title: TF ChIP-seq from whole organism (ENCLB134AMS)

description:
https://www.encodeproject.org/experiments/ENCSR951RYW/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing ranshi-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR951RYW
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR946AOJ
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB134AMS
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: not applicable

value: not collected

value: ENCBS397RLI at ENCODE; https://www.encodeproject.org/ENCBS397RLI/


title: Control ChIP-seq from whole organism (ENCLB395GBE)

status: Public on Feb 27 2024

type: SRA

city: Stanford

first: ENCODE

last: DCC

state: CA

address: 300 Pasteur Dr

country: USA

institute: ENCODE DCC

description:
https://www.encodeproject.org/experiments/ENCSR778LRH/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing slbo-eGFP fusion proteins.
experiment encode accession: ENCSR778LRH
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB395GBE
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

library_source: genomic

data_processing: See GSM*_README.txt supplementary file linked below

molecule: genomic DNA

organism: Drosophila melanogaster

source_name: Drosophila melanogaster strain slbo-GFP embryo (8-24 hours) insertion targeting D. melanogaster slbo

value: whole organism

value: whole organisms

tag: biosample encode accession

tag: collection date

tag: geographic location

tag: encode accession

tag: Sex

tag: dev stage

value: embryonic

tag: age

tag: lab

value: Kevin White, UChicago

tag: source

value: Kevin White

tag: link

value: ENCBS543TNZ at ENCODE; https://www.encodeproject.org/ENCBS543TNZ/


title: TF ChIP-seq from whole organism (ENCLB645DIO)

description:
https://www.encodeproject.org/experiments/ENCSR779XKY/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing B-H1-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR779XKY
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR334WBE
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB645DIO
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain B-H1-GFP embryo (8-24 hours) insertion targeting D. melanogaster B-H1

tag: antibody

value: ENCBS068UGH at ENCODE; https://www.encodeproject.org/ENCBS068UGH/


title: Control ChIP-seq from whole organism (ENCLB461LXB)

description:
https://www.encodeproject.org/experiments/ENCSR797CVA/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing CG34422-eGFP fusion proteins.
experiment encode accession: ENCSR797CVA
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB461LXB
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG34422-GFP embryo (0-24 hours) insertion targeting D. melanogaster htk

value: 0-24 hour

value: ENCBS079ELO at ENCODE; https://www.encodeproject.org/ENCBS079ELO/


title: TF ChIP-seq from whole organism (ENCLB921ADZ)

description:
https://www.encodeproject.org/experiments/ENCSR949HEJ/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG11085-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR949HEJ
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR477BDH
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB921ADZ
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG11085-GFP embryo (0-24 hours) insertion targeting D. melanogaster CG11085

value: ENCBS671CQB at ENCODE; https://www.encodeproject.org/ENCBS671CQB/


title: TF ChIP-seq from whole organism (ENCLB739QMD)

description:
https://www.encodeproject.org/experiments/ENCSR949HEJ/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG11085-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR949HEJ
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR477BDH
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB739QMD
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: ENCBS999YCF at ENCODE; https://www.encodeproject.org/ENCBS999YCF/


title: Control ChIP-seq from whole organism (ENCLB024PLI)

description:
https://www.encodeproject.org/experiments/ENCSR947PSR/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing CG15336-eGFP fusion proteins.
experiment encode accession: ENCSR947PSR
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB024PLI
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG15336-GFP prepupa (2 days) insertion targeting D. melanogaster CG15336

value: prepupa

value: 2 day

value: ENCBS936VCT at ENCODE; https://www.encodeproject.org/ENCBS936VCT/


title: TF ChIP-seq from whole organism (ENCLB736AGP)

description:
https://www.encodeproject.org/experiments/ENCSR652TMY/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing Gug-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR652TMY
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR389XSM
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB736AGP
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain Gug-GFP prepupa (1 day) insertion targeting D. melanogaster Gug

value: Gug

value: not applicable

value: 1 day

value: ENCBS121OLP at ENCODE; https://www.encodeproject.org/ENCBS121OLP/


title: Control ChIP-seq from whole organism (ENCLB230BVI)

description:
https://www.encodeproject.org/experiments/ENCSR946XDT/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing CG6791-eGFP fusion proteins.
experiment encode accession: ENCSR946XDT
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB230BVI
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG6791-GFP embryo (0-24 hours) insertion targeting D. melanogaster CG6791

value: whole organism

value: whole organisms

value: not collected

value: ENCBS073TWH at ENCODE; https://www.encodeproject.org/ENCBS073TWH/


title: TF ChIP-seq from whole organism (ENCLB043ROG)

description:
https://www.encodeproject.org/experiments/ENCSR652TMY/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing Gug-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR652TMY
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR389XSM
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB043ROG
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: Kevin White, UChicago

value: Kevin White

value: ENCBS826VKF at ENCODE; https://www.encodeproject.org/ENCBS826VKF/


title: Control ChIP-seq from whole organism (ENCLB316QOB)

description:
https://www.encodeproject.org/experiments/ENCSR449OOC/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing sim-eGFP fusion proteins.
experiment encode accession: ENCSR449OOC
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB316QOB
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain sim-GFP embryo (0-24 hours) insertion targeting D. melanogaster sim

value: embryonic

value: 0-24 hour

value: ENCBS068JCM at ENCODE; https://www.encodeproject.org/ENCBS068JCM/


title: TF ChIP-seq from whole organism (ENCLB847TVK)

description:
https://www.encodeproject.org/experiments/ENCSR445JGO/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing dimm-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR445JGO
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR907GOP
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB847TVK
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain dimm-GFP embryo (0-24 hours) insertion targeting D. melanogaster dimm

value: dimm

value: ENCBS591BST at ENCODE; https://www.encodeproject.org/ENCBS591BST/


title: Control ChIP-seq from whole organism (ENCLB277YMT)

description:
https://www.encodeproject.org/experiments/ENCSR449BWI/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing CG8478-eGFP fusion proteins.
experiment encode accession: ENCSR449BWI
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB277YMT
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG8478-GFP embryo (0-24 hours) insertion targeting D. melanogaster CG8478

value: ENCBS114UCY at ENCODE; https://www.encodeproject.org/ENCBS114UCY/


title: Control ChIP-seq from whole organism (ENCLB470HRZ)

description:
https://www.encodeproject.org/experiments/ENCSR946RFO/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing Gug-eGFP fusion proteins.
experiment encode accession: ENCSR946RFO
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB470HRZ
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain Gug-GFP embryo (0-24 hours) insertion targeting D. melanogaster Gug

value: ENCBS897DKR at ENCODE; https://www.encodeproject.org/ENCBS897DKR/


title: Control ChIP-seq from whole organism (ENCLB667FKQ)

description:
https://www.encodeproject.org/experiments/ENCSR946AOJ/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing ranshi-eGFP fusion proteins.
experiment encode accession: ENCSR946AOJ
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB667FKQ
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain ranshi-GFP embryo (0-24 hours) insertion targeting D. melanogaster ranshi

value: not applicable

value: ENCBS487VXG at ENCODE; https://www.encodeproject.org/ENCBS487VXG/


title: TF ChIP-seq from whole organism (ENCLB679SBX)

description:
https://www.encodeproject.org/experiments/ENCSR772DDF/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing H2.0-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR772DDF
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR703FKX
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB679SBX
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain H2.0-GFP embryo (0-24 hours) insertion targeting D. melanogaster H2.0

value: ENCBS574TCU at ENCODE; https://www.encodeproject.org/ENCBS574TCU/


title: TF ChIP-seq from whole organism (ENCLB137LKE)

description:
https://www.encodeproject.org/experiments/ENCSR959LNN/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing bbx-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR959LNN
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR409JKA
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB137LKE
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain bbx-GFP embryo (0-24 hours) insertion targeting D. melanogaster bbx

value: bbx

value: whole organism

value: ENCBS032TEK at ENCODE; https://www.encodeproject.org/ENCBS032TEK/


title: TF ChIP-seq from whole organism (ENCLB868HOT)

description:
https://www.encodeproject.org/experiments/ENCSR945FQZ/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing zfh1-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR945FQZ
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR038YIY
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB868HOT
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain zfh1-GFP embryo (0-24 hours) insertion targeting D. melanogaster zfh1

value: whole organisms

value: not collected

value: ENCBS461PIS at ENCODE; https://www.encodeproject.org/ENCBS461PIS/


title: TF ChIP-seq from whole organism (ENCLB039HYE)

description:
https://www.encodeproject.org/experiments/ENCSR945FQZ/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing zfh1-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR945FQZ
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR038YIY
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB039HYE
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: Kevin White, UChicago

value: Kevin White

value: ENCBS544NRX at ENCODE; https://www.encodeproject.org/ENCBS544NRX/


title: TF ChIP-seq from whole organism (ENCLB020CTO)

description:
https://www.encodeproject.org/experiments/ENCSR445JGO/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing dimm-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR445JGO
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR907GOP
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB020CTO
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: embryonic

value: 0-24 hour

value: ENCBS058BMA at ENCODE; https://www.encodeproject.org/ENCBS058BMA/


title: TF ChIP-seq from whole organism (ENCLB198EQM)

description:
https://www.encodeproject.org/experiments/ENCSR945FQZ/
***************
biological replicate number: 3
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing zfh1-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR945FQZ
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR038YIY
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB198EQM
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: ENCBS126RCR at ENCODE; https://www.encodeproject.org/ENCBS126RCR/


title: TF ChIP-seq from whole organism (ENCLB524ZES)

description:
https://www.encodeproject.org/experiments/ENCSR781HCW/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG43689-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR781HCW
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR874SUX
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB524ZES
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG43689-GFP embryo (8-24 hours) insertion targeting D. melanogaster CG43689

value: ENCBS060YCH at ENCODE; https://www.encodeproject.org/ENCBS060YCH/


title: Control ChIP-seq from whole organism (ENCLB346CPO)

description:
https://www.encodeproject.org/experiments/ENCSR443OXH/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing CG16813-eGFP fusion proteins.
experiment encode accession: ENCSR443OXH
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB346CPO
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG16813-GFP embryo (0-8 hours) insertion targeting D. melanogaster CG16813

value: not applicable

value: 0-8 hour

value: ENCBS126XKW at ENCODE; https://www.encodeproject.org/ENCBS126XKW/


title: Control ChIP-seq from whole organism (ENCLB019GIA)

description:
https://www.encodeproject.org/experiments/ENCSR944FZP/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing rn-eGFP fusion proteins.
experiment encode accession: ENCSR944FZP
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB019GIA
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain rn-GFP pupa (unknown stages) insertion targeting D. melanogaster rn

value: pupa

value: unknown stage

value: ENCBS831PTY at ENCODE; https://www.encodeproject.org/ENCBS831PTY/


title: TF ChIP-seq from whole organism (ENCLB552JCV)

description:
https://www.encodeproject.org/experiments/ENCSR944GCA/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing gt-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR944GCA
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR632ZSN
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB552JCV
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain gt-GFP embryo (0-18 hours) insertion targeting D. melanogaster gt

value: gt

value: whole organism

value: whole organisms

value: 0-18 hour

value: ENCBS588JIS at ENCODE; https://www.encodeproject.org/ENCBS588JIS/


title: TF ChIP-seq from whole organism (ENCLB934IIY)

description:
https://www.encodeproject.org/experiments/ENCSR944GCA/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing gt-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR944GCA
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR632ZSN
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB934IIY
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: not collected

value: Kevin White, UChicago

value: Kevin White

value: ENCBS148WWN at ENCODE; https://www.encodeproject.org/ENCBS148WWN/


title: Control ChIP-seq from whole organism (ENCLB126XTK)

description:
https://www.encodeproject.org/experiments/ENCSR947RSM/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing CG32772-eGFP fusion proteins.
experiment encode accession: ENCSR947RSM
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB126XTK
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG32772-GFP embryo (0-24 hours) insertion targeting D. melanogaster CG32772

value: embryonic

value: 0-24 hour

value: ENCBS053WYV at ENCODE; https://www.encodeproject.org/ENCBS053WYV/


title: TF ChIP-seq from whole organism (ENCLB917SLM)

description:
https://www.encodeproject.org/experiments/ENCSR769GVA/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing nerfin-2-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR769GVA
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR284UJF
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB917SLM
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain nerfin-2-GFP embryo (8-24 hours) insertion targeting D. melanogaster nerfin-2

value: not applicable

value: ENCBS966NKJ at ENCODE; https://www.encodeproject.org/ENCBS966NKJ/


title: TF ChIP-seq from whole organism (ENCLB486MQH)

description:
https://www.encodeproject.org/experiments/ENCSR943HBD/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing row-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR943HBD
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR311YRQ
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB486MQH
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain row-GFP embryo (0-24 hours) insertion targeting D. melanogaster row

value: row

value: ENCBS184VQJ at ENCODE; https://www.encodeproject.org/ENCBS184VQJ/


title: TF ChIP-seq from whole organism (ENCLB935MRQ)

description:
https://www.encodeproject.org/experiments/ENCSR943HBD/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing row-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR943HBD
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR311YRQ
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB935MRQ
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: ENCBS707HZC at ENCODE; https://www.encodeproject.org/ENCBS707HZC/


title: TF ChIP-seq from whole organism (ENCLB338GPA)

description:
https://www.encodeproject.org/experiments/ENCSR943HBD/
***************
biological replicate number: 3
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing row-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR943HBD
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR311YRQ
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB338GPA
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: ENCBS136IZK at ENCODE; https://www.encodeproject.org/ENCBS136IZK/


title: TF ChIP-seq from whole organism (ENCLB304RQO)

description:
https://www.encodeproject.org/experiments/ENCSR767ORY/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG31224-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR767ORY
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR597JVN
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB304RQO
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG31224-GFP embryo (0-24 hours) insertion targeting D. melanogaster CG31224

value: whole organism

value: ENCBS553YOZ at ENCODE; https://www.encodeproject.org/ENCBS553YOZ/


title: TF ChIP-seq from whole organism (ENCLB507DWN)

description:
https://www.encodeproject.org/experiments/ENCSR772DDF/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing H2.0-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR772DDF
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR703FKX
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB507DWN
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: whole organisms

value: ENCBS541VYF at ENCODE; https://www.encodeproject.org/ENCBS541VYF/


title: TF ChIP-seq from whole organism (ENCLB959CMZ)

description:
https://www.encodeproject.org/experiments/ENCSR646UNP/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing crol-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR646UNP
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR666BYH
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB959CMZ
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain crol-GFP embryo (0-24 hours) insertion targeting D. melanogaster crol

value: crol

value: not collected

value: ENCBS420YPR at ENCODE; https://www.encodeproject.org/ENCBS420YPR/


title: Control ChIP-seq from whole organism (ENCLB491EUI)

description:
https://www.encodeproject.org/experiments/ENCSR646GHS/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing Optix-eGFP fusion proteins.
experiment encode accession: ENCSR646GHS
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB491EUI
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain Optix-GFP embryo (0-24 hours) insertion targeting D. melanogaster Optix

value: Kevin White, UChicago

value: Kevin White

value: ENCBS989IGG at ENCODE; https://www.encodeproject.org/ENCBS989IGG/


title: TF ChIP-seq from whole organism (ENCLB174NPI)

description:
https://www.encodeproject.org/experiments/ENCSR767ORY/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG31224-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR767ORY
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR597JVN
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB174NPI
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: embryonic

value: 0-24 hour

value: ENCBS361FWD at ENCODE; https://www.encodeproject.org/ENCBS361FWD/


title: Control ChIP-seq from whole organism (ENCLB954JRP)

description:
https://www.encodeproject.org/experiments/ENCSR942MQN/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing CG7372-eGFP fusion proteins.
experiment encode accession: ENCSR942MQN
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB954JRP
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG7372-GFP embryo (0-24 hours) insertion targeting D. melanogaster CG7372

value: not applicable

value: ENCBS953LCZ at ENCODE; https://www.encodeproject.org/ENCBS953LCZ/


title: Control ChIP-seq from whole organism (ENCLB882FOD)

description:
https://www.encodeproject.org/experiments/ENCSR942FZS/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing E2f2-eGFP fusion proteins.
experiment encode accession: ENCSR942FZS
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB882FOD
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain E2F2-GFP embryo (0-24 hours) insertion targeting D. melanogaster E2f2

value: ENCBS008IWB at ENCODE; https://www.encodeproject.org/ENCBS008IWB/


title: TF ChIP-seq from whole organism (ENCLB402PDS)

description:
https://www.encodeproject.org/experiments/ENCSR940IHI/
***************
biological replicate number: 4
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing Dll-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR940IHI
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR908SHX
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB402PDS
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain Dll-GFP embryo (0-24 hours) insertion targeting D. melanogaster Dll

value: Dll

value: ENCBS341EHG at ENCODE; https://www.encodeproject.org/ENCBS341EHG/


title: TF ChIP-seq from whole organism (ENCLB514KED)

description:
https://www.encodeproject.org/experiments/ENCSR646UNP/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing crol-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR646UNP
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR666BYH
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB514KED
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: whole organism

value: ENCBS234PIH at ENCODE; https://www.encodeproject.org/ENCBS234PIH/


title: Control ChIP-seq from whole organism (ENCLB007DPN)

description:
https://www.encodeproject.org/experiments/ENCSR765HZT/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing danr-eGFP fusion proteins.
experiment encode accession: ENCSR765HZT
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB007DPN
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain danr-GFP embryo (0-24 hours) insertion targeting D. melanogaster danr

value: whole organisms

value: ENCBS502RQA at ENCODE; https://www.encodeproject.org/ENCBS502RQA/


title: TF ChIP-seq from whole organism (ENCLB925AUU)

description:
https://www.encodeproject.org/experiments/ENCSR940IHI/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing Dll-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR940IHI
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR908SHX
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB925AUU
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: not collected

value: ENCBS517JDK at ENCODE; https://www.encodeproject.org/ENCBS517JDK/


title: TF ChIP-seq from whole organism (ENCLB871FTK)

description:
https://www.encodeproject.org/experiments/ENCSR440JLG/
***************
biological replicate number: 3
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing cbt-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR440JLG
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR585AOJ
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB871FTK
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain cbt-GFP embryo (0-24 hours) insertion targeting D. melanogaster cbt

value: cbt

value: Kevin White, UChicago

value: ENCBS211ZTR at ENCODE; https://www.encodeproject.org/ENCBS211ZTR/


title: TF ChIP-seq from whole organism (ENCLB047OKL)

description:
https://www.encodeproject.org/experiments/ENCSR440JLG/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing cbt-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR440JLG
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR585AOJ
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB047OKL
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: embryonic

value: Kevin White

value: ENCBS282FIT at ENCODE; https://www.encodeproject.org/ENCBS282FIT/


title: Control ChIP-seq from whole organism (ENCLB929VVF)

description:
https://www.encodeproject.org/experiments/ENCSR764BBX/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing ci-eGFP fusion proteins.
experiment encode accession: ENCSR764BBX
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB929VVF
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain ci-GFP embryo (0-24 hours) insertion targeting D. melanogaster ci

value: not applicable

value: 0-24 hour

value: ENCBS358DSG at ENCODE; https://www.encodeproject.org/ENCBS358DSG/


title: TF ChIP-seq from whole organism (ENCLB358NDL)

description:
https://www.encodeproject.org/experiments/ENCSR940IHI/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing Dll-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR940IHI
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR908SHX
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB358NDL
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: Dll

value: ENCBS503EHJ at ENCODE; https://www.encodeproject.org/ENCBS503EHJ/


title: TF ChIP-seq from whole organism (ENCLB918LBP)

description:
https://www.encodeproject.org/experiments/ENCSR940IHI/
***************
biological replicate number: 3
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing Dll-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR940IHI
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR908SHX
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB918LBP
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: whole organism

value: ENCBS623CQW at ENCODE; https://www.encodeproject.org/ENCBS623CQW/


title: Control ChIP-seq from whole organism (ENCLB197QHN)

description:
https://www.encodeproject.org/experiments/ENCSR438SMK/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing Taf1-eGFP fusion proteins.
experiment encode accession: ENCSR438SMK
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB197QHN
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain Taf1-GFP embryo (0-24 hours) insertion targeting D. melanogaster Taf1

value: whole organisms

value: ENCBS168WBE at ENCODE; https://www.encodeproject.org/ENCBS168WBE/


title: Control ChIP-seq from whole organism (ENCLB245FUS)

description:
https://www.encodeproject.org/experiments/ENCSR438LSW/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing jigr1-eGFP fusion proteins.
experiment encode accession: ENCSR438LSW
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB245FUS
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain jigr1-GFP embryo (0-24 hours) insertion targeting D. melanogaster jigr1

value: not collected

value: ENCBS187QGU at ENCODE; https://www.encodeproject.org/ENCBS187QGU/


title: TF ChIP-seq from whole organism (ENCLB107BIL)

description:
https://www.encodeproject.org/experiments/ENCSR769GVA/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing nerfin-2-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR769GVA
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR284UJF
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB107BIL
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: ENCBS410HJD at ENCODE; https://www.encodeproject.org/ENCBS410HJD/


title: TF ChIP-seq from whole organism (ENCLB937ZPM)

description:
https://www.encodeproject.org/experiments/ENCSR436KCT/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing sim-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR436KCT
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR449OOC
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB937ZPM
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain sim-GFP embryo (0-24 hours) insertion targeting D. melanogaster sim

value: sim

value: Kevin White, UChicago

value: ENCBS652QRA at ENCODE; https://www.encodeproject.org/ENCBS652QRA/


title: TF ChIP-seq from whole organism (ENCLB398HOL)

description:
https://www.encodeproject.org/experiments/ENCSR435SJO/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing seq-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR435SJO
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR024KKU
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB398HOL
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain seq-GFP embryo (0-24 hours) insertion targeting D. melanogaster seq

value: seq

value: embryonic

value: Kevin White

value: ENCBS220HCI at ENCODE; https://www.encodeproject.org/ENCBS220HCI/


title: TF ChIP-seq from whole organism (ENCLB783CED)

description:
https://www.encodeproject.org/experiments/ENCSR435SJO/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing seq-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR435SJO
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR024KKU
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB783CED
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: not applicable

value: 0-24 hour

value: ENCBS926YOO at ENCODE; https://www.encodeproject.org/ENCBS926YOO/


title: TF ChIP-seq from whole organism (ENCLB737JQT)

description:
https://www.encodeproject.org/experiments/ENCSR642CTA/
***************
biological replicate number: 3
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing ken-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR642CTA
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR797VOK
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB737JQT
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain ken-GFP embryo (0-24 hours) insertion targeting D. melanogaster ken

value: ken

value: whole organism

value: ENCBS623ELT at ENCODE; https://www.encodeproject.org/ENCBS623ELT/


title: TF ChIP-seq from whole organism (ENCLB341LRH)

description:
https://www.encodeproject.org/experiments/ENCSR436KCT/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing sim-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR436KCT
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR449OOC
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB341LRH
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: whole organisms

value: ENCBS911TNP at ENCODE; https://www.encodeproject.org/ENCBS911TNP/


title: TF ChIP-seq from whole organism (ENCLB950OEF)

description:
https://www.encodeproject.org/experiments/ENCSR642CTA/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing ken-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR642CTA
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR797VOK
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB950OEF
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: not collected

value: ENCBS945THI at ENCODE; https://www.encodeproject.org/ENCBS945THI/


title: TF ChIP-seq from whole organism (ENCLB976HUQ)

description:
https://www.encodeproject.org/experiments/ENCSR642CTA/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing ken-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR642CTA
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR797VOK
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB976HUQ
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: ENCBS719RUG at ENCODE; https://www.encodeproject.org/ENCBS719RUG/


title: TF ChIP-seq from whole organism (ENCLB382VHL)

description:
https://www.encodeproject.org/experiments/ENCSR440JLG/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing cbt-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR440JLG
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR585AOJ
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB382VHL
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: cbt

value: Kevin White, UChicago

value: ENCBS285TFS at ENCODE; https://www.encodeproject.org/ENCBS285TFS/


title: TF ChIP-seq from whole organism (ENCLB021HOH)

description:
https://www.encodeproject.org/experiments/ENCSR433OUV/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing ato-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR433OUV
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR797EQD
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB021HOH
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain ato-GFP embryo (0-18 hours) insertion targeting D. melanogaster ato

value: ato

value: embryonic

value: 0-18 hour

value: ENCBS427PBY at ENCODE; https://www.encodeproject.org/ENCBS427PBY/


title: TF ChIP-seq from whole organism (ENCLB704FOM)

description:
https://www.encodeproject.org/experiments/ENCSR433OUV/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing ato-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR433OUV
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR797EQD
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB704FOM
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: not applicable

value: Kevin White

value: ENCBS881TKB at ENCODE; https://www.encodeproject.org/ENCBS881TKB/


title: Control ChIP-seq from whole organism (ENCLB012JCC)

description:
https://www.encodeproject.org/experiments/ENCSR641AIJ/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing chinmo-eGFP fusion proteins.
experiment encode accession: ENCSR641AIJ
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB012JCC
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain chinmo-GFP embryo (6-24 hours) insertion targeting D. melanogaster chinmo

value: whole organism

value: ENCBS446KRM at ENCODE; https://www.encodeproject.org/ENCBS446KRM/


title: TF ChIP-seq from whole organism (ENCLB529JCB)

description:
https://www.encodeproject.org/experiments/ENCSR640JVH/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG1024-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR640JVH
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR504VLT
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB529JCB
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG1024-GFP embryo (0-24 hours) insertion targeting D. melanogaster CG1024

value: whole organisms

value: 0-24 hour

value: ENCBS953VUA at ENCODE; https://www.encodeproject.org/ENCBS953VUA/


title: TF ChIP-seq from whole organism (ENCLB381SCS)

description:
https://www.encodeproject.org/experiments/ENCSR640JVH/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG1024-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR640JVH
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR504VLT
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB381SCS
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: not collected

value: ENCBS982ZAI at ENCODE; https://www.encodeproject.org/ENCBS982ZAI/


title: TF ChIP-seq from whole organism (ENCLB871ZGM)

description:
https://www.encodeproject.org/experiments/ENCSR756QLO/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG11294-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR756QLO
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR465AXK
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB871ZGM
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG11294-GFP prepupa (1 day) insertion targeting D. melanogaster CG11294

value: prepupa

value: 1 day

value: ENCBS013WCR at ENCODE; https://www.encodeproject.org/ENCBS013WCR/


title: TF ChIP-seq from whole organism (ENCLB159YYZ)

description:
https://www.encodeproject.org/experiments/ENCSR756QLO/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG11294-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR756QLO
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR465AXK
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB159YYZ
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: Kevin White, UChicago

value: ENCBS083GEI at ENCODE; https://www.encodeproject.org/ENCBS083GEI/


title: Control ChIP-seq from whole organism (ENCLB529VWA)

description:
https://www.encodeproject.org/experiments/ENCSR430XGH/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing Dbx-eGFP fusion proteins.
experiment encode accession: ENCSR430XGH
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB529VWA
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain Dbx-GFP embryo (8-24 hours) insertion targeting D. melanogaster Dbx

value: embryonic

value: ENCBS240SFD at ENCODE; https://www.encodeproject.org/ENCBS240SFD/


title: Control ChIP-seq from whole organism (ENCLB848CKK)

description:
https://www.encodeproject.org/experiments/ENCSR754YDY/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing CG12605-eGFP fusion proteins.
experiment encode accession: ENCSR754YDY
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB848CKK
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG12605-GFP pupa (1 day) insertion targeting D. melanogaster CG12605

value: not applicable

value: pupa

value: ENCBS060IMS at ENCODE; https://www.encodeproject.org/ENCBS060IMS/


title: TF ChIP-seq from whole organism (ENCLB143VMS)

description:
https://www.encodeproject.org/experiments/ENCSR428CQN/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing esg-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR428CQN
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR251LYH
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB143VMS
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain esg-GFP embryo (0-24 hours) insertion targeting D. melanogaster esg

value: esg

value: whole organism

value: Kevin White

value: ENCBS085DJM at ENCODE; https://www.encodeproject.org/ENCBS085DJM/


title: TF ChIP-seq from whole organism (ENCLB751JRC)

description:
https://www.encodeproject.org/experiments/ENCSR934WJF/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing tna-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR934WJF
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR819KEO
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB751JRC
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain tna-GFP embryo (0-24 hours) insertion targeting D. melanogaster tna

value: tna

value: whole organisms

value: 0-24 hour

value: ENCBS073DFY at ENCODE; https://www.encodeproject.org/ENCBS073DFY/


title: Control ChIP-seq from whole organism (ENCLB630KBB)

description:
https://www.encodeproject.org/experiments/ENCSR753WWN/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing Dip2-eGFP fusion proteins.
experiment encode accession: ENCSR753WWN
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB630KBB
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain Dip2-GFP embryo (0-18 hours) insertion targeting D. melanogaster Dlip2

value: not collected

value: 0-18 hour

value: ENCBS692UZC at ENCODE; https://www.encodeproject.org/ENCBS692UZC/


title: Control ChIP-seq from whole organism (ENCLB263XME)

description:
https://www.encodeproject.org/experiments/ENCSR423JUZ/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing CG11093-eGFP fusion proteins.
experiment encode accession: ENCSR423JUZ
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB263XME
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG11093-GFP embryo (0-24 hours) insertion targeting D. melanogaster fuss

value: Kevin White, UChicago

value: ENCBS937VEH at ENCODE; https://www.encodeproject.org/ENCBS937VEH/


title: TF ChIP-seq from whole organism (ENCLB314COV)

description:
https://www.encodeproject.org/experiments/ENCSR423OOM/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG4404-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR423OOM
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR855FUN
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB314COV
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG4404-GFP embryo (0-4 hours) insertion targeting D. melanogaster CG4404

value: embryonic

value: 0-4 hour

value: ENCBS959OIY at ENCODE; https://www.encodeproject.org/ENCBS959OIY/


title: TF ChIP-seq from whole organism (ENCLB538TPH)

description:
https://www.encodeproject.org/experiments/ENCSR423OOM/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG4404-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR423OOM
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR855FUN
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB538TPH
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: not applicable

value: ENCBS907TOT at ENCODE; https://www.encodeproject.org/ENCBS907TOT/


title: TF ChIP-seq from whole organism (ENCLB953JLG)

description:
https://www.encodeproject.org/experiments/ENCSR931TMV/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CkIIα-i1-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR931TMV
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR343JAD
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB953JLG
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CkIIalpha-i1-GFP embryo (0-18 hours) insertion targeting D. melanogaster CkIIalpha-i1

value: whole organism

value: ENCBS744OVO at ENCODE; https://www.encodeproject.org/ENCBS744OVO/


title: TF ChIP-seq from whole organism (ENCLB662REY)

description:
https://www.encodeproject.org/experiments/ENCSR750SQL/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing slbo-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR750SQL
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR778LRH
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB662REY
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain slbo-GFP embryo (8-24 hours) insertion targeting D. melanogaster slbo

value: slbo

value: Kevin White

value: ENCBS888TAV at ENCODE; https://www.encodeproject.org/ENCBS888TAV/


title: TF ChIP-seq from whole organism (ENCLB630ALV)

description:
https://www.encodeproject.org/experiments/ENCSR931TMV/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CkIIα-i1-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR931TMV
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR343JAD
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB630ALV
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: whole organisms

value: ENCBS001CIL at ENCODE; https://www.encodeproject.org/ENCBS001CIL/


title: Control ChIP-seq from whole organism (ENCLB529YUO)

description:
https://www.encodeproject.org/experiments/ENCSR634KMJ/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing lov-eGFP fusion proteins.
experiment encode accession: ENCSR634KMJ
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB529YUO
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain lov-GFP embryo (0-24 hours) insertion targeting D. melanogaster lov

value: not collected

value: 0-24 hour

value: ENCBS729UHJ at ENCODE; https://www.encodeproject.org/ENCBS729UHJ/


title: TF ChIP-seq from whole organism (ENCLB284KRV)

description:
https://www.encodeproject.org/experiments/ENCSR750SQL/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing slbo-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR750SQL
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR778LRH
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB284KRV
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: Kevin White, UChicago

value: ENCBS943IOH at ENCODE; https://www.encodeproject.org/ENCBS943IOH/


title: TF ChIP-seq from whole organism (ENCLB557KOB)

description:
https://www.encodeproject.org/experiments/ENCSR928CNH/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG11093-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR928CNH
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR423JUZ
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB557KOB
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: embryonic

value: ENCBS369SMI at ENCODE; https://www.encodeproject.org/ENCBS369SMI/


title: TF ChIP-seq from whole organism (ENCLB340SMS)

description:
https://www.encodeproject.org/experiments/ENCSR928CNH/
***************
biological replicate number: 3
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG11093-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR928CNH
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR423JUZ
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB340SMS
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: ENCBS555VXC at ENCODE; https://www.encodeproject.org/ENCBS555VXC/


title: Control ChIP-seq from whole organism (ENCLB067SYL)

description:
https://www.encodeproject.org/experiments/ENCSR632ZSN/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing gt-eGFP fusion proteins.
experiment encode accession: ENCSR632ZSN
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB067SYL
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain gt-GFP embryo (0-18 hours) insertion targeting D. melanogaster gt

value: not applicable

value: 0-18 hour

value: ENCBS149QYF at ENCODE; https://www.encodeproject.org/ENCBS149QYF/


title: TF ChIP-seq from whole organism (ENCLB754QMC)

description:
https://www.encodeproject.org/experiments/ENCSR627JXA/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG8478-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR627JXA
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR449BWI
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB754QMC
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG8478-GFP embryo (0-24 hours) insertion targeting D. melanogaster CG8478

value: whole organism

value: ENCBS726XKN at ENCODE; https://www.encodeproject.org/ENCBS726XKN/


title: TF ChIP-seq from whole organism (ENCLB737JSJ)

description:
https://www.encodeproject.org/experiments/ENCSR627JXA/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG8478-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR627JXA
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR449BWI
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB737JSJ
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: Kevin White

value: ENCBS637QEE at ENCODE; https://www.encodeproject.org/ENCBS637QEE/


title: TF ChIP-seq from whole organism (ENCLB586SUH)

description:
https://www.encodeproject.org/experiments/ENCSR625TAA/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing GATAe-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR625TAA
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR051ZTW
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB586SUH
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain GATAe-GFP embryo (0-24 hours) insertion targeting D. melanogaster GATAe

value: GATAe

value: whole organisms

value: ENCBS302LAE at ENCODE; https://www.encodeproject.org/ENCBS302LAE/


title: TF ChIP-seq from whole organism (ENCLB503AAT)

description:
https://www.encodeproject.org/experiments/ENCSR625HUA/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing wdn-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR625HUA
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR575KYH
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB503AAT
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain wdn-GFP embryo (0-24 hours) insertion targeting D. melanogaster wdn

value: wdn

value: not collected

value: 0-24 hour

value: ENCBS563RPK at ENCODE; https://www.encodeproject.org/ENCBS563RPK/


title: Control ChIP-seq from whole organism (ENCLB826GDP)

description:
https://www.encodeproject.org/experiments/ENCSR923QLN/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing knrl-eGFP fusion proteins.
experiment encode accession: ENCSR923QLN
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB826GDP
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain knrl-GFP embryo (0-24 hours) insertion targeting D. melanogaster knrl

value: embryonic

value: Kevin White, UChicago

value: ENCBS118GKZ at ENCODE; https://www.encodeproject.org/ENCBS118GKZ/


title: Control ChIP-seq from whole organism (ENCLB318PXX)

description:
https://www.encodeproject.org/experiments/ENCSR424LMY/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing CG3847-eGFP fusion proteins.
experiment encode accession: ENCSR424LMY
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB318PXX
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG3847-GFP embryo (0-24 hours) insertion targeting D. melanogaster CG3847

value: not applicable

value: ENCBS082VYJ at ENCODE; https://www.encodeproject.org/ENCBS082VYJ/


title: TF ChIP-seq from whole organism (ENCLB040FDV)

description:
https://www.encodeproject.org/experiments/ENCSR625TAA/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing GATAe-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR625TAA
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR051ZTW
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB040FDV
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: ENCBS858LNC at ENCODE; https://www.encodeproject.org/ENCBS858LNC/


title: TF ChIP-seq from whole organism (ENCLB294SSE)

description:
https://www.encodeproject.org/experiments/ENCSR428CQN/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing esg-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR428CQN
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR251LYH
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB294SSE
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: esg

value: whole organism

value: ENCBS397OYY at ENCODE; https://www.encodeproject.org/ENCBS397OYY/


title: Control ChIP-seq from whole organism (ENCLB864SBV)

description:
https://www.encodeproject.org/experiments/ENCSR622CGQ/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing sob-eGFP fusion proteins.
experiment encode accession: ENCSR622CGQ
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB864SBV
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain sob-GFP embryo (0-24 hours) insertion targeting D. melanogaster sob

value: Kevin White

value: ENCBS861ZRU at ENCODE; https://www.encodeproject.org/ENCBS861ZRU/


title: Control ChIP-seq from whole organism (ENCLB977HMR)

description:
https://www.encodeproject.org/experiments/ENCSR922BGB/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing Aef1-eGFP fusion proteins.
experiment encode accession: ENCSR922BGB
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB977HMR
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain Aef1-GFP embryo (0-24 hours) insertion targeting D. melanogaster Aef1

value: whole organisms

value: ENCBS219JPH at ENCODE; https://www.encodeproject.org/ENCBS219JPH/


title: TF ChIP-seq from whole organism (ENCLB948NKC)

description:
https://www.encodeproject.org/experiments/ENCSR934WJF/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing tna-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR934WJF
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR819KEO
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB948NKC
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: tna

value: ENCBS034EYJ at ENCODE; https://www.encodeproject.org/ENCBS034EYJ/


title: TF ChIP-seq from whole organism (ENCLB639WPQ)

description:
https://www.encodeproject.org/experiments/ENCSR745YZM/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG32767-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR745YZM
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR141ASX
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB639WPQ
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG32767-GFP embryo (0-24 hours) insertion targeting D. melanogaster CG32767

value: not collected

value: 0-24 hour

value: ENCBS461SAE at ENCODE; https://www.encodeproject.org/ENCBS461SAE/


title: TF ChIP-seq from whole organism (ENCLB241XVD)

description:
https://www.encodeproject.org/experiments/ENCSR745YZM/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG32767-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR745YZM
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR141ASX
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB241XVD
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: embryonic

value: Kevin White, UChicago

value: ENCBS679XPZ at ENCODE; https://www.encodeproject.org/ENCBS679XPZ/


title: Control ChIP-seq from whole organism (ENCLB955TQL)

description:
https://www.encodeproject.org/experiments/ENCSR420MRU/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing amos-eGFP fusion proteins.
experiment encode accession: ENCSR420MRU
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB955TQL
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain amos-GFP embryo (0-18 hours) insertion targeting D. melanogaster amos

value: not applicable

value: 0-18 hour

value: ENCBS752CGM at ENCODE; https://www.encodeproject.org/ENCBS752CGM/


title: TF ChIP-seq from whole organism (ENCLB186XLK)

description:
https://www.encodeproject.org/experiments/ENCSR741PHI/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing sens-2-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR741PHI
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR311ZQW
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB186XLK
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain sens-2-GFP embryo (0-24 hours) insertion targeting D. melanogaster sens-2

value: whole organism

value: ENCBS729ACX at ENCODE; https://www.encodeproject.org/ENCBS729ACX/


title: TF ChIP-seq from whole organism (ENCLB351DMR)

description:
https://www.encodeproject.org/experiments/ENCSR928CNH/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing CG11093-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR928CNH
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR423JUZ
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB351DMR
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: Kevin White

value: ENCBS300KYU at ENCODE; https://www.encodeproject.org/ENCBS300KYU/


title: TF ChIP-seq from whole organism (ENCLB982YON)

description:
https://www.encodeproject.org/experiments/ENCSR741PHI/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing sens-2-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR741PHI
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR311ZQW
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB982YON
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: whole organisms

value: ENCBS990MVA at ENCODE; https://www.encodeproject.org/ENCBS990MVA/


title: TF ChIP-seq from whole organism (ENCLB828LKB)

description:
https://www.encodeproject.org/experiments/ENCSR615WMD/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing zen2-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR615WMD
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR885XLT
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB828LKB
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain zen2-GFP embryo (0-6 hours) insertion targeting D. melanogaster zen2

value: 0-6 hour

value: ENCBS381PZQ at ENCODE; https://www.encodeproject.org/ENCBS381PZQ/


title: Control ChIP-seq from whole organism (ENCLB059BDF)

description:
https://www.encodeproject.org/experiments/ENCSR732CLE/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing lmd-eGFP fusion proteins.
experiment encode accession: ENCSR732CLE
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB059BDF
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain lmd-GFP embryo (0-18 hours) insertion targeting D. melanogaster lmd

value: not collected

value: ENCBS674YNU at ENCODE; https://www.encodeproject.org/ENCBS674YNU/


title: TF ChIP-seq from whole organism (ENCLB474FYO)

description:
https://www.encodeproject.org/experiments/ENCSR615WMD/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing zen2-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR615WMD
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR885XLT
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB474FYO
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: ENCBS796RLX at ENCODE; https://www.encodeproject.org/ENCBS796RLX/


title: TF ChIP-seq from whole organism (ENCLB827LDT)

description:
https://www.encodeproject.org/experiments/ENCSR730OSA/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing dati-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR730OSA
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR376YFF
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB827LDT
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain dati-GFP embryo (8-24 hours) insertion targeting D. melanogaster dati

value: dati

value: embryonic

value: ENCBS157DDK at ENCODE; https://www.encodeproject.org/ENCBS157DDK/


title: TF ChIP-seq from whole organism (ENCLB035FWV)

description:
https://www.encodeproject.org/experiments/ENCSR920JZO/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing mld-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR920JZO
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR258BGT
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB035FWV
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain mld-GFP embryo (0-24 hours) insertion targeting D. melanogaster mld

value: mld

value: not applicable

value: 0-24 hour

value: Kevin White, UChicago

value: ENCBS548ZWH at ENCODE; https://www.encodeproject.org/ENCBS548ZWH/


title: TF ChIP-seq from whole organism (ENCLB189NVM)

description:
https://www.encodeproject.org/experiments/ENCSR920JZO/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing mld-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR920JZO
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR258BGT
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB189NVM
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: whole organism

value: Kevin White

value: ENCBS666PPM at ENCODE; https://www.encodeproject.org/ENCBS666PPM/


title: TF ChIP-seq from whole organism (ENCLB708ZRP)

description:
https://www.encodeproject.org/experiments/ENCSR730OSA/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing dati-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR730OSA
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR376YFF
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB708ZRP
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: whole organisms

value: ENCBS572XPQ at ENCODE; https://www.encodeproject.org/ENCBS572XPQ/


title: TF ChIP-seq from whole organism (ENCLB946FVG)

description:
https://www.encodeproject.org/experiments/ENCSR625HUA/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing wdn-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR625HUA
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR575KYH
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB946FVG
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: wdn

value: ENCBS738JQH at ENCODE; https://www.encodeproject.org/ENCBS738JQH/


title: TF ChIP-seq from whole organism (ENCLB066YEP)

description:
https://www.encodeproject.org/experiments/ENCSR728JEY/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing Awh-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR728JEY
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR239HEQ
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB066YEP
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain Awh-GFP embryo (0-24 hours) insertion targeting D. melanogaster Awh

value: Awh

value: not collected

value: ENCBS340DBN at ENCODE; https://www.encodeproject.org/ENCBS340DBN/


title: Control ChIP-seq from whole organism (ENCLB722TRC)

description:
https://www.encodeproject.org/experiments/ENCSR621IZE/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing CG11560-eGFP fusion proteins.
experiment encode accession: ENCSR621IZE
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB722TRC
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG11560 embryo (0-24 hours) insertion targeting D. melanogaster CG11560

value: embryonic

value: ENCBS907QTW at ENCODE; https://www.encodeproject.org/ENCBS907QTW/


title: TF ChIP-seq from whole organism (ENCLB290UGS)

description:
https://www.encodeproject.org/experiments/ENCSR417DNN/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing Doc2-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR417DNN
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR994IHY
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB290UGS
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain Doc2-GFP embryo (0-18 hours) insertion targeting D. melanogaster Doc2

value: 0-18 hour

value: ENCBS559FBB at ENCODE; https://www.encodeproject.org/ENCBS559FBB/


title: TF ChIP-seq from whole organism (ENCLB545EGK)

description:
https://www.encodeproject.org/experiments/ENCSR728JEY/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing Awh-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR728JEY
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR239HEQ
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB545EGK
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: not applicable

value: 0-24 hour

value: ENCBS805DGZ at ENCODE; https://www.encodeproject.org/ENCBS805DGZ/


title: TF ChIP-seq from whole organism (ENCLB973YAA)

description:
https://www.encodeproject.org/experiments/ENCSR615WMD/
***************
biological replicate number: 3
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing zen2-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR615WMD
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR885XLT
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB973YAA
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: whole organism

value: 0-6 hour

value: Kevin White, UChicago

value: ENCBS584LFG at ENCODE; https://www.encodeproject.org/ENCBS584LFG/


title: TF ChIP-seq from whole organism (ENCLB012AHK)

description:
https://www.encodeproject.org/experiments/ENCSR417DNN/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing Doc2-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR417DNN
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR994IHY
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB012AHK
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: whole organisms

value: Kevin White

value: ENCBS963ACW at ENCODE; https://www.encodeproject.org/ENCBS963ACW/


title: TF ChIP-seq from whole organism (ENCLB430HKF)

description:
https://www.encodeproject.org/experiments/ENCSR417AYH/
***************
biological replicate number: 3
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing C15-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR417AYH
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR388MKI
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB430HKF
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain C15-GFP embryo (0-24 hours) insertion targeting D. melanogaster C15

value: ENCBS268TZJ at ENCODE; https://www.encodeproject.org/ENCBS268TZJ/


title: TF ChIP-seq from whole organism (ENCLB581BQN)

description:
https://www.encodeproject.org/experiments/ENCSR417AYH/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing C15-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR417AYH
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR388MKI
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB581BQN
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: not collected

value: ENCBS602LRG at ENCODE; https://www.encodeproject.org/ENCBS602LRG/


title: TF ChIP-seq from whole organism (ENCLB112OIE)

description:
https://www.encodeproject.org/experiments/ENCSR415VUK/
***************
biological replicate number: 3
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing ase-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR415VUK
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR041UFE
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB112OIE
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain ase-GFP embryo (0-18 hours) insertion targeting D. melanogaster ase

value: ase

value: embryonic

value: ENCBS828ERX at ENCODE; https://www.encodeproject.org/ENCBS828ERX/


title: TF ChIP-seq from whole organism (ENCLB470VCG)

description:
https://www.encodeproject.org/experiments/ENCSR415VUK/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing ase-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR415VUK
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR041UFE
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB470VCG
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: 0-18 hour

value: ENCBS891ZPI at ENCODE; https://www.encodeproject.org/ENCBS891ZPI/


title: TF ChIP-seq from whole organism (ENCLB571VHA)

description:
https://www.encodeproject.org/experiments/ENCSR914YIP/
***************
biological replicate number: 3
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing croc-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR914YIP
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR900JRE
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB571VHA
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain croc-GFP embryo (0-18 hours) insertion targeting D. melanogaster croc

value: croc

value: not applicable

value: ENCBS518PKV at ENCODE; https://www.encodeproject.org/ENCBS518PKV/


title: TF ChIP-seq from whole organism (ENCLB966DVT)

description:
https://www.encodeproject.org/experiments/ENCSR914YIP/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing croc-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR914YIP
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR900JRE
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB966DVT
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: whole organism

value: ENCBS794JJX at ENCODE; https://www.encodeproject.org/ENCBS794JJX/


title: TF ChIP-seq from whole organism (ENCLB140AVP)

description:
https://www.encodeproject.org/experiments/ENCSR415VUK/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing ase-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR415VUK
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR041UFE
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB140AVP
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: Kevin White, UChicago

value: ENCBS371FHC at ENCODE; https://www.encodeproject.org/ENCBS371FHC/


title: Control ChIP-seq from whole organism (ENCLB718UAY)

description:
https://www.encodeproject.org/experiments/ENCSR612KXA/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing CG16779-eGFP fusion proteins.
experiment encode accession: ENCSR612KXA
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB718UAY
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG16779-GFP embryo (8-24 hours) insertion targeting D. melanogaster CG16779

value: whole organisms

value: Kevin White

value: ENCBS080NRZ at ENCODE; https://www.encodeproject.org/ENCBS080NRZ/


title: TF ChIP-seq from whole organism (ENCLB960WOQ)

description:
https://www.encodeproject.org/experiments/ENCSR914YIP/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing croc-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR914YIP
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR900JRE
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB960WOQ
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: not collected

value: ENCBS307YZD at ENCODE; https://www.encodeproject.org/ENCBS307YZD/


title: TF ChIP-seq from whole organism (ENCLB914IKT)

description:
https://www.encodeproject.org/experiments/ENCSR417AYH/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing C15-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR417AYH
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR388MKI
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB914IKT
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: 0-24 hour

value: ENCBS537AOQ at ENCODE; https://www.encodeproject.org/ENCBS537AOQ/


title: TF ChIP-seq from whole organism (ENCLB123QER)

description:
https://www.encodeproject.org/experiments/ENCSR920JZO/
***************
biological replicate number: 3
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing mld-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR920JZO
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR258BGT
encode release date: 2022-11-23
lab: Kevin White, UChicago
library encode accession: ENCLB123QER
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: mld

value: embryonic

value: ENCBS234DDE at ENCODE; https://www.encodeproject.org/ENCBS234DDE/


title: TF ChIP-seq from whole organism (ENCLB301CLE)

description:
https://www.encodeproject.org/experiments/ENCSR611XWP/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing chm-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR611XWP
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR231NHQ
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB301CLE
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain chm-GFP embryo (0-24 hours) insertion targeting D. melanogaster chm

value: chm

value: ENCBS638XQI at ENCODE; https://www.encodeproject.org/ENCBS638XQI/


title: Control ChIP-seq from whole organism (ENCLB791MEA)

description:
https://www.encodeproject.org/experiments/ENCSR611GTN/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing CG8119-eGFP fusion proteins.
experiment encode accession: ENCSR611GTN
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB791MEA
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG8119-GFP prepupa (1 day) insertion targeting D. melanogaster CG8119

value: not applicable

value: prepupa

value: 1 day

value: ENCBS306GYI at ENCODE; https://www.encodeproject.org/ENCBS306GYI/


title: Control ChIP-seq from whole organism (ENCLB946GMS)

description:
https://www.encodeproject.org/experiments/ENCSR609YOS/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing onecut-eGFP fusion proteins.
experiment encode accession: ENCSR609YOS
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB946GMS
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain onecut-GFP embryo (0-24 hours) insertion targeting D. melanogaster onecut

value: whole organism

value: Kevin White, UChicago

value: ENCBS110DXM at ENCODE; https://www.encodeproject.org/ENCBS110DXM/


title: Control ChIP-seq from whole organism (ENCLB066WBN)

description:
https://www.encodeproject.org/experiments/ENCSR724YNQ/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing otp-eGFP fusion proteins.
experiment encode accession: ENCSR724YNQ
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB066WBN
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain otp-GFP embryo (0-24 hours) insertion targeting D. melanogaster otp

value: whole organisms

value: Kevin White

value: ENCBS603XCG at ENCODE; https://www.encodeproject.org/ENCBS603XCG/


title: TF ChIP-seq from whole organism (ENCLB267QOT)

description:
https://www.encodeproject.org/experiments/ENCSR611XWP/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on transgenic flies expressing chm-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
experiment encode accession: ENCSR611XWP
assay title: TF ChIP-seq
assembly: dm6
possible controls: ENCSR231NHQ
encode release date: 2022-11-01
lab: Kevin White, UChicago
library encode accession: ENCLB267QOT
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

value: not collected

value: 0-24 hour

value: ENCBS812MFE at ENCODE; https://www.encodeproject.org/ENCBS812MFE/


title: Control ChIP-seq from whole organism (ENCLB263JTZ)

description:
https://www.encodeproject.org/experiments/ENCSR730IQA/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control for ChIP-seq on transgenic flies expressing CG42726-eGFP fusion proteins.
experiment encode accession: ENCSR730IQA
assay title: Control ChIP-seq
assembly: dm6
encode release date: 2022-12-19
lab: Kevin White, UChicago
library encode accession: ENCLB263JTZ
fragmentation methods: sonication (Bioruptor generic)
size range: 200-800

source_name: Drosophila melanogaster strain CG42726-GFP embryo (0-24 hours) insertion targeting D. melanogaster CG42726

value: embryonic

value: ENCBS096JMG at ENCODE; https://www.encodeproject.org/ENCBS096JMG/