title: cell-free DNA from Alzheimer's patient 31


title: cell-free DNA from Alzheimer's patient 30

status: Public on Nov 26 2025

type: other

city: Pamplona

first: Maite

last: Mendioroz

address: Calle Irunlarrea, 3

department: Neuroepigenetics

country: Spain

institute: Miguel Servet Foundation - Navarrabiomed

hyb_protocol: cfDNA was bisulfite converted, restored and hybridized to the Illumina Infinium® MethylationEPIC BeadChip microarray (850 K) using standard Illumina protocols.

scan_protocol: Arrays were imaged using the Illumina HiScan System (Illumina) using standard Illumina protocols.

data_processing:
The EPIC array methylation data were fully preprocessed using the minfi package (v.1.32.0) in the R software environment (v.4.0.2). Normalization was performed using the ssNoob and BMIQ methods.
normalized_beta_values.csv

label: Cy3, Cy5

molecule: other

organism: Homo sapiens

source_name: plasma cell-free DNA

label_protocol: Standard Illumina protocol

extract_protocol: cfDNA was isolated from 2 mL plasma by using QIAmp Circulating Nucleic Acid Kit (QIAGEN, Redwood City, CA, USA), following the manufacturer’s protocol.

tag: tissue

value: plasma cell-free DNA

tag: Sex

value: Male

tag: age

tag: apoe genotype

value: Alzheimer


title: cell-free DNA from Alzheimer's patient 28

value: Female


title: cell-free DNA from Alzheimer's patient 29


title: cell-free DNA from Alzheimer's patient 27


title: cell-free DNA from Alzheimer's patient 26


title: cell-free DNA from Alzheimer's patient 25


title: cell-free DNA from Alzheimer's patient 23


title: cell-free DNA from Alzheimer's patient 24


title: Transplant Patient Blood B cell Double Negative

type: SRA

city: Birmingham

first: Alexander

last: Rosenberg

state: AL

address: 1720 2nd Ave. South

country: USA

institute: University of Alabama at Birmingham

library_source: transcriptomic

data_processing:
Joined paired-end reads were assembled and quality filtered as follows sequences <200bp were removed, sequences with any basepairs with a phred score of <=Q10, >5bp with <=Q20 and >15bp of <=Q30 were removed
Sequences were annotated using IMGT/High-Vquest v3.5.30
Annotated sequences were grouped and assigned "lineageIDs" based on identical V-gene & J-gene annotation, NT_CDR3 length and NT_CDR3 similarity of >85%
Data processinig scripts available at DOI 10.5281/zenodo.8039145
Assembly: IMGT/V-QUEST reference directory release 202243-1
Supplementary files format and content: CSV files of IMGT/High-Vquest annotations from "2_, 4_ & 8_" files with additiional metadata including isotype and lineage grouping IDs

molecule: total RNA

source_name: Blood

extract_protocol:
B cell subsets were sorted directly into lysis buffer (Norgen Single Cell RNA Purification Kit, Cat #51800) with 1% mercaptoethanol, lysates were snap frozen on dry ice and stored at -80°C. Total cellular RNA was extracted from bulk sorted B cell and ASC subsets according to the manufacturer’s protocol.
cDNA preparation was performed (BioRad iScipt, Cat #1708891) per manufacturer’s instructions, and DNA amplicon products where generated using Ig-specific variable and constant gene primers. Samples were indexed (Nextera Index Kit, Illumina), purified, quantitated (KAPPA Library Quantitation Kit, Roche) and pooled into libraries. Following generation, libraries were denatured per manufacturer instructions (Illumina) and loaded onto a 600-cycle V3 MiSEQ cartridge (Illumina) for sequencing.

value: Blood

tag: cell type

value: B cell Double Negative

tag: treatment

value: Transplant


title: Transplant Patient Blood B cell Naïve

value: B cell Naive


title: cell-free DNA from Alzheimer's patient 22


title: cell-free DNA from Alzheimer's patient 21


title: cell-free DNA from Alzheimer's patient 20


title: cell-free DNA from Alzheimer's patient 16


title: cell-free DNA from Alzheimer's patient 19


title: cell-free DNA from Alzheimer's patient 17


title: cell-free DNA from Alzheimer's patient 14


title: cell-free DNA from Alzheimer's patient 15


title: cell-free DNA from Alzheimer's patient 12


title: cell-free DNA from Alzheimer's patient 9


title: cell-free DNA from Alzheimer's patient 10


title: cell-free DNA from Alzheimer's patient 11


title: cell-free DNA from Alzheimer's patient 6


title: cell-free DNA from Alzheimer's patient 8


title: cell-free DNA from Alzheimer's patient 5


title: cell-free DNA from Alzheimer's patient 7


title: cell-free DNA from Alzheimer's patient 4


title: cell-free DNA from healthy control 35

description: cell-free DNA from healthy control 35

value: Control


title: cell-free DNA from Alzheimer's patient 1


title: cell-free DNA from healthy control 34

description: cell-free DNA from healthy control 34


title: cell-free DNA from healthy control 30

description: cell-free DNA from healthy control 30


title: cell-free DNA from healthy control 27

description: cell-free DNA from healthy control 27


title: cell-free DNA from healthy control 29

description: cell-free DNA from healthy control 29


title: cell-free DNA from Alzheimer's patient 13


title: cell-free DNA from Alzheimer's patient 18


title: cell-free DNA from healthy control 31

description: cell-free DNA from healthy control 31


title: cell-free DNA from healthy control 32

description: cell-free DNA from healthy control 32


title: cell-free DNA from healthy control 25

description: cell-free DNA from healthy control 25


title: cell-free DNA from healthy control 23

description: cell-free DNA from healthy control 23


title: cell-free DNA from healthy control 33

description: cell-free DNA from healthy control 33


title: cell-free DNA from healthy control 21

description: cell-free DNA from healthy control 21


title: cell-free DNA from healthy control 28

description: cell-free DNA from healthy control 28


title: cell-free DNA from healthy control 20

description: cell-free DNA from healthy control 20


title: cell-free DNA from healthy control 22

description: cell-free DNA from healthy control 22


title: cell-free DNA from healthy control 17

description: cell-free DNA from healthy control 17


title: cell-free DNA from healthy control 19

description: cell-free DNA from healthy control 19


title: cell-free DNA from healthy control 18

description: cell-free DNA from healthy control 18


title: cell-free DNA from healthy control 16

description: cell-free DNA from healthy control 16


title: cell-free DNA from Alzheimer's patient 3


title: cell-free DNA from healthy control 15

description: cell-free DNA from healthy control 15


title: cell-free DNA from Alzheimer's patient 2


title: cell-free DNA from healthy control 12

description: cell-free DNA from healthy control 12


title: cell-free DNA from healthy control 13

description: cell-free DNA from healthy control 13


title: cell-free DNA from healthy control 11

description: cell-free DNA from healthy control 11


title: cell-free DNA from healthy control 14

description: cell-free DNA from healthy control 14


title: cell-free DNA from healthy control 10

description: cell-free DNA from healthy control 10


title: cell-free DNA from healthy control 7

description: cell-free DNA from healthy control 7


title: cell-free DNA from healthy control 9

description: cell-free DNA from healthy control 9


title: cell-free DNA from healthy control 24

description: cell-free DNA from healthy control 24


title: cell-free DNA from healthy control 5

description: cell-free DNA from healthy control 5


title: cell-free DNA from healthy control 26

description: cell-free DNA from healthy control 26


title: cell-free DNA from healthy control 3

description: cell-free DNA from healthy control 3


title: cell-free DNA from healthy control 1

description: cell-free DNA from healthy control 1


title: cell-free DNA from healthy control 2

description: cell-free DNA from healthy control 2


title: cell-free DNA from healthy control 4

description: cell-free DNA from healthy control 4


title: cell-free DNA from healthy control 6

description: cell-free DNA from healthy control 6


title: KYSE-30 - siRNA SHIP2 replicate #2

city: Anderlecht

first: Louison

last: Descampe

address: Route de Lennik 808

department: IRIBHM

country: Belgium

institute: Université Libre de Bruxelles

description: Library name: RMR20-KYSE30-Si1-2.20

data_processing:
The multiplexed libraries were loaded on a NovaSeq 6000 (Illumina) using a S2 flow cell and sequences were produced using a 200 Cycle Kit.
Paired-end reads were mapped against the human reference genome hg38 using STAR software (version 2.5.3a) to generate read alignments for each sample.
After transcripts assembling, gene level counts were obtained using HTSeq
Assembly: hg38
Supplementary files format and content: Processed_File_KYSE410_KYSE30_siRNA.xlsx

source_name: esophagus

extract_protocol:
RNA extraction was performed using the MicroElute Total RNA kit (Omega Biotek, R6831-02) according to the manufacturer’s recommendations with DNase I digestion protocol on column. RNA quality was checked using a Bioanalyzer 2100 (Agilent technologies).
Indexed cDNA libraries were obtained using the Ovation Solo RNA-Seq System (NuGen) following manufacturer’s recommendations.

value: esophagus

tag: cell line

value: squamous cell carcinoma


title: KYSE-30 - siRNA CTRL replicate #2

description: Library name: RMR18-KYSE30-SiC-2.18

value: siCT


title: KYSE-30 - siRNA CTRL replicate #1

description: Library name: RMR17-KYSE30-SiC-1.17


title: KYSE-30 - siRNA SHIP2 replicate #1

description: Library name: RMR19-KYSE30-Si1-1.19


title: KYSE-410 - siRNA SHIP2 replicate #3

description: Library name: RMR6-KYSE410-si1-3.6


title: KYSE-410 - siRNA SHIP2 replicate #2

description: Library name: RMR5-KYSE410-si1-2.5


title: KYSE-410 - siRNA CTRL replicate #3

description: Library name: RMR3-KYSE410-siC-3.3


title: KYSE-410 - siRNA SHIP2 replicate #1

description: Library name: RMR4-KYSE410-si1-1.4


title: KYSE-410 - siRNA CTRL replicate #2

description: Library name: RMR2-KYSE410-siC-2.2


title: KYSE-410 – SHIP2_KO (H3) replicate #2

description: Library name: RMR10-CRISPR-Ship2-KO-H3-2.10

data_processing:
The multiplexed libraries were loaded on a NovaSeq 6000 (Illumina) using a S2 flow cell and sequences were produced using a 200 Cycle Kit.
Paired-end reads were mapped against the human reference genome hg38 using STAR software (version 2.5.3a) to generate read alignments for each sample.
After transcripts assembling, gene level counts were obtained using HTSeq
Assembly: hg38
Supplementary files format and content: Processed_File_KYSE410_KO.xlsx

tag: genotype

value: SHIP2 KO


title: KYSE-410 – SHIP2_KO (G10) replicate #1

description: Library name: RMR7-CRISPR-Ship2-KO-G10-1.7


title: KYSE-410 – SHIP2_KO (G4) replicate #2

description: Library name: RMR6-CRISPR-Ship2-KO-G4-2.6


title: KYSE-410 – SHIP2_KO (D4) replicate #2

description: Library name: RMR4-CRISPR-Ship2-KO-D4-2.4


title: KYSE-410 – SHIP2_KO (D4) replicate #1

description: Library name: RMR3-CRISPR-Ship2-KO-D4-1.3


title: cell-free DNA from healthy control 8

description: cell-free DNA from healthy control 8


title: KYSE-410 – SHIP2_KO (H3) replicate #1

description: Library name: RMR9-CRISPR-Ship2-KO-H3-1.9


title: KYSE-410 - CTRL (empty) replicate #1

description: Library name: RMR1-Empty-1.1

value: WT (empty vector)


title: KYSE-410 – AS1949490 replicate #1

description: Library name: GBR11-KYSE410-AS-20-48h-2.11

data_processing:
The multiplexed libraries were loaded on a NovaSeq 6000 (Illumina) using a S2 flow cell and sequences were produced using a 200 Cycle Kit.
Paired-end reads were mapped against the human reference genome hg38 using STAR software (version 2.5.3a) to generate read alignments for each sample.
After transcripts assembling, gene level counts were obtained using HTSeq
Assembly: hg38
Supplementary files format and content: Processed_File_KYSE410_K149_AS.xlsx


title: KYSE-410 - CTRL-as (DMSO) replicate #2

description: Library name: GBR2-KYSE410-DMSO-3.2

value: DMSO


title: KYSE-410 - CTRL (empty) replicate #2

description: Library name: RMR2-Empty-2.2


title: KYSE-410 - K149 replicate #3

description: Library name: RMR12-KYSE410-K149-3.12


title: KYSE-410 - K149 replicate #2

description: Library name: RMR11-KYSE410-K149-2.11


title: KYSE-410 - K149 replicate #1

description: Library name: RMR10-KYSE410-K149-1.10


title: KYSE-410 - CTRL-k149 (DMSO) replicate #2

description: Library name: RMR8-KYSE410-DMSO-2.8


title: KYSE-410 - CTRL (DMSO) replicate #3

description: Library name: RMR9-KYSE410-DMSO-3.9


title: KYSE-410 – AS1949490 replicate #2

description: Library name: GBR12-KYSE410-AS-20-48h-3.12


title: KYSE-410 - siRNA CTRL replicate #1

description: Library name: RMR1-KYSE410-siC-1.1


title: Ovarian tumor tissue derived NK cells, first sample smartseq3

city: Huddinge

first: Dhifaf

last: Sarhan

state: Stockholm

address: Alfred Nobels allé 8, floor 8, room 83112

department: Dept. of Laboratory Medicine, Division of Pathology

country: Sweden

institute: Karolinska Institutet

description:
Library name: Sample 1 smartseq 3
Plate based smartseq3

library_source: transcriptomic single cell

data_processing:
Tumor-infiltrating NK cells profiled by Smart-seq2 were integrated with Smart-seq3 datasets  using Seurat (v4.3.0). Metadata were harmonized by adding patient labels and unique cell barcodes. Datasets were merged into a single Seurat object and processed with SCTransform normalization (5,000 variable features, regressing out mitochondrial gene percentage). Principal component analysis (PCA) was performed, and sample-specific differences were assessed by dimensionality plots and violin plots. To account for platform- and patient-related batch effects, Harmony was applied (θ = 2.5), and corrected embeddings were used for downstream analyses. Based on the top 13 Harmony dimensions, we constructed neighborhood graphs and performed non-linear dimensionality reduction with UMAP. Finally, unsupervised clustering was carried out using graph-based methods (resolution = 1.1), allowing joint characterization of NK cell heterogeneity across Smart-seq2 and Smart-seq3 datasets.
Assembly: GRCh38 (hg38)
Supplementary files format and content: Matrices and rds files

source_name: Metastatic ovarian tumor tissue

extract_protocol:
Ovarian tumor samples were obtained from patients enrolled in the Phase III clinical trial Intra-Peritoneal Local Anesthetics in Ovarian Cancer (IPLA-OVCA; NCT04065009), which included patients undergoing upfront cytoreductive surgery for stage III or IV epithelial high-grade serous ovarian cancer (HGSOC)  [28]. All participants provided written informed consent prior to inclusion, in accordance with the Declaration of Helsinki. The study protocol was approved by the local Ethics Committee and Institutional Review Board (Approval numbers: Dnrs 2019-05149/updated as 2020-02888). To get the single cell suspension from ovarian tumors, sections were cut into small pieces and digested using a harvest medium containing DNase I (100 µg/mL) (Sigma Alrich, Cat.#4716728001),and Liberase (150 µg/mL) (Sigma Alrich, Cat. #5401127001) in RPMI medium at 37°C for 30 minutes. After digestion, the cell suspension was collected by passing the tissue through a 70 µm strainer. Red blood cell lysis was then performed, followed by two PBS washes, resulting in a tumor tissue suspension. All tumor suspensions were cryopreserved in 90% FBS and 10% DMSO.
For Smart-seq2, ovarian tumor samples were enzymatically dissociated into single-cell suspensions, and dead cells were removed using the Dead Cell Removal Kit (Miltenyl Biotech, Cat.# 130-090-101). CD45 staining （BD biosciences, Cat. #5555483） was applied to separate CD45⁺ and CD45⁻ populations, which were individually sorted into 384-well plates, with two plates prepared per patient sample. The initial sample processing steps were performed according to the Direct nuclear tagmentation and RNA-sequencing (DNTR-seq) protocol (steps 1–4 and post-step 12)[29]. Cytosolic and nuclear fraction were separated, and only the cytosolic fraction was used in this paper. Primer annealing, reverse transcription and cDNA amplification were performed. cDNA was purified, tagmented and barcoded. Libraries were sequenced with paired-end sequencing, 2x150bp on a novaseq6000. For Smart-seq3, ovarian tumor samples were enzymatically dissociated into single-cell suspensions, and NK cells were isolated by fluorescence-activated cell sorting (FACS) based on surface marker expression of CD45⁺CD3⁻CD56⁺. Sorted NK cells were processed for full-length single-cell RNA sequencing using the Smart-seq3 protocol[32], performed at the Single Cell Core Facility of Flemingsberg Campus (SICOF), Karolinska Institutet. Individual NK cells were index-sorted into 384-well plates preloaded with lysis buffer containing oligo-dT primers, dNTPs, RNase inhibitors, and ERCC spike-ins. Reverse transcription was carried out using a template-switching oligonucleotide (TSO), enabling capture of full-length transcripts along with incorporation of unique molecular identifiers (UMIs) for absolute quantification. After reverse transcription and pre-amplification, cDNA was tagmented using Tn5 transposase and subjected to PCR amplification with indexed primers to generate sequencing-ready libraries. Libraries were sequenced on an Illumina NovaSeq 6000 system using paired-end mode, targeting a sequencing depth of approximately 0.5–1 million reads per cell. Raw sequencing data were processed by the core facility using the standard Smart-seq3 pipeline. Briefly, reads were demultiplexed, and UMI-aware alignment was performed using STAR (v2.7.7a) to the human reference genome (hg38). Gene-level quantification was conducted using HTSeq (v 0.9.1), taking into account transcript start sites and UMI counts to reduce amplification bias. Cells with low library complexity, excessive mitochondrial gene expression, or low total UMI counts were excluded from downstream analysis. The final expression matrix was used for dimensionality reduction, clustering, and regulatory network analysis.

value: Metastatic ovarian tumor tissue

value: Primary NK cells


title: KYSE-410 - CTRL-as (DMSO) replicate #1

description: Library name: GBR1-KYSE410-DMSO-1.1


title: Ovarian tumor tissue derived NK cells, second sample smartseq3

description:
Library name: Sample 2 smartseq 3
Plate based smartseq3


title: KYSE-410 – SHIP2_KO (G10) replicate #2

description: Library name: RMR8-CRISPR-Ship2-KO-G10-2.8


title: Ovarian tumor tissue, five samples combined smartseq2

description:
Library name: Combined_samples_smartseq2
Plate based smartseq2

value: Primary CD45+ and CD45- cells


title: KYSE-410 - CTRL-k149 (DMSO) replicate #1

description: Library name: RMR7-KYSE410-DMSO-1.7


title: Plasma microRNA-Seq (external ID KP066)

city: Riga

first: Evija

last: Kanašniece

address: Dzirciema street 16

country: Latvia

institute: Riga Stradins University

description:
Library name: KP066
EDTA plasma sample from a participant with late-onset coronary artery disease; CeGaT ID S8141Nr83, external ID KP066.

data_processing:
Base calling and demultiplexing of raw sequencing data were performed with Illumina bcl2fastq (version 2.20) to generate per-sample FASTQ files according to the supplied index sequences.
Adapter sequences were removed with Skewer v0.2.2; no additional quality trimming was applied. Read quality was assessed using FastQC and summarized with MultiQC.
To remove remaining adapter sequence fragments and filter reads by length, miRDeep2 (version 2.0.1.3) was used. Only reads consistent with the expected miRNA length (18 nt) were retained for further analysis.
Reads were aligned to the human genome with Bowtie v1.0.0 within the miRDeep2 pipeline, using GRCh38.p13 and miRBase v22.1 mature and hairpin miRNA reference sequences for miRNA identification and quantification.
For each sample, miRNA-level read counts were extracted from the miRDeep2 output. Where multiple precursors corresponded to the same mature miRNA, median read counts were calculated to correct for redundancy. Low-abundance miRNAs were filtered (median count ≥10 in at least one group).
Assembly: Human reference genome GRCh38.p13 (Ensembl) with mature and hairpin miRNA annotations from miRBase release 22.1.
Supplementary files format and content: comma-separated file includes raw counts for each Sample

source_name: blood plasma

extract_protocol:
Peripheral venous blood was collected into EDTA tubes, centrifuged at 4 °C to separate plasma, and supernatant aliquots were stored at −80 °C. Total RNA enriched for miRNAs was isolated from plasma using Qiagen miRNeasy Serum/Plasma (CeGaT projects S7504, S8141) or miRNeasy Serum/Plasma Advanced kits (S10467) according to the manufacturer’s protocol.
Small RNA libraries were prepared from plasma-derived RNA using commercial microRNA library preparation kits. For CeGaT projects S7504 and S8141, the NEXTFlex Small RNA-Seq v3 kit (Bioo Scientific) was used with the maximum possible RNA input per sample (up to approximately 10.5 µl). For CeGaT project S10467, libraries were prepared with the QIAseq miRNA Library Kit (Qiagen) using up to 5 µl RNA input. Library preparation followed the manufacturers’ protocols and included 3′ and 5′ adaptor ligation to small RNAs, reverse transcription, PCR amplification with indexed primers, and size selection to enrich fragments corresponding to adapter-ligated microRNAs. Final libraries were quantified, quality-controlled by fragment analysis and pooled equimolarly. Sequencing was performed on an Illumina NovaSeq 6000 platform with single-end reads (1 × 51 bp or 1 × 72 bp, depending on the sequencing run).

treatment_protocol: No experimental treatment was applied; patients received standard clinical care, and fasting blood was drawn before or 24 h after heparin administration.

value: blood plasma

value: male

tag: disease state

value: late-onset CAD

tag: batch


title: Plasma microRNA-Seq (external ID KP079)

description:
Library name: KP079
EDTA plasma sample from a participant with late-onset coronary artery disease; CeGaT ID S8141Nr106, external ID KP079.

value: female


title: Plasma microRNA-Seq (external ID KP076)

description:
Library name: KP076
EDTA plasma sample from a participant with late-onset coronary artery disease; CeGaT ID S8141Nr16, external ID KP076.


title: KYSE-410 – SHIP2_KO (G4) replicate #1

description: Library name: RMR5-CRISPR-Ship2-KO-G4-1.5


title: Plasma microRNA-Seq (external ID KP060)

description:
Library name: KP060
EDTA plasma sample from a participant with late-onset coronary artery disease; CeGaT ID S8141Nr61, external ID KP060.


title: Plasma microRNA-Seq (external ID KP064)

description:
Library name: KP064
EDTA plasma sample from a participant with late-onset coronary artery disease; CeGaT ID S8141Nr81, external ID KP064.


title: Plasma microRNA-Seq (external ID KP058)

description:
Library name: KP058
EDTA plasma sample from a participant with late-onset coronary artery disease; CeGaT ID S8141Nr59, external ID KP058.


title: Plasma microRNA-Seq (external ID KP065)

description:
Library name: KP065
EDTA plasma sample from a participant with late-onset coronary artery disease; CeGaT ID S8141Nr82 and duplicate CeGaT ID S8141Nr28, external ID KP065.


title: Plasma microRNA-Seq (external ID KP062)

description:
Library name: KP062
EDTA plasma sample from a participant with late-onset coronary artery disease; CeGaT ID S8141Nr63, external ID KP062.


title: Plasma microRNA-Seq (external ID KP074)

description:
Library name: KP074
EDTA plasma sample from a participant with late-onset coronary artery disease; CeGaT ID S8141Nr13, external ID KP074.


title: Plasma microRNA-Seq (external ID KP055)

description:
Library name: KP055
EDTA plasma sample from a participant with late-onset coronary artery disease; CeGaT ID S8141Nr40, external ID KP055.


title: Plasma microRNA-Seq (external ID KP056)

description:
Library name: KP056
EDTA plasma sample from a participant with late-onset coronary artery disease; CeGaT ID S8141Nr41, external ID KP056.


title: Plasma microRNA-Seq (external ID KP063)

description:
Library name: KP063
EDTA plasma sample from a participant with late-onset coronary artery disease; CeGaT ID S8141Nr80, external ID KP063.


title: Plasma microRNA-Seq (external ID KP054)

description:
Library name: KP054
EDTA plasma sample from a participant with late-onset coronary artery disease; CeGaT ID S8141Nr39, external ID KP054.


title: Plasma microRNA-Seq (external ID KP057)

description:
Library name: KP057
EDTA plasma sample from a participant with late-onset coronary artery disease; CeGaT ID S8141Nr58, external ID KP057.


title: Plasma microRNA-Seq (external ID KP053)

description:
Library name: KP053
EDTA plasma sample from a participant with late-onset coronary artery disease; CeGaT ID S8141Nr38, external ID KP053.


title: Plasma microRNA-Seq (external ID KP052)

description:
Library name: KP052
EDTA plasma sample from a participant with late-onset coronary artery disease; CeGaT ID S8141Nr37, external ID KP052.


title: Plasma microRNA-Seq (external ID KP0411)

description:
Library name: KP0411
EDTA plasma sample from a participant with late-onset coronary artery disease; CeGaT ID S8141Nr102, external ID KP0411.


title: Plasma microRNA-Seq (external ID KP0391)

description:
Library name: KP0391
EDTA plasma sample from a participant with late-onset coronary artery disease; CeGaT ID S8141Nr85, external ID KP0391.


title: Plasma microRNA-Seq (external ID KP075)

description:
Library name: KP075
EDTA plasma sample from a participant with late-onset coronary artery disease; CeGaT ID S8141Nr27, external ID KP075.


title: Plasma microRNA-Seq (external ID KP0381)

description:
Library name: KP0381
EDTA plasma sample from a participant with late-onset coronary artery disease; CeGaT ID S8141Nr103, external ID KP0381.


title: Plasma microRNA-Seq (external ID KP0361)

description:
Library name: KP0361
EDTA plasma sample from a participant with late-onset coronary artery disease; CeGaT ID S8141Nr14, external ID KP0361.


title: Plasma microRNA-Seq (external ID KP0371)

description:
Library name: KP0371
EDTA plasma sample from a participant with late-onset coronary artery disease; CeGaT ID S8141Nr15, external ID KP0371.


title: Plasma microRNA-Seq (external ID KP0321)

description:
Library name: KP0321
EDTA plasma sample from a participant with late-onset coronary artery disease; CeGaT ID S8141Nr104, external ID KP0321.


title: Plasma microRNA-Seq (external ID KP0281)

description:
Library name: KP0281
EDTA plasma sample from a participant with late-onset coronary artery disease; CeGaT ID S8141Nr12, external ID KP0281.


title: Plasma microRNA-Seq (external ID KP0331)

description:
Library name: KP0331
EDTA plasma sample from a participant with late-onset coronary artery disease; CeGaT ID S8141Nr11, external ID KP0331.


title: Plasma microRNA-Seq (external ID KP061)

description:
Library name: KP061
EDTA plasma sample from a participant with late-onset coronary artery disease; CeGaT ID S8141Nr62, external ID KP061.


title: Plasma microRNA-Seq (external ID KGKONTR42)

description:
Library name: KGKONTR42
EDTA plasma sample from a participant with control without angiographic coronary artery disease; CeGaT ID S8141Nr43, external ID KGKONTR42.

value: control


title: Plasma microRNA-Seq (external ID KP0271)

description:
Library name: KP0271
EDTA plasma sample from a participant with late-onset coronary artery disease; CeGaT ID S8141Nr105, external ID KP0271.


title: Plasma microRNA-Seq (external ID KGKONTR16)

description:
Library name: KGKONTR16
EDTA plasma sample from a participant with control without angiographic coronary artery disease; CeGaT ID S8141Nr21, external ID KGKONTR16.


title: Plasma microRNA-Seq (external ID KGKONTR23)

description:
Library name: KGKONTR23
EDTA plasma sample from a participant with control without angiographic coronary artery disease; CeGaT ID S8141Nr108, external ID KGKONTR17.


title: Plasma microRNA-Seq (external ID KGKONTR39)

description:
Library name: KGKONTR39
EDTA plasma sample from a participant with control without angiographic coronary artery disease; CeGaT ID S8141Nr86, external ID KGKONTR39.


title: Plasma microRNA-Seq (external ID KG96)

description:
Library name: KG96
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr101, external ID KG96.

value: early-onset CAD


title: Plasma microRNA-Seq (external ID KG94)

description:
Library name: KG94
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr99, external ID KG94.


title: Plasma microRNA-Seq (external ID KG95)

description:
Library name: KG95
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr100, external ID KG95.


title: Plasma microRNA-Seq (external ID KG93)

description:
Library name: KG93
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr98, external ID KG93.


title: Plasma microRNA-Seq (external ID KGKONTR17)

description:
Library name: KGKONTR17
EDTA plasma sample from a participant with control without angiographic coronary artery disease; CeGaT ID S8141Nr108, external ID KGKONTR17.


title: Plasma microRNA-Seq (external ID KG92)

description:
Library name: KG92
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr97, external ID KG92.


title: Plasma microRNA-Seq (external ID KG89)

description:
Library name: KG89
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr95, external ID KG89.


title: Plasma microRNA-Seq (external ID KG91)

description:
Library name: KG91
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr96, external ID KG91.


title: Plasma microRNA-Seq (external ID KG87)

description:
Library name: KG87
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr94, external ID KG87.


title: Plasma microRNA-Seq (external ID KG85)

description:
Library name: KG85
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr92, external ID KG85.


title: Plasma microRNA-Seq (external ID KG81)

description:
Library name: KG81
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr89, external ID KG81.


title: Plasma microRNA-Seq (external ID KG83)

description:
Library name: KG83
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr90, external ID KG83.


title: Plasma microRNA-Seq (external ID KG84)

description:
Library name: KG84
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr91, external ID KG84.


title: Plasma microRNA-Seq (external ID KG80)

description:
Library name: KG80
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr79, external ID KG80.


title: Plasma microRNA-Seq (external ID KG79)

description:
Library name: KG79
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr78, external ID KG79.


title: Plasma microRNA-Seq (external ID KG78)

description:
Library name: KG78
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr77, external ID KG78.


title: Plasma microRNA-Seq (external ID KG76)

description:
Library name: KG76
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr75, external ID KG76.


title: Plasma microRNA-Seq (external ID KP0261)

description:
Library name: KP0261
EDTA plasma sample from a participant with late-onset coronary artery disease; CeGaT ID S8141Nr84, external ID KP0261.


title: Plasma microRNA-Seq (external ID KG73)

description:
Library name: KG73
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr72, external ID KG73.


title: Plasma microRNA-Seq (external ID KG75)

description:
Library name: KG75
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr74, external ID KG75.


title: Plasma microRNA-Seq (external ID KG74)

description:
Library name: KG74
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr73, external ID KG74.


title: Plasma microRNA-Seq (external ID KG72)

description:
Library name: KG72
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr71, external ID KG72.


title: Plasma microRNA-Seq (external ID KG71)

description:
Library name: KG71
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr70, external ID KG71.


title: Plasma microRNA-Seq (external ID KG69)

description:
Library name: KG69
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr68, external ID KG69.


title: Plasma microRNA-Seq (external ID KG67)

description:
Library name: KG67
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr66, external ID KG67.


title: Plasma microRNA-Seq (external ID KG68)

description:
Library name: KG68
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr67, external ID KG68.


title: Plasma microRNA-Seq (external ID KG66)

description:
Library name: KG66
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr65, external ID KG66.


title: Plasma microRNA-Seq (external ID KG64)

description:
Library name: KG64
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr57, external ID KG64.


title: Plasma microRNA-Seq (external ID KG63)

description:
Library name: KG63
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr56, external ID KG63.


title: Plasma microRNA-Seq (external ID KG62)

description:
Library name: KG62
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr55, external ID KG62.


title: Plasma microRNA-Seq (external ID KG86)

description:
Library name: KG86
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr93, external ID KG86.


title: Plasma microRNA-Seq (external ID KG65)

description:
Library name: KG65
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr26, external ID KG65.


title: Plasma microRNA-Seq (external ID KG59)

description:
Library name: KG59
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr53, external ID KG59.


title: Plasma microRNA-Seq (external ID KG55)

description:
Library name: KG55
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr10 and duplicate CeGaT ID S8141Nr20, external ID KG55.


title: Plasma microRNA-Seq (external ID KG57)

description:
Library name: KG57
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr51, external ID KG57.


title: Plasma microRNA-Seq (external ID KG58)

description:
Library name: KG58
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr52, external ID KG58.


title: Plasma microRNA-Seq (external ID KG77)

description:
Library name: KG77
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr76, external ID KG77.


title: Plasma microRNA-Seq (external ID KG52)

description:
Library name: KG52
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr49, external ID KG52.


title: Plasma microRNA-Seq (external ID KG53)

description:
Library name: KG53
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr9 and duplicate CeGaT ID S8141Nr19, external ID KG53.


title: Plasma microRNA-Seq (external ID KG49)

description:
Library name: KG49
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr8 and duplicate CeGaT ID S8141Nr18, external ID KG49.


title: Plasma microRNA-Seq (external ID KG47)

description:
Library name: KG47
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr24 and duplicate CeGaT ID S8141Nr29, external ID KG47.


title: Plasma microRNA-Seq (external ID KG51)

description:
Library name: KG51
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr48, external ID KG51.


title: Plasma microRNA-Seq (external ID KG48)

description:
Library name: KG48
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr46, external ID KG48.


title: Plasma microRNA-Seq (external ID KG44)

description:
Library name: KG44
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr45, external ID KG44.


title: Plasma microRNA-Seq (external ID KG43)

description:
Library name: KG43
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr44, external ID KG43.


title: Plasma microRNA-Seq (external ID KG45)

description:
Library name: KG45
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr7 and duplicate CeGaT ID S8141Nr22, external ID KG45.


title: Plasma microRNA-Seq (external ID KG40)

description:
Library name: KG40
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr6, external ID KG40.


title: Plasma microRNA-Seq (external ID KG70)

description:
Library name: KG70
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr69, external ID KG70.


title: Plasma microRNA-Seq (external ID KG61)

description:
Library name: KG61
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr25 and duplicate CeGaT ID S8141Nr36, external ID KG61.


title: Plasma microRNA-Seq (external ID KG41)

description:
Library name: KG41
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr23, external ID KG41.


title: Plasma microRNA-Seq (external ID KG38)

description:
Library name: KG38
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr4, external ID KG38.


title: Plasma microRNA-Seq (external ID KG60)

description:
Library name: KG60
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr54, external ID KG60.


title: Plasma microRNA-Seq (external ID KG39)

description:
Library name: KG39
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr5, external ID KG39.


title: Plasma microRNA-Seq (external ID KG32)

description:
Library name: KG32
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr107, external ID KG32.


title: Plasma microRNA-Seq (external ID KG35)

description:
Library name: KG35
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr1, external ID KG35.


title: Plasma microRNA-Seq (external ID KG54)

description:
Library name: KG54
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr50, external ID KG54.


title: Plasma microRNA-Seq (external ID KG36)

description:
Library name: KG36
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr2, external ID KG36.


title: Plasma microRNA-Seq (external ID KG27)

description:
Library name: KG27
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S7504Nr19, external ID KG27.


title: Plasma microRNA-Seq (external ID KG26)

description:
Library name: KG26
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S7504Nr17, external ID KG26.


title: Plasma microRNA-Seq (external ID KG50)

description:
Library name: KG50
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr47, external ID KG50.


title: Plasma microRNA-Seq (external ID KG24)

description:
Library name: KG24
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S7504Nr15 and duplicate CeGaT ID S8141Nr32, external ID KG24.


title: Plasma microRNA-Seq (external ID KG25)

description:
Library name: KG25
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S7504Nr16, external ID KG25.


title: Plasma microRNA-Seq (external ID KG23)

description:
Library name: KG23
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S7504Nr14, external ID KG23.


title: Plasma microRNA-Seq (external ID KG30)

description:
Library name: KG30
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S7504Nr21, external ID KG30.


title: Plasma microRNA-Seq (external ID KG34)

description:
Library name: KG34
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr87, external ID KG34.


title: Plasma microRNA-Seq (external ID KG21)

description:
Library name: KG21
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S7504Nr12, external ID KG21.


title: Plasma microRNA-Seq (external ID KG20)

description:
Library name: KG20
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S7504Nr11, external ID KG20.


title: Plasma microRNA-Seq (external ID KG22)

description:
Library name: KG22
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S7504Nr13, external ID KG22.


title: Plasma microRNA-Seq (external ID KG42)

description:
Library name: KG42
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr88, external ID KG42.


title: Plasma microRNA-Seq (external ID KG18)

description:
Library name: KG18
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S7504Nr9 and duplicate CeGaT ID S8141Nr33, external ID KG18.


title: Plasma microRNA-Seq (external ID KG16)

description:
Library name: KG16
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S7504Nr7 and duplicate CeGaT ID S8141Nr31, external ID KG16.


title: Plasma microRNA-Seq (external ID KG31)

description:
Library name: KG31
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S7504Nr22 and duplicate CeGaT ID S8141Nr35, external ID KG31.


title: Plasma microRNA-Seq (external ID KG19)

description:
Library name: KG19
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S7504Nr10, external ID KG19.


title: Plasma microRNA-Seq (external ID KG14)

description:
Library name: KG14
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S7504Nr5, external ID KG14.


title: Plasma microRNA-Seq (external ID KG13)

description:
Library name: KG13
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S7504Nr4, external ID KG13.


title: Plasma microRNA-Seq (external ID KG15)

description:
Library name: KG15
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S7504Nr6, external ID KG15.


title: Plasma microRNA-Seq (external ID KG37)

description:
Library name: KG37
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S8141Nr3, external ID KG37.


title: Plasma microRNA-Seq (external ID KG11)

description:
Library name: KG11
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S7504Nr2 and duplicate CeGaT ID S8141Nr17, external ID KG11.


title: Plasma microRNA-Seq (external ID KG12)

description:
Library name: KG12
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S7504Nr3, external ID KG12.


title: Plasma microRNA-Seq (external ID KG07)

description:
Library name: KG07
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S7504Nr18, external ID KG07.


title: Plasma microRNA-Seq (external ID KG10)

description:
Library name: KG10
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S7504Nr1, external ID KG10.


title: Plasma microRNA-Seq (external ID 2K1)

description:
Library name: 2K1
EDTA plasma sample from a participant with control without angiographic coronary artery disease; CeGaT ID S10467Nr26, external ID 2K1.


title: Plasma microRNA-Seq (external ID 31K4)

description:
Library name: 31K4
EDTA plasma sample from a participant with control without angiographic coronary artery disease; CeGaT ID S10467Nr22, external ID 31K4.


title: Plasma microRNA-Seq (external ID 27K7)

description:
Library name: 27K7
EDTA plasma sample from a participant with control without angiographic coronary artery disease; CeGaT ID S10467Nr20, external ID 27K7.


title: Plasma microRNA-Seq (external ID 2K4)

description:
Library name: 2K4
EDTA plasma sample from a participant with control without angiographic coronary artery disease; CeGaT ID S10467Nr28, external ID 2K4.


title: Plasma microRNA-Seq (external ID 27K5)

description:
Library name: 27K5
EDTA plasma sample from a participant with control without angiographic coronary artery disease; CeGaT ID S10467Nr19, external ID 27K5.


title: Plasma microRNA-Seq (external ID 27K3)

description:
Library name: 27K3
EDTA plasma sample from a participant with control without angiographic coronary artery disease; CeGaT ID S10467Nr18, external ID 27K3.


title: Plasma microRNA-Seq (external ID 27K2)

description:
Library name: 27K2
EDTA plasma sample from a participant with control without angiographic coronary artery disease; CeGaT ID S10467Nr17, external ID 27K2.


title: Plasma microRNA-Seq (external ID 23.11.K1)

description:
Library name: 23.11.K1
EDTA plasma sample from a participant with control without angiographic coronary artery disease; CeGaT ID S10467Nr34, external ID 23.11.K1.


title: Plasma microRNA-Seq (external ID 24K1)

description:
Library name: 24K1
EDTA plasma sample from a participant with control without angiographic coronary artery disease; CeGaT ID S10467Nr13, external ID 24K1.


title: Plasma microRNA-Seq (external ID 26K1)

description:
Library name: 26K1
EDTA plasma sample from a participant with control without angiographic coronary artery disease; CeGaT ID S10467Nr15, external ID 26K1.


title: Plasma microRNA-Seq (external ID 22.11.K3)

description:
Library name: 22.11.K3
EDTA plasma sample from a participant with control without angiographic coronary artery disease; CeGaT ID S10467Nr33, external ID 22.11.K3.


title: Plasma microRNA-Seq (external ID 22.11.K2)

description:
Library name: 22.11.K2
EDTA plasma sample from a participant with control without angiographic coronary artery disease; CeGaT ID S10467Nr32, external ID 22.11.K2.


title: Plasma microRNA-Seq (external ID KG17)

description:
Library name: KG17
EDTA plasma sample from a participant with early-onset coronary artery disease; CeGaT ID S7504Nr8 and duplicate CeGaT ID S8141Nr34, external ID KG17.


title: Plasma microRNA-Seq (external ID 25K1)

description:
Library name: 25K1
EDTA plasma sample from a participant with control without angiographic coronary artery disease; CeGaT ID S10467Nr14, external ID 25K1.


title: Plasma microRNA-Seq (external ID 20K2)

description:
Library name: 20K2
EDTA plasma sample from a participant with control without angiographic coronary artery disease; CeGaT ID S10467Nr10, external ID 20K2.


title: Plasma microRNA-Seq (external ID 16.11.K2)

description:
Library name: 16.11.K2
EDTA plasma sample from a participant with control without angiographic coronary artery disease; CeGaT ID S10467Nr31, external ID 16.11.K2.


title: Plasma microRNA-Seq (external ID 20K1)

description:
Library name: 20K1
EDTA plasma sample from a participant with control without angiographic coronary artery disease; CeGaT ID S10467Nr9, external ID 20K1.


title: Plasma microRNA-Seq (external ID 12K2)

description:
Library name: 12K2
EDTA plasma sample from a participant with control without angiographic coronary artery disease; CeGaT ID S10467Nr6, external ID 12K2.


title: Plasma microRNA-Seq (external ID 12K3)

description:
Library name: 12K3
EDTA plasma sample from a participant with control without angiographic coronary artery disease; CeGaT ID S10467Nr7, external ID 12K3.


title: Plasma microRNA-Seq (external ID 16.11.K1)

description:
Library name: 16.11.K1
EDTA plasma sample from a participant with control without angiographic coronary artery disease; CeGaT ID S10467Nr30, external ID 16.11.K1.


title: Plasma microRNA-Seq (external ID 18K1)

description:
Library name: 18K1
EDTA plasma sample from a participant with control without angiographic coronary artery disease; CeGaT ID S10467Nr8, external ID 18K1.


title: Plasma microRNA-Seq (external ID 12K1)

description:
Library name: 12K1
EDTA plasma sample from a participant with control without angiographic coronary artery disease; CeGaT ID S10467Nr5, external ID 12K1.


title: Plasma microRNA-Seq (external ID 11K2)

description:
Library name: 11K2
EDTA plasma sample from a participant with control without angiographic coronary artery disease; CeGaT ID S10467Nr3, external ID 11K2.


title: Plasma microRNA-Seq (external ID 10.10.Plume)

description:
Library name: 10.10.Plume
EDTA plasma sample from a participant with control without angiographic coronary artery disease; CeGaT ID S10467Nr40, external ID 10.10.Plume.


title: AML001_Palb_R2

city: Houston

first: Pavel

last: Sumazin

state: TX

address: 1102 Bates St

department: Pediatric

institute: Baylor College of Medicine

description: Library name: B14

data_processing:
We used Xenome tool for analyzing bulk RNA-seq and scRNA-seq profiles of PDX samples to classify the xenograft-derived sequence read data, which effectively handles a mix of reads from both the host and the graft, and subsequently aligned and quantified the RNA-seq reads to the human reference genome GRCh37 using RSEM.
Assembly: hg19
Supplementary files format and content: tab-delimited text files include count values for each Sample.

source_name: Bone Marrow

extract_protocol:
RNA was extracted using the Qiagen RNeasy Plus mini kit with a genomic DNA elimination column (74104).
Extracted RNA samples were profiled using Illumina Novaseq 6000 with 25M reads per sample.

value: Bone Marrow

tag: pdx model

value: Palbociclib


title: AML001_Quiz_R2

description: Library name: B15

value: Quizartinib


title: AML001_Combo_R2

description: Library name: B16

value: Quizartinib & Palbociclib


title: AML001_Quiz_R1

description: Library name: A3


title: AML001_Combo_R1

description: Library name: A4


title: AML001_Palb_R1

description: Library name: A2


title: AML001_DMSO_R2

description: Library name: B13


title: AML903_Quiz_R3

description: Library name: M136

value: PDX PATDRZ (AML903)


title: AML903_Quiz_R4

description: Library name: M545


title: AML001_DMSO_R1

description: Library name: A1


title: AML903_Quiz_R1

description: Library name: M131


title: Plasma microRNA-Seq (external ID 23K1)

description:
Library name: 23K1
EDTA plasma sample from a participant with control without angiographic coronary artery disease; CeGaT ID S10467Nr12, external ID 23K1.


title: AML903_DMSO_R4

description: Library name: M127


title: AML903_DMSO_R3

description: Library name: M186


title: AML903_DMSO_R1

description: Library name: M128


title: AML903_Palb_R1

description: Library name: M546


title: Input TRiC rep1

city: Martinsried/Planegg

first: Martin

last: Mueller

address: Am Klopferspitz 18

country: Germany

institute: MPI of Biochemistry

description:
Library name: Input_TRiC_A
Counts_TRiC.txt

data_processing:
equencing reads were demultiplexed and trimmed using a custom awk script. The UMI were extracted using UMI-tools using the option ‘--extract-method=regex --bc-pattern="ˆ(?P<umi_1>.{2}).+(?P<umi_2>.{6})$"’, which serves to remove duplicated reads arising from library amplification. The clipped reads were then mapped against ncRNA/rRNA indices using Bowtie2 (v2.4.2) with the parameters ‘-N 1 -L 15’. Unaligned reads were mapped against the genome using STAR (v2.7.10a) with parameters ‘--outFilterMismatchNmax 2 --quantMode TranscriptomeSAM GeneCounts --outSAMattributes MD NH --outFilterMultimapNmax 1’.
Assembly: Homo sapiens (human) genome assembly GRCh38 (hg38)
Supplementary files format and content: Tab delimited text file with raw counts for all samples
Library strategy: Ribo-Seq

growth_protocol: Human U2OS cells were grown in complete media with DMEM containing 4.5 g/L D-glucose (Gibco), 10% fetal bovine serum (Gibco), 1% penicillin/streptomycin (Gibco) and 1% non-essential amino acids (Gibco) at 37°C and 5% CO2. Cells were either transfected with lipofectamine 3000 (Thermo Fisher) or electroporated (Neon transfection system, Invitrogen) following the manufacturer’s instructions.

extract_protocol:
Cells were treated with 100 µg/mL CHX for 1 min at 37°C before harvest. Cells were washed two times with PBS containing Ca2+/Mg2+ and incubated with 2 mM DSP((dithiobis(succinimidyl propionate))  for 30 min at RT for crosslinking. DSP solution was removed and incubated with quenching buffer (20 mM Tris-HCl pH 7.5, 300 mM glycine) for 15 min at RT. Cells were washed two times with ice cold PBS containing Ca2+/Mg2+ and lysed in lysis buffer (20 mM HEPES, 150 mM NaCl, 5 mM MgCl2, 1% IGEPAL CA-630, 20 U/mL apyrase, 1 mM PMSF, 2 mM DTT, 100 µg/mL CHX, cOmplete Protease Inhibitor, benzonase) on an end-over-end rotor for 30 min at 4°C. Lysate was digested with 500 U per 1 mg RNase I (Lucigen) at 4°C for 1 h. Ribosome pellets were isolated using a 25% sucrose cushion prepared in lysis buffer without IGEPAL CA-630 and supplemented with 20 U/mL SUPERase*In (Invitrogen). Samples were centrifuged at 55,000 rpm in a SW 55 Ti rotor (Beckman Coulter) for 1 h at 4°C.  Pellets were resuspended in lysis buffer and used for anti-Halo-tag pull down. Samples of the total RNA from the ribosome pellets were resuspended in TRIzol reagent (Invitrogen). Halo-tag pull down was performed as described above. Ribosome protected fragments (RPFs) were recovered and libraries were prepared as described before 31.
Libraries were generated as described in McGlincy et al. (2017)

value: osteosarcoma cells


title: Input PFDN rep2

description:
Library name: Input_PFDN_B
Counts_PFDN.txt


title: IP TRiC rep2

description:
Library name: IP_TRiC_B
Counts_TRiC.txt


title: IP TRiC rep1

description:
Library name: IP_TRiC_A
Counts_TRiC.txt


title: Input TRiC rep2

description:
Library name: Input_TRiC_B
Counts_TRiC.txt


title: IP PFDN rep2

description:
Library name: IP_PFDN_B
Counts_PFDN.txt


title: Input PFDN rep1

description:
Library name: Input_PFDN_A
Counts_PFDN.txt


title: CD71+cells-VOE-ID96_1

city: Atlanta

first: Varsha

last: Bhat

state: Georgia

address: 950 Atlantic Drive, EBB1

institute: Georgia Institute of Technology

description:
Library name: 533576
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt

data_processing:
Quality control of the paired-end reads was performed using FastQC (version 0.11.9).
Read alignment was performed using STAR (version 2.7.10b) with the GRCh38 primary assembly and GENCODE annotation (release 42)
The number of reads per gene was quantified using HTSeq (version 2.0.2) with the same GENCODE annotation as reference.
Genes with zero expression in at least 10% of the samples were removed, and the raw read counts were normalized for library size with the TMM method implemented in edgeR.
Assembly: GRCh38
Supplementary files format and content: tab-delimited text file includes raw counts for each sample
Supplementary files format and content: tab-delimited text file includes normalized counts for each sample

molecule: polyA RNA

source_name: CD71+ cells

extract_protocol:
A total of 3-5 mL of whole blood was collected in EDTA tubes for each patient at steady state at a scheduled outpatient clinic visit, during hospitalization for VOE, or during a follow-up visit in clinic. The blood samples were incubated with Miltenyi Whole Blood CD45 microbeads, and CD45+ cells were extracted using an AutoMACS machine. The CD45- fraction was incubated with Miltenyi CD71 microbeads, and a similar separation was performed using the AutoMACS.
RNA sequencing (RNA-seq) libraries were prepared using the Illumina TruSeq RNA Library Prep Kit and sequenced on the Illumina NovaSeq 6000 with a paired-end 101-bp reads protocol

value: CD71+ cells

tag: collection date

tag: chronic pain

value: No

tag: libprep batch

tag: subject id

tag: status

value: VOE


title: CD71+cells-VOE-ID96_2

description:
Library name: 516945
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID78_2

description:
Library name: 516943
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt

value: Yes


title: CD71+cells-VOE-ID59

description:
Library name: 381412
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID76

description:
Library name: 381414
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID78_1

description:
Library name: 516922
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID558

description:
Library name: 516950
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID540_2

description:
Library name: 516944
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID540_1

description:
Library name: 381283
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID538

description:
Library name: 381426
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID495

description:
Library name: 381435
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID474

description:
Library name: 381423
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: AML903_Quiz_R2

description: Library name: M134


title: CD71+cells-VOE-ID404_2

description:
Library name: 516991
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: AML903_DMSO_R2

description: Library name: M188

value: DMSO


title: CD71+cells-VOE-ID404_1

description:
Library name: 516942
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID344

description:
Library name: 516912
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID338_2

description:
Library name: 516876
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: IP PFDN rep1

description:
Library name: IP_PFDN_A
Counts_PFDN.txt


title: CD71+cells-VOE-ID330

description:
Library name: 381447
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID280

description:
Library name: 516927
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID242_2

description:
Library name: 516953
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID242_1

description:
Library name: 381417
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID253

description:
Library name: 381354
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID263

description:
Library name: 516987
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID240

description:
Library name: 516935
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID199

description:
Library name: 381368
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID225

description:
Library name: 381424
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID209

description:
Library name: 516990
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID568

description:
Library name: 516896
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID194_4

description:
Library name: 516978
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID194_5

description:
Library name: 516988
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID194_2

description:
Library name: 516921
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID194_3

description:
Library name: 516936
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID137_2

description:
Library name: 516931
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID169

description:
Library name: 516859
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID151

description:
Library name: 516925
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID338_1

description:
Library name: 381427
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID137_3

description:
Library name: 516960
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID171

description:
Library name: 516869
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID137_1

description:
Library name: 516898
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID137_4

description:
Library name: 516998
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID136_2

description:
Library name: 516992
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID98

description:
Library name: 516961
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt

value: Steady State


title: CD71+cells-Steady-State-ID99

description:
Library name: 516899
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID136_1

description:
Library name: 516980
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt

value: male


title: CD71+cells-Steady-State-ID93

description:
Library name: 516861
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID9_1

description:
Library name: 517108
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID9_2

description:
Library name: 517109
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID83

description:
Library name: 381413
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID82

description:
Library name: 516877
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID77

description:
Library name: 381400
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-VOE-ID194_1

description:
Library name: 516903
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID72

description:
Library name: 381339
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID76

description:
Library name: 516909
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID78

description:
Library name: 516897
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID668

description:
Library name: 516948
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID79

description:
Library name: 517072
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID71

description:
Library name: 516862
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID667

description:
Library name: 516965
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID656

description:
Library name: 516982
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID678

description:
Library name: 381425
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID689

description:
Library name: 517015
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID632

description:
Library name: 381444
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID638

description:
Library name: 381433
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID631

description:
Library name: 381450
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID628

description:
Library name: 381322
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID60

description:
Library name: 517081
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID96

description:
Library name: 517145
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID652

description:
Library name: 517004
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID630

description:
Library name: 381310
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID59

description:
Library name: 381361
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID615_2

description:
Library name: 517123
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID569

description:
Library name: 381340
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID582

description:
Library name: 381316
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID585

description:
Library name: 381315
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID584

description:
Library name: 381410
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID558

description:
Library name: 381384
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID552

description:
Library name: 381415
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID538

description:
Library name: 516871
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID542

description:
Library name: 381408
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID535

description:
Library name: 381393
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID521

description:
Library name: 516872
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID528

description:
Library name: 516906
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID53_1

description:
Library name: 517134
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID50

description:
Library name: 381348
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID518

description:
Library name: 381317
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID615_1

description:
Library name: 517122
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID506

description:
Library name: 516905
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID5

description:
Library name: 517092
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID499

description:
Library name: 517068
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID501

description:
Library name: 381421
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID495

description:
Library name: 516853
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID494

description:
Library name: 516854
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID488

description:
Library name: 516890
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID451

description:
Library name: 381436
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID443

description:
Library name: 381351
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID433

description:
Library name: 381390
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID470

description:
Library name: 381346
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID452

description:
Library name: 381394
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID424

description:
Library name: 516907
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID426

description:
Library name: 381397
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID417

description:
Library name: 381402
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID430

description:
Library name: 517012
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID53_2

description:
Library name: 517135
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID413

description:
Library name: 517127
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID403

description:
Library name: 381398
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID416

description:
Library name: 381357
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID414

description:
Library name: 381392
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID396

description:
Library name: 381376
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID395

description:
Library name: 516908
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID401

description:
Library name: 381439
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID498

description:
Library name: 381332
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID363

description:
Library name: 516881
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID445

description:
Library name: 381362
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID356

description:
Library name: 517153
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID388

description:
Library name: 516934
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID369

description:
Library name: 517150
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID354_2

description:
Library name: 381389
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID358

description:
Library name: 516894
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID351

description:
Library name: 516868
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID354_1

description:
Library name: 381344
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID425

description:
Library name: 381391
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID332

description:
Library name: 381416
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID336

description:
Library name: 517133
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID330

description:
Library name: 516882
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID333

description:
Library name: 381358
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID305_1

description:
Library name: 381349
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID305_2

description:
Library name: 517079
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID322

description:
Library name: 381403
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID338

description:
Library name: 516893
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID303

description:
Library name: 516891
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID299

description:
Library name: 517008
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID320

description:
Library name: 381385
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID297

description:
Library name: 381337
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID296

description:
Library name: 381430
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID294

description:
Library name: 516904
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID266

description:
Library name: 516860
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID361

description:
Library name: 381364
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID286

description:
Library name: 381448
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID261

description:
Library name: 516968
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID260

description:
Library name: 517013
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID257

description:
Library name: 516902
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID246

description:
Library name: 516933
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID227_1

description:
Library name: 517124
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID227_2

description:
Library name: 517125
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID225

description:
Library name: 381347
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID253

description:
Library name: 381374
geo_rawcounts_CD71.txt
geo_normalizedcounts_CD71.txt


title: CD71+cells-Steady-State-ID236_1

description:
Library name: 517154
geo_rawcounts_CD71.txt
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Library name: 517140
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geo_normalizedcounts_CD71.txt


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geo_normalizedcounts_CD71.txt


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Library name: 516900
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geo_normalizedcounts_CD71.txt


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Library name: 381366
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geo_normalizedcounts_CD71.txt


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Library name: 381406
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geo_normalizedcounts_CD71.txt


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Library name: 517128
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geo_normalizedcounts_CD71.txt


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Library name: 516885
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geo_normalizedcounts_CD71.txt


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Library name: 516884
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geo_normalizedcounts_CD71.txt


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Library name: 381449
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geo_normalizedcounts_CD71.txt


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Library name: 516855
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geo_normalizedcounts_CD71.txt


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Library name: 516879
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geo_normalizedcounts_CD71.txt


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Library name: 381341
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geo_normalizedcounts_CD71.txt


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Library name: 381335
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geo_normalizedcounts_CD71.txt


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Library name: 516923
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geo_normalizedcounts_CD71.txt


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Library name: 381420
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geo_normalizedcounts_CD71.txt


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Library name: 381360
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geo_normalizedcounts_CD71.txt


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Library name: 381383
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geo_normalizedcounts_CD71.txt


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Library name: 516917
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geo_normalizedcounts_CD71.txt


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Library name: 381405
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geo_normalizedcounts_CD71.txt


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Library name: 516856
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geo_normalizedcounts_CD71.txt


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Library name: 516895
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Library name: 517111
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geo_normalizedcounts_CD71.txt


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geo_normalizedcounts_CD71.txt


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Library name: 381428
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geo_normalizedcounts_CD71.txt


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Library name: 381343
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geo_normalizedcounts_CD71.txt


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Library name: 381422
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geo_normalizedcounts_CD71.txt


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Library name: 381336
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geo_normalizedcounts_CD71.txt


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Library name: 516852
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geo_normalizedcounts_CD71.txt


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geo_normalizedcounts_CD71.txt


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geo_normalizedcounts_CD71.txt


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geo_normalizedcounts_CD71.txt

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Library name: 516883
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geo_normalizedcounts_CD71.txt


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geo_normalizedcounts_CD71.txt


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Library name: 516930
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geo_normalizedcounts_CD71.txt


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geo_normalizedcounts_CD71.txt


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Library name: 381407
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geo_normalizedcounts_CD71.txt


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Library name: 516913
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Library name: 517425
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Library name: 517463
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Library name: 517423
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Library name: 517292
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Library name: 517290
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Library name: 517379
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Library name: 517430
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Library name: 517303
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Library name: 517312
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Library name: 517470
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Library name: 517304
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Library name: 517422
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geo_normalizedcounts_CD45.txt


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Library name: 517300
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Library name: 516995
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geo_normalizedcounts_CD71.txt


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Library name: 517395
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Library name: 517410
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geo_normalizedcounts_CD45.txt


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Library name: 517215
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geo_normalizedcounts_CD45.txt


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Library name: 517324
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Library name: 517294
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geo_normalizedcounts_CD45.txt


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Library name: 517433
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geo_normalizedcounts_CD45.txt


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Library name: 517237
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geo_normalizedcounts_CD45.txt


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Library name: 517466
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Library name: 517467
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geo_normalizedcounts_CD45.txt


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Library name: 517405
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geo_normalizedcounts_CD45.txt


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Library name: 517458
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geo_normalizedcounts_CD45.txt


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Library name: 517301
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Library name: 517386
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Library name: 517419
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geo_normalizedcounts_CD45.txt


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Library name: 517342
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Library name: 517352
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geo_normalizedcounts_CD45.txt


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Library name: 517408
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geo_normalizedcounts_CD45.txt


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Library name: 517477
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geo_normalizedcounts_CD45.txt


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Library name: 517359
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Library name: 517440
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geo_normalizedcounts_CD45.txt


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Library name: 517414
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geo_normalizedcounts_CD45.txt


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Library name: 517471
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geo_normalizedcounts_CD45.txt


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Library name: 517459
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geo_normalizedcounts_CD45.txt


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Library name: 517382
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geo_normalizedcounts_CD45.txt


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Library name: 517469
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Library name: 517186
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Library name: 517291
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Library name: 517344
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Library name: 517360
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Library name: 517380
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geo_normalizedcounts_CD45.txt


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Library name: 517392
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geo_normalizedcounts_CD45.txt


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Library name: 517278
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Library name: 517302
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geo_normalizedcounts_CD45.txt


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Library name: 517345
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geo_normalizedcounts_CD45.txt


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Library name: 517404
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geo_normalizedcounts_CD45.txt


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Library name: 517191
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geo_normalizedcounts_CD45.txt


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Library name: 517240
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geo_normalizedcounts_CD45.txt


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Library name: 517445
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Library name: 517428
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Library name: 517443
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geo_normalizedcounts_CD45.txt


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Library name: 517438
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geo_normalizedcounts_CD45.txt


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Library name: 517231
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geo_normalizedcounts_CD45.txt


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Library name: 517439
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geo_normalizedcounts_CD45.txt


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Library name: 517350
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geo_normalizedcounts_CD45.txt


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geo_normalizedcounts_CD45.txt


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Library name: 517461
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geo_normalizedcounts_CD45.txt


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Library name: 517583
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geo_normalizedcounts_CD45.txt


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Library name: 517442
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geo_normalizedcounts_CD45.txt


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Library name: 517441
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Library name: 517547
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Library name: 517257
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Library name: 517327
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Library name: 517214
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Library name: 517289
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Library name: 517355
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geo_normalizedcounts_CD45.txt


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title: CD45+cells-Steady-State-ID50

description:
Library name: 517204
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID494

description:
Library name: 517337
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID495

description:
Library name: 517336
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID488

description:
Library name: 517373
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID499

description:
Library name: 517543
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID470

description:
Library name: 517202
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID485

description:
Library name: 517357
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID544

description:
Library name: 517578
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID47

description:
Library name: 517241
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID451

description:
Library name: 517313
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID445

description:
Library name: 517227
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID438

description:
Library name: 517331
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID426

description:
Library name: 517275
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID430

description:
Library name: 517490
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID425

description:
Library name: 517267
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID416

description:
Library name: 517221
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID417

description:
Library name: 517280
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID424

description:
Library name: 517390
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID395

description:
Library name: 517391
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID414

description:
Library name: 517269
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID389

description:
Library name: 517332
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID396

description:
Library name: 517248
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID403

description:
Library name: 517276
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID369

description:
Library name: 517601
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID387

description:
Library name: 517456
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID363

description:
Library name: 517364
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID358

description:
Library name: 517377
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID366

description:
Library name: 517363
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID354_2

description:
Library name: 517265
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID362

description:
Library name: 517229
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID351

description:
Library name: 517351
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID361

description:
Library name: 517230
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID338

description:
Library name: 517376
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID340

description:
Library name: 517444
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID433

description:
Library name: 517266
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID333

description:
Library name: 517222
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt


title: CD45+cells-Steady-State-ID354_1

description:
Library name: 517199
geo_rawcounts_CD45.txt
geo_normalizedcounts_CD45.txt