title: Patient urine 196

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U51


title: Patient urine 193

status: Public on Dec 29 2024

type: SRA

city: Toronto

first: Mohit

last: Kapoor

state: Ontario

address: 60 Leonard Ave

country: Canada

institute: Schroeder Arthritis Institute

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U730

library_source: transcriptomic

data_processing:
Demultiplexing of .bcl files and conversion into Fastq files was performed, followed by quality assessment for each sample using the bcl2fastq conversion tool (v2.19.1.403).
UMI tags were extracted from raw files using UMI-tools software.
The first round of alignment using Bowtie1 was performed against human miRBase (v22.1), and then unaligned reads from this step are aligned to the human reference genome to obtain reads falling in miRBase chromosomal coordinates only.
Reads were collapsed according to associated UMI to remove PCR amplification bias.
UMI-based counts for each miRNA in a sample were generated from both alignments and summed to generate a final table of miRNA expression levels for each sample.
Inference was performed on the raw counts using a negative binomial regression estimated by quasi-likelihood with trended dispersion and normalized by total aligned sequences.
Assembly: GRCh38
Supplementary files format and content: 1 combined tab-delimited text file includes raw count values for each Sample.

molecule: total RNA

organism: Homo sapiens

source_name: urine

growth_protocol: No growth

extract_protocol:
RNA was extracted from 200 µL of human plasma or synovial fluid using the QIAcube following Qiagen's instructions for sample setup of the miRNeasy Serum/Plasma Advanced Kit (Cat #217204) or 250 µL to 1 mL human urine using Norgen Biotek's Urine Cell-Free Circulating RNA Purification Mini Kit following manufacturer instructions (Cat #56900).
miRNA libraries for miRNA-seq were prepared using Qiagen's QIAseq miRNA Library Kit optimized for biofluid samples (Cat # 331505). Individual libraries were quantified using a fluorometric high-sensitivity dsDNA assay and assessed using Bioanalyzer high sensitivity assay.

treatment_protocol: No treatment

tag: age

tag: Sex

value: MALE

tag: bmi

tag: procedure

value: PRIMARY LEFT KNEE REPLACEMENT

tag: tissue

value: urine

tag: leap id


title: Patient urine 194

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U732

value: FEMALE

value: PRIMARY BILATERAL KNEE REPLACEMENT


title: Patient urine 191

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U727


title: Patient urine 188

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U705


title: Patient urine 192

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U728

value: PRIMARY RIGHT KNEE REPLACEMENT


title: Patient urine 190

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U724


title: Patient urine 186

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U685


title: Patient urine 189

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U706


title: Patient urine 185

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U682


title: Patient urine 182

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U678


title: Patient urine 184

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U680


title: Patient urine 187

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U698


title: Patient urine 180

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U666


title: Patient urine 177

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U656


title: Patient urine 178

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U662


title: Patient urine 183

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U679


title: Patient urine 179

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U665


title: Patient urine 181

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U672


title: Patient urine 170

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U630


title: Patient urine 175

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U647


title: Patient urine 176

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U654


title: Patient urine 173

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U645


title: Patient urine 174

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U646


title: Patient urine 197

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U73


title: Patient urine 169

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U629


title: Patient urine 168

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U627


title: Patient urine 167

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U625


title: Patient urine 166

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U622


title: Patient urine 163

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U615


title: Patient urine 164

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U618


title: Patient urine 162

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U614


title: Patient urine 161

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U610


title: Patient urine 160

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U607


title: Patient urine 156

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U594


title: Patient urine 157

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U598


title: Patient urine 158

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U604


title: Patient urine 159

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U605


title: Patient urine 155

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U592


title: Patient urine 153

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U589


title: Patient urine 172

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U641


title: Patient urine 171

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U639


title: Patient urine 154

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U590


title: Patient urine 150

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U564


title: Patient urine 151

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U567


title: Patient urine 149

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U563


title: Patient urine 148

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U561


title: Patient urine 144

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U552


title: Patient urine 146

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U557


title: Patient urine 147

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U560


title: Patient urine 141

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U543


title: Patient urine 142

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U546


title: Patient urine 152

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U586


title: Patient urine 140

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U541


title: Patient urine 139

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U538


title: Patient urine 165

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U619


title: Patient urine 145

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U556


title: Patient urine 138

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U536


title: Patient urine 143

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U547


title: Patient urine 136

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U533


title: Patient urine 137

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U535


title: Patient urine 135

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U529


title: Patient urine 133

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U521


title: Patient urine 129

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U504


title: Patient urine 131

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U515


title: Patient urine 130

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U505


title: Patient urine 134

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U522


title: Patient urine 125

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U494


title: Patient urine 126

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U495


title: Patient urine 127

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U497


title: Patient urine 124

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U492


title: Patient urine 123

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U486


title: Patient urine 121

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U467


title: Patient urine 119

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U459


title: Patient urine 118

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U458


title: Patient urine 116

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U452


title: Patient urine 115

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U449


title: Patient urine 113

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U445


title: Patient urine 111

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U443


title: Patient urine 112

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U444


title: Patient urine 109

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U434


title: Patient urine 132

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U519


title: Patient urine 107

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U429


title: Patient urine 128

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U501


title: Patient urine 106

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U427


title: Patient urine 104

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U416


title: Patient urine 105

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U426


title: Patient urine 122

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U479


title: Patient urine 102

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U413


title: Patient urine 100

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U407


title: Patient urine 103

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U415


title: Patient urine 99

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U403


title: Patient urine 97

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U398


title: Patient urine 120

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U466


title: Patient urine 98

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U402


title: Patient urine 101

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U408


title: Patient urine 95

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U394


title: Patient urine 94

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U393


title: Patient urine 93

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U392


title: Patient urine 92

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U380


title: Patient urine 114

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U448


title: Patient urine 110

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U440


title: Patient urine 117

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U453


title: Patient urine 108

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U430


title: Patient urine 91

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U378


title: Patient urine 89

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U372


title: Patient urine 88

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U371


title: Patient urine 90

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U376


title: Patient urine 86

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U354


title: Patient urine 87

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U358


title: Patient urine 84

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U346


title: Patient urine 85

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U351


title: Patient urine 83

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U345


title: Patient urine 82

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U340


title: Patient urine 81

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U339


title: Patient urine 80

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U338


title: Patient urine 96

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U396


title: Patient urine 79

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U335


title: Patient urine 77

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U332


title: Patient urine 78

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U333


title: Patient urine 76

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U322


title: Patient urine 75

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U319


title: Patient urine 74

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U317


title: Patient urine 72

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U312


title: Patient urine 73

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U315


title: Patient urine 71

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U308


title: Patient urine 69

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U302


title: Patient urine 67

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U300


title: Patient urine 65

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U296


title: Patient urine 66

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U298


title: Patient urine 64

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U294


title: Patient urine 63

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U290


title: Patient urine 62

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U288


title: Patient urine 60

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U284


title: Patient urine 58

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U278


title: Patient urine 59

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U282


title: Patient urine 57

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U263


title: Patient urine 53

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U241


title: Patient urine 55

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U255


title: Patient urine 54

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U252


title: Patient urine 52

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U240


title: Patient urine 51

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U234


title: Patient urine 56

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U260


title: Patient urine 50

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U233


title: Patient urine 46

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U227


title: Patient urine 48

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U229


title: Patient urine 49

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U230


title: Patient urine 70

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U304


title: Patient urine 68

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U301


title: Patient urine 47

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U228


title: Patient urine 45

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U223


title: Patient urine 44

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U222


title: Patient urine 43

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U211


title: Patient urine 42

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U209


title: Patient urine 61

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U287


title: Patient urine 38

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U199


title: Patient urine 36

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U184


title: Patient urine 41

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U206


title: Patient urine 39

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U201


title: Patient urine 37

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U197


title: Patient urine 34

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U179


title: Patient urine 35

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U180


title: Patient urine 32

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U175


title: Patient urine 31

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U173


title: Patient urine 29

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U163


title: Patient urine 27

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U143


title: Patient urine 28

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U154


title: Patient urine 25

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U133


title: Patient urine 26

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U140


title: Patient urine 33

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U177


title: Patient urine 24

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U117


title: Patient urine 23

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U114


title: Patient urine 18

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U95


title: Patient urine 19

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U96


title: Patient urine 21

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U103


title: Patient urine 40

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U203


title: Patient urine 20

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U97


title: Patient urine 16

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U80


title: Patient urine 17

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U88


title: Patient urine 15

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U78


title: Patient urine 14

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U76


title: Patient urine 11

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U59


title: Patient urine 9

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U56


title: Patient urine 12

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U62


title: Patient urine 13

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U74


title: Patient urine 7

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U39


title: Patient urine 10

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U57


title: Patient urine 30

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U165


title: Patient urine 6

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U36


title: Patient urine 5

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U35


title: Patient urine 8

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U55


title: Patient urine 4

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U33


title: Patient urine 3

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U32


title: Patient synovial fluid 412

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1057L

source_name: synovial fluid

value: synovial fluid


title: Patient urine 1

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U16


title: Patient synovial fluid 410

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF998L


title: Patient synovial fluid 414

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1140L


title: Patient urine 22

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U110


title: Patient urine 2

description:
2023_Match414_3biofluids_miRNA_counts.tsv
U23


title: Patient synovial fluid 409

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF929L


title: Patient synovial fluid 413

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1068L


title: Patient synovial fluid 408

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF927L


title: Patient synovial fluid 406

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF903L


title: Patient synovial fluid 411

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1033L


title: Patient synovial fluid 403

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF784L


title: Patient synovial fluid 407

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF904L


title: Patient synovial fluid 402

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF754L


title: Patient synovial fluid 405

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF875L


title: Patient synovial fluid 404

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF854L


title: Patient synovial fluid 401

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF748L


title: Patient synovial fluid 398

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF419L


title: Patient synovial fluid 400

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF675L


title: Patient synovial fluid 399

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF425L


title: Patient synovial fluid 392

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF138L


title: Patient synovial fluid 396

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF370L


title: Patient synovial fluid 391

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF100L


title: Patient synovial fluid 395

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF324L


title: Patient synovial fluid 394

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF305L


title: Patient synovial fluid 389

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF25L


title: Patient synovial fluid 386

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1286L


title: Patient synovial fluid 385

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1281L


title: Patient synovial fluid 388

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1310L


title: Patient synovial fluid 387

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1304L


title: Patient synovial fluid 384

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1279L


title: Patient synovial fluid 393

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF280L


title: Patient synovial fluid 381

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1260L


title: Patient synovial fluid 383

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1271L


title: Patient synovial fluid 378

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1244L


title: Patient synovial fluid 379

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1251L


title: Patient synovial fluid 377

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1233L


title: Patient synovial fluid 397

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF411L


title: Patient synovial fluid 374

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1226L


title: Patient synovial fluid 375

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1227L


title: Patient synovial fluid 373

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1223L


title: Patient synovial fluid 376

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1231L


title: Patient synovial fluid 390

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF44L


title: Patient synovial fluid 372

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1217L


title: Patient synovial fluid 369

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1208L


title: Patient synovial fluid 371

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1215L


title: Patient synovial fluid 366

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1195L


title: Patient synovial fluid 368

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1206L


title: Patient synovial fluid 367

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1204L


title: Patient synovial fluid 365

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1194L


title: Patient synovial fluid 364

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1191L


title: Patient synovial fluid 382

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1266L


title: Patient synovial fluid 363

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1189L


title: Patient synovial fluid 361

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1185L


title: Patient synovial fluid 358

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1173L


title: Patient synovial fluid 380

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1254L


title: Patient synovial fluid 356

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1171L


title: Patient synovial fluid 357

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1172L


title: Patient synovial fluid 354

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1165L


title: Patient synovial fluid 370

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1209L


title: Patient synovial fluid 352

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1157L


title: Patient synovial fluid 359

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1174L


title: Patient synovial fluid 355

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1170L


title: Patient synovial fluid 351

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1155L


title: Patient synovial fluid 347

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1143L


title: Patient synovial fluid 346

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1132L


title: Patient synovial fluid 350

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1147L


title: Patient synovial fluid 348

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1145L


title: Patient synovial fluid 345

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1128L


title: Patient synovial fluid 342

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1117L


title: Patient synovial fluid 362

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1186L


title: Patient synovial fluid 339

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1105L


title: Patient synovial fluid 343

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1119L


title: Patient synovial fluid 338

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1103L


title: Patient synovial fluid 360

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1182L


title: Patient synovial fluid 336

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1101L


title: Patient synovial fluid 344

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1122L


title: Patient synovial fluid 335

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1096L


title: Patient synovial fluid 353

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1158L


title: Patient synovial fluid 330

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1077L


title: Patient synovial fluid 329

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1066L


title: Patient synovial fluid 340

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1106L


title: Patient synovial fluid 341

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1108L


title: Patient synovial fluid 334

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1092L


title: Patient synovial fluid 349

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1146L


title: Patient synovial fluid 327

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1064L


title: Patient synovial fluid 325

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1058L


title: Patient synovial fluid 337

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1102L


title: Patient synovial fluid 331

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1082L


title: Patient synovial fluid 326

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1060L


title: Patient synovial fluid 328

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1065L


title: Patient synovial fluid 332

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1089L


title: Patient synovial fluid 324

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1054L


title: Patient synovial fluid 321

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1029L


title: Patient synovial fluid 323

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1046L


title: Patient synovial fluid 320

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1019L


title: Patient synovial fluid 322

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1044L


title: Patient synovial fluid 319

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1015L


title: Patient synovial fluid 314

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF984L


title: Patient synovial fluid 311

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF966L


title: Patient synovial fluid 312

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF970L


title: Patient synovial fluid 317

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1001L


title: Patient synovial fluid 315

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF985L


title: Patient synovial fluid 313

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF982L


title: Patient synovial fluid 309

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF961L


title: Patient synovial fluid 310

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF964L


title: Patient synovial fluid 306

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF944L


title: Patient synovial fluid 333

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1090L


title: Patient synovial fluid 307

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF948L


title: Patient synovial fluid 303

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF887L


title: Patient synovial fluid 304

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF891L


title: Patient synovial fluid 302

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF876L


title: Patient synovial fluid 305

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF897L


title: Patient synovial fluid 308

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF957L


title: Patient synovial fluid 318

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF1011L


title: Patient synovial fluid 299

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF860L


title: Patient synovial fluid 296

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF836L


title: Patient synovial fluid 298

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF850L


title: Patient synovial fluid 301

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF874L


title: Patient synovial fluid 297

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF841L


title: Patient synovial fluid 294

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF817L


title: Patient synovial fluid 316

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF988L


title: Patient synovial fluid 291

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF767L


title: Patient synovial fluid 292

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF777L


title: Patient synovial fluid 295

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF826L


title: Patient synovial fluid 293

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF810L


title: Patient synovial fluid 300

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF867L


title: Patient synovial fluid 290

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF720L


title: Patient synovial fluid 286

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF537L


title: Patient synovial fluid 288

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF640L


title: Patient synovial fluid 289

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF667L


title: Patient synovial fluid 284

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF473L


title: Patient synovial fluid 285

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF491L


title: Patient synovial fluid 287

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF551L


title: Patient synovial fluid 283

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF391L


title: Patient synovial fluid 282

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF327L


title: Patient synovial fluid 281

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF277L


title: Patient synovial fluid 277

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF86L


title: Patient synovial fluid 278

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF139L


title: Patient synovial fluid 279

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF145L


title: Patient synovial fluid 276

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF946L


title: Patient synovial fluid 275

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF943L


title: Patient synovial fluid 280

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF257L


title: Patient synovial fluid 274

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF913L


title: Patient synovial fluid 273

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF900L


title: Patient synovial fluid 271

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF885L


title: Patient synovial fluid 267

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF862L


title: Patient synovial fluid 268

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF866L


title: Patient synovial fluid 264

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF843L


title: Patient synovial fluid 266

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF852L


title: Patient synovial fluid 269

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF868L


title: Patient synovial fluid 272

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF899L


title: Patient synovial fluid 262

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF832L


title: Patient synovial fluid 263

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF837L


title: Patient synovial fluid 257

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF820L


title: Patient synovial fluid 258

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF821L


title: Patient synovial fluid 259

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF822L


title: Patient synovial fluid 260

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF827L


title: Patient synovial fluid 261

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF828L


title: Patient synovial fluid 256

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF809L


title: Patient synovial fluid 254

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF803L


title: Patient synovial fluid 270

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF869L


title: Patient synovial fluid 251

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF791L


title: Patient synovial fluid 248

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF782L


title: Patient synovial fluid 252

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF799L


title: Patient synovial fluid 247

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF780L


title: Patient synovial fluid 250

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF789L


title: Patient synovial fluid 253

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF800L


title: Patient synovial fluid 265

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF851L


title: Patient synovial fluid 249

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF786L


title: Patient synovial fluid 245

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF776L


title: Patient synovial fluid 242

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF772L


title: Patient synovial fluid 246

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF778L


title: Patient synovial fluid 244

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF775L


title: Patient synovial fluid 240

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF768L


title: Patient synovial fluid 236

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF751L


title: Patient synovial fluid 255

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF804L


title: Patient synovial fluid 243

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF774LR


title: Patient synovial fluid 241

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF770L


title: Patient synovial fluid 237

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF756L


title: Patient synovial fluid 235

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF745L


title: Patient synovial fluid 233

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF733L


title: Patient synovial fluid 239

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF765L


title: Patient synovial fluid 238

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF757L


title: Patient synovial fluid 232

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF714L


title: Patient synovial fluid 229

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF683L


title: Patient synovial fluid 230

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF687L


title: Patient synovial fluid 228

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF677L


title: Patient synovial fluid 231

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF697L


title: Patient synovial fluid 227

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF676L


title: Patient synovial fluid 226

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF617L


title: Patient synovial fluid 225

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF616L


title: Patient synovial fluid 224

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF609L


title: Patient synovial fluid 223

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF582L


title: Patient synovial fluid 219

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF500L


title: Patient synovial fluid 218

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF478L


title: Patient synovial fluid 217

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF464L


title: Patient synovial fluid 222

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF569L


title: Patient synovial fluid 212

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF412L


title: Patient synovial fluid 220

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF507L


title: Patient synovial fluid 234

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF735L


title: Patient synovial fluid 211

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF357L


title: Patient synovial fluid 216

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF462L


title: Patient synovial fluid 207

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF326L


title: Patient synovial fluid 210

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF336L


title: Patient synovial fluid 208

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF328L


title: Patient synovial fluid 209

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF331L


title: Patient synovial fluid 205

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF292L


title: Patient synovial fluid 213

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF431L


title: Patient synovial fluid 204

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF286L


title: Patient synovial fluid 202

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF216L


title: Patient synovial fluid 200

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF188L


title: Patient synovial fluid 201

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF195L


title: Patient synovial fluid 199

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF164L


title: Patient synovial fluid 198

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF153L


title: Patient synovial fluid 221

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF545L


title: Patient synovial fluid 197

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF73L


title: Patient synovial fluid 195

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF29L


title: Patient synovial fluid 215

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF455L


title: Patient synovial fluid 214

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF447L


title: Patient synovial fluid 193

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF730L


title: Patient synovial fluid 192

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF728L


title: Patient synovial fluid 191

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF727L


title: Patient synovial fluid 190

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF724L


title: Patient synovial fluid 206

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF310L


title: Patient synovial fluid 186

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF685L


title: Patient synovial fluid 188

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF705L


title: Patient synovial fluid 189

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF706L


title: Patient synovial fluid 185

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF682L


title: Patient synovial fluid 187

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF698L


title: Patient synovial fluid 184

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF680L


title: Patient synovial fluid 178

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF662L


title: Patient synovial fluid 183

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF679L


title: Patient synovial fluid 180

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF666L


title: Patient synovial fluid 175

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF647L


title: Patient synovial fluid 181

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF672L


title: Patient synovial fluid 174

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF646L


title: Patient synovial fluid 196

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF51L


title: Patient synovial fluid 176

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF654L


title: Patient synovial fluid 172

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF641L


title: Patient synovial fluid 194

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF732L


title: Patient synovial fluid 203

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF245L


title: Patient synovial fluid 171

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF639L


title: Patient synovial fluid 168

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF627L


title: Patient synovial fluid 179

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF665L


title: Patient synovial fluid 166

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF622L


title: Patient synovial fluid 165

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF619L


title: Patient synovial fluid 170

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF630L


title: Patient synovial fluid 167

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF625L


title: Patient synovial fluid 182

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF678L


title: Patient synovial fluid 177

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF656L


title: Patient synovial fluid 163

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF615L


title: Patient synovial fluid 162

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF614L


title: Patient synovial fluid 161

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF610L


title: Patient synovial fluid 158

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF604L


title: Patient synovial fluid 160

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF607L


title: Patient synovial fluid 159

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF605L


title: Patient synovial fluid 157

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF598L


title: Patient synovial fluid 156

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF594L


title: Patient synovial fluid 155

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF592L


title: Patient synovial fluid 169

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF629L


title: Patient synovial fluid 151

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF567L


title: Patient synovial fluid 150

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF564L


title: Patient synovial fluid 148

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF561L


title: Patient synovial fluid 152

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF586L


title: Patient synovial fluid 149

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF563L


title: Patient synovial fluid 146

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF557L


title: Patient synovial fluid 153

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF589L


title: Patient synovial fluid 147

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF560L


title: Patient synovial fluid 144

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF552L


title: Patient synovial fluid 164

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF618L


title: Patient synovial fluid 141

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF543L


title: Patient synovial fluid 142

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF546L


title: Patient synovial fluid 140

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF541L


title: Patient synovial fluid 143

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF547L


title: Patient synovial fluid 145

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF556L


title: Patient synovial fluid 138

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF536L


title: Patient synovial fluid 139

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF538L


title: Patient synovial fluid 136

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF533L


title: Patient synovial fluid 154

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF590L


title: Patient synovial fluid 132

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF519L


title: Patient synovial fluid 135

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF529L


title: Patient synovial fluid 131

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF515L


title: Patient synovial fluid 133

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF521L


title: Patient synovial fluid 137

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF535L


title: Patient synovial fluid 134

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF522L


title: Patient synovial fluid 129

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF504L


title: Patient synovial fluid 128

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF501L


title: Patient synovial fluid 127

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF497L


title: Patient synovial fluid 123

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF486L


title: Patient synovial fluid 125

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF494L


title: Patient synovial fluid 124

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF492L


title: Patient synovial fluid 126

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF495L


title: Patient synovial fluid 122

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF479L


title: Patient synovial fluid 120

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF466L


title: Patient synovial fluid 119

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF459L


title: Patient synovial fluid 121

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF467L


title: Patient synovial fluid 118

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF458L


title: Patient synovial fluid 116

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF452L


title: Patient synovial fluid 117

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF453L


title: Patient synovial fluid 113

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF445L


title: Patient synovial fluid 112

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF444L


title: Patient synovial fluid 115

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF449L


title: Patient synovial fluid 111

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF443L


title: Patient synovial fluid 110

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF440L


title: Patient synovial fluid 130

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF505L


title: Patient synovial fluid 104

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF416L


title: Patient synovial fluid 109

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF434L


title: Patient synovial fluid 108

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF430L


title: Patient synovial fluid 102

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF413L


title: Patient synovial fluid 103

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF415L


title: Patient synovial fluid 105

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF426L


title: Patient synovial fluid 106

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF427L


title: Patient synovial fluid 100

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF407L


title: Patient synovial fluid 101

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF408L


title: Patient synovial fluid 114

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF448L


title: Patient synovial fluid 95

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF394L


title: Patient synovial fluid 97

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF398L


title: Patient synovial fluid 96

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF396L


title: Patient synovial fluid 94

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF393L


title: Patient synovial fluid 91

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF378L


title: Patient synovial fluid 93

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF392L


title: Patient synovial fluid 92

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF380L


title: Patient synovial fluid 99

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF403L


title: Patient synovial fluid 88

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF371L


title: Patient synovial fluid 87

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF358L


title: Patient synovial fluid 98

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF402L


title: Patient synovial fluid 90

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF376L


title: Patient synovial fluid 86

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF354L


title: Patient synovial fluid 84

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF346L


title: Patient synovial fluid 107

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF429L


title: Patient synovial fluid 89

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF372L


title: Patient synovial fluid 83

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF345L


title: Patient synovial fluid 85

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF351L


title: Patient synovial fluid 81

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF339L


title: Patient synovial fluid 79

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF335L


title: Patient synovial fluid 78

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF333L


title: Patient synovial fluid 82

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF340L


title: Patient synovial fluid 80

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF338L


title: Patient synovial fluid 77

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF332L


title: Patient synovial fluid 76

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF322L


title: Patient synovial fluid 74

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF317L


title: Patient synovial fluid 75

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF319L


title: Patient synovial fluid 73

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF315L


title: Patient synovial fluid 72

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF312L


title: Patient synovial fluid 69

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF302L


title: Patient synovial fluid 70

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF304L


title: Patient synovial fluid 68

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF301L


title: Patient synovial fluid 67

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF300L


title: Patient synovial fluid 64

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF294L


title: Patient synovial fluid 65

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF296L


title: Patient synovial fluid 71

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF308L


title: Patient synovial fluid 60

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF284L


title: Patient synovial fluid 63

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF290L


title: Patient synovial fluid 62

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF288L


title: Patient synovial fluid 59

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF282L


title: Patient synovial fluid 58

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF278L


title: Patient synovial fluid 56

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF260L


title: Patient synovial fluid 55

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF255L


title: Patient synovial fluid 57

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF263L


title: Patient synovial fluid 52

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF240L


title: Patient synovial fluid 54

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF252L


title: Patient synovial fluid 53

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF241L


title: Patient synovial fluid 50

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF233L


title: Patient synovial fluid 51

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF234L


title: Patient synovial fluid 49

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF230L


title: Patient synovial fluid 48

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF229L


title: Patient synovial fluid 46

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF227L


title: Patient synovial fluid 45

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF223L


title: Patient synovial fluid 44

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF222L


title: Patient synovial fluid 66

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF298L


title: Patient synovial fluid 43

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF211L


title: Patient synovial fluid 61

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF287L


title: Patient synovial fluid 42

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF209L


title: Patient synovial fluid 41

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF206L


title: Patient synovial fluid 38

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF199L


title: Patient synovial fluid 39

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF201L


title: Patient synovial fluid 37

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF197L


title: Patient synovial fluid 35

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF180L


title: Patient synovial fluid 34

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF179L


title: Patient synovial fluid 31

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF173L


title: Patient synovial fluid 30

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF165L


title: Patient synovial fluid 32

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF175L


title: Patient synovial fluid 29

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF163L


title: Patient synovial fluid 28

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF154L


title: Patient synovial fluid 25

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF133L


title: Patient synovial fluid 24

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF117L


title: Patient synovial fluid 27

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF143L


title: Patient synovial fluid 47

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF228L


title: Patient synovial fluid 22

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF110L


title: Patient synovial fluid 21

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF103L


title: Patient synovial fluid 20

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF97L


title: Patient synovial fluid 40

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF203L


title: Patient synovial fluid 18

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF95L


title: Patient synovial fluid 36

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF184L


title: Patient synovial fluid 19

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF96L


title: Patient synovial fluid 173

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF645L


title: Patient synovial fluid 14

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF76L


title: Patient synovial fluid 15

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF78L


title: Patient synovial fluid 17

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF88L


title: Patient synovial fluid 13

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF74L


title: Patient synovial fluid 11

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF59L


title: Patient synovial fluid 16

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF80L


title: Patient synovial fluid 12

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF62L


title: Patient synovial fluid 26

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF140L


title: Patient synovial fluid 9

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF56L


title: Patient synovial fluid 33

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF177L


title: Patient synovial fluid 10

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF57L


title: Patient synovial fluid 5

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF35L


title: Patient synovial fluid 8

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF55L


title: Patient synovial fluid 7

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF39L


title: Patient synovial fluid 4

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF33L


title: Patient synovial fluid 23

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF114L


title: Patient synovial fluid 3

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF32L


title: Patient synovial fluid 2

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF23L


title: Patient synovial fluid 1

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF16L


title: Patient plasma 413

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL_Wk5_lateOA-1068

source_name: plasma

value: plasma


title: Patient plasma 414

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL_Wk5_lateOA-1140


title: Patient plasma 412

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL_Wk4_lateOA-1057R


title: Patient plasma 411

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL_Wk5_lateOA-1033


title: Patient plasma 409

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL_Wk5_lateOA-929


title: Patient plasma 407

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL_Wk4_lateOA-904


title: Patient plasma 406

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL_Wk4_lateOA-903


title: Patient plasma 405

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL_Wk5_lateOA-875


title: Patient plasma 404

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL_Wk4_lateOA-854


title: Patient plasma 402

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL_Wk5_lateOA-754


title: Patient plasma 403

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL_Wk5_lateOA-784


title: Patient synovial fluid 6

description:
2023_Match414_3biofluids_miRNA_counts.tsv
SF36L


title: Patient plasma 400

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL_Wk4_lateOA-675


title: Patient plasma 401

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL_Wk5_lateOA-748


title: Patient plasma 398

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL_Wk2_lateOA-419


title: Patient plasma 397

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL_Wk2_lateOA-411


title: Patient plasma 399

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL_Wk3_lateOA-425


title: Patient plasma 395

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL_Wk1_lateOA-324


title: Patient plasma 396

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL_Wk2_lateOA-370


title: Patient plasma 393

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL_Wk2_lateOA-280


title: Patient plasma 392

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL_Wk4_lateOA-138R


title: Patient plasma 390

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL_Wk1_lateOA-44


title: Patient plasma 394

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL_Wk2_lateOA-305


title: Patient plasma 391

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL_Wk1_lateOA-100


title: Patient plasma 388

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL1310L3


title: Patient plasma 387

description:
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PL1304L3


title: Patient plasma 389

description:
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PL_Wk1_lateOA-25


title: Patient plasma 410

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL_Wk4_lateOA-998


title: Patient plasma 384

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL1279L3


title: Patient plasma 383

description:
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PL1271L3


title: Patient plasma 386

description:
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PL1286L3


title: Patient plasma 385

description:
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PL1281L3


title: Patient plasma 382

description:
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PL1266L3


title: Patient plasma 381

description:
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PL1260L3


title: Patient plasma 408

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL_Wk4_lateOA-927


title: Patient plasma 380

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL1254L3


title: Patient plasma 379

description:
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PL1251L3


title: Patient plasma 378

description:
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PL1244L3


title: Patient plasma 377

description:
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PL1233L3


title: Patient plasma 376

description:
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PL1231L3


title: Patient plasma 375

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL1227L3


title: Patient plasma 374

description:
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PL1226L3


title: Patient plasma 373

description:
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PL1223L3


title: Patient plasma 372

description:
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PL1217L3


title: Patient plasma 371

description:
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PL1215L3


title: Patient plasma 370

description:
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PL1209L3


title: Patient plasma 368

description:
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PL1206L3


title: Patient plasma 369

description:
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PL1208L3


title: Patient plasma 367

description:
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PL1204L3


title: Patient plasma 365

description:
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PL1194L3


title: Patient plasma 362

description:
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PL1186L3


title: Patient plasma 361

description:
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PL1185L3


title: Patient plasma 359

description:
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PL1174L3


title: Patient plasma 360

description:
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PL1182L3


title: Patient plasma 363

description:
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PL1189L3


title: Patient plasma 356

description:
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PL1171L3


title: Patient plasma 358

description:
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PL1173L3


title: Patient plasma 357

description:
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PL1172L3


title: Patient plasma 353

description:
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PL1158L3


title: Patient plasma 355

description:
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PL1170L3


title: Patient plasma 354

description:
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PL1165L3


title: Patient plasma 352

description:
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PL1157L3


title: Patient plasma 351

description:
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PL1155L3


title: Patient plasma 366

description:
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PL1195L3


title: Patient plasma 364

description:
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PL1191L3


title: Patient plasma 350

description:
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PL1147L3


title: Patient plasma 347

description:
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PL1143L3


title: Patient plasma 346

description:
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PL1132L3


title: Patient plasma 345

description:
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PL1128L3


title: Patient plasma 344

description:
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PL1122L3


title: Patient plasma 343

description:
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PL1119L3


title: Patient plasma 348

description:
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PL1145L3


title: Patient plasma 341

description:
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PL1108L3


title: Patient plasma 342

description:
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PL1117L3


title: Patient plasma 339

description:
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PL1105L3


title: Patient plasma 338

description:
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PL1103L3


title: Patient plasma 337

description:
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PL1102L3


title: Patient plasma 349

description:
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PL1146L3


title: Patient plasma 335

description:
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PL1096L3


title: Patient plasma 336

description:
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PL1101L3


title: Patient plasma 340

description:
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PL1106L3


title: Patient plasma 333

description:
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PL1090L3


title: Patient plasma 334

description:
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PL1092L3


title: Patient plasma 331

description:
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PL1082L3


title: Patient plasma 330

description:
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PL1077L3


title: Patient plasma 329

description:
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PL1066L3


title: Patient plasma 328

description:
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PL1065L3


title: Patient plasma 325

description:
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PL1058L3


title: Patient plasma 327

description:
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PL1064L3


title: Patient plasma 326

description:
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PL1060L3


title: Patient plasma 323

description:
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PL1046L3


title: Patient plasma 320

description:
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PL1019L3


title: Patient plasma 322

description:
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PL1044L3


title: Patient plasma 321

description:
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PL1029L3


title: Patient plasma 324

description:
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PL1054L3


title: Patient plasma 318

description:
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PL1011L3


title: Patient plasma 316

description:
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PL988L3


title: Patient plasma 317

description:
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PL1001L3


title: Patient plasma 315

description:
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PL985L3


title: Patient plasma 313

description:
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PL982L3


title: Patient plasma 312

description:
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PL970L3


title: Patient plasma 332

description:
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PL1089L3


title: Patient plasma 311

description:
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PL966L3


title: Patient plasma 310

description:
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PL964L3


title: Patient plasma 308

description:
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PL957L3


title: Patient plasma 307

description:
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PL948L3


title: Patient plasma 305

description:
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PL897L3


title: Patient plasma 304

description:
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PL891L3


title: Patient plasma 303

description:
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PL887L3


title: Patient plasma 302

description:
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PL876L3


title: Patient plasma 306

description:
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PL944L3


title: Patient plasma 319

description:
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PL1015L3


title: Patient plasma 299

description:
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PL860L3


title: Patient plasma 300

description:
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PL867L3


title: Patient plasma 296

description:
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PL836L3


title: Patient plasma 297

description:
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PL841L3


title: Patient plasma 294

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL817L3


title: Patient plasma 292

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL777L3


title: Patient plasma 293

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL810L3


title: Patient plasma 291

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL767L3


title: Patient plasma 298

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL850L3


title: Patient plasma 295

description:
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PL826L3


title: Patient plasma 290

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL720L3


title: Patient plasma 314

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL984L3


title: Patient plasma 288

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL640L3


title: Patient plasma 289

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL667L3


title: Patient plasma 309

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL961L3


title: Patient plasma 284

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL473L3


title: Patient plasma 286

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL537L3


title: Patient plasma 283

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL391L3


title: Patient plasma 282

description:
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PL327L3


title: Patient plasma 281

description:
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PL277L3


title: Patient plasma 301

description:
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PL874L3


title: Patient plasma 279

description:
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PL145L3


title: Patient plasma 277

description:
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PL86L3


title: Patient plasma 275

description:
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PL943L3


title: Patient plasma 278

description:
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PL139L3


title: Patient plasma 274

description:
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PL913L3


title: Patient plasma 273

description:
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PL900L3


title: Patient plasma 271

description:
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PL885L3


title: Patient plasma 272

description:
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PL899L3


title: Patient plasma 265

description:
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PL851L3


title: Patient plasma 266

description:
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PL852L3


title: Patient plasma 267

description:
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PL862L3


title: Patient plasma 264

description:
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PL843L3


title: Patient plasma 263

description:
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PL837L3


title: Patient plasma 269

description:
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PL868L3


title: Patient plasma 262

description:
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PL832L3


title: Patient plasma 268

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL866L3


title: Patient plasma 287

description:
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PL551L3


title: Patient plasma 260

description:
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PL827L3


title: Patient plasma 285

description:
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PL491L3


title: Patient plasma 261

description:
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PL828L3


title: Patient plasma 256

description:
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PL809L3


title: Patient plasma 280

description:
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PL257L3


title: Patient plasma 259

description:
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PL822L3


title: Patient plasma 258

description:
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PL821L3


title: Patient plasma 276

description:
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PL946L3


title: Patient plasma 254

description:
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PL803L3


title: Patient plasma 255

description:
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PL804L3


title: Patient plasma 253

description:
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PL800L3


title: Patient plasma 252

description:
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PL799L3


title: Patient plasma 270

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL869L3


title: Patient plasma 251

description:
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PL791L3


title: Patient plasma 249

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL786L3


title: Patient plasma 248

description:
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PL782L3


title: Patient plasma 246

description:
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PL778L3


title: Patient plasma 245

description:
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PL776L3


title: Patient plasma 243

description:
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PL774L3


title: Patient plasma 240

description:
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PL768L3


title: Patient plasma 238

description:
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PL757L3


title: Patient plasma 244

description:
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PL775L3


title: Patient plasma 241

description:
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PL770L3


title: Patient plasma 236

description:
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PL751L3


title: Patient plasma 242

description:
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PL772L3


title: Patient plasma 235

description:
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PL745L3


title: Patient plasma 257

description:
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PL820L3


title: Patient plasma 239

description:
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PL765L3


title: Patient plasma 234

description:
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PL735L3


title: Patient plasma 233

description:
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PL733L3


title: Patient plasma 250

description:
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PL789L3


title: Patient plasma 229

description:
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PL683L3


title: Patient plasma 230

description:
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PL687L3


title: Patient plasma 237

description:
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PL756L3


title: Patient plasma 227

description:
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PL676L3


title: Patient plasma 225

description:
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PL616L3


title: Patient plasma 224

description:
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PL609L3


title: Patient plasma 232

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL714L3


title: Patient plasma 226

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL617L3


title: Patient plasma 247

description:
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PL780L3


title: Patient plasma 231

description:
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PL697L3


title: Patient plasma 228

description:
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PL677L3


title: Patient plasma 223

description:
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PL582L3


title: Patient plasma 222

description:
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PL569L3


title: Patient plasma 220

description:
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PL507L3


title: Patient plasma 221

description:
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PL545L3


title: Patient plasma 218

description:
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PL478L3


title: Patient plasma 217

description:
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PL464L3


title: Patient plasma 216

description:
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PL462L3


title: Patient plasma 215

description:
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PL455L3


title: Patient plasma 212

description:
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PL412L3


title: Patient plasma 213

description:
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PL431L3


title: Patient plasma 214

description:
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PL447L3


title: Patient plasma 211

description:
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PL357L3


title: Patient plasma 210

description:
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PL336L3


title: Patient plasma 209

description:
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PL331L3


title: Patient plasma 208

description:
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PL328L3


title: Patient plasma 205

description:
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PL292L3


title: Patient plasma 203

description:
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PL245L3


title: Patient plasma 204

description:
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PL286L3


title: Patient plasma 206

description:
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PL310L3


title: Patient plasma 207

description:
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PL326L3


title: Patient plasma 202

description:
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PL216L3


title: Patient plasma 196

description:
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PL51L3


title: Patient plasma 195

description:
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PL29L3


title: Patient plasma 219

description:
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PL500L3


title: Patient plasma 199

description:
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PL164L3


title: Patient plasma 201

description:
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PL195L3


title: Patient plasma 194

description:
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PL732L3


title: Patient plasma 200

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL188L3


title: Patient plasma 198

description:
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PL153L3


title: Patient plasma 193

description:
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PL730L3


title: Patient plasma 191

description:
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PL727L3


title: Patient plasma 190

description:
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PL724L3


title: Patient plasma 189

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL706L3


title: Patient plasma 188

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL705L3


title: Patient plasma 184

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL680L3


title: Patient plasma 186

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL685L3


title: Patient plasma 185

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL682L3


title: Patient plasma 187

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL698L3


title: Patient plasma 183

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL679L3


title: Patient plasma 182

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL678L3


title: Patient plasma 180

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL666L3


title: Patient plasma 181

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL672L3


title: Patient plasma 178

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL662L3


title: Patient plasma 179

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL665L3


title: Patient plasma 177

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL656L3


title: Patient plasma 175

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL647L3


title: Patient plasma 174

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL646L3


title: Patient plasma 192

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL728L3


title: Patient plasma 173

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL645L3


title: Patient plasma 170

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL630L3


title: Patient plasma 171

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL639L3


title: Patient plasma 172

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL641L3


title: Patient plasma 169

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL629L3


title: Patient plasma 168

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL627L3


title: Patient plasma 164

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL618L3


title: Patient plasma 167

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL625L3


title: Patient plasma 197

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL73L3


title: Patient plasma 176

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL654L3


title: Patient plasma 163

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL615L3


title: Patient plasma 161

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL610L3


title: Patient plasma 165

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL619L3


title: Patient plasma 166

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL622L3


title: Patient plasma 162

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL614L3


title: Patient plasma 160

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL607L3


title: Patient plasma 159

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL605L3


title: Patient plasma 158

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL604L3


title: Patient plasma 157

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL598L3


title: Patient plasma 153

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL589L3


title: Patient plasma 155

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL592L3


title: Patient plasma 154

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL590L3


title: Patient plasma 151

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL567L3


title: Patient plasma 150

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL564L3


title: Patient plasma 152

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL586L3


title: Patient plasma 149

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL563L3


title: Patient plasma 146

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL557L3


title: Patient plasma 147

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL560L3


title: Patient plasma 145

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL556L3


title: Patient plasma 144

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL552L3


title: Patient plasma 138

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL536L3


title: Patient plasma 140

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL541L3


title: Patient plasma 141

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL543L3


title: Patient plasma 137

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL535L3


title: Patient plasma 134

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL522L3


title: Patient plasma 143

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL547L3


title: Patient plasma 135

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL529L3


title: Patient plasma 136

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL533L3


title: Patient plasma 133

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL521L3


title: Patient plasma 139

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL538L3


title: wt, hu, input, rep3

city: Vancouver

first: Michael

middle: S.

last: Kobor

state: BC

address: 950 West 28th Avenue

department: Medical Genetics

institute: Centre for Molecular Medicine and Therapeutics / University of British Columbia

library_source: genomic

data_processing:
Read quality was assessed using FastQC (0.11.9) (quality score > 30)
Reads were aligned to the S. cerevisiae reference genome (SaCcer3 R64-3-1) using BWA-mem (MAPQ = 60).
bamCoverage was used to create bigWigs using the following parameters: normalized as bin per million (BPM), paired-end read-extension, keep duplicates, mapping quality minimum of 60, and fragment lengths between 130 - 200 bp (deepTools suite [3.5.4])
Assembly: SaCcer3
Supplementary files format and content: bigWigs

molecule: genomic DNA

organism: Saccharomyces cerevisiae

growth_protocol: Saturated overnight yeast cultures were back diluted to 0.2 OD600 and then grown to 0.6 OD600 in 500 mL of YPD (2% glucose).

extract_protocol:
To isolate nuclei, cells were treated with 25 ul of 20 mg/mL T100 Zymolyase and incubated for 10 minutes at 37°C. The isolated nuclei were digested with 5 U/ml of MNase for 30 minutes at 37°C and then solubilized by passing through a 20-G and 26-G needle four times each. 100 µL of the solubilized chromatin was set aside for the DNA INPUT control, while the remaining sample was incubated with anti-FLAG antibody (40 µg) (Sigma, F3165) coupled to 100 µL of Protein A Dynabeads (Invitrogen) for 16 hours (the H2A.Z immunoprecipitation [IP] sample). DNA fragments were purified from the IP and INPUT samples and underwent 0.6x right side selection using SPRI beads to obtain fragments between 100 - 400 bps in size.
Libraries were prepared using a NEB DNA Ultra II Prep kit

treatment_protocol: 250 mL of culture was collected before (untreated) and after incubation with 200 mM HU for 90 minutes (HU-treated).

tag: cell line

tag: cell type

value: alpha ade LYS

tag: genotype

tag: chip antibody

tag: sample type

value: INPUT

tag: treatment

value: HU 200 mM, 90 min


title: wt, hu, input, rep2


title: Patient plasma 142

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL546L3


title: Patient plasma 156

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL594L3


title: wt, hu, ip, rep3

value: FLAG (Sigma, F3165)

value: IP


title: Patient plasma 132

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL519L3


title: Patient plasma 131

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL515L3


title: wt, hu, ip, rep1


title: wt, hu, ip, rep2


title: Patient plasma 148

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL561L3


title: Patient plasma 128

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL501L3


title: Patient plasma 129

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL504L3


title: wt, input, rep2

value: untreated


title: Patient plasma 127

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL497L3


title: wt, input, rep1


title: Patient plasma 126

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL495L3


title: wt, ip, rep3


title: Patient plasma 125

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL494L3


title: wt, hu, input, rep1


title: wt, ip, rep2


title: wt, ip, rep1


title: htz1swr1, UT, rep4

data_processing:
Read quality was assessed using FastQC (0.11.9) (quality score > 30)
Reads were aligned with the S. cerevisiae reference genome (SaCcer3 R64-3-1) using STAR (Version 2.7.7a) (MAPQ = 255)
Raw read counts for all verified ORFs in the reference genome were quantified using SeqMonk (Version 1.48.1)
Assembly: SaCcer3
Supplementary files format and content: Excel file includes raw counts for each sample

molecule: polyA RNA

growth_protocol: Saturated overnight cultures were initially diluted to 0.2 OD600 in YPD (2% glucose). When the cells reached an OD600 0.5, 7.5 OD units of culture were collected (untreated condition). To collect samples, cells were mixed with methanol (40% final concentration), washed with water, flash frozen in a dry ice bath, and then stored at -80˚C. Schizosaccharomyces pombe cells were spiked-in to achieve a 1:10 ratio with the S. cerevisiae cells

extract_protocol:
Total RNA was then extracted and purified using the RNeasy minikit (Qiagen) following the manufacturer’s instructions
Libraries were generated using the Illumina TruSeq Stranded mRNA kit and then sequenced with the Illumina NextSeq 500 Mid Output kit (150 cycles)

treatment_protocol: HU was added to the remaining cells to a final concentration of 200 mM and incubated for 90 min, after which 7.5 OD units of culture were collected (HU-treated condition).


title: htz1swr1, UT, rep6


title: htz1swr1, UT, rep5


title: Patient plasma 120

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL466L3


title: Patient plasma 122

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL479L3


title: htz1swr1, UT, rep3


title: Patient plasma 130

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL505L3


title: htz1swr1, UT, rep2


title: Patient plasma 118

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL458L3


title: wt, input, rep3


title: Patient plasma 117

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL453L3


title: Patient plasma 116

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL452L3


title: htz1swr1, UT, rep1


title: htz1swr1, HU, rep5


title: htz1swr1, HU, rep6


title: Patient plasma 119

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL459L3


title: Patient plasma 114

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL448L3


title: htz1swr1, HU, rep4


title: htz1swr1, HU, rep3


title: Patient plasma 113

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL445L3


title: Patient plasma 124

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL492L3


title: htz1swr1, HU, rep2


title: Patient plasma 112

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL444L3


title: Patient plasma 123

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL486L3


title: htz1swr1, HU, rep1


title: Patient plasma 121

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL467L3


title: Patient plasma 111

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL443L3


title: swr1, UT, rep6


title: Patient plasma 110

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL440L3


title: swr1, UT, rep5


title: swr1, UT, rep4


title: Patient plasma 109

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL434L3


title: swr1, UT, rep3


title: swr1, UT, rep2


title: Patient plasma 107

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL429L3


title: swr1, UT, rep1


title: Patient plasma 106

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL427L3


title: Patient plasma 105

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL426L3


title: Patient plasma 115

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL449L3


title: swr1, HU, rep6


title: Patient plasma 104

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL416L3


title: swr1, HU, rep4


title: swr1, HU, rep3


title: Patient plasma 101

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL408L3


title: Patient plasma 102

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL413L3


title: Patient plasma 103

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL415L3


title: swr1, HU, rep2


title: Patient plasma 100

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL407L3


title: swr1, HU, rep1


title: htz1, UT, rep6


title: Patient plasma 98

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL402L3


title: htz1, UT, rep5


title: Patient plasma 99

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL403L3


title: Patient plasma 108

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL430L3


title: Patient plasma 97

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL398L3


title: Patient plasma 96

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL396L3


title: htz1, UT, rep4


title: htz1, UT, rep3


title: Patient plasma 95

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL394L3


title: htz1, UT, rep2


title: htz1, UT, rep1


title: Patient plasma 94

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL393L3


title: Patient plasma 93

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL392L3


title: swr1, HU, rep5


title: Patient plasma 90

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL376L3


title: Patient plasma 91

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL378L3


title: Patient plasma 92

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL380L3


title: htz1, HU, rep5


title: htz1, HU, rep6


title: htz1, HU, rep4


title: htz1, HU, rep3


title: Patient plasma 88

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL371L3


title: WT, UT, rep6

value: wild type


title: htz1, HU, rep2


title: htz1, HU, rep1


title: Patient plasma 86

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL354L3


title: Patient plasma 87

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL358L3


title: WT, UT, rep5


title: Patient plasma 85

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL351L3


title: Patient plasma 83

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL345L3


title: WT, UT, rep1


title: WT, UT, rep4


title: WT, UT, rep2


title: Patient plasma 84

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL346L3


title: Patient plasma 89

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL372L3


title: Patient plasma 81

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL339L3


title: WT, HU, rep6


title: WT, UT, rep3


title: Patient plasma 80

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL338L3


title: WT, HU, rep4


title: Patient plasma 82

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL340L3


title: Patient plasma 76

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL322L3


title: Patient plasma 77

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL332L3


title: WT, HU, rep1


title: Patient plasma 78

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL333L3


title: Patient plasma 75

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL319L3


title: WT, HU, rep3


title: esg-Gal4_aub-RNAi_ISCs-EBs_Pe_polyA_rep1

city: Acton

first: Rippei

last: Hayashi

state: Australian Capital Territory

address: 131 Garran Road

department: John Curtin School of Medical Research

country: Australia

institute: The Australian National University

description: polyA selected RNA sequencing from Pe-fed aub-RNAi sorted ISCs/EBs replicate 1

data_processing:
We used both R1 and R2 reads from the 150bp HiSeq paired-end sequencing runs.  Reads were trimmed of the adapters 'AGATCGGAAGAGCACACGTCTGAACTCCAGTCAC' and 'AGATCGGAAGAGCGTCGTGTAGGGAAAGA' at the 3' ends of R1 and R2 reads, respectively, using fastx_clipper (fastx_toolkit, Hannon Lab) with the default setting. Trimmed reads were mapped against the dm6 r6.31 transcriptome combined by a collection of D.melanogaster transposon consensus sequences (Senti et al., 2015 EMBO J, PMID: 26302790) using salmon/1.10.0 using options of --validateMappings --incompatPrior 0.0 --seqBias --gcBias. The output files of salmon (quant.sf) were used for the differential expression analysis of transposon mRNAs. The processed quant.sf files also contain the counts of r6.31 transcriptome.
Assembly: dm6/release 6.31
Supplementary files format and content: *_quant.sf: mRNA counts produced after the mapping by salmon; <transcript Name> <transcript Length> <Effective Length of the transcript> <transcript counts per one million transcripts (TPM)> <Number of mapped Reads>

organism: Drosophila melanogaster

source_name: adult midgut-ISCs_EBs

growth_protocol: Flies were kept at standard conditions at room temperature.

extract_protocol:
Midguts were dissected from 7 - 14 days old females (250 ~ 500 per replicates) in cold PBS after one week of heat-inactivation of Gal80, thus activation of escargot-gal4. After breaking down the tissues by elastase, Intestinal stem cells (ISCs) and Enteroblasts (EBs) were collected by Fluorescence-activated single cell sorting using Red stinger whose expression was driven by escargot-gal4. About 250000 to 750000 cells were collected per replicate.  Total RNA was extracted from collected ISCs/EBs using TRIZOL (Invitrogen) and a residual genomic DNA was removed by DNase I (Thermo Fisher). Oligo-dT magnetic beads (NEB) was used to purify polyA+ RNA.
The RNA-seq library was made from polyA+ RNA using NEB Ultra II Directional RNA library prep kit (NEB). We used the Kapa LongRange DNA polymerase (Sigma) with TruSeq compatible primers to amplify the libraries.

value: adult midgut-ISCs_EBs

value: female

tag: strain

value: Oregon R

value: esg-Gal4 x UAS-GFP; UAS-aub[RNAi] VRDC #106999

value: 7 - 14 days old

tag: condition

value: standard food + Pseudomonas entomophila (Pe)


title: esg-Gal4_aub-RNAi_ISCs-EBs_Pe_polyA_rep2

description: polyA selected RNA sequencing from Pe-fed aub-RNAi sorted ISCs/EBs replicate 2


title: Patient plasma 79

description:
2023_Match414_3biofluids_miRNA_counts.tsv
PL335L3

value: MALE


title: WT, HU, rep2


title: WT, HU, rep5


title: esg-Gal4_aub-RNAi_ISCs-EBs_Sucrose_polyA_rep2

description: polyA selected RNA sequencing from Sucrose-fed aub-RNAi sorted ISCs/EBs replicate 2

value: standard food + Sucrose