H-250]


title: 12B_M_1556


title: 45_vHPC_H24 [H-253]


title: 11J_M_659


title: 48_vHPC_H24 [H-256]


title: 51_VTA_H24 [V-305]


title: 12B_M_1564


title: 40_vHPC_H24 [H-248]


title: 11J_M_658


title: 12B_M_1555


title: 33_vHPC_H24 [H-241]


title: 38_vHPC_H24 [H-246]


title: 11J_M_657


title: 51_vHPC_H24 [H-259]


title: 39_VTA_H24 [V-294]


title: 11J_M_661


title: 39_vHPC_H24 [H-247]


title: 12B_M_1554


title: 43_PFC_H24 [P-44]


title: 11J_M_656


title: 45_PFC_H24 [P-46]


title: 12B_M_1552


title: 12B_M_1553


title: 36_PFC_H24 [P-37]


title: 39_PFC_H24 [P-40]