title: Scml2-KO_F1_blastocyst_RNA_rep1-3

city: Shinjuku-ku

first: Akihiko

last: Sakashita

state: Tokyo

address: 35 Shinanomachi

department: Department of Molecular Biology,

country: Japan

institute: Keio University School of Medicine

description: Sired by ICSI with Scml2-KO sperm

data_processing:
Basecalls performed using bcl2fastq version 2.20.0.
Raw paired-end RNA-seq reads were filtered by TrimGalore with defalt setting and aligned to indexed mouse genome (GRCm38/mm10) using STAR aligner (version 2.5.3a). with following options, --twopassMode Basic; --outSAMtype BAM SortedByCoordinate; --outFilterType BySJout; --outFilterMultimapNmax 1; --winAnchorMultimapNmax 1; --alignSJoverhangMin 8; --alignSJDBoverhangMin 1; --outFilterMismatchNmax 1; --outFilterMismatchNoverReadLmax 0; --alignIntronMin 20; --alignIntronMax 1000000; --alignMatesGapMax 1000000 for unique alignments.
Aligned RNA-seq output file (.bam) was input to the featureCounts function, a part of the Subread package, to quantify uniquely aligned reads on respective annotated transcript loci (NCBI RefSeq transcripts). Read count output file (.txt) was input to the DESeq2 package version 1.16.1, to detect differentially expressed genes between two biological samples.
To visualize the enrichment of RNA-seq reads over representative genomic loci, bigWig files (.bw) were created from sorted BAM files using the bamCoverage function as implemented in deepTools (version 3.1.3). Figures for continuous tag counts over selected genomic intervals were created in the IGV browser (Broad Institute).
mm10
Supplementary files format and content: Track format data (.bw)

growth_protocol: Mice were maintained and fed ad libitum with a standard diet and water in a temperature- and light-controlled room (23℃±3℃, 12 light/12 dark cycle), according to the guidelines of the Institutional Animal Care and Use Committee at Cincinnati Children’s Hospital Medical Center and Yamanashi University, and fed ad libitum with standard diet and water.

extract_protocol:
Acidic Tyrode’s solution (Sigma) containing 0.5% PVP and 50 mM NaCl was used to remove the zona pellucida (ZP) from embryos before sample collection.
Preparation of total RNA-seq libraries of pooled 2-cell and single XY blastocyst embryos was performed using SMART-Seq Stranded Kit (Clontech), according to the manufacturers’ instructions. In short, pooled 30 each of ZP-free 2-cells per replicate and each single blastocyst in ICSI-derived Ctrl-F1 and Scml2-KO-F1 embryos, were lysed in 1x Lysis Buffer containing RNase inhibitor (0.2 IU/µl, from SMART-Seq Stranded Kit, Clontech), directly. RNAs were randomly sheared by heating at 85℃ for 6 min and supplied to reverse transcription with random hexamers and PCR amplification. Ribosomal fragments were depleted from each cDNA sample with scZapR and scR-Probes. Indexed total RNA-seq libraries were enriched by second PCR amplification.

treatment_protocol: C57BL/6N female mice were superovulated by intraperitoneal administrations of 7.5 IU of equine chorionic gonadotropin (Asuka Pharmaceutical Co.) followed 48 hrs. later with 7.5 IU of human chorionic gonadotropin (hCG, Asuka Pharmaceutical Co.). After injection of hCG, cumulus cells and oocyte complexes were obtained from oviducts of superovulated females and treated with hyaluronidase for 10 min at RT so that the oocytes were retrieved. The cryopreserved Ctrl and Scml2-KO testicular cell pellets were washed twice with D-MEM supplemented with 10% fetal bovine serum. After washing, the testicular cell pellet was transferred to 10% PVP containing HEPES-buffered CZB-medium. Under the inverted microscope, zona pellucida and cytosolic membrane were disrupted with a piezo drive micromanipulator (Prime Tech Ltd., Ibaraki, Japan), and then the heads of testicular spermatozoa were injected into the cytoplasm of oocytes. ICSI embryos were cultured in HEPES-buffered CZB medium at 37℃ with 5% CO2.

tag: age of weeks

value: Day 4 after ICSI insemination

value: WT

tag: backgtound strain


title: Ctrl_F1_blastocyst_RNA_rep1-4

status: Public on May 06 2023

type: SRA

description: Sired by ICSI with Ctrl sperm

library_source: transcriptomic

molecule: total RNA

organism: Mus musculus

tag: genotype


title: Ctrl_F1_blastocyst_RNA_rep1-1

description: Sired by ICSI with Ctrl sperm


title: Scml2-KO_F1_2-cell_embryos_RNA_rep2

description: Sired by ICSI with Scml2-KO sperm

value: Day 1 after ICSI insemination

value: Pool of WT (Scml2+/y, XY (male)) and Scml2 heterozygous mutant (Scml2+/-, XX (female)) embryos


title: Ctrl_F1_blastocyst_RNA_rep2-7

description: Sired by ICSI with Ctrl sperm


title: Ctrl_F1_2-cell_embryos_RNA_rep2

description: Sired by ICSI with Ctrl sperm


title: Scml2-KO_F1_2-cell_embryos_RNA_rep1

description: Sired by ICSI with Scml2-KO sperm


title: Ctrl_F1_2-cell_embryos_RNA_rep1

description: Sired by ICSI with Ctrl sperm


title: Scml2-KO_F1_blastocyst_RNA_rep2-3

description: Sired by ICSI with Scml2-KO sperm


title: Scml2-KO_F1_blastocyst_RNA_rep1-1

description: Sired by ICSI with Scml2-KO sperm


title: Ctrl_F1_blastocyst_RNA_rep2-10

description: Sired by ICSI with Ctrl sperm


title: Ctrl_Testicular_H3K4me3_rep1

library_source: genomic

data_processing:
Basecalls performed using bcl2fastq version 2.20.0.
ChIP-seq  reads were aligned to the mm10 genome using the bowtie2 version version 2.4.4
Alignment output file (.bam) was proceeded to the conversion into track format (.bw) files by BamCoverage function of the deepTools.
mm10
Supplementary files format and content: Track format data (.bw)

molecule: genomic DNA

growth_protocol: Mice were maintained and fed ad libitum with standard diet and water in a temperature- and light-controlled room (23℃±3℃, 12 light/12 dark cycle), according to the guidelines of the Institutional Animal Care and Use Committee at Cincinnati Children’s Hospital Medical Center and Yamanashi University, and fed ad libitum with standard diet and water

extract_protocol:
For ChIP-seq analysis, sperm chromatin was treated with DTT. After solubilization, DTT-treated chromatin was digested with MNase and pulled-down with anti-H3K27me3 or anti-H3K4me3 antibody.
ChIP-seq library preparation was carried out using a NEBNext Ultra II DNA Library Prep Kit (New England Biolabs) following the manufacturer’s instructions.

tag: tissue/cell type

value: sperm

tag: age

value: 10 weeks

tag: background strain

tag: chip antibody


title: Ctrl_Testicular_input_rep1

value: none (input)


title: Ctrl_Testicular_H3K27me3_rep2


title: Ctrl_Epididymal_input_rep2


title: Ctrl_Epididymal_H3K4me3_rep2


title: Ctrl_Testicular_input_rep2


title: Scml2-KO_F1_blastocyst_RNA_rep2-4

description: Sired by ICSI with Scml2-KO sperm


title: Ctrl_Epididymal_H3K27me3_rep2


title: Ctrl_Epididymal_H3K27me3_rep1


title: Ctrl_Epididymal_H3K4me3_rep1


title: Scml2-KO_Testicular_H3K27me3_rep2


title: Scml2-KO_Testicular_H3K4me3_rep2


title: Ctrl_Epididymal_input_rep1


title: Ctrl_F1_blastocyst_RNA_rep1-6

description: Sired by ICSI with Ctrl sperm


title: Scml2-KO_Testicular_input_rep2


title: Scml2-KO_Testicular_input_rep1


title: Ctrl_Testicular_H3K4me3_rep2


title: Scml2-KO_Testicular_H3K27me3_rep1


title: Scml2-KO_Epididymal_input_rep1


title: Scml2-KO_Epididymal_H3K27me3_rep1


title: Scml2-KO_Epididymal_H3K27me3_rep2


title: Scml2-KO_Epididymal_input_rep2


title: Pool179_Plate8-5-I15-D21

city: La Jolla

first: Joseph

middle: R

last: Ecker

state: CA

address: 10010 North Torrey Pines Road

department: Genomic Analysis Laboratory

country: USA

institute: HHMI-Salk-Institute

data_processing:
Reads trimed with Cutadapt for adapters and low quality bases (Phred score >= 20)
The resulting files are mapped to in-silico bisulfite converted reference genome using Bismark.
The raw BAM file will be filtered using samtools to filter reads by MAPQ > 10 and use Picard to remove PCR duplicates
Tab-delimited files (ALLC files) describing the quantity of unmethylated and methylated cytosine base calls will be generated with in-house developing package using the filtered BAM files
Assembly: mm10
Supplementary files format and content: tab-delimited files (ALLC files) describing the quantity of unmethylated and methylated cytosine base calls. Columns are: 1. Chromosome, 2. Position, 3. Strand, 4. Cytosin Context, 5. methylated base call, 6. total mapped base call, 7. not used, place holder column
Library strategy: snmC-seq2 & 3

source_name: brain

growth_protocol: All experimental procedures using live animals were approved by the Salk Institute Animal Care and Use Committee. The knock-in mouse line, R26R-CAG-loxp-stop-loxp-Sun1-sfGFP-Myc (INTACT) was used for most experiments4 and they were maintained on a C57BL/6J background. 42-49 day old adult male and female INTACT mice were used for the retrograde labeling experiment.

extract_protocol:
Approximately two weeks after the AAVretro injection, brains were extracted from the 56-63 day old INTACT mice, immediately submerged in ice-cold slicing buffer (2.5mM KCl, 0.5mM CaCl2, 7mM MgCl2, 1.25mM NaH2PO4, 110mM sucrose, 10mM glucose and 25mM NaHCO3) that was bubbled with carbogen, and sliced into 0.6 mm coronal sections starting from the frontal pole. From each AAVretro-injected brain, the slices were kept in the ice-cold dissection buffer from which selected brain regions (Supplementary Table 1) were manually dissected under a fluorescent dissecting microscope (Olympus SZX16), following the Allen Mouse Common Coordinate Framework (CCF), Reference Atlas, Version 3 (2015) (Extended Data Fig. 1). The dissected brain tissues were transferred to prelabeled microcentrifuge tubes, immediately frozen in dry ice, and subsequently stored at -80oC.   For each dissected brain region, samples from 2 males and 2 females were pooled separately as biological replicates for nuclei preparation. The 2-mL glass tissue dounce homogenizer and pestles (Sigma-Aldrich D8938-1SET) were pre-chilled on ice. Nuclei were prepared using a modified protocol as reported by Lacar et al., 201622. In summary, the frozen brain tissues were transferred to the dounce homogenizer with 1 mL ice-cold NIM buffer (0.25M sucrose, 25mM KCl, 5mM MgCl2, 10mM Tris-HCl (pH7.4), 1mM DTT (Sigma 646563), 10μl of protease inhibitor (Sigma P8340)), with 0.1% Triton X-100 and 5μM Hoechst 33342 (Invitrogen H3570), and gently homogenized on ice with the pestle 10-15 times. The homogenate was transferred to pre-chilled microcentrifuge tubes and centrifuged at 1000 rcf for 8 min at 4oC to pellet the nuclei. The pellet was resuspended in 1 mL ice-cold NIM buffer, and again centrifuged at 1000 rcf for 8 min at 4oC. The pellet was then resuspended in 450 μL of ice-cold NSB buffer (0.25M sucrose, 5mM MgCl2, 10mM Tris-HCl (pH7.4), 1mM DTT, 9ul of Protease inhibitor), and filtered through 40μM cell strainer. The filtered nuclei suspension was incubated on ice for at least 30 minutes with 50μl of nuclease-free BSA for at least 10 minutes, then incubated with GFP antibody, Alexa Fluor 488 (Invitrogen, A-21311) and anti-NeuN antibody (EMD Millipore MAB377) conjugated with Alexa Fluor 647 (Invitrogen A20173). GFP+/NeuN+ single nuclei were isolated using fluorescence-activated nuclei sorting (FANS) on a BD Influx sorter with 100μm nozzle, and sorted into 384-well plates preloaded with 2μl of digestion buffer for snmC-seq (20 mL digestion buffer consists of 10 mL M-digestion buffer (2×, Zymo D5021-9), 1 ml Proteinase K (20 mg, Zymo D3001-2-20), 9 mL water, and 10 µL unmethylated lambda DNA (100 pg/µL, Promega, D1521)). The collected plates were incubated at 50oC for 20 minutes then stored at -20 oC.
The bisulfite conversion and library preparation were performed following the detailed snmC-seq2 protocol as previously described (Luo, C. et al., Nat. Commun. 2018, 9(1):3824.) or snmC-seq3 protocol described in (Liu, H. et al., Biorxiv. 2023:2023-04.). The libraries were sequenced on Illumina Novaseq 6000 using the S4 flow cell 2 x 150 bp mode.

treatment_protocol: To label neurons projecting to regions of interest, injections of rAAV2-retro-Cre (produced by Salk Vector Core or Vigene, 2x1012 to 1x1013 viral genomes/ml, produced with capsid from Addgene plasmid #81070 packaging pAAV-EF1a-Cre from Addgene plasmid #55636) were made into both hemispheres of the INTACT mice. Animals were anesthetized with either ketamine/xylazine or isoflurane, placed in a stereotaxic frame, and 0.1 to 0.5 microliters of AAV was injected by pressure into stereotaxic coordinates corresponding to the desired projection target.

tag: tissue

value: brain

tag: source

value: AON

tag: target

value: PFC

tag: Sex

value: female


title: Pool179_Plate8-5-I15-D9

value: MOB

value: male


title: Ctrl_Testicular_H3K27me3_rep1


title: Scml2-KO_Epididymal_H3K4me3_rep1


title: Pool179_Plate8-5-I15-D10


title: Pool179_Plate8-5-I15-C9


title: Scml2-KO_Epididymal_H3K4me3_rep2


title: Pool179_Plate8-5-I15-C10


title: Pool179_Plate8-5-I15-B21


title: Pool179_Plate8-5-I15-C21


title: Pool179_Plate8-5-I15-A9


title: Pool179_Plate8-5-I15-A10


title: Pool179_Plate8-4-I15-N8


title: Pool179_Plate8-5-I15-B10


title: Pool179_Plate8-4-I15-P20


title: Scml2-KO_Testicular_H3K4me3_rep1


title: Pool179_Plate8-5-I15-A21


title: Pool179_Plate8-4-I15-O8


title: Pool179_Plate8-4-I15-P7


title: Pool179_Plate8-4-I15-O7


title: Pool179_Plate8-4-I15-N7


title: Pool179_Plate8-4-I15-M8


title: Pool179_Plate8-4-I15-M19


title: Pool179_Plate8-4-I15-L20


title: Pool179_Plate8-4-I15-L8


title: Pool179_Plate8-4-I15-M20


title: Pool179_Plate8-4-I15-K8


title: Pool179_Plate8-4-I15-L7


title: Pool179_Plate8-4-I15-K7


title: Pool179_Plate8-4-I15-L19


title: Pool179_Plate8-4-I15-P8


title: Pool179_Plate8-4-I15-J8


title: Pool179_Plate8-4-I15-J20


title: Pool179_Plate8-4-I15-J19


title: Pool179_Plate8-4-I15-I8


title: Pool179_Plate8-4-I15-I7


title: Pool179_Plate8-4-I15-I20


title: Pool179_Plate8-4-I15-N20


title: Pool179_Plate8-4-I15-I19


title: Pool179_Plate8-4-I15-N19


title: Pool179_Plate8-4-I15-H7


title: Pool179_Plate8-4-I15-H8


title: Pool179_Plate8-4-I15-K20


title: Pool179_Plate8-4-I15-H19


title: Pool179_Plate8-4-I15-K19


title: Pool179_Plate8-4-I15-H20


title: Pool179_Plate8-4-I15-F7


title: Pool179_Plate8-4-I15-G7


title: Pool179_Plate8-4-I15-F8


title: Pool179_Plate8-4-I15-G19


title: Pool179_Plate8-4-I15-F20


title: Pool179_Plate8-4-I15-G20


title: Pool179_Plate8-4-I15-E8


title: Pool179_Plate8-4-I15-E7


title: Pool179_Plate8-4-I15-D8


title: Pool179_Plate8-4-I15-F19


title: Pool179_Plate8-4-I15-D19


title: Pool179_Plate8-4-I15-C7


title: Pool179_Plate8-4-I15-D7


title: Pool179_Plate8-4-I15-C20


title: Pool179_Plate8-4-I15-D20


title: Pool179_Plate8-4-I15-E20


title: Pool179_Plate8-4-I15-B8


title: Pool179_Plate8-4-I15-B19


title: Pool179_Plate8-4-I15-A8


title: Pool179_Plate8-4-I15-B20


title: Pool179_Plate8-4-I15-A7


title: Pool179_Plate8-4-I15-A20


title: Pool179_Plate8-4-I15-A19


title: Pool179_Plate8-3-I15-P17


title: Pool179_Plate8-3-I15-P5


title: Pool179_Plate8-3-I15-P6


title: Pool179_Plate8-3-I15-N6


title: Pool179_Plate8-3-I15-N17


title: Pool179_Plate8-3-I15-O18


title: Pool179_Plate8-3-I15-K18


title: Pool179_Plate8-3-I15-N18


title: Pool179_Plate8-3-I15-L17


title: Pool179_Plate8-3-I15-L6


title: Pool179_Plate8-3-I15-J17


title: Pool179_Plate8-3-I15-J5


title: Pool179_Plate8-3-I15-K17


title: Pool179_Plate8-3-I15-O6


title: Pool179_Plate8-3-I15-K5


title: Pool179_Plate8-3-I15-J18


title: Pool179_Plate8-3-I15-H6


title: Pool179_Plate8-3-I15-O17


title: Pool179_Plate8-3-I15-H18


title: Pool179_Plate8-3-I15-I5


title: Pool179_Plate8-3-I15-G6


title: Pool179_Plate8-3-I15-H5


title: Pool179_Plate8-3-I15-L18


title: Pool179_Plate8-3-I15-H17


title: Pool179_Plate8-3-I15-G5


title: Pool179_Plate8-3-I15-I6


title: Pool179_Plate8-3-I15-G17


title: Pool179_Plate8-3-I15-J6


title: Pool179_Plate8-3-I15-G18


title: Pool179_Plate8-3-I15-F6


title: Pool179_Plate8-3-I15-F5


title: Pool179_Plate8-3-I15-K6


title: Pool179_Plate8-3-I15-F18


title: Pool179_Plate8-3-I15-D5


title: Pool179_Plate8-3-I15-D17


title: Pool179_Plate8-3-I15-E17


title: Pool179_Plate8-3-I15-E6


title: Pool179_Plate8-3-I15-E5


title: Pool179_Plate8-3-I15-C6


title: Pool179_Plate8-3-I15-B5


title: Pool179_Plate8-3-I15-C17


title: Pool179_Plate8-2-I15-P4


title: Pool179_Plate8-3-I15-E18


title: Pool179_Plate8-3-I15-A17


title: Pool179_Plate8-2-I15-P15


title: Pool179_Plate8-2-I15-O3


title: Pool179_Plate8-2-I15-P16


title: Pool179_Plate8-2-I15-P3


title: Pool179_Plate8-2-I15-N3


title: Pool179_Plate8-2-I15-O16


title: Pool179_Plate8-2-I15-M3


title: Pool179_Plate8-2-I15-M16


title: Pool179_Plate8-2-I15-L3


title: Pool179_Plate8-2-I15-L4


title: Pool179_Plate8-2-I15-L16


title: Pool179_Plate8-2-I15-L15


title: Pool179_Plate8-2-I15-K4


title: Pool179_Plate8-2-I15-K16


title: Pool179_Plate8-2-I15-K15


title: Pool179_Plate8-3-I15-F17


title: Pool179_Plate8-3-I15-C5


title: Pool179_Plate8-2-I15-J3


title: Pool179_Plate8-2-I15-H3


title: Pool179_Plate8-2-I15-H4


title: Pool179_Plate8-2-I15-I15


title: Pool179_Plate8-2-I15-F16


title: Pool179_Plate8-2-I15-H15


title: Pool179_Plate8-2-I15-J16


title: Pool179_Plate8-2-I15-E3


title: Pool179_Plate8-2-I15-F15


title: Pool179_Plate8-2-I15-E16


title: Pool179_Plate8-2-I15-E4


title: Pool179_Plate8-2-I15-J4


title: Pool179_Plate8-2-I15-F4


title: Pool179_Plate8-2-I15-M4


title: Pool179_Plate8-2-I15-F3


title: Pool179_Plate8-2-I15-K3


title: Pool179_Plate8-2-I15-B4


title: Pool179_Plate8-2-I15-B16


title: Pool179_Plate8-2-I15-C4


title: Pool179_Plate8-2-I15-E15


title: Pool179_Plate8-1-I15-P2


title: Pool179_Plate8-1-I15-P1


title: Pool179_Plate8-1-I15-P14


title: Pool179_Plate8-1-I15-P13


title: Pool179_Plate8-1-I15-O13


title: Pool179_Plate8-1-I15-N2


title: Pool179_Plate8-2-I15-J15


title: Pool179_Plate8-2-I15-H16


title: Pool179_Plate8-2-I15-G16


title: Pool179_Plate8-1-I15-N14


title: Pool179_Plate8-1-I15-N13


title: Pool179_Plate8-1-I15-M2


title: Pool179_Plate8-2-I15-D4


title: Pool179_Plate8-1-I15-L14


title: Pool179_Plate8-1-I15-M13


title: Pool179_Plate8-1-I15-L2


title: Pool179_Plate8-1-I15-N1


title: Pool179_Plate8-1-I15-L1


title: Pool179_Plate8-1-I15-K1


title: Pool179_Plate8-1-I15-J2


title: Pool179_Plate8-1-I15-I2


title: Pool179_Plate8-1-I15-H1


title: Pool179_Plate8-1-I15-H2


title: Pool179_Plate8-1-I15-H13


title: Pool179_Plate8-1-I15-I14


title: Pool179_Plate8-1-I15-F13


title: Pool179_Plate8-1-I15-G13


title: Pool179_Plate8-1-I15-K2


title: Pool179_Plate8-1-I15-J1


title: Pool179_Plate8-1-I15-H14


title: Pool179_Plate8-1-I15-F1


title: Pool179_Plate8-1-I15-G2


title: Pool179_Plate8-1-I15-E14


title: Pool179_Plate8-1-I15-E2


title: Pool179_Plate8-1-I15-E13


title: Pool179_Plate8-1-I15-L13


title: Pool179_Plate8-1-I15-E1


title: Pool179_Plate8-1-I15-D1


title: Pool179_Plate8-1-I15-C2


title: Pool179_Plate8-1-I15-K14


title: Pool179_Plate8-1-I15-C14


title: Pool179_Plate8-1-I15-B2


title: Pool179_Plate8-1-I15-B1


title: Pool179_Plate8-1-I15-B13


title: Pool179_Plate8-1-I15-A14


title: Pool179_Plate8-1-I15-B14


title: Pool179_Plate8-1-I15-I1


title: Pool179_Plate8-1-I15-A1


title: Pool179_Plate7-6-A11-P12

value: RSP


title: Pool179_Plate7-6-A11-O11


title: Pool179_Plate7-6-A11-N24


title: Pool179_Plate7-6-A11-P23


title: Pool179_Plate7-6-A11-N23


title: Pool179_Plate7-6-A11-M24


title: Pool179_Plate7-6-A11-M12


title: Pool179_Plate7-6-A11-N11


title: Pool179_Plate7-6-A11-L24


title: Pool179_Plate7-6-A11-L23


title: Pool179_Plate7-6-A11-L12


title: Pool179_Plate7-6-A11-O24


title: Pool179_Plate7-6-A11-K24


title: Pool179_Plate7-6-A11-L11


title: Pool179_Plate7-6-A11-K23


title: Pool179_Plate7-6-A11-K12


title: Pool179_Plate7-6-A11-P11


title: Pool179_Plate7-6-A11-J12


title: Pool179_Plate7-6-A11-J11


title: Pool179_Plate7-6-A11-I23


title: Pool179_Plate7-6-A11-I24


title: Pool179_Plate7-6-A11-H24


title: Pool179_Plate7-6-A11-O23


title: Pool179_Plate7-6-A11-G24


title: Pool179_Plate7-6-A11-G23


title: Pool179_Plate7-6-A11-H11


title: Pool179_Plate7-6-A11-E11


title: Pool179_Plate7-6-A11-E12


title: Pool179_Plate7-6-A11-E23


title: Pool179_Plate7-6-A11-E24


title: Pool179_Plate7-6-A11-D12


title: Pool179_Plate7-6-A11-D24


title: Pool179_Plate7-6-A11-D11


title: Pool179_Plate7-6-A11-K11


title: Pool179_Plate7-6-A11-F12


title: Pool179_Plate7-6-A11-C24


title: Pool179_Plate7-6-A11-F23


title: Pool179_Plate7-6-A11-C12


title: Pool179_Plate7-6-A11-I11


title: Pool179_Plate7-6-A11-A24


title: Pool179_Plate7-6-A11-H12


title: Pool179_Plate7-6-A11-A23


title: Pool179_Plate7-6-A11-C11


title: Pool179_Plate7-5-A11-P22


title: Pool179_Plate7-5-A11-P21


title: Pool179_Plate7-6-A11-G12


title: Pool179_Plate7-6-A11-A11


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title: Pool179_Plate7-5-A11-P10


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title: Pool178_Plate7-2-C10-P15


title: Pool178_Plate7-2-C10-O16


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title: Pool178_Plate7-2-C10-L16


title: Pool178_Plate7-2-C10-K16


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title: Pool178_Plate7-2-C10-J16


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title: Pool178_Plate7-2-C10-G16


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title: Pool178_Plate7-2-C10-F16


title: Pool178_Plate7-2-C10-E15


title: Pool178_Plate7-2-C10-D16


title: Pool178_Plate7-2-C10-D15


title: Pool178_Plate7-2-C10-C16


title: Pool178_Plate7-2-C10-C15


title: Pool178_Plate7-2-C10-B16


title: Pool178_Plate7-2-C10-B15


title: Pool178_Plate7-1-C10-P13


title: Pool178_Plate7-1-C10-P2


title: Pool178_Plate7-2-C10-J15


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title: Pool178_Plate7-1-C10-L14


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title: Pool178_Plate7-1-C10-K1


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title: Pool178_Plate7-1-C10-I1


title: Pool178_Plate7-1-C10-I14


title: Pool178_Plate7-1-C10-H2


title: Pool178_Plate7-1-C10-H1


title: Pool178_Plate7-1-C10-H13


title: Pool178_Plate7-1-C10-G13


title: Pool178_Plate7-1-C10-F2


title: Pool178_Plate7-1-C10-G1


title: Pool178_Plate7-1-C10-G2


title: Pool178_Plate7-1-C10-G14


title: Pool178_Plate7-1-C10-F13


title: Pool178_Plate7-1-C10-E14


title: Pool178_Plate7-1-C10-E2


title: Pool178_Plate7-1-C10-E1


title: Pool178_Plate7-1-C10-E13


title: Pool178_Plate7-1-C10-F1


title: Pool178_Plate7-1-C10-D2


title: Pool178_Plate7-1-C10-F14


title: Pool178_Plate7-1-C10-D1


title: Pool178_Plate7-1-C10-C14


title: Pool178_Plate7-1-C10-C13


title: Pool178_Plate7-1-C10-B2


title: Pool178_Plate7-1-C10-D14


title: Pool178_Plate7-1-C10-C2


title: Pool178_Plate7-1-C10-D13


title: Pool178_Plate7-1-C10-A14


title: Pool178_Plate7-1-C10-B13


title: Pool178_Plate6-6-I2-P23

value: VTA


title: Pool178_Plate6-6-I2-P12

value: brain

value: MRN


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title: Pool178_Plate6-6-I2-L23


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title: Pool178_Plate6-6-I2-L24


title: Pool178_Plate6-6-I2-K23


title: Pool178_Plate6-6-I2-J24


title: Pool178_Plate6-6-I2-N11


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title: Pool178_Plate6-6-I2-H24


title: Pool178_Plate6-6-I2-I23


title: Pool178_Plate6-6-I2-I24


title: Pool178_Plate7-1-C10-B1


title: Pool178_Plate6-6-I2-H23


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title: Pool178_Plate6-6-I2-E23


title: Pool178_Plate6-6-I2-J23


title: Pool178_Plate6-6-I2-C24


title: Pool178_Plate6-6-I2-E12


title: Pool178_Plate6-6-I2-C23


title: Pool178_Plate6-6-I2-D23


title: Pool178_Plate6-6-I2-B23


title: Pool178_Plate6-6-I2-A24


title: Pool178_Plate6-6-I2-B24


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title: Pool178_Plate6-6-I2-A11


title: Pool178_Plate6-6-I2-A12


title: Pool178_Plate6-5-I2-P22


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title: Pool178_Plate6-6-I2-F24


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title: Pool178_Plate6-5-I2-L21


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title: Pool178_Plate6-5-I2-M22


title: Pool178_Plate6-5-I2-K21


title: Pool178_Plate6-5-I2-M21


title: Pool178_Plate6-5-I2-K22


title: Pool178_Plate6-5-I2-O21