title: TF ChIP-seq from whole organism (ENCLB520ELG)

description:
https://www.encodeproject.org/experiments/ENCSR414IVJ/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG6791-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR414IVJ
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR946XDT
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB520ELG
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG6791-GFP embryo (0-24 hours) insertion targeting D. melanogaster CG6791

value: ENCBS063CHI at ENCODE; https://www.encodeproject.org/ENCBS063CHI/


title: TF ChIP-seq from whole organism (ENCLB574TDU)

status: Public on Feb 27 2024

type: SRA

city: Stanford

first: ENCODE

last: DCC

state: CA

address: 300 Pasteur Dr

country: USA

institute: ENCODE DCC

description:
https://www.encodeproject.org/experiments/ENCSR717UAO/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing MBD-R2-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR717UAO
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR390EKV
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB574TDU
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

library_source: genomic

data_processing: See GSM*_README.txt supplementary file linked below

molecule: genomic DNA

organism: Drosophila melanogaster

source_name: Drosophila melanogaster strain MBD-R2-GFP embryo (0-24 hours) insertion targeting D. melanogaster MBD-R2

tag: antibody

value: whole organism

value: whole organisms

tag: biosample encode accession

tag: collection date

value: not applicable

tag: geographic location

tag: encode accession

tag: Sex

value: not collected

tag: dev stage

value: embryonic

tag: age

value: 0-24 hour

tag: lab

value: Kevin White, UChicago

tag: source

value: Kevin White

tag: link

value: ENCBS638BLI at ENCODE; https://www.encodeproject.org/ENCBS638BLI/


title: TF ChIP-seq from whole organism (ENCLB154CHD)

description:
https://www.encodeproject.org/experiments/ENCSR414IVJ/
***************
biological replicate number: 3
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG6791-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR414IVJ
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR946XDT
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB154CHD
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: ENCBS926CTZ at ENCODE; https://www.encodeproject.org/ENCBS926CTZ/


title: TF ChIP-seq from whole organism (ENCLB158VEI)

description:
https://www.encodeproject.org/experiments/ENCSR414IVJ/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG6791-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR414IVJ
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR946XDT
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB158VEI
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: ENCBS275VWX at ENCODE; https://www.encodeproject.org/ENCBS275VWX/


title: TF ChIP-seq from whole organism (ENCLB847YFF)

description:
https://www.encodeproject.org/experiments/ENCSR717UAO/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing MBD-R2-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR717UAO
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR390EKV
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB847YFF
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: ENCBS514PNE at ENCODE; https://www.encodeproject.org/ENCBS514PNE/


title: Control ChIP-seq from whole organism (ENCLB030UZM)

description:
https://www.encodeproject.org/experiments/ENCSR914NAI/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing Ptx1-eGFP fusion proteins.
experiment encode accession: ENCSR914NAI
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB030UZM
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain Ptx1-GFP embryo (0-24 hours) insertion targeting D. melanogaster Ptx1

value: ENCBS483OSF at ENCODE; https://www.encodeproject.org/ENCBS483OSF/


title: Control ChIP-seq from whole organism (ENCLB656OWE)

description:
https://www.encodeproject.org/experiments/ENCSR600RUY/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing rib-eGFP fusion proteins.
experiment encode accession: ENCSR600RUY
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB656OWE
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain rib-GFP embryo (0-24 hours) insertion targeting D. melanogaster rib

value: ENCBS110TUJ at ENCODE; https://www.encodeproject.org/ENCBS110TUJ/


title: TF ChIP-seq from whole organism (ENCLB606GST)

description:
https://www.encodeproject.org/experiments/ENCSR910QGB/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG6689-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR910QGB
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR160LJR
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB606GST
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG6689-GFP embryo (0-24 hours) insertion targeting D. melanogaster CG6689

value: ENCBS291BIX at ENCODE; https://www.encodeproject.org/ENCBS291BIX/


title: Control ChIP-seq from whole organism (ENCLB998GUW)

description:
https://www.encodeproject.org/experiments/ENCSR908SHX/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing Dll-eGFP fusion proteins.
experiment encode accession: ENCSR908SHX
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB998GUW
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain Dll-GFP embryo (0-24 hours) insertion targeting D. melanogaster Dll

value: ENCBS105ZGI at ENCODE; https://www.encodeproject.org/ENCBS105ZGI/


title: TF ChIP-seq from whole organism (ENCLB794YSJ)

description:
https://www.encodeproject.org/experiments/ENCSR911IFG/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG6272-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR911IFG
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR379GFH
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB794YSJ
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG6272-GFP embryo (0-24 hours) insertion targeting D. melanogaster Irbp18

value: ENCBS875IIV at ENCODE; https://www.encodeproject.org/ENCBS875IIV/


title: TF ChIP-seq from whole organism (ENCLB748SWM)

description:
https://www.encodeproject.org/experiments/ENCSR910QGB/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG6689-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR910QGB
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR160LJR
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB748SWM
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: whole organism

value: ENCBS254EYW at ENCODE; https://www.encodeproject.org/ENCBS254EYW/


title: TF ChIP-seq from whole organism (ENCLB391TXV)

description:
https://www.encodeproject.org/experiments/ENCSR906ZIN/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing HLH4C-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR906ZIN
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR284YMU
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB391TXV
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain HLH4C-GFP embryo (8-24 hours) insertion targeting D. melanogaster HLH4C

value: whole organisms

value: not applicable

value: ENCBS927ZMP at ENCODE; https://www.encodeproject.org/ENCBS927ZMP/


title: Control ChIP-seq from whole organism (ENCLB483NXG)

description:
https://www.encodeproject.org/experiments/ENCSR409JCT/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing CG13287-eGFP fusion proteins.
experiment encode accession: ENCSR409JCT
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB483NXG
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG13287-GFP embryo (6-24 hours) insertion targeting D. melanogaster CG13287

value: not collected

value: embryonic

value: ENCBS401WLB at ENCODE; https://www.encodeproject.org/ENCBS401WLB/


title: Control ChIP-seq from whole organism (ENCLB319SXV)

description:
https://www.encodeproject.org/experiments/ENCSR409JKA/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing bbx-eGFP fusion proteins.
experiment encode accession: ENCSR409JKA
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB319SXV
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain bbx-GFP embryo (0-24 hours) insertion targeting D. melanogaster bbx

value: 0-24 hour

value: Kevin White, UChicago

value: Kevin White

value: ENCBS870GTT at ENCODE; https://www.encodeproject.org/ENCBS870GTT/


title: TF ChIP-seq from whole organism (ENCLB234VYK)

description:
https://www.encodeproject.org/experiments/ENCSR906ZIN/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing HLH4C-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR906ZIN
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR284YMU
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB234VYK
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: ENCBS122EHF at ENCODE; https://www.encodeproject.org/ENCBS122EHF/


title: TF ChIP-seq from whole organism (ENCLB139UYQ)

description:
https://www.encodeproject.org/experiments/ENCSR906ZIN/
***************
biological replicate number: 3
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing HLH4C-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR906ZIN
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR284YMU
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB139UYQ
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: ENCBS389CBZ at ENCODE; https://www.encodeproject.org/ENCBS389CBZ/


title: TF ChIP-seq from whole organism (ENCLB106GBG)

description:
https://www.encodeproject.org/experiments/ENCSR906BIV/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing amos-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR906BIV
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR420MRU
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB106GBG
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain amos-GFP embryo (0-18 hours) insertion targeting D. melanogaster amos

value: amos

value: 0-18 hour

value: ENCBS286GXW at ENCODE; https://www.encodeproject.org/ENCBS286GXW/


title: Control ChIP-seq from whole organism (ENCLB542CEO)

description:
https://www.encodeproject.org/experiments/ENCSR598RHP/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing dan-eGFP fusion proteins.
experiment encode accession: ENCSR598RHP
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB542CEO
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain dan-GFP embryo (0-8 hours) insertion targeting D. melanogaster dan

value: whole organism

value: 0-8 hour

value: ENCBS578FEN at ENCODE; https://www.encodeproject.org/ENCBS578FEN/


title: TF ChIP-seq from whole organism (ENCLB409FVC)

description:
https://www.encodeproject.org/experiments/ENCSR901DHA/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG34224-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR901DHA
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR316VMT
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB409FVC
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG34224-GFP embryo (0-24 hours) insertion targeting D. melanogaster CG34224

value: whole organisms

value: not applicable

value: ENCBS648VXN at ENCODE; https://www.encodeproject.org/ENCBS648VXN/


title: TF ChIP-seq from whole organism (ENCLB191TPB)

description:
https://www.encodeproject.org/experiments/ENCSR901DHA/
***************
biological replicate number: 3
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG34224-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR901DHA
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR316VMT
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB191TPB
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: not collected

value: embryonic

value: ENCBS823EPV at ENCODE; https://www.encodeproject.org/ENCBS823EPV/


title: Control ChIP-seq from whole organism (ENCLB607PBK)

description:
https://www.encodeproject.org/experiments/ENCSR900JRE/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing croc-eGFP fusion proteins.
experiment encode accession: ENCSR900JRE
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB607PBK
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain croc-GFP embryo (0-18 hours) insertion targeting D. melanogaster croc

value: Kevin White, UChicago

value: ENCBS473CWW at ENCODE; https://www.encodeproject.org/ENCBS473CWW/


title: TF ChIP-seq from whole organism (ENCLB180NFK)

description:
https://www.encodeproject.org/experiments/ENCSR901DHA/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG34224-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR901DHA
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR316VMT
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB180NFK
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: 0-24 hour

value: Kevin White

value: ENCBS780SSC at ENCODE; https://www.encodeproject.org/ENCBS780SSC/


title: TF ChIP-seq from whole organism (ENCLB754CIF)

description:
https://www.encodeproject.org/experiments/ENCSR401EGK/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing Ptx1-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR401EGK
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR914NAI
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB754CIF
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: ENCBS972VQO at ENCODE; https://www.encodeproject.org/ENCBS972VQO/


title: TF ChIP-seq from whole organism (ENCLB301ULZ)

description:
https://www.encodeproject.org/experiments/ENCSR897YWT/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing toy-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR897YWT
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR560UPF
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB301ULZ
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain toy-GFP embryo (0-24 hours) insertion targeting D. melanogaster toy

value: toy

value: ENCBS976SJL at ENCODE; https://www.encodeproject.org/ENCBS976SJL/


title: TF ChIP-seq from whole organism (ENCLB305GRX)

description:
https://www.encodeproject.org/experiments/ENCSR401EGK/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing Ptx1-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR401EGK
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR914NAI
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB305GRX
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: whole organism

value: ENCBS708TXH at ENCODE; https://www.encodeproject.org/ENCBS708TXH/


title: TF ChIP-seq from whole organism (ENCLB395WYH)

description:
https://www.encodeproject.org/experiments/ENCSR400ZYC/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing Scr-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR400ZYC
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR281KJG
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB395WYH
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain Scr-GFP embryo (0-24 hours) insertion targeting D. melanogaster Scr

value: Scr

value: ENCBS551BLL at ENCODE; https://www.encodeproject.org/ENCBS551BLL/


title: Control ChIP-seq from whole organism (ENCLB010TJQ)

description:
https://www.encodeproject.org/experiments/ENCSR907GOP/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing dimm-eGFP fusion proteins.
experiment encode accession: ENCSR907GOP
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB010TJQ
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain dimm-GFP embryo (0-24 hours) insertion targeting D. melanogaster dimm

value: whole organisms

value: not applicable

value: ENCBS216GRV at ENCODE; https://www.encodeproject.org/ENCBS216GRV/


title: TF ChIP-seq from whole organism (ENCLB083EKY)

description:
https://www.encodeproject.org/experiments/ENCSR897YWT/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing toy-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR897YWT
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR560UPF
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB083EKY
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: not collected

value: embryonic

value: ENCBS318ZBW at ENCODE; https://www.encodeproject.org/ENCBS318ZBW/


title: TF ChIP-seq from whole organism (ENCLB224CYV)

description:
https://www.encodeproject.org/experiments/ENCSR400ZYC/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing Scr-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR400ZYC
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR281KJG
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB224CYV
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: Kevin White, UChicago

value: ENCBS541YZM at ENCODE; https://www.encodeproject.org/ENCBS541YZM/


title: TF ChIP-seq from whole organism (ENCLB631YVF)

description:
https://www.encodeproject.org/experiments/ENCSR709FCW/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing sisA-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR709FCW
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR464NKQ
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB631YVF
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain sisA-GFP embryo (0-18 hours) insertion targeting D. melanogaster sisA

value: sisA

value: 0-18 hour

value: Kevin White

value: ENCBS716ZEF at ENCODE; https://www.encodeproject.org/ENCBS716ZEF/


title: Control ChIP-seq from whole organism (ENCLB999BIT)

description:
https://www.encodeproject.org/experiments/ENCSR708WBJ/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing so-eGFP fusion proteins.
experiment encode accession: ENCSR708WBJ
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB999BIT
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain so-GFP embryo (0-24 hours) insertion targeting D. melanogaster so

value: 0-24 hour

value: ENCBS683VFL at ENCODE; https://www.encodeproject.org/ENCBS683VFL/


title: TF ChIP-seq from whole organism (ENCLB455ARQ)

description:
https://www.encodeproject.org/experiments/ENCSR709FCW/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing sisA-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR709FCW
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR464NKQ
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB455ARQ
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: whole organism

value: ENCBS258TVS at ENCODE; https://www.encodeproject.org/ENCBS258TVS/


title: Control ChIP-seq from whole organism (ENCLB492GWY)

description:
https://www.encodeproject.org/experiments/ENCSR597JVN/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing CG31224-eGFP fusion proteins.
experiment encode accession: ENCSR597JVN
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB492GWY
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG31224-GFP embryo (0-24 hours) insertion targeting D. melanogaster CG31224

value: ENCBS479WQP at ENCODE; https://www.encodeproject.org/ENCBS479WQP/


title: TF ChIP-seq from whole organism (ENCLB083EIY)

description:
https://www.encodeproject.org/experiments/ENCSR707SPH/
***************
biological replicate number: 3
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing H15-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR707SPH
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR683BOL
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB083EIY
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain H15-GFP embryo (8-24 hours) insertion targeting D. melanogaster H15

value: whole organisms

value: ENCBS330WZZ at ENCODE; https://www.encodeproject.org/ENCBS330WZZ/


title: TF ChIP-seq from whole organism (ENCLB681NWV)

description:
https://www.encodeproject.org/experiments/ENCSR707SPH/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing H15-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR707SPH
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR683BOL
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB681NWV
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: not applicable

value: ENCBS369HQR at ENCODE; https://www.encodeproject.org/ENCBS369HQR/


title: TF ChIP-seq from whole organism (ENCLB892ODK)

description:
https://www.encodeproject.org/experiments/ENCSR706YKU/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG14014-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR706YKU
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR083NCH
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB892ODK
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG14014-GFP embryo (0-24 hours) insertion targeting D. melanogaster CG14014

value: not collected

value: embryonic

value: ENCBS691FPN at ENCODE; https://www.encodeproject.org/ENCBS691FPN/


title: TF ChIP-seq from whole organism (ENCLB154HYS)

description:
https://www.encodeproject.org/experiments/ENCSR911IFG/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG6272-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR911IFG
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR379GFH
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB154HYS
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: Kevin White, UChicago

value: ENCBS964QFA at ENCODE; https://www.encodeproject.org/ENCBS964QFA/


title: TF ChIP-seq from whole organism (ENCLB197HYF)

description:
https://www.encodeproject.org/experiments/ENCSR707SPH/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing H15-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR707SPH
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR683BOL
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB197HYF
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: ENCBS760QFJ at ENCODE; https://www.encodeproject.org/ENCBS760QFJ/


title: TF ChIP-seq from whole organism (ENCLB856HAI)

description:
https://www.encodeproject.org/experiments/ENCSR706YKU/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG14014-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR706YKU
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR083NCH
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB856HAI
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: Kevin White

value: ENCBS963NCG at ENCODE; https://www.encodeproject.org/ENCBS963NCG/


title: TF ChIP-seq from whole organism (ENCLB273DQI)

description:
https://www.encodeproject.org/experiments/ENCSR906BIV/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing amos-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR906BIV
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR420MRU
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB273DQI
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: amos

value: 0-18 hour

value: ENCBS212JJO at ENCODE; https://www.encodeproject.org/ENCBS212JJO/


title: Control ChIP-seq from whole organism (ENCLB838UPV)

description:
https://www.encodeproject.org/experiments/ENCSR888NUC/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing CG14667-eGFP fusion proteins.
experiment encode accession: ENCSR888NUC
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB838UPV
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG14667-GFP embryo (0-24 hours) insertion targeting D. melanogaster CG14667

value: whole organism

value: 0-24 hour

value: ENCBS422GKG at ENCODE; https://www.encodeproject.org/ENCBS422GKG/


title: TF ChIP-seq from whole organism (ENCLB167WRB)

description:
https://www.encodeproject.org/experiments/ENCSR888TLQ/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG17612-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR888TLQ
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR242WFJ
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB167WRB
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG17612-GFP embryo (0-24 hours) insertion targeting D. melanogaster CG17612

value: whole organisms

value: ENCBS853VYD at ENCODE; https://www.encodeproject.org/ENCBS853VYD/


title: Control ChIP-seq from whole organism (ENCLB492QSK)

description:
https://www.encodeproject.org/experiments/ENCSR885XLT/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing zen2-eGFP fusion proteins.
experiment encode accession: ENCSR885XLT
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB492QSK
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain zen2-GFP embryo (0-6 hours) insertion targeting D. melanogaster zen2

value: not applicable

value: 0-6 hour

value: ENCBS211WEK at ENCODE; https://www.encodeproject.org/ENCBS211WEK/


title: TF ChIP-seq from whole organism (ENCLB697GXF)

description:
https://www.encodeproject.org/experiments/ENCSR888TLQ/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG17612-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR888TLQ
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR242WFJ
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB697GXF
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: not collected

value: embryonic

value: ENCBS244USD at ENCODE; https://www.encodeproject.org/ENCBS244USD/


title: Control ChIP-seq from whole organism (ENCLB235MDI)

description:
https://www.encodeproject.org/experiments/ENCSR400MGD/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing tgo-eGFP fusion proteins.
experiment encode accession: ENCSR400MGD
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB235MDI
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain tgo-GFP embryo (0-24 hours) insertion targeting D. melanogaster tgo

value: Kevin White, UChicago

value: ENCBS581DIY at ENCODE; https://www.encodeproject.org/ENCBS581DIY/


title: TF ChIP-seq from whole organism (ENCLB950RRL)

description:
https://www.encodeproject.org/experiments/ENCSR589TPK/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG10959-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR589TPK
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR039ULN
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB950RRL
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG10959-GFP embryo (0-8 hours) insertion targeting D. melanogaster CG10959

value: 0-8 hour

value: Kevin White

value: ENCBS287VWV at ENCODE; https://www.encodeproject.org/ENCBS287VWV/


title: TF ChIP-seq from whole organism (ENCLB566ZVY)

description:
https://www.encodeproject.org/experiments/ENCSR589TPK/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG10959-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR589TPK
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR039ULN
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB566ZVY
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: ENCBS550JEZ at ENCODE; https://www.encodeproject.org/ENCBS550JEZ/


title: TF ChIP-seq from whole organism (ENCLB577THW)

description:
https://www.encodeproject.org/experiments/ENCSR589OBZ/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG11560-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR589OBZ
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR621IZE
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB577THW
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG11560 embryo (0-24 hours) insertion targeting D. melanogaster CG11560

value: whole organism

value: ENCBS289RGP at ENCODE; https://www.encodeproject.org/ENCBS289RGP/


title: TF ChIP-seq from whole organism (ENCLB090KEU)

description:
https://www.encodeproject.org/experiments/ENCSR589OBZ/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG11560-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR589OBZ
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR621IZE
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB090KEU
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: 0-24 hour

value: ENCBS396XGY at ENCODE; https://www.encodeproject.org/ENCBS396XGY/


title: TF ChIP-seq from whole organism (ENCLB991WQP)

description:
https://www.encodeproject.org/experiments/ENCSR879ZOH/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG32121-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR879ZOH
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR342CYX
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB991WQP
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG32121-GFP pupa (2 days) insertion targeting D. melanogaster CG32121

value: whole organisms

value: pupa

value: 2 day

value: ENCBS664RLQ at ENCODE; https://www.encodeproject.org/ENCBS664RLQ/


title: Control ChIP-seq from whole organism (ENCLB877ZKU)

description:
https://www.encodeproject.org/experiments/ENCSR703FKX/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing H2.0-eGFP fusion proteins.
experiment encode accession: ENCSR703FKX
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB877ZKU
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain H2.0-GFP embryo (0-24 hours) insertion targeting D. melanogaster H2.0

value: not applicable

value: not collected

value: ENCBS105PEY at ENCODE; https://www.encodeproject.org/ENCBS105PEY/


title: Control ChIP-seq from whole organism (ENCLB668UBQ)

description:
https://www.encodeproject.org/experiments/ENCSR585AOJ/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing cbt-eGFP fusion proteins.
experiment encode accession: ENCSR585AOJ
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB668UBQ
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain cbt-GFP embryo (0-24 hours) insertion targeting D. melanogaster cbt

value: embryonic

value: Kevin White, UChicago

value: ENCBS331BNA at ENCODE; https://www.encodeproject.org/ENCBS331BNA/


title: Control ChIP-seq from whole organism (ENCLB045BYU)

description:
https://www.encodeproject.org/experiments/ENCSR583RLO/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing Bgb-eGFP fusion proteins.
experiment encode accession: ENCSR583RLO
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB045BYU
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain Bgb-GFP embryo (0-24 hours) insertion targeting D. melanogaster Bgb

value: Kevin White

value: ENCBS974CEH at ENCODE; https://www.encodeproject.org/ENCBS974CEH/


title: Control ChIP-seq from whole organism (ENCLB792LBY)

description:
https://www.encodeproject.org/experiments/ENCSR583JSU/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing danr-eGFP fusion proteins.
experiment encode accession: ENCSR583JSU
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB792LBY
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG7357-GFP embryo (0-24 hours) insertion targeting D. melanogaster Odj

value: ENCBS822WQQ at ENCODE; https://www.encodeproject.org/ENCBS822WQQ/


title: TF ChIP-seq from whole organism (ENCLB708CEM)

description:
https://www.encodeproject.org/experiments/ENCSR391EHB/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing hb-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR391EHB
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR232HHC
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB708CEM
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain hb-GFP embryo (0-24 hours) insertion targeting D. melanogaster hb

value: hb

value: whole organism

value: ENCBS673NHI at ENCODE; https://www.encodeproject.org/ENCBS673NHI/


title: Control ChIP-seq from whole organism (ENCLB343QVD)

description:
https://www.encodeproject.org/experiments/ENCSR874SUX/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing CG43689-eGFP fusion proteins.
experiment encode accession: ENCSR874SUX
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB343QVD
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG43689-GFP embryo (8-24 hours) insertion targeting D. melanogaster CG43689

value: ENCBS715JXH at ENCODE; https://www.encodeproject.org/ENCBS715JXH/


title: TF ChIP-seq from whole organism (ENCLB598AYD)

description:
https://www.encodeproject.org/experiments/ENCSR391EHB/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing hb-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR391EHB
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR232HHC
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB598AYD
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: whole organisms

value: 0-24 hour

value: ENCBS016RAS at ENCODE; https://www.encodeproject.org/ENCBS016RAS/


title: TF ChIP-seq from whole organism (ENCLB939CBW)

description:
https://www.encodeproject.org/experiments/ENCSR582XIG/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG32532-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR582XIG
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR805BQT
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB939CBW
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG32532-GFP embryo (8-24 hours) insertion targeting D. melanogaster CG32532

value: ENCBS513FKE at ENCODE; https://www.encodeproject.org/ENCBS513FKE/


title: TF ChIP-seq from whole organism (ENCLB923NYZ)

description:
https://www.encodeproject.org/experiments/ENCSR876FER/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing Taf1-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR876FER
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR438SMK
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB923NYZ
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain Taf1-GFP embryo (0-24 hours) insertion targeting D. melanogaster Taf1

value: not applicable

value: ENCBS376SVY at ENCODE; https://www.encodeproject.org/ENCBS376SVY/


title: TF ChIP-seq from whole organism (ENCLB990UAT)

description:
https://www.encodeproject.org/experiments/ENCSR391EHB/
***************
biological replicate number: 3
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing hb-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR391EHB
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR232HHC
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB990UAT
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: not collected

value: ENCBS801BRW at ENCODE; https://www.encodeproject.org/ENCBS801BRW/


title: TF ChIP-seq from whole organism (ENCLB066CYX)

description:
https://www.encodeproject.org/experiments/ENCSR582XIG/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG32532-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR582XIG
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR805BQT
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB066CYX
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: embryonic

value: Kevin White, UChicago

value: ENCBS983MMV at ENCODE; https://www.encodeproject.org/ENCBS983MMV/


title: Control ChIP-seq from whole organism (ENCLB797HHQ)

description:
https://www.encodeproject.org/experiments/ENCSR389XSM/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing Gug-eGFP fusion proteins.
experiment encode accession: ENCSR389XSM
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB797HHQ
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain Gug-GFP prepupa (1 day) insertion targeting D. melanogaster Gug

value: prepupa

value: 1 day

value: Kevin White

value: ENCBS042AFQ at ENCODE; https://www.encodeproject.org/ENCBS042AFQ/


title: TF ChIP-seq from whole organism (ENCLB072HVZ)

description:
https://www.encodeproject.org/experiments/ENCSR879ZOH/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG32121-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR879ZOH
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR342CYX
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB072HVZ
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: whole organism

value: pupa

value: 2 day

value: ENCBS238HCT at ENCODE; https://www.encodeproject.org/ENCBS238HCT/


title: Control ChIP-seq from whole organism (ENCLB815ZLS)

description:
https://www.encodeproject.org/experiments/ENCSR390EKV/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing MBD-R2-eGFP fusion proteins.
experiment encode accession: ENCSR390EKV
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB815ZLS
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain MBD-R2-GFP embryo (0-24 hours) insertion targeting D. melanogaster MBD-R2

value: whole organisms

value: 0-24 hour

value: ENCBS096ZRY at ENCODE; https://www.encodeproject.org/ENCBS096ZRY/


title: Control ChIP-seq from whole organism (ENCLB588SFS)

description:
https://www.encodeproject.org/experiments/ENCSR580CYL/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing inv-eGFP fusion proteins.
experiment encode accession: ENCSR580CYL
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB588SFS
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain inv-GFP embryo (0-24 hours) insertion targeting D. melanogaster inv

value: not applicable

value: ENCBS045LVV at ENCODE; https://www.encodeproject.org/ENCBS045LVV/


title: TF ChIP-seq from whole organism (ENCLB258MUF)

description:
https://www.encodeproject.org/experiments/ENCSR696YTM/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing Atf6-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR696YTM
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR059SDE
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB258MUF
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain Atf6-GFP embryo (0-24 hours) insertion targeting D. melanogaster Atf6

value: not collected

value: ENCBS591DTQ at ENCODE; https://www.encodeproject.org/ENCBS591DTQ/


title: TF ChIP-seq from whole organism (ENCLB373DRF)

description:
https://www.encodeproject.org/experiments/ENCSR696YTM/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing Atf6-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR696YTM
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR059SDE
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB373DRF
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: embryonic

value: Kevin White, UChicago

value: ENCBS345RXL at ENCODE; https://www.encodeproject.org/ENCBS345RXL/


title: TF ChIP-seq from whole organism (ENCLB460DAP)

description:
https://www.encodeproject.org/experiments/ENCSR576CBU/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing E2f1-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR576CBU
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR272RFG
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB460DAP
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain E2f1-GFP embryo (0-24 hours) insertion targeting D. melanogaster E2f1

value: ENCBS821KKF at ENCODE; https://www.encodeproject.org/ENCBS821KKF/


title: TF ChIP-seq from whole organism (ENCLB436DIO)

description:
https://www.encodeproject.org/experiments/ENCSR876FER/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing Taf1-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR876FER
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR438SMK
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB436DIO
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: Kevin White

value: ENCBS472NSY at ENCODE; https://www.encodeproject.org/ENCBS472NSY/


title: Control ChIP-seq from whole organism (ENCLB051XLE)

description:
https://www.encodeproject.org/experiments/ENCSR575KYH/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing wdn-eGFP fusion proteins.
experiment encode accession: ENCSR575KYH
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB051XLE
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain wdn-GFP embryo (0-24 hours) insertion targeting D. melanogaster wdn

value: whole organism

value: ENCBS947GOG at ENCODE; https://www.encodeproject.org/ENCBS947GOG/


title: TF ChIP-seq from whole organism (ENCLB389LWK)

description:
https://www.encodeproject.org/experiments/ENCSR576CBU/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing E2f1-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR576CBU
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR272RFG
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB389LWK
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: ENCBS103BXK at ENCODE; https://www.encodeproject.org/ENCBS103BXK/


title: Control ChIP-seq from whole organism (ENCLB765GCN)

description:
https://www.encodeproject.org/experiments/ENCSR388MKI/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing C15-eGFP fusion proteins.
experiment encode accession: ENCSR388MKI
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB765GCN
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain C15-GFP embryo (0-24 hours) insertion targeting D. melanogaster C15

value: ENCBS235MSG at ENCODE; https://www.encodeproject.org/ENCBS235MSG/


title: TF ChIP-seq from whole organism (ENCLB932YMZ)

description:
https://www.encodeproject.org/experiments/ENCSR589OBZ/
***************
biological replicate number: 3
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG11560-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR589OBZ
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR621IZE
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB932YMZ
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG11560 embryo (0-24 hours) insertion targeting D. melanogaster CG11560

value: whole organisms

value: ENCBS543CPV at ENCODE; https://www.encodeproject.org/ENCBS543CPV/


title: TF ChIP-seq from whole organism (ENCLB367GSW)

description:
https://www.encodeproject.org/experiments/ENCSR387WYA/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG8765-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR387WYA
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR549JSG
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB367GSW
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG8765-GFP embryo (0-8 hours) insertion targeting D. melanogaster CG8765

value: 0-8 hour

value: ENCBS359RZT at ENCODE; https://www.encodeproject.org/ENCBS359RZT/


title: TF ChIP-seq from whole organism (ENCLB679GPS)

description:
https://www.encodeproject.org/experiments/ENCSR387WYA/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG8765-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR387WYA
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR549JSG
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB679GPS
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: not applicable

value: ENCBS372EVP at ENCODE; https://www.encodeproject.org/ENCBS372EVP/


title: Control ChIP-seq from whole organism (ENCLB920QHM)

description:
https://www.encodeproject.org/experiments/ENCSR386YWV/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing CG5953-eGFP fusion proteins.
experiment encode accession: ENCSR386YWV
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB920QHM
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG5953-GFP embryo (0-24 hours) insertion targeting D. melanogaster CG5953

value: not collected

value: 0-24 hour

value: ENCBS160SPB at ENCODE; https://www.encodeproject.org/ENCBS160SPB/


title: TF ChIP-seq from whole organism (ENCLB205ZCB)

description:
https://www.encodeproject.org/experiments/ENCSR867JOP/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing Bgb-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR867JOP
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR583RLO
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB205ZCB
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: Bgb

value: embryonic

value: Kevin White, UChicago

value: ENCBS167DPQ at ENCODE; https://www.encodeproject.org/ENCBS167DPQ/


title: TF ChIP-seq from whole organism (ENCLB153HWM)

description:
https://www.encodeproject.org/experiments/ENCSR867JOP/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing Bgb-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR867JOP
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR583RLO
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB153HWM
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: whole organism

value: Kevin White

value: ENCBS019YQB at ENCODE; https://www.encodeproject.org/ENCBS019YQB/


title: Control ChIP-seq from whole organism (ENCLB354HZM)

description:
https://www.encodeproject.org/experiments/ENCSR570FSI/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing prd-eGFP fusion proteins.
experiment encode accession: ENCSR570FSI
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB354HZM
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain prd-GFP embryo (0-8 hours) insertion targeting D. melanogaster prd

value: ENCBS396LGL at ENCODE; https://www.encodeproject.org/ENCBS396LGL/


title: Control ChIP-seq from whole organism (ENCLB561EQO)

description:
https://www.encodeproject.org/experiments/ENCSR563UMA/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing ro-eGFP fusion proteins.
experiment encode accession: ENCSR563UMA
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB561EQO
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain ro-GFP embryo (0-24 hours) insertion targeting D. melanogaster ro

value: whole organisms

value: ENCBS128MJD at ENCODE; https://www.encodeproject.org/ENCBS128MJD/


title: TF ChIP-seq from whole organism (ENCLB096EDU)

description:
https://www.encodeproject.org/experiments/ENCSR562UCW/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing dan-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR562UCW
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR598RHP
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB096EDU
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain dan-GFP embryo (0-8 hours) insertion targeting D. melanogaster dan

value: dan

value: 0-8 hour

value: ENCBS454GOL at ENCODE; https://www.encodeproject.org/ENCBS454GOL/


title: Control ChIP-seq from whole organism (ENCLB512BKD)

description:
https://www.encodeproject.org/experiments/ENCSR573BGT/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing ham-eGFP fusion proteins.
experiment encode accession: ENCSR573BGT
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB512BKD
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain ham-GFP embryo (0-24 hours) insertion targeting D. melanogaster ham

value: not applicable

value: ENCBS201BBW at ENCODE; https://www.encodeproject.org/ENCBS201BBW/


title: TF ChIP-seq from whole organism (ENCLB669EJA)

description:
https://www.encodeproject.org/experiments/ENCSR562UCW/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing dan-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR562UCW
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR598RHP
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB669EJA
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: not collected

value: ENCBS644QKW at ENCODE; https://www.encodeproject.org/ENCBS644QKW/


title: TF ChIP-seq from whole organism (ENCLB406ZZD)

description:
https://www.encodeproject.org/experiments/ENCSR865KPF/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing gce-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR865KPF
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR382GIY
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB406ZZD
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain gce-GFP embryo (8-24 hours) insertion targeting D. melanogaster gce

value: gce

value: ENCBS449IGS at ENCODE; https://www.encodeproject.org/ENCBS449IGS/


title: TF ChIP-seq from whole organism (ENCLB575KRC)

description:
https://www.encodeproject.org/experiments/ENCSR555ZFT/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing vnd-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR555ZFT
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR560WDZ
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB575KRC
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain vnd-GFP embryo (0-24 hours) insertion targeting D. melanogaster vnd

value: vnd

value: embryonic

value: 0-24 hour

value: Kevin White, UChicago

value: ENCBS829BKJ at ENCODE; https://www.encodeproject.org/ENCBS829BKJ/


title: TF ChIP-seq from whole organism (ENCLB193HZK)

description:
https://www.encodeproject.org/experiments/ENCSR693KEG/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing peb-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR693KEG
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR077OEA
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB193HZK
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain peb-GFP embryo (0-24 hours) insertion targeting D. melanogaster peb

value: peb

value: whole organism

value: Kevin White

value: ENCBS431SPR at ENCODE; https://www.encodeproject.org/ENCBS431SPR/


title: TF ChIP-seq from whole organism (ENCLB771KWL)

description:
https://www.encodeproject.org/experiments/ENCSR865KPF/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing gce-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR865KPF
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR382GIY
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB771KWL
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: whole organisms

value: ENCBS714CAH at ENCODE; https://www.encodeproject.org/ENCBS714CAH/


title: TF ChIP-seq from whole organism (ENCLB767MGP)

description:
https://www.encodeproject.org/experiments/ENCSR555ZFT/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing vnd-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR555ZFT
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR560WDZ
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB767MGP
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: not applicable

value: ENCBS678CEL at ENCODE; https://www.encodeproject.org/ENCBS678CEL/


title: Control ChIP-seq from whole organism (ENCLB052OFA)

description:
https://www.encodeproject.org/experiments/ENCSR865FHW/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing al-eGFP fusion proteins.
experiment encode accession: ENCSR865FHW
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB052OFA
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain al-GFP embryo (0-24 hours) insertion targeting D. melanogaster al

value: not collected

value: ENCBS535SMR at ENCODE; https://www.encodeproject.org/ENCBS535SMR/


title: TF ChIP-seq from whole organism (ENCLB723WIM)

description:
https://www.encodeproject.org/experiments/ENCSR693KEG/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing peb-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR693KEG
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR077OEA
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB723WIM
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: ENCBS417IND at ENCODE; https://www.encodeproject.org/ENCBS417IND/


title: Control ChIP-seq from whole organism (ENCLB235ISW)

description:
https://www.encodeproject.org/experiments/ENCSR560UPF/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing toy-eGFP fusion proteins.
experiment encode accession: ENCSR560UPF
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB235ISW
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain toy-GFP embryo (0-24 hours) insertion targeting D. melanogaster toy

value: ENCBS690IIE at ENCODE; https://www.encodeproject.org/ENCBS690IIE/


title: TF ChIP-seq from whole organism (ENCLB818QSY)

description:
https://www.encodeproject.org/experiments/ENCSR555ZFT/
***************
biological replicate number: 3
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing vnd-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR555ZFT
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR560WDZ
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB818QSY
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: vnd

value: ENCBS222PRL at ENCODE; https://www.encodeproject.org/ENCBS222PRL/


title: Control ChIP-seq from whole organism (ENCLB737FPA)

description:
https://www.encodeproject.org/experiments/ENCSR560WDZ/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing vnd-eGFP fusion proteins.
experiment encode accession: ENCSR560WDZ
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB737FPA
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: embryonic

value: 0-24 hour

value: ENCBS955ORJ at ENCODE; https://www.encodeproject.org/ENCBS955ORJ/


title: Control ChIP-seq from whole organism (ENCLB311JZS)

description:
https://www.encodeproject.org/experiments/ENCSR860DSL/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing Ada2b-eGFP fusion proteins.
experiment encode accession: ENCSR860DSL
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB311JZS
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain Ada2b-GFP embryo (0-18 hours) insertion targeting D. melanogaster Ada2b

value: 0-18 hour

value: Kevin White, UChicago

value: ENCBS326WYK at ENCODE; https://www.encodeproject.org/ENCBS326WYK/


title: Control ChIP-seq from whole organism (ENCLB168ICM)

description:
https://www.encodeproject.org/experiments/ENCSR549JSG/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing CG8765-eGFP fusion proteins.
experiment encode accession: ENCSR549JSG
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB168ICM
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: whole organism

value: 0-8 hour

value: Kevin White

value: ENCBS718UOL at ENCODE; https://www.encodeproject.org/ENCBS718UOL/


title: Control ChIP-seq from whole organism (ENCLB872EKJ)

description:
https://www.encodeproject.org/experiments/ENCSR382GIY/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing gce-eGFP fusion proteins.
experiment encode accession: ENCSR382GIY
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB872EKJ
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: whole organisms

value: not applicable

value: ENCBS506GUR at ENCODE; https://www.encodeproject.org/ENCBS506GUR/


title: TF ChIP-seq from whole organism (ENCLB920UMN)

description:
https://www.encodeproject.org/experiments/ENCSR552DCE/
***************
biological replicate number: 3
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing eg-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR552DCE
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR984TTC
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB920UMN
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain eg-GFP prepupa (2 days) insertion targeting D. melanogaster eg

value: eg

value: not collected

value: prepupa

value: 2 day

value: ENCBS730JPC at ENCODE; https://www.encodeproject.org/ENCBS730JPC/


title: TF ChIP-seq from whole organism (ENCLB079MHQ)

description:
https://www.encodeproject.org/experiments/ENCSR552DCE/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing eg-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR552DCE
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR984TTC
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB079MHQ
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: ENCBS601IVB at ENCODE; https://www.encodeproject.org/ENCBS601IVB/


title: Control ChIP-seq from whole organism (ENCLB957CEA)

description:
https://www.encodeproject.org/experiments/ENCSR855FUN/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing CG4404-eGFP fusion proteins.
experiment encode accession: ENCSR855FUN
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB957CEA
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG4404-GFP embryo (0-4 hours) insertion targeting D. melanogaster CG4404

value: embryonic

value: 0-4 hour

value: ENCBS009QJC at ENCODE; https://www.encodeproject.org/ENCBS009QJC/


title: TF ChIP-seq from whole organism (ENCLB142IMM)

description:
https://www.encodeproject.org/experiments/ENCSR552DCE/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing eg-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR552DCE
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR984TTC
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB142IMM
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: Kevin White, UChicago

value: ENCBS880EVO at ENCODE; https://www.encodeproject.org/ENCBS880EVO/


title: Control ChIP-seq from whole organism (ENCLB558ZHF)

description:
https://www.encodeproject.org/experiments/ENCSR379GFH/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing CG6272-eGFP fusion proteins.
experiment encode accession: ENCSR379GFH
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB558ZHF
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG6272-GFP embryo (0-24 hours) insertion targeting D. melanogaster Irbp18

value: whole organism

value: 0-24 hour

value: ENCBS091BHR at ENCODE; https://www.encodeproject.org/ENCBS091BHR/


title: Control ChIP-seq from whole organism (ENCLB486CHA)

description:
https://www.encodeproject.org/experiments/ENCSR852DOZ/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing Lim3-eGFP fusion proteins.
experiment encode accession: ENCSR852DOZ
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB486CHA
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain Lim3-GFP embryo (8-24 hours) insertion targeting D. melanogaster Lim3

value: whole organisms

value: Kevin White

value: ENCBS191SQE at ENCODE; https://www.encodeproject.org/ENCBS191SQE/


title: Control ChIP-seq from whole organism (ENCLB708LQL)

description:
https://www.encodeproject.org/experiments/ENCSR378MWY/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing CG4730-eGFP fusion proteins.
experiment encode accession: ENCSR378MWY
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB708LQL
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG4730-GFP embryo (0-24 hours) insertion targeting D. melanogaster CG4730

value: not applicable

value: ENCBS919MWJ at ENCODE; https://www.encodeproject.org/ENCBS919MWJ/


title: Control ChIP-seq from whole organism (ENCLB964TLF)

description:
https://www.encodeproject.org/experiments/ENCSR684BMF/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing CG6175-eGFP fusion proteins.
experiment encode accession: ENCSR684BMF
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB964TLF
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG6175-GFP embryo (0-24 hours) insertion targeting D. melanogaster CG6175

value: not collected

value: ENCBS264UHW at ENCODE; https://www.encodeproject.org/ENCBS264UHW/


title: TF ChIP-seq from whole organism (ENCLB260HAP)

description:
https://www.encodeproject.org/experiments/ENCSR543DKH/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing jigr1-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR543DKH
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR438LSW
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB260HAP
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain jigr1-GFP embryo (0-24 hours) insertion targeting D. melanogaster jigr1

value: ENCBS069FXX at ENCODE; https://www.encodeproject.org/ENCBS069FXX/


title: TF ChIP-seq from whole organism (ENCLB015CXC)

description:
https://www.encodeproject.org/experiments/ENCSR543DKH/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing jigr1-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR543DKH
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR438LSW
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB015CXC
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: ENCBS338VMH at ENCODE; https://www.encodeproject.org/ENCBS338VMH/


title: Control ChIP-seq from whole organism (ENCLB131MVU)

description:
https://www.encodeproject.org/experiments/ENCSR684BMF/
***************
biological replicate number: 2
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing CG6175-eGFP fusion proteins.
experiment encode accession: ENCSR684BMF
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB131MVU
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: embryonic

value: ENCBS224HJV at ENCODE; https://www.encodeproject.org/ENCBS224HJV/


title: TF ChIP-seq from whole organism (ENCLB993LCB)

description:
https://www.encodeproject.org/experiments/ENCSR543DKH/
***************
biological replicate number: 3
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing jigr1-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR543DKH
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR438LSW
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB993LCB
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: ENCBS567BVL at ENCODE; https://www.encodeproject.org/ENCBS567BVL/


title: Control ChIP-seq from whole organism (ENCLB294FME)

description:
https://www.encodeproject.org/experiments/ENCSR683BOL/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing H15-eGFP fusion proteins.
experiment encode accession: ENCSR683BOL
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB294FME
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain H15-GFP embryo (8-24 hours) insertion targeting D. melanogaster H15

value: Kevin White, UChicago

value: ENCBS491NJW at ENCODE; https://www.encodeproject.org/ENCBS491NJW/


title: TF ChIP-seq from whole organism (ENCLB677HHQ)

description:
https://www.encodeproject.org/experiments/ENCSR541BLD/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing ssp-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR541BLD
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR666DSG
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB677HHQ
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain ssp-GFP embryo (0-24 hours) insertion targeting D. melanogaster ssp

value: ssp

value: whole organism

value: ENCBS927FSU at ENCODE; https://www.encodeproject.org/ENCBS927FSU/


title: TF ChIP-seq from whole organism (ENCLB684WYF)

description:
https://www.encodeproject.org/experiments/ENCSR541BLD/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing ssp-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR541BLD
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR666DSG
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB684WYF
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: whole organisms

value: 0-24 hour

value: ENCBS093MIE at ENCODE; https://www.encodeproject.org/ENCBS093MIE/


title: TF ChIP-seq from whole organism (ENCLB831PVR)

description:
https://www.encodeproject.org/experiments/ENCSR865KPF/
***************
biological replicate number: 3
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing gce-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR865KPF
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR382GIY
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB831PVR
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: gce

value: not applicable

value: Kevin White

value: ENCBS332LFZ at ENCODE; https://www.encodeproject.org/ENCBS332LFZ/


title: Control ChIP-seq from whole organism (ENCLB707CEN)

description:
https://www.encodeproject.org/experiments/ENCSR539WNF/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing cas-eGFP fusion proteins.
experiment encode accession: ENCSR539WNF
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB707CEN
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain cas-GFP embryo (0-24 hours) insertion targeting D. melanogaster cas

value: not collected

value: ENCBS658KZR at ENCODE; https://www.encodeproject.org/ENCBS658KZR/


title: Control ChIP-seq from whole organism (ENCLB717PEA)

description:
https://www.encodeproject.org/experiments/ENCSR542DMG/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing Mrtf-eGFP fusion proteins.
experiment encode accession: ENCSR542DMG
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB717PEA
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain Mrtf-GFP embryo (0-24 hours) insertion targeting D. melanogaster Mrtf

value: embryonic

value: ENCBS003GNS at ENCODE; https://www.encodeproject.org/ENCBS003GNS/


title: Control ChIP-seq from whole organism (ENCLB979HHE)

description:
https://www.encodeproject.org/experiments/ENCSR679UNL/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing Ravus-eGFP fusion proteins.
experiment encode accession: ENCSR679UNL
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB979HHE
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain Ravus-GFP embryo (0-24 hours) insertion targeting D. melanogaster Ravus

value: ENCBS364CED at ENCODE; https://www.encodeproject.org/ENCBS364CED/


title: TF ChIP-seq from whole organism (ENCLB063FXZ)

description:
https://www.encodeproject.org/experiments/ENCSR375YXB/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing NFAT-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR375YXB
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR352NNV
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB063FXZ
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain NFAT-GFP embryo (0-24 hours) insertion targeting D. melanogaster NFAT

value: NFAT

value: Kevin White, UChicago

value: ENCBS670KNE at ENCODE; https://www.encodeproject.org/ENCBS670KNE/


title: Control ChIP-seq from whole organism (ENCLB313YQQ)

description:
https://www.encodeproject.org/experiments/ENCSR281KJG/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing Scr-eGFP fusion proteins.
experiment encode accession: ENCSR281KJG
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB313YQQ
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain Scr-GFP embryo (0-24 hours) insertion targeting D. melanogaster Scr

value: whole organism

value: ENCBS775OLM at ENCODE; https://www.encodeproject.org/ENCBS775OLM/


title: Control ChIP-seq from whole organism (ENCLB862NWC)

description:
https://www.encodeproject.org/experiments/ENCSR371XPI/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing CG2199-eGFP fusion proteins.
experiment encode accession: ENCSR371XPI
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB862NWC
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG2199-GFP embryo (8-24 hours) insertion targeting D. melanogaster CG2199

value: whole organisms

value: ENCBS282UVS at ENCODE; https://www.encodeproject.org/ENCBS282UVS/


title: Control ChIP-seq from whole organism (ENCLB019THZ)

description:
https://www.encodeproject.org/experiments/ENCSR272RFG/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing E2f1-eGFP fusion proteins.
experiment encode accession: ENCSR272RFG
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB019THZ
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain E2f1-GFP embryo (0-24 hours) insertion targeting D. melanogaster E2f1

value: 0-24 hour

value: ENCBS162FLR at ENCODE; https://www.encodeproject.org/ENCBS162FLR/


title: Control ChIP-seq from whole organism (ENCLB941NKI)

description:
https://www.encodeproject.org/experiments/ENCSR281YAH/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing CG2129-eGFP fusion proteins.
experiment encode accession: ENCSR281YAH
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB941NKI
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG2129-GFP embryo (0-4 hours) insertion targeting D. melanogaster CG2129

value: not applicable

value: 0-4 hour

value: ENCBS992TYH at ENCODE; https://www.encodeproject.org/ENCBS992TYH/


title: TF ChIP-seq from whole organism (ENCLB060WCH)

description:
https://www.encodeproject.org/experiments/ENCSR366HMN/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG2889-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR366HMN
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR169VAR
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB060WCH
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG2889-GFP embryo (0-24 hours) insertion targeting D. melanogaster CG2889

value: not collected

value: Kevin White

value: ENCBS438GVB at ENCODE; https://www.encodeproject.org/ENCBS438GVB/


title: TF ChIP-seq from whole organism (ENCLB674EEV)

description:
https://www.encodeproject.org/experiments/ENCSR375YXB/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing NFAT-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR375YXB
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR352NNV
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB674EEV
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: embryonic

value: ENCBS378CJL at ENCODE; https://www.encodeproject.org/ENCBS378CJL/


title: TF ChIP-seq from whole organism (ENCLB719RCF)

description:
https://www.encodeproject.org/experiments/ENCSR366HMN/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG2889-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR366HMN
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR169VAR
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB719RCF
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: ENCBS903VOG at ENCODE; https://www.encodeproject.org/ENCBS903VOG/


title: TF ChIP-seq from whole organism (ENCLB464WLY)

description:
https://www.encodeproject.org/experiments/ENCSR366HMN/
***************
biological replicate number: 3
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG2889-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR366HMN
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR169VAR
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB464WLY
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: Kevin White, UChicago

value: ENCBS336IGO at ENCODE; https://www.encodeproject.org/ENCBS336IGO/


title: TF ChIP-seq from whole organism (ENCLB269WSX)

description:
https://www.encodeproject.org/experiments/ENCSR362ZUH/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing ttk-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR362ZUH
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR194HLU
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB269WSX
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain ttk-GFP embryo (0-24 hours) insertion targeting D. melanogaster ttk

value: ttk

value: whole organism

value: ENCBS960XQE at ENCODE; https://www.encodeproject.org/ENCBS960XQE/


title: Control ChIP-seq from whole organism (ENCLB024HEM)

description:
https://www.encodeproject.org/experiments/ENCSR267POM/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing CG10348-eGFP fusion proteins.
experiment encode accession: ENCSR267POM
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB024HEM
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG10348-GFP pupa (2 days) insertion targeting D. melanogaster CG10348

value: whole organisms

value: pupa

value: 2 day

value: ENCBS055KWR at ENCODE; https://www.encodeproject.org/ENCBS055KWR/


title: TF ChIP-seq from whole organism (ENCLB563WXI)

description:
https://www.encodeproject.org/experiments/ENCSR362ZUH/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing ttk-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR362ZUH
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR194HLU
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB563WXI
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: not applicable

value: 0-24 hour

value: ENCBS249MQE at ENCODE; https://www.encodeproject.org/ENCBS249MQE/


title: Control ChIP-seq from whole organism (ENCLB314HYO)

description:
https://www.encodeproject.org/experiments/ENCSR361NFK/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing dysf-eGFP fusion proteins.
experiment encode accession: ENCSR361NFK
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB314HYO
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain dysf-GFP embryo (8-24 hours) insertion targeting D. melanogaster dysf

value: not collected

value: Kevin White

value: ENCBS298OUS at ENCODE; https://www.encodeproject.org/ENCBS298OUS/


title: TF ChIP-seq from whole organism (ENCLB789QXN)

description:
https://www.encodeproject.org/experiments/ENCSR268GMP/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing Ets98B-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR268GMP
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR535TSK
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB789QXN
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain Ets98B-GFP pupa (2 days) insertion targeting D. melanogaster Ets98B

value: ENCBS735YCB at ENCODE; https://www.encodeproject.org/ENCBS735YCB/


title: Control ChIP-seq from whole organism (ENCLB605OKK)

description:
https://www.encodeproject.org/experiments/ENCSR376YFF/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing dati-eGFP fusion proteins.
experiment encode accession: ENCSR376YFF
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB605OKK
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain dati-GFP embryo (8-24 hours) insertion targeting D. melanogaster dati

value: embryonic

value: ENCBS254JKA at ENCODE; https://www.encodeproject.org/ENCBS254JKA/