title: DNase-seq from CD4-positive, alpha-beta T cell (ENCLB889BVG)

description:
https://www.encodeproject.org/experiments/ENCSR238EXW/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR238EXW
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB889BVG

source_name: Homo sapiens female adult (34 years) CD4-positive, alpha-beta T primary cell treated with 100 ng/mL Interleukin-2 for 24 hours

value: CD4-positive, alpha-beta T cell

value: 34 year

value: treatment_term_id:UniProtKB:P60568; treatment_term_name:Interleukin-2; treatment_type:protein; duration:24; duration_units:hour;

value: ENCBS047EDA at ENCODE; https://www.encodeproject.org/ENCBS047EDA/


title: Flow-FISH CRISPR screen from K562 (ENCLB417EIX)

status: Public on Feb 28 2026

type: SRA

city: Stanford

first: ENCODE

last: DCC

state: CA

address: 300 Pasteur Dr

country: USA

institute: ENCODE DCC

description:
https://www.encodeproject.org/experiments/ENCSR238DCF/
***************
biological replicate number: 2
technical replicate number: 2
description:
experiment encode accession: ENCSR238DCF
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB417EIX
size range: 200-210

library_source: genomic

data_processing: See GSM*_README.txt supplementary file linked below

molecule: genomic DNA

organism: Homo sapiens

source_name: Homo sapiens K562 cell line genetically modified (insertion) using transduction, genetically modified using CRISPRi (sgRNA)

tag: line

value: cell line

tag: biosample encode accession

tag: encode accession

tag: Sex

value: female

tag: health state

value: chronic myelogenous leukemia (CML)

tag: dev stage

value: adult

tag: age

value: 53 year

tag: lab

value: Jesse Engreitz, Stanford

tag: source

value: ATCC

tag: link

value: ENCBS172PPI at ENCODE; https://www.encodeproject.org/ENCBS172PPI/


title: Flow-FISH CRISPR screen from K562 (ENCLB429REG)

description:
https://www.encodeproject.org/experiments/ENCSR238DCF/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR238DCF
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB429REG
size range: 200-210

value: ENCBS106ZYK at ENCODE; https://www.encodeproject.org/ENCBS106ZYK/


title: Flow-FISH CRISPR screen from K562 (ENCLB046NKQ)

description:
https://www.encodeproject.org/experiments/ENCSR238DCF/
***************
biological replicate number: 1
technical replicate number: 4
description:
experiment encode accession: ENCSR238DCF
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB046NKQ
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB515SWC)

description:
https://www.encodeproject.org/experiments/ENCSR238DCF/
***************
biological replicate number: 2
technical replicate number: 3
description:
experiment encode accession: ENCSR238DCF
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB515SWC
size range: 200-210


title: DNase-seq from stimulated activated CD4-positive, alpha-beta T cell (ENCLB989XHH)

description:
https://www.encodeproject.org/experiments/ENCSR236SNH/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR236SNH
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB989XHH

source_name: Homo sapiens male adult (42 years) stimulated activated CD4-positive, alpha-beta T primary cell treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-2 for 48 hours

value: primary cell

value: male

value: 42 year

value: John Stamatoyannopoulos, UW

value: AllCells

tag: treatments

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody; duration:48; duration_units:hour; treatment_term_id:UniProtKB:P60568; treatment_term_name:Interleukin-2; treatment_type:protein; duration:48; duration_units:hour;

value: ENCBS949DNR at ENCODE; https://www.encodeproject.org/ENCBS949DNR/


title: DNase-seq from HUDEP-2 (ENCLB229UAU)

description:
https://www.encodeproject.org/experiments/ENCSR448SID/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR448SID
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB229UAU

source_name: Homo sapiens HUDEP-2 cell line

value: unknown

value: Riken BioResource Cell Bank

value: ENCBS595OMB at ENCODE; https://www.encodeproject.org/ENCBS595OMB/


title: Flow-FISH CRISPR screen from K562 (ENCLB115GCG)

description:
https://www.encodeproject.org/experiments/ENCSR235OSX/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR235OSX
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB115GCG
size range: 200-210

value: cell line

value: female

value: chronic myelogenous leukemia (CML)

value: ENCBS366MQK at ENCODE; https://www.encodeproject.org/ENCBS366MQK/


title: Flow-FISH CRISPR screen from K562 (ENCLB796QAM)

description:
https://www.encodeproject.org/experiments/ENCSR235OSX/
***************
biological replicate number: 1
technical replicate number: 4
description:
experiment encode accession: ENCSR235OSX
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB796QAM
size range: 200-210

value: adult

value: 53 year

value: Jesse Engreitz, Stanford

value: ATCC


title: Flow-FISH CRISPR screen from K562 (ENCLB698KBT)

description:
https://www.encodeproject.org/experiments/ENCSR235OSX/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR235OSX
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB698KBT
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB787LGC)

description:
https://www.encodeproject.org/experiments/ENCSR235OSX/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR235OSX
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB787LGC
size range: 200-210

value: ENCBS997VON at ENCODE; https://www.encodeproject.org/ENCBS997VON/


title: Flow-FISH CRISPR screen from K562 (ENCLB150UOH)

description:
https://www.encodeproject.org/experiments/ENCSR235EVH/
***************
biological replicate number: 2
technical replicate number: 3
description:
experiment encode accession: ENCSR235EVH
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB150UOH
size range: 200-210

value: ENCBS679JRF at ENCODE; https://www.encodeproject.org/ENCBS679JRF/


title: Flow-FISH CRISPR screen from K562 (ENCLB742OXB)

description:
https://www.encodeproject.org/experiments/ENCSR235OSX/
***************
biological replicate number: 2
technical replicate number: 2
description:
experiment encode accession: ENCSR235OSX
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB742OXB
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB938UOK)

description:
https://www.encodeproject.org/experiments/ENCSR235OSX/
***************
biological replicate number: 2
technical replicate number: 3
description:
experiment encode accession: ENCSR235OSX
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB938UOK
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB712DHK)

description:
https://www.encodeproject.org/experiments/ENCSR235EVH/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR235EVH
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB712DHK
size range: 200-210

value: ENCBS886QAD at ENCODE; https://www.encodeproject.org/ENCBS886QAD/


title: Flow-FISH CRISPR screen from K562 (ENCLB219LFZ)

description:
https://www.encodeproject.org/experiments/ENCSR235OSX/
***************
biological replicate number: 1
technical replicate number: 3
description:
experiment encode accession: ENCSR235OSX
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB219LFZ
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB504PLW)

description:
https://www.encodeproject.org/experiments/ENCSR238DCF/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR238DCF
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB504PLW
size range: 200-210

value: ENCBS106ZYK at ENCODE; https://www.encodeproject.org/ENCBS106ZYK/


title: Flow-FISH CRISPR screen from K562 (ENCLB782VAZ)

description:
https://www.encodeproject.org/experiments/ENCSR235EVH/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR235EVH
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB782VAZ
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB232IKT)

description:
https://www.encodeproject.org/experiments/ENCSR235OSX/
***************
biological replicate number: 2
technical replicate number: 4
description:
experiment encode accession: ENCSR235OSX
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB232IKT
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB007YEU)

description:
https://www.encodeproject.org/experiments/ENCSR235EVH/
***************
biological replicate number: 2
technical replicate number: 2
description:
experiment encode accession: ENCSR235EVH
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB007YEU
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB870QUB)

description:
https://www.encodeproject.org/experiments/ENCSR238DCF/
***************
biological replicate number: 1
technical replicate number: 3
description:
experiment encode accession: ENCSR238DCF
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB870QUB
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB373CKR)

description:
https://www.encodeproject.org/experiments/ENCSR235EVH/
***************
biological replicate number: 1
technical replicate number: 4
description:
experiment encode accession: ENCSR235EVH
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB373CKR
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB012EXF)

description:
https://www.encodeproject.org/experiments/ENCSR235EVH/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR235EVH
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB012EXF
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB945YIU)

description:
https://www.encodeproject.org/experiments/ENCSR235EVH/
***************
biological replicate number: 2
technical replicate number: 4
description:
experiment encode accession: ENCSR235EVH
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB945YIU
size range: 200-210


title: DNase-seq from activated CD4-positive, alpha-beta T cell (ENCLB079RTH)

description:
https://www.encodeproject.org/experiments/ENCSR233JAE/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR233JAE
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB079RTH

source_name: Homo sapiens male adult (38 years) activated CD4-positive, alpha-beta T primary cell treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL TNF-alpha for 24 hours

value: primary cell

value: male

value: 38 year

value: John Stamatoyannopoulos, UW

value: AllCells

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody; duration:24; duration_units:hour; treatment_term_id:UniProtKB:P01375; treatment_term_name:TNF-alpha; treatment_type:protein; duration:24; duration_units:hour;

value: ENCBS198APF at ENCODE; https://www.encodeproject.org/ENCBS198APF/


title: DNase-seq from hippocampal formation (ENCLB510DGT)

description:
https://www.encodeproject.org/experiments/ENCSR447LUI/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR447LUI
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-30
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB510DGT

source_name: Homo sapiens male adult (82 years) hippocampal formation tissue

value: hippocampal formation

value: tissue

value: 82 year

value: Thomas Montine

value: ENCBS334BSC at ENCODE; https://www.encodeproject.org/ENCBS334BSC/


title: Flow-FISH CRISPR screen from K562 (ENCLB656MNL)

description:
https://www.encodeproject.org/experiments/ENCSR235EVH/
***************
biological replicate number: 1
technical replicate number: 3
description:
experiment encode accession: ENCSR235EVH
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB656MNL
size range: 200-210

value: cell line

value: female

value: chronic myelogenous leukemia (CML)

value: adult

value: 53 year

value: Jesse Engreitz, Stanford

value: ATCC


title: DNase-seq from CD4-positive, alpha-beta T cell (ENCLB358SJY)

description:
https://www.encodeproject.org/experiments/ENCSR446WYO/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR446WYO
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB358SJY

source_name: Homo sapiens female adult (39 years) CD4-positive, alpha-beta T primary cell

value: CD4-positive, alpha-beta T cell

value: primary cell

value: 39 year

value: Shelly Heimfeld

value: ENCBS543RLW at ENCODE; https://www.encodeproject.org/ENCBS543RLW/


title: Flow-FISH CRISPR screen from K562 (ENCLB954NDV)

description:
https://www.encodeproject.org/experiments/ENCSR232IYM/
***************
biological replicate number: 2
technical replicate number: 2
description:
experiment encode accession: ENCSR232IYM
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB954NDV
size range: 200-210

value: ENCBS404RAK at ENCODE; https://www.encodeproject.org/ENCBS404RAK/


title: Flow-FISH CRISPR screen from K562 (ENCLB103DYU)

description:
https://www.encodeproject.org/experiments/ENCSR232IYM/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR232IYM
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB103DYU
size range: 200-210

value: ENCBS563AYT at ENCODE; https://www.encodeproject.org/ENCBS563AYT/


title: Flow-FISH CRISPR screen from K562 (ENCLB785BHM)

description:
https://www.encodeproject.org/experiments/ENCSR232IYM/
***************
biological replicate number: 1
technical replicate number: 4
description:
experiment encode accession: ENCSR232IYM
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB785BHM
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB530PED)

description:
https://www.encodeproject.org/experiments/ENCSR232IYM/
***************
biological replicate number: 1
technical replicate number: 3
description:
experiment encode accession: ENCSR232IYM
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB530PED
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB671WGZ)

description:
https://www.encodeproject.org/experiments/ENCSR232IYM/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR232IYM
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB671WGZ
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB618DYK)

description:
https://www.encodeproject.org/experiments/ENCSR232IYM/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR232IYM
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB618DYK
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB813WHA)

description:
https://www.encodeproject.org/experiments/ENCSR232IYM/
***************
biological replicate number: 2
technical replicate number: 4
description:
experiment encode accession: ENCSR232IYM
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB813WHA
size range: 200-210


title: DNase-seq from activated CD4-positive, CD25-positive, alpha-beta regulatory T cell (ENCLB184SJI)

description:
https://www.encodeproject.org/experiments/ENCSR230TXS/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR230TXS
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB184SJI

source_name: Homo sapiens male adult (38 years) activated CD4-positive, CD25-positive, alpha-beta regulatory T primary cell

value: male

value: 38 year

value: John Stamatoyannopoulos, UW

value: AllCells

value: ENCBS955IGJ at ENCODE; https://www.encodeproject.org/ENCBS955IGJ/


title: DNase-seq from activated CD4-positive, alpha-beta T cell (ENCLB503KLW)

description:
https://www.encodeproject.org/experiments/ENCSR233JAE/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR233JAE
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB503KLW

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody; duration:24; duration_units:hour; treatment_term_id:UniProtKB:P01375; treatment_term_name:TNF-alpha; treatment_type:protein; duration:24; duration_units:hour;

value: ENCBS664LJV at ENCODE; https://www.encodeproject.org/ENCBS664LJV/


title: Flow-FISH CRISPR screen from K562 (ENCLB034MSK)

description:
https://www.encodeproject.org/experiments/ENCSR232IYM/
***************
biological replicate number: 2
technical replicate number: 3
description:
experiment encode accession: ENCSR232IYM
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB034MSK
size range: 200-210

value: cell line

value: female

value: chronic myelogenous leukemia (CML)

value: adult

value: 53 year


title: DNase-seq from effector CD4-positive, alpha-beta T cell (ENCLB765GFB)

description:
https://www.encodeproject.org/experiments/ENCSR230EOI/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR230EOI
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB765GFB

source_name: Homo sapiens male adult (56 years) effector CD4-positive, alpha-beta T primary cell

value: primary cell

value: 56 year

value: ENCBS025VTL at ENCODE; https://www.encodeproject.org/ENCBS025VTL/


title: Flow-FISH CRISPR screen from Jurkat (ENCLB971IKI)

description:
https://www.encodeproject.org/experiments/ENCSR445FVK/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR445FVK
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2022-07-11
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB971IKI
size range: 200-210

source_name: Homo sapiens Jurkat cell line genetically modified (insertion) using transduction, genetically modified using CRISPRi (sgRNA) treated with 5 ug/mL anti-CD3 for 4 hours, 100 ng/mL phorbol 12-myristate 13-acetate for 4 hours

value: Jurkat

value: acute T cell leukemia

value: child

value: 14 year

value: Jesse Engreitz, Stanford

value: ATCC

value: treatment_term_name:anti-CD3; treatment_type:antibody; duration:4; duration_units:hour; treatment_term_id:CHEBI:37537; treatment_term_name:phorbol 12-myristate 13-acetate; treatment_type:chemical; duration:4; duration_units:hour;

value: ENCBS594LPG at ENCODE; https://www.encodeproject.org/ENCBS594LPG/


title: Flow-FISH CRISPR screen from Jurkat (ENCLB640XSB)

description:
https://www.encodeproject.org/experiments/ENCSR445FVK/
***************
biological replicate number: 1
technical replicate number: 4
description:
experiment encode accession: ENCSR445FVK
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2022-07-11
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB640XSB
size range: 200-210

value: male

value: ENCBS060JQP at ENCODE; https://www.encodeproject.org/ENCBS060JQP/


title: Flow-FISH CRISPR screen from Jurkat (ENCLB144ISR)

description:
https://www.encodeproject.org/experiments/ENCSR445FVK/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR445FVK
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2022-07-11
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB144ISR
size range: 200-210

value: cell line


title: Flow-FISH CRISPR screen from Jurkat (ENCLB895CUW)

description:
https://www.encodeproject.org/experiments/ENCSR445FVK/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR445FVK
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2022-07-11
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB895CUW
size range: 200-210


title: Flow-FISH CRISPR screen from Jurkat (ENCLB525FPQ)

description:
https://www.encodeproject.org/experiments/ENCSR445FVK/
***************
biological replicate number: 2
technical replicate number: 4
description:
experiment encode accession: ENCSR445FVK
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2022-07-11
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB525FPQ
size range: 200-210


title: Flow-FISH CRISPR screen from Jurkat (ENCLB535TTJ)

description:
https://www.encodeproject.org/experiments/ENCSR445FVK/
***************
biological replicate number: 2
technical replicate number: 3
description:
experiment encode accession: ENCSR445FVK
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2022-07-11
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB535TTJ
size range: 200-210


title: Flow-FISH CRISPR screen from Jurkat (ENCLB026JXF)

description:
https://www.encodeproject.org/experiments/ENCSR445FVK/
***************
biological replicate number: 2
technical replicate number: 2
description:
experiment encode accession: ENCSR445FVK
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2022-07-11
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB026JXF
size range: 200-210


title: Flow-FISH CRISPR screen from Jurkat (ENCLB780UMB)

description:
https://www.encodeproject.org/experiments/ENCSR445FVK/
***************
biological replicate number: 1
technical replicate number: 3
description:
experiment encode accession: ENCSR445FVK
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2022-07-11
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB780UMB
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB821REL)

description:
https://www.encodeproject.org/experiments/ENCSR229ZBT/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR229ZBT
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB821REL
size range: 200-210

value: female

value: chronic myelogenous leukemia (CML)

value: ENCBS019UUP at ENCODE; https://www.encodeproject.org/ENCBS019UUP/


title: DNase-seq from activated T-helper 17 cell (ENCLB351FJQ)

description:
https://www.encodeproject.org/experiments/ENCSR230BGL/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR230BGL
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB351FJQ

source_name: Homo sapiens male adult (42 years) activated T-helper 17 primary cell treated with anti-CD3 and anti-CD28 coated beads for 16 hours, 50 U/mL Interleukin-2 for 16 hours

value: activated T-helper 17 cell

value: primary cell

value: adult

value: 42 year

value: John Stamatoyannopoulos, UW

value: AllCells

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody; duration:16; duration_units:hour; treatment_term_id:UniProtKB:P60568; treatment_term_name:Interleukin-2; treatment_type:protein; duration:16; duration_units:hour;

value: ENCBS411PAO at ENCODE; https://www.encodeproject.org/ENCBS411PAO/


title: Flow-FISH CRISPR screen from K562 (ENCLB229CFG)

description:
https://www.encodeproject.org/experiments/ENCSR229ZBT/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR229ZBT
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB229CFG
size range: 200-210

value: 53 year

value: Jesse Engreitz, Stanford

value: ATCC


title: Flow-FISH CRISPR screen from K562 (ENCLB344AHI)

description:
https://www.encodeproject.org/experiments/ENCSR229ZBT/
***************
biological replicate number: 1
technical replicate number: 4
description:
experiment encode accession: ENCSR229ZBT
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB344AHI
size range: 200-210


title: DNase-seq from activated CD8-positive, alpha-beta memory T cell (ENCLB620UXK)

description:
https://www.encodeproject.org/experiments/ENCSR443MTJ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR443MTJ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB620UXK

source_name: Homo sapiens male adult (38 years) activated CD8-positive, alpha-beta memory T primary cell treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-4 for 48 hours

value: male

value: 38 year

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody; duration:48; duration_units:hour; treatment_term_id:UniProtKB:P05112; treatment_term_name:Interleukin-4; treatment_type:protein; duration:48; duration_units:hour;

value: ENCBS328SQT at ENCODE; https://www.encodeproject.org/ENCBS328SQT/


title: Flow-FISH CRISPR screen from K562 (ENCLB526MOL)

description:
https://www.encodeproject.org/experiments/ENCSR443ECL/
***************
biological replicate number: 2
technical replicate number: 3
description:
experiment encode accession: ENCSR443ECL
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB526MOL
size range: 200-210

value: cell line

value: female

value: chronic myelogenous leukemia (CML)

value: ENCBS969LVG at ENCODE; https://www.encodeproject.org/ENCBS969LVG/


title: Flow-FISH CRISPR screen from K562 (ENCLB217GJJ)

description:
https://www.encodeproject.org/experiments/ENCSR443ECL/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR443ECL
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB217GJJ
size range: 200-210

value: adult

value: ENCBS273HQJ at ENCODE; https://www.encodeproject.org/ENCBS273HQJ/


title: Flow-FISH CRISPR screen from K562 (ENCLB183NVI)

description:
https://www.encodeproject.org/experiments/ENCSR443ECL/
***************
biological replicate number: 1
technical replicate number: 4
description:
experiment encode accession: ENCSR443ECL
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB183NVI
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB885GRP)

description:
https://www.encodeproject.org/experiments/ENCSR443ECL/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR443ECL
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB885GRP
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB076YEH)

description:
https://www.encodeproject.org/experiments/ENCSR443ECL/
***************
biological replicate number: 2
technical replicate number: 2
description:
experiment encode accession: ENCSR443ECL
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB076YEH
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB490DXL)

description:
https://www.encodeproject.org/experiments/ENCSR229ZBT/
***************
biological replicate number: 1
technical replicate number: 3
description:
experiment encode accession: ENCSR229ZBT
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB490DXL
size range: 200-210

value: ENCBS019UUP at ENCODE; https://www.encodeproject.org/ENCBS019UUP/


title: DNase-seq from activated CD8-positive, alpha-beta memory T cell (ENCLB509KWA)

description:
https://www.encodeproject.org/experiments/ENCSR442NTT/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR442NTT
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB509KWA

source_name: Homo sapiens male adult (38 years) activated CD8-positive, alpha-beta memory T primary cell treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL Interleukin-15 for 1 hour

value: primary cell

value: John Stamatoyannopoulos, UW

value: AllCells

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody; duration:1; duration_units:hour; treatment_term_id:UniProtKB:P40933; treatment_term_name:Interleukin-15; treatment_type:protein; duration:1; duration_units:hour;

value: ENCBS209QKP at ENCODE; https://www.encodeproject.org/ENCBS209QKP/


title: Flow-FISH CRISPR screen from K562 (ENCLB028VBK)

description:
https://www.encodeproject.org/experiments/ENCSR441RPP/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR441RPP
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB028VBK
size range: 200-210

value: 53 year

value: Jesse Engreitz, Stanford

value: ATCC

value: ENCBS221HAT at ENCODE; https://www.encodeproject.org/ENCBS221HAT/


title: DNase-seq from activated CD8-positive, alpha-beta memory T cell (ENCLB746OQM)

description:
https://www.encodeproject.org/experiments/ENCSR442NTT/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR442NTT
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB746OQM

value: male

value: 38 year

value: ENCBS344FRK at ENCODE; https://www.encodeproject.org/ENCBS344FRK/


title: Flow-FISH CRISPR screen from K562 (ENCLB156BLJ)

description:
https://www.encodeproject.org/experiments/ENCSR441RPP/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR441RPP
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB156BLJ
size range: 200-210

value: cell line

value: female

value: chronic myelogenous leukemia (CML)


title: DNase-seq from COR-L47 (ENCLB020PBJ)

description:
https://www.encodeproject.org/experiments/ENCSR439QPR/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR439QPR
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-30
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB020PBJ
instrument models: Illumina HiSeq 4000,Illumina NextSeq 500

source_name: Homo sapiens COR-L47 cell line

value: adult

value: 67 year

value: Sigma

value: ENCBS854FQY at ENCODE; https://www.encodeproject.org/ENCBS854FQY/


title: DNase-seq from activated CD4-positive, alpha-beta T cell (ENCLB306CSS)

description:
https://www.encodeproject.org/experiments/ENCSR229MWU/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR229MWU
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB306CSS

source_name: Homo sapiens male adult (42 years) activated CD4-positive, alpha-beta T primary cell treated with anti-CD3 and anti-CD28 coated beads for 48 hours

value: primary cell

value: 42 year

value: John Stamatoyannopoulos, UW

value: AllCells

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody; duration:48; duration_units:hour;

value: ENCBS833QOD at ENCODE; https://www.encodeproject.org/ENCBS833QOD/


title: DNase-seq from CD4-positive, alpha-beta T cell (ENCLB080XEF)

description:
https://www.encodeproject.org/experiments/ENCSR441AZV/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR441AZV
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB080XEF

source_name: Homo sapiens female adult (34 years) CD4-positive, alpha-beta T primary cell

value: CD4-positive, alpha-beta T cell

value: 34 year

value: ENCBS520IHQ at ENCODE; https://www.encodeproject.org/ENCBS520IHQ/


title: Flow-FISH CRISPR screen from K562 (ENCLB470CAD)

description:
https://www.encodeproject.org/experiments/ENCSR441RPP/
***************
biological replicate number: 1
technical replicate number: 3
description:
experiment encode accession: ENCSR441RPP
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB470CAD
size range: 200-210

value: 53 year

value: Jesse Engreitz, Stanford

value: ATCC

value: ENCBS221HAT at ENCODE; https://www.encodeproject.org/ENCBS221HAT/


title: DNase-seq from CD4-positive, alpha-beta T cell (ENCLB484FJZ)

description:
https://www.encodeproject.org/experiments/ENCSR228MIG/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR228MIG
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB484FJZ

source_name: Homo sapiens female adult (33 years) CD4-positive, alpha-beta T primary cell

value: female

value: adult

value: 33 year

value: ENCBS897GBQ at ENCODE; https://www.encodeproject.org/ENCBS897GBQ/


title: Flow-FISH CRISPR screen from K562 (ENCLB226TQP)

description:
https://www.encodeproject.org/experiments/ENCSR439ORQ/
***************
biological replicate number: 2
technical replicate number: 3
description:
experiment encode accession: ENCSR439ORQ
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB226TQP
size range: 200-210

value: cell line

value: chronic myelogenous leukemia (CML)

value: ENCBS280VEP at ENCODE; https://www.encodeproject.org/ENCBS280VEP/


title: Flow-FISH CRISPR screen from K562 (ENCLB831RAD)

description:
https://www.encodeproject.org/experiments/ENCSR441RPP/
***************
biological replicate number: 1
technical replicate number: 4
description:
experiment encode accession: ENCSR441RPP
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB831RAD
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB014UPL)

description:
https://www.encodeproject.org/experiments/ENCSR439ORQ/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR439ORQ
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB014UPL
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB347WOM)

description:
https://www.encodeproject.org/experiments/ENCSR439ORQ/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR439ORQ
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB347WOM
size range: 200-210

value: ENCBS568KHH at ENCODE; https://www.encodeproject.org/ENCBS568KHH/


title: Flow-FISH CRISPR screen from K562 (ENCLB636MGO)

description:
https://www.encodeproject.org/experiments/ENCSR439ORQ/
***************
biological replicate number: 1
technical replicate number: 4
description:
experiment encode accession: ENCSR439ORQ
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB636MGO
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB362GCS)

description:
https://www.encodeproject.org/experiments/ENCSR439ORQ/
***************
biological replicate number: 1
technical replicate number: 3
description:
experiment encode accession: ENCSR439ORQ
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB362GCS
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB644FCD)

description:
https://www.encodeproject.org/experiments/ENCSR443ECL/
***************
biological replicate number: 2
technical replicate number: 4
description:
experiment encode accession: ENCSR443ECL
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB644FCD
size range: 200-210

value: ENCBS969LVG at ENCODE; https://www.encodeproject.org/ENCBS969LVG/


title: Flow-FISH CRISPR screen from K562 (ENCLB948KYP)

description:
https://www.encodeproject.org/experiments/ENCSR443ECL/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR443ECL
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB948KYP
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB507NTL)

description:
https://www.encodeproject.org/experiments/ENCSR439ORQ/
***************
biological replicate number: 2
technical replicate number: 2
description:
experiment encode accession: ENCSR439ORQ
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB507NTL
size range: 200-210


title: DNase-seq from activated CD8-positive, alpha-beta memory T cell (ENCLB479ACQ)

description:
https://www.encodeproject.org/experiments/ENCSR437GGZ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR437GGZ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB479ACQ

source_name: Homo sapiens male adult (38 years) activated CD8-positive, alpha-beta memory T primary cell treated with anti-CD3 and anti-CD28 coated beads for 1 hour

value: primary cell

value: male

value: 38 year

value: John Stamatoyannopoulos, UW

value: AllCells

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody; duration:1; duration_units:hour;

value: ENCBS428WLV at ENCODE; https://www.encodeproject.org/ENCBS428WLV/


title: Flow-FISH CRISPR screen from K562 (ENCLB814AFK)

description:
https://www.encodeproject.org/experiments/ENCSR435XPQ/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR435XPQ
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB814AFK
size range: 200-210

source_name: Homo sapiens K562 cell line genetically modified (insertion) using transduction, genetically modified using CRISPRi (sgRNA)

value: 53 year

value: Jesse Engreitz, Stanford

value: ATCC

value: ENCBS845QNE at ENCODE; https://www.encodeproject.org/ENCBS845QNE/


title: Flow-FISH CRISPR screen from K562 (ENCLB620QSP)

description:
https://www.encodeproject.org/experiments/ENCSR435XPQ/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR435XPQ
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB620QSP
size range: 200-210

value: female

value: adult

value: ENCBS177HOX at ENCODE; https://www.encodeproject.org/ENCBS177HOX/


title: Flow-FISH CRISPR screen from K562 (ENCLB107YSQ)

description:
https://www.encodeproject.org/experiments/ENCSR435XPQ/
***************
biological replicate number: 1
technical replicate number: 4
description:
experiment encode accession: ENCSR435XPQ
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB107YSQ
size range: 200-210

value: cell line

value: chronic myelogenous leukemia (CML)


title: DNase-seq from activated CD4-positive, alpha-beta T cell (ENCLB638FBE)

description:
https://www.encodeproject.org/experiments/ENCSR437XJH/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR437XJH
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB638FBE

source_name: Homo sapiens female adult (33 years) activated CD4-positive, alpha-beta T primary cell treated with anti-CD3 and anti-CD28 coated beads for 1 hour

value: 33 year

value: ENCBS642CWO at ENCODE; https://www.encodeproject.org/ENCBS642CWO/


title: Flow-FISH CRISPR screen from K562 (ENCLB770QEV)

description:
https://www.encodeproject.org/experiments/ENCSR439ORQ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR439ORQ
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB770QEV
size range: 200-210

value: ENCBS568KHH at ENCODE; https://www.encodeproject.org/ENCBS568KHH/


title: Flow-FISH CRISPR screen from K562 (ENCLB696BDP)

description:
https://www.encodeproject.org/experiments/ENCSR443ECL/
***************
biological replicate number: 1
technical replicate number: 3
description:
experiment encode accession: ENCSR443ECL
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB696BDP
size range: 200-210

value: ENCBS273HQJ at ENCODE; https://www.encodeproject.org/ENCBS273HQJ/


title: Flow-FISH CRISPR screen from K562 (ENCLB871RRD)

description:
https://www.encodeproject.org/experiments/ENCSR435XPQ/
***************
biological replicate number: 2
technical replicate number: 3
description:
experiment encode accession: ENCSR435XPQ
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB871RRD
size range: 200-210


title: DNase-seq from K562 (ENCLB218QOQ)

description:
https://www.encodeproject.org/experiments/ENCSR227NUB/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR227NUB
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB218QOQ

source_name: Homo sapiens K562 cell line

value: John Stamatoyannopoulos, UW

value: ENCBS433MKW at ENCODE; https://www.encodeproject.org/ENCBS433MKW/


title: Flow-FISH CRISPR screen from K562 (ENCLB234CIJ)

description:
https://www.encodeproject.org/experiments/ENCSR226XFX/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR226XFX
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB234CIJ
size range: 200-210

value: ENCBS087TTM at ENCODE; https://www.encodeproject.org/ENCBS087TTM/


title: DNase-seq from activated CD4-positive, alpha-beta T cell (ENCLB131GRO)

description:
https://www.encodeproject.org/experiments/ENCSR437XJH/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR437XJH
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB131GRO

value: primary cell

value: AllCells

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody; duration:1; duration_units:hour;

value: ENCBS035OYL at ENCODE; https://www.encodeproject.org/ENCBS035OYL/


title: Flow-FISH CRISPR screen from K562 (ENCLB830UGG)

description:
https://www.encodeproject.org/experiments/ENCSR435XPQ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR435XPQ
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB830UGG
size range: 200-210

value: 53 year

value: Jesse Engreitz, Stanford

value: ATCC

value: ENCBS845QNE at ENCODE; https://www.encodeproject.org/ENCBS845QNE/


title: DNase-seq from T-cell (ENCLB857UNS)

description:
https://www.encodeproject.org/experiments/ENCSR227AUC/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR227AUC
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB857UNS

source_name: Homo sapiens female adult (33 years) T-cell primary cell

value: T-cell

value: female

value: adult

value: ENCBS653CMS at ENCODE; https://www.encodeproject.org/ENCBS653CMS/


title: Flow-FISH CRISPR screen from K562 (ENCLB545ULM)

description:
https://www.encodeproject.org/experiments/ENCSR226XFX/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR226XFX
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB545ULM
size range: 200-210

value: cell line

value: chronic myelogenous leukemia (CML)


title: Flow-FISH CRISPR screen from K562 (ENCLB721UPU)

description:
https://www.encodeproject.org/experiments/ENCSR435XPQ/
***************
biological replicate number: 2
technical replicate number: 4
description:
experiment encode accession: ENCSR435XPQ
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB721UPU
size range: 200-210

value: ENCBS177HOX at ENCODE; https://www.encodeproject.org/ENCBS177HOX/


title: Flow-FISH CRISPR screen from K562 (ENCLB784YUK)

description:
https://www.encodeproject.org/experiments/ENCSR226XFX/
***************
biological replicate number: 1
technical replicate number: 3
description:
experiment encode accession: ENCSR226XFX
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB784YUK
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB620FQD)

description:
https://www.encodeproject.org/experiments/ENCSR435XPQ/
***************
biological replicate number: 2
technical replicate number: 2
description:
experiment encode accession: ENCSR435XPQ
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB620FQD
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB221RYF)

description:
https://www.encodeproject.org/experiments/ENCSR439ORQ/
***************
biological replicate number: 2
technical replicate number: 4
description:
experiment encode accession: ENCSR439ORQ
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB221RYF
size range: 200-210

value: ENCBS280VEP at ENCODE; https://www.encodeproject.org/ENCBS280VEP/


title: Flow-FISH CRISPR screen from K562 (ENCLB303UXO)

description:
https://www.encodeproject.org/experiments/ENCSR226XFX/
***************
biological replicate number: 2
technical replicate number: 4
description:
experiment encode accession: ENCSR226XFX
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB303UXO
size range: 200-210

value: ENCBS631ZIW at ENCODE; https://www.encodeproject.org/ENCBS631ZIW/


title: Flow-FISH CRISPR screen from K562 (ENCLB333MPC)

description:
https://www.encodeproject.org/experiments/ENCSR226XFX/
***************
biological replicate number: 2
technical replicate number: 2
description:
experiment encode accession: ENCSR226XFX
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB333MPC
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB300FIH)

description:
https://www.encodeproject.org/experiments/ENCSR226XFX/
***************
biological replicate number: 2
technical replicate number: 3
description:
experiment encode accession: ENCSR226XFX
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB300FIH
size range: 200-210


title: DNase-seq from stimulated activated CD4-positive, alpha-beta T cell (ENCLB553CBS)

description:
https://www.encodeproject.org/experiments/ENCSR228KFJ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR228KFJ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB553CBS

source_name: Homo sapiens female adult (33 years) stimulated activated CD4-positive, alpha-beta T primary cell treated with anti-CD3 and anti-CD28 coated beads for 4 hours, 100 ng/mL Interleukin-15 for 4 hours

value: primary cell

value: 33 year

value: John Stamatoyannopoulos, UW

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody; duration:4; duration_units:hour; treatment_term_id:UniProtKB:P40933; treatment_term_name:Interleukin-15; treatment_type:protein; duration:4; duration_units:hour;

value: ENCBS593NNN at ENCODE; https://www.encodeproject.org/ENCBS593NNN/


title: Flow-FISH CRISPR screen from K562 (ENCLB192LVA)

description:
https://www.encodeproject.org/experiments/ENCSR226XFX/
***************
biological replicate number: 1
technical replicate number: 4
description:
experiment encode accession: ENCSR226XFX
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB192LVA
size range: 200-210

value: 53 year

value: Jesse Engreitz, Stanford

value: ENCBS087TTM at ENCODE; https://www.encodeproject.org/ENCBS087TTM/


title: Flow-FISH CRISPR screen from K562 (ENCLB329NVI)

description:
https://www.encodeproject.org/experiments/ENCSR226XFX/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR226XFX
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB329NVI
size range: 200-210

value: ATCC


title: DNase-seq from activated CD4-positive, alpha-beta T cell (ENCLB629YZJ)

description:
https://www.encodeproject.org/experiments/ENCSR226WID/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR226WID
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB629YZJ

source_name: Homo sapiens male adult (38 years) activated CD4-positive, alpha-beta T primary cell treated with anti-CD3 and anti-CD28 coated beads for 4 hours

value: male

value: 38 year

value: AllCells

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody; duration:4; duration_units:hour;

value: ENCBS090CGY at ENCODE; https://www.encodeproject.org/ENCBS090CGY/


title: DNase-seq from activated CD4-positive, alpha-beta T cell (ENCLB387ZBI)

description:
https://www.encodeproject.org/experiments/ENCSR226WID/
***************
biological replicate number: 3
technical replicate number: 1
description:
experiment encode accession: ENCSR226WID
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB387ZBI

value: adult

value: ENCBS806ASI at ENCODE; https://www.encodeproject.org/ENCBS806ASI/


title: Flow-FISH CRISPR screen from K562 (ENCLB950OFM)

description:
https://www.encodeproject.org/experiments/ENCSR435XPQ/
***************
biological replicate number: 1
technical replicate number: 3
description:
experiment encode accession: ENCSR435XPQ
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB950OFM
size range: 200-210

value: cell line

value: female

value: chronic myelogenous leukemia (CML)

value: ENCBS845QNE at ENCODE; https://www.encodeproject.org/ENCBS845QNE/


title: DNase-seq from activated CD4-positive, alpha-beta T cell (ENCLB357NGW)

description:
https://www.encodeproject.org/experiments/ENCSR226WID/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR226WID
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB357NGW

value: primary cell

value: John Stamatoyannopoulos, UW

value: ENCBS560QAP at ENCODE; https://www.encodeproject.org/ENCBS560QAP/


title: Flow-FISH CRISPR screen from K562 (ENCLB971FUT)

description:
https://www.encodeproject.org/experiments/ENCSR434HRF/
***************
biological replicate number: 1
technical replicate number: 3
description:
experiment encode accession: ENCSR434HRF
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB971FUT
size range: 200-210

value: 53 year

value: Jesse Engreitz, Stanford

value: ENCBS777FIM at ENCODE; https://www.encodeproject.org/ENCBS777FIM/


title: DNase-seq from CD4-positive, alpha-beta T cell (ENCLB068XWP)

description:
https://www.encodeproject.org/experiments/ENCSR434MLE/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR434MLE
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB068XWP

source_name: Homo sapiens female adult (37 years) CD4-positive, alpha-beta T primary cell

value: CD4-positive, alpha-beta T cell

value: 37 year

value: Shelly Heimfeld

value: ENCBS837YXZ at ENCODE; https://www.encodeproject.org/ENCBS837YXZ/


title: Flow-FISH CRISPR screen from K562 (ENCLB928RWZ)

description:
https://www.encodeproject.org/experiments/ENCSR434HRF/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR434HRF
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB928RWZ
size range: 200-210

value: ATCC


title: Flow-FISH CRISPR screen from K562 (ENCLB227EBZ)

description:
https://www.encodeproject.org/experiments/ENCSR434HRF/
***************
biological replicate number: 2
technical replicate number: 2
description:
experiment encode accession: ENCSR434HRF
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB227EBZ
size range: 200-210

value: adult

value: ENCBS915XRV at ENCODE; https://www.encodeproject.org/ENCBS915XRV/


title: Flow-FISH CRISPR screen from K562 (ENCLB193BKU)

description:
https://www.encodeproject.org/experiments/ENCSR434HRF/
***************
biological replicate number: 1
technical replicate number: 4
description:
experiment encode accession: ENCSR434HRF
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB193BKU
size range: 200-210

value: cell line


title: Flow-FISH CRISPR screen from K562 (ENCLB576ALV)

description:
https://www.encodeproject.org/experiments/ENCSR434HRF/
***************
biological replicate number: 2
technical replicate number: 3
description:
experiment encode accession: ENCSR434HRF
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB576ALV
size range: 200-210

value: female


title: Flow-FISH CRISPR screen from K562 (ENCLB719UPG)

description:
https://www.encodeproject.org/experiments/ENCSR434HRF/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR434HRF
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB719UPG
size range: 200-210

value: chronic myelogenous leukemia (CML)


title: Flow-FISH CRISPR screen from K562 (ENCLB963QTW)

description:
https://www.encodeproject.org/experiments/ENCSR434HRF/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR434HRF
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB963QTW
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB221JWV)

description:
https://www.encodeproject.org/experiments/ENCSR226BBM/
***************
biological replicate number: 2
technical replicate number: 2
description:
experiment encode accession: ENCSR226BBM
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB221JWV
size range: 200-210

value: ENCBS802VPF at ENCODE; https://www.encodeproject.org/ENCBS802VPF/


title: Flow-FISH CRISPR screen from K562 (ENCLB630HRF)

description:
https://www.encodeproject.org/experiments/ENCSR226BBM/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR226BBM
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB630HRF
size range: 200-210

value: ENCBS219EDN at ENCODE; https://www.encodeproject.org/ENCBS219EDN/


title: Flow-FISH CRISPR screen from K562 (ENCLB636CHJ)

description:
https://www.encodeproject.org/experiments/ENCSR226BBM/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR226BBM
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB636CHJ
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB562GUF)

description:
https://www.encodeproject.org/experiments/ENCSR226BBM/
***************
biological replicate number: 2
technical replicate number: 4
description:
experiment encode accession: ENCSR226BBM
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB562GUF
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB084SGL)

description:
https://www.encodeproject.org/experiments/ENCSR434HRF/
***************
biological replicate number: 2
technical replicate number: 4
description:
experiment encode accession: ENCSR434HRF
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB084SGL
size range: 200-210


title: proliferation CRISPR screen from K562 (ENCLB556FJP)

description:
https://www.encodeproject.org/experiments/ENCSR434TFF/
***************
biological replicate number: 1
technical replicate number: 1
description: Tiling, dCas9-VPR/CRISPRa proliferation screen at the GATA1, MYB, and ZMYND8 loci
experiment encode accession: ENCSR434TFF
assay title: proliferation CRISPR screen
assembly: GRCh38
encode release date: 2021-12-14
lab: Will Greenleaf, Stanford
library encode accession: ENCLB556FJP

source_name: Homo sapiens K562 cell line genetically modified (insertion) using transduction, genetically modified using CRISPRa (sgRNA) treated with 1 ug/mL Puromycin for 96 hours, 7 days post-nucleic acid delivery time

extract_protocol:
general protocol: https://www.encodeproject.org/documents/efd73756-33ac-41e4-839d-949c78bbc8f6/@@download/attachment/greenleaf_gata1_myb_zmynd8_crispr_screen_protocol.pdf
extraction method: QIAGEN DNeasy Blood & Tissue Kit

value: Will Greenleaf, Stanford

value: Michael Bassik, Stanford

value: treatment_term_id:CHEBI:17939; treatment_term_name:Puromycin; treatment_type:chemical; duration:96; duration_units:hour;

value: ENCBS789MBO at ENCODE; https://www.encodeproject.org/ENCBS789MBO/


title: Flow-FISH CRISPR screen from K562 (ENCLB172GCE)

description:
https://www.encodeproject.org/experiments/ENCSR226BBM/
***************
biological replicate number: 1
technical replicate number: 4
description:
experiment encode accession: ENCSR226BBM
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB172GCE
size range: 200-210

value: 53 year

value: Jesse Engreitz, Stanford


title: Flow-FISH CRISPR screen from K562 (ENCLB470YCW)

description:
https://www.encodeproject.org/experiments/ENCSR226BBM/
***************
biological replicate number: 1
technical replicate number: 3
description:
experiment encode accession: ENCSR226BBM
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB470YCW
size range: 200-210


title: proliferation CRISPR screen from K562 (ENCLB362HRD)

description:
https://www.encodeproject.org/experiments/ENCSR223KWN/
***************
biological replicate number: 1
technical replicate number: 1
description: Functional characterization experiment for tiling, dCas9-KRAB/CRISPRi proliferation screens at CTCF motifs in loop anchors
experiment encode accession: ENCSR223KWN
assay title: proliferation CRISPR screen
assembly: GRCh38
encode release date: 2021-12-14
lab: Will Greenleaf, Stanford
library encode accession: ENCLB362HRD

source_name: Homo sapiens K562 cell line genetically modified (insertion) using transduction, genetically modified using CRISPRi (sgRNA) treated with 1 ug/mL Puromycin for 96 hours, 21 days post-nucleic acid delivery time

extract_protocol:
general protocol: https://www.encodeproject.org/documents/3e3b5605-6931-4af2-aa69-e669d91349b6/@@download/attachment/greenleaf_ctcf_crispr_screen_protocol.pdf
extraction method: QIAGEN DNeasy Blood & Tissue Kit

value: ENCBS518GTO at ENCODE; https://www.encodeproject.org/ENCBS518GTO/


title: proliferation CRISPR screen from K562 (ENCLB025IWG)

description:
https://www.encodeproject.org/experiments/ENCSR432QJF/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR432QJF
assay title: proliferation CRISPR screen
possible controls: ENCSR469EDZ
encode release date: 2022-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB025IWG
size range: 710-720

library_source: transcriptomic

molecule: total RNA

source_name: Homo sapiens K562 cell line genetically modified (insertion) using transduction, genetically modified using CRISPRi (pgRNA), 0 days post-nucleic acid delivery time

value: male

value: colorectal carcinoma

value: 48 year

value: Bing Ren, UCSD

value: ENCBS806ROJ at ENCODE; https://www.encodeproject.org/ENCBS806ROJ/


title: proliferation CRISPR screen from K562 (ENCLB143YLK)

description:
https://www.encodeproject.org/experiments/ENCSR223KWN/
***************
biological replicate number: 2
technical replicate number: 1
description: Functional characterization experiment for tiling, dCas9-KRAB/CRISPRi proliferation screens at CTCF motifs in loop anchors
experiment encode accession: ENCSR223KWN
assay title: proliferation CRISPR screen
assembly: GRCh38
encode release date: 2021-12-14
lab: Will Greenleaf, Stanford
library encode accession: ENCLB143YLK

value: cell line

value: adult

value: ENCBS823FON at ENCODE; https://www.encodeproject.org/ENCBS823FON/


title: proliferation CRISPR screen from K562 (ENCLB626DED)

description:
https://www.encodeproject.org/experiments/ENCSR432QJF/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR432QJF
assay title: proliferation CRISPR screen
possible controls: ENCSR469EDZ
encode release date: 2022-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB626DED
size range: 710-720

value: ATCC

value: ENCBS596CTH at ENCODE; https://www.encodeproject.org/ENCBS596CTH/


title: Flow-FISH CRISPR screen from K562 (ENCLB991IIO)

description:
https://www.encodeproject.org/experiments/ENCSR432OGR/
***************
biological replicate number: 2
technical replicate number: 4
description:
experiment encode accession: ENCSR432OGR
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB991IIO
size range: 200-210

value: female

value: chronic myelogenous leukemia (CML)

value: ENCBS626EER at ENCODE; https://www.encodeproject.org/ENCBS626EER/


title: DNase-seq from K562 (ENCLB719SLD)

description:
https://www.encodeproject.org/experiments/ENCSR224ZWD/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR224ZWD
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB719SLD

value: John Stamatoyannopoulos, UW

value: ENCBS980YSR at ENCODE; https://www.encodeproject.org/ENCBS980YSR/


title: Flow-FISH CRISPR screen from K562 (ENCLB366JAK)

description:
https://www.encodeproject.org/experiments/ENCSR226BBM/
***************
biological replicate number: 2
technical replicate number: 3
description:
experiment encode accession: ENCSR226BBM
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB366JAK
size range: 200-210

value: 53 year

value: Jesse Engreitz, Stanford

value: ENCBS802VPF at ENCODE; https://www.encodeproject.org/ENCBS802VPF/


title: Flow-FISH CRISPR screen from K562 (ENCLB910VKD)

description:
https://www.encodeproject.org/experiments/ENCSR432OGR/
***************
biological replicate number: 1
technical replicate number: 4
description:
experiment encode accession: ENCSR432OGR
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB910VKD
size range: 200-210

value: ENCBS703KNA at ENCODE; https://www.encodeproject.org/ENCBS703KNA/


title: Flow-FISH CRISPR screen from K562 (ENCLB221ZUL)

description:
https://www.encodeproject.org/experiments/ENCSR432OGR/
***************
biological replicate number: 2
technical replicate number: 3
description:
experiment encode accession: ENCSR432OGR
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB221ZUL
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB796NGR)

description:
https://www.encodeproject.org/experiments/ENCSR432OGR/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR432OGR
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB796NGR
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB870DAR)

description:
https://www.encodeproject.org/experiments/ENCSR432OGR/
***************
biological replicate number: 1
technical replicate number: 3
description:
experiment encode accession: ENCSR432OGR
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB870DAR
size range: 200-210


title: DNase-seq from CD4-positive, alpha-beta T cell (ENCLB988APZ)

description:
https://www.encodeproject.org/experiments/ENCSR432IUH/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR432IUH
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB988APZ

value: CD4-positive, alpha-beta T cell

value: primary cell

value: 34 year

value: AllCells

value: ENCBS649FZV at ENCODE; https://www.encodeproject.org/ENCBS649FZV/


title: Flow-FISH CRISPR screen from K562 (ENCLB400GTC)

description:
https://www.encodeproject.org/experiments/ENCSR432OGR/
***************
biological replicate number: 2
technical replicate number: 2
description:
experiment encode accession: ENCSR432OGR
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB400GTC
size range: 200-210

value: cell line

value: adult


title: Flow-FISH CRISPR screen from K562 (ENCLB148COP)

description:
https://www.encodeproject.org/experiments/ENCSR432OGR/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR432OGR
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB148COP
size range: 200-210

value: ATCC


title: Flow-FISH CRISPR screen from K562 (ENCLB527HVQ)

description:
https://www.encodeproject.org/experiments/ENCSR226BBM/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR226BBM
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB527HVQ
size range: 200-210

value: female

value: ENCBS219EDN at ENCODE; https://www.encodeproject.org/ENCBS219EDN/


title: DNase-seq from activated CD8-positive, alpha-beta memory T cell (ENCLB928ZJU)

description:
https://www.encodeproject.org/experiments/ENCSR431YXV/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR431YXV
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB928ZJU

source_name: Homo sapiens female adult (33 years) activated CD8-positive, alpha-beta memory T primary cell treated with anti-CD3 and anti-CD28 coated beads for 48 hours, 100 ng/mL Interleukin-2 for 48 hours

value: 33 year

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody; duration:48; duration_units:hour; treatment_term_id:UniProtKB:P60568; treatment_term_name:Interleukin-2; treatment_type:protein; duration:48; duration_units:hour;

value: ENCBS891ZFQ at ENCODE; https://www.encodeproject.org/ENCBS891ZFQ/


title: Flow-FISH CRISPR screen from K562 (ENCLB847QXT)

description:
https://www.encodeproject.org/experiments/ENCSR220YCE/
***************
biological replicate number: 2
technical replicate number: 3
description:
experiment encode accession: ENCSR220YCE
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB847QXT
size range: 200-210

value: chronic myelogenous leukemia (CML)

value: 53 year

value: ENCBS236FIC at ENCODE; https://www.encodeproject.org/ENCBS236FIC/


title: Flow-FISH CRISPR screen from K562 (ENCLB959MQE)

description:
https://www.encodeproject.org/experiments/ENCSR220YCE/
***************
biological replicate number: 2
technical replicate number: 2
description:
experiment encode accession: ENCSR220YCE
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB959MQE
size range: 200-210

value: Jesse Engreitz, Stanford


title: Flow-FISH CRISPR screen from K562 (ENCLB593EAS)

description:
https://www.encodeproject.org/experiments/ENCSR220YCE/
***************
biological replicate number: 2
technical replicate number: 4
description:
experiment encode accession: ENCSR220YCE
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB593EAS
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB295BFG)

description:
https://www.encodeproject.org/experiments/ENCSR220YCE/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR220YCE
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB295BFG
size range: 200-210

value: ENCBS912IWO at ENCODE; https://www.encodeproject.org/ENCBS912IWO/


title: DNase-seq from activated CD8-positive, alpha-beta memory T cell (ENCLB907WZM)

description:
https://www.encodeproject.org/experiments/ENCSR431YXV/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR431YXV
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB907WZM

value: primary cell

value: John Stamatoyannopoulos, UW

value: ENCBS307KXK at ENCODE; https://www.encodeproject.org/ENCBS307KXK/


title: Flow-FISH CRISPR screen from K562 (ENCLB023GXR)

description:
https://www.encodeproject.org/experiments/ENCSR220YCE/
***************
biological replicate number: 1
technical replicate number: 3
description:
experiment encode accession: ENCSR220YCE
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB023GXR
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB837OUK)

description:
https://www.encodeproject.org/experiments/ENCSR220YCE/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR220YCE
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB837OUK
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB801BFI)

description:
https://www.encodeproject.org/experiments/ENCSR431BSG/
***************
biological replicate number: 1
technical replicate number: 4
description:
experiment encode accession: ENCSR431BSG
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB801BFI
size range: 200-210

value: ENCBS335MXN at ENCODE; https://www.encodeproject.org/ENCBS335MXN/


title: Flow-FISH CRISPR screen from K562 (ENCLB454QWK)

description:
https://www.encodeproject.org/experiments/ENCSR220YCE/
***************
biological replicate number: 1
technical replicate number: 4
description:
experiment encode accession: ENCSR220YCE
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB454QWK
size range: 200-210

value: cell line


title: Flow-FISH CRISPR screen from K562 (ENCLB288RJK)

description:
https://www.encodeproject.org/experiments/ENCSR431BSG/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR431BSG
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB288RJK
size range: 200-210

value: adult

value: ENCBS901TDO at ENCODE; https://www.encodeproject.org/ENCBS901TDO/


title: Flow-FISH CRISPR screen from K562 (ENCLB350ZQF)

description:
https://www.encodeproject.org/experiments/ENCSR431BSG/
***************
biological replicate number: 2
technical replicate number: 4
description:
experiment encode accession: ENCSR431BSG
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB350ZQF
size range: 200-210

value: female

value: ATCC


title: Flow-FISH CRISPR screen from K562 (ENCLB772ASC)

description:
https://www.encodeproject.org/experiments/ENCSR432OGR/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR432OGR
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB772ASC
size range: 200-210

value: ENCBS703KNA at ENCODE; https://www.encodeproject.org/ENCBS703KNA/


title: Flow-FISH CRISPR screen from K562 (ENCLB382MRK)

description:
https://www.encodeproject.org/experiments/ENCSR431BSG/
***************
biological replicate number: 1
technical replicate number: 3
description:
experiment encode accession: ENCSR431BSG
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB382MRK
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB921RMA)

description:
https://www.encodeproject.org/experiments/ENCSR431BSG/
***************
biological replicate number: 2
technical replicate number: 2
description:
experiment encode accession: ENCSR431BSG
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB921RMA
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB189BRH)

description:
https://www.encodeproject.org/experiments/ENCSR431BSG/
***************
biological replicate number: 2
technical replicate number: 3
description:
experiment encode accession: ENCSR431BSG
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB189BRH
size range: 200-210


title: DNase-seq from activated CD8-positive, alpha-beta memory T cell (ENCLB349ERE)

description:
https://www.encodeproject.org/experiments/ENCSR431AMA/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR431AMA
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB349ERE

source_name: Homo sapiens female adult (33 years) activated CD8-positive, alpha-beta memory T primary cell treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-7 for 24 hours

value: 33 year

value: AllCells

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody; duration:24; duration_units:hour; treatment_term_id:UniProtKB:P13232; treatment_term_name:Interleukin-7; treatment_type:protein; duration:24; duration_units:hour;

value: ENCBS343UWY at ENCODE; https://www.encodeproject.org/ENCBS343UWY/


title: DNase-seq from activated CD8-positive, alpha-beta memory T cell (ENCLB518QJL)

description:
https://www.encodeproject.org/experiments/ENCSR431AMA/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR431AMA
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB518QJL

value: ENCBS157IEL at ENCODE; https://www.encodeproject.org/ENCBS157IEL/


title: DNase-seq from K562 (ENCLB567JPY)

description:
https://www.encodeproject.org/experiments/ENCSR429XWK/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR429XWK
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB567JPY

value: chronic myelogenous leukemia (CML)

value: 53 year

value: ENCBS383MFT at ENCODE; https://www.encodeproject.org/ENCBS383MFT/


title: Flow-FISH CRISPR screen from K562 (ENCLB855DMK)

description:
https://www.encodeproject.org/experiments/ENCSR220YCE/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR220YCE
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB855DMK
size range: 200-210

value: Jesse Engreitz, Stanford

value: ENCBS912IWO at ENCODE; https://www.encodeproject.org/ENCBS912IWO/


title: Flow-FISH CRISPR screen from K562 (ENCLB759YAK)

description:
https://www.encodeproject.org/experiments/ENCSR431BSG/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR431BSG
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB759YAK
size range: 200-210

value: ENCBS335MXN at ENCODE; https://www.encodeproject.org/ENCBS335MXN/


title: DNase-seq from activated CD4-positive, alpha-beta T cell (ENCLB122FLA)

description:
https://www.encodeproject.org/experiments/ENCSR216AOU/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR216AOU
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB122FLA

source_name: Homo sapiens female adult (33 years) activated CD4-positive, alpha-beta T primary cell treated with anti-CD3 and anti-CD28 coated beads for 1 hour, 100 ng/mL TNF-alpha for 1 hour

value: primary cell

value: John Stamatoyannopoulos, UW

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody; duration:1; duration_units:hour; treatment_term_id:UniProtKB:P01375; treatment_term_name:TNF-alpha; treatment_type:protein; duration:1; duration_units:hour;

value: ENCBS960YMT at ENCODE; https://www.encodeproject.org/ENCBS960YMT/


title: Flow-FISH CRISPR screen from K562 (ENCLB217CGL)

description:
https://www.encodeproject.org/experiments/ENCSR426GWZ/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR426GWZ
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB217CGL
size range: 200-210

value: cell line

value: female

value: adult

value: ATCC

value: ENCBS178DWI at ENCODE; https://www.encodeproject.org/ENCBS178DWI/


title: DNase-seq from stimulated activated CD4-positive, alpha-beta T cell (ENCLB911DIG)

description:
https://www.encodeproject.org/experiments/ENCSR215NSJ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR215NSJ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB911DIG

source_name: Homo sapiens male adult (42 years) stimulated activated CD4-positive, alpha-beta T primary cell treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 100 ng/mL Interleukin-2 for 24 hours

value: male

value: 42 year

value: AllCells

value: treatment_term_name:anti-CD3 and anti-CD28 coated beads; treatment_type:antibody; duration:24; duration_units:hour; treatment_term_id:UniProtKB:P60568; treatment_term_name:Interleukin-2; treatment_type:protein; duration:24; duration_units:hour;

value: ENCBS582UKI at ENCODE; https://www.encodeproject.org/ENCBS582UKI/


title: Flow-FISH CRISPR screen from K562 (ENCLB206ZHX)

description:
https://www.encodeproject.org/experiments/ENCSR426GWZ/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR426GWZ
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB206ZHX
size range: 200-210

value: chronic myelogenous leukemia (CML)

value: 53 year

value: Jesse Engreitz, Stanford

value: ENCBS698CQL at ENCODE; https://www.encodeproject.org/ENCBS698CQL/


title: Flow-FISH CRISPR screen from K562 (ENCLB492ZWL)

description:
https://www.encodeproject.org/experiments/ENCSR431BSG/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR431BSG
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB492ZWL
size range: 200-210

value: ENCBS335MXN at ENCODE; https://www.encodeproject.org/ENCBS335MXN/


title: DNase-seq from CD4-positive, alpha-beta T cell (ENCLB342ZEE)

description:
https://www.encodeproject.org/experiments/ENCSR215LLE/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR215LLE
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB342ZEE

source_name: Homo sapiens female adult (34 years) CD4-positive, alpha-beta T primary cell

value: CD4-positive, alpha-beta T cell

value: primary cell

value: 34 year

value: John Stamatoyannopoulos, UW

value: ENCBS562XCP at ENCODE; https://www.encodeproject.org/ENCBS562XCP/


title: Flow-FISH CRISPR screen from K562 (ENCLB462TLA)

description:
https://www.encodeproject.org/experiments/ENCSR426GWZ/
***************
biological replicate number: 1
technical replicate number: 3
description:
experiment encode accession: ENCSR426GWZ
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB462TLA
size range: 200-210

value: cell line

value: female

value: adult

value: ATCC


title: DNase-seq from left colon (ENCLB896ZHZ)

description:
https://www.encodeproject.org/experiments/ENCSR429DOY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR429DOY
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB896ZHZ

source_name: Homo sapiens female adult (46 years) left colon tissue

value: left colon

value: tissue

value: DM:no; HTN:no; CAD:no

value: 46 year

value: Shin Lin

value: ENCBS918DKX at ENCODE; https://www.encodeproject.org/ENCBS918DKX/


title: Flow-FISH CRISPR screen from K562 (ENCLB587GPR)

description:
https://www.encodeproject.org/experiments/ENCSR426GWZ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR426GWZ
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB587GPR
size range: 200-210

value: chronic myelogenous leukemia (CML)

value: 53 year

value: Jesse Engreitz, Stanford

value: ENCBS178DWI at ENCODE; https://www.encodeproject.org/ENCBS178DWI/


title: Flow-FISH CRISPR screen from K562 (ENCLB403UZD)

description:
https://www.encodeproject.org/experiments/ENCSR426GWZ/
***************
biological replicate number: 2
technical replicate number: 4
description:
experiment encode accession: ENCSR426GWZ
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB403UZD
size range: 200-210

value: ENCBS698CQL at ENCODE; https://www.encodeproject.org/ENCBS698CQL/


title: Flow-FISH CRISPR screen from K562 (ENCLB971YFK)

description:
https://www.encodeproject.org/experiments/ENCSR426GWZ/
***************
biological replicate number: 2
technical replicate number: 2
description:
experiment encode accession: ENCSR426GWZ
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB971YFK
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB722VTG)

description:
https://www.encodeproject.org/experiments/ENCSR426GWZ/
***************
biological replicate number: 1
technical replicate number: 4
description:
experiment encode accession: ENCSR426GWZ
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB722VTG
size range: 200-210


title: Flow-FISH CRISPR screen from K562 (ENCLB731EMI)

description:
https://www.encodeproject.org/experiments/ENCSR426GWZ/
***************
biological replicate number: 2
technical replicate number: 3
description:
experiment encode accession: ENCSR426GWZ
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2021-01-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB731EMI
size range: 200-210


title: DNase-seq from pancreas (ENCLB169UAL)

description:
https://www.encodeproject.org/experiments/ENCSR426DTX/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR426DTX
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB169UAL

source_name: Homo sapiens female adult (61 years) pancreas tissue

value: pancreas

value: DM:no; HTN:no; CAD:no; lungs with moderate emphysema

value: 61 year

value: John Stamatoyannopoulos, UW

value: ENCBS932MTD at ENCODE; https://www.encodeproject.org/ENCBS932MTD/


title: Flow-FISH CRISPR screen from GM12878 (ENCLB393AAY)

description:
https://www.encodeproject.org/experiments/ENCSR214PXB/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR214PXB
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2022-05-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB393AAY
size range: 200-210

source_name: Homo sapiens GM12878 cell line genetically modified (insertion) using transduction, genetically modified using CRISPRi (sgRNA)

value: cell line

value: female

value: unknown

value: adult

value: ATCC

value: ENCBS299NJO at ENCODE; https://www.encodeproject.org/ENCBS299NJO/


title: DNase-seq from pancreas (ENCLB033QZX)

description:
https://www.encodeproject.org/experiments/ENCSR426DTX/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR426DTX
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB033QZX

value: tissue

value: Shin Lin

value: ENCBS660PJF at ENCODE; https://www.encodeproject.org/ENCBS660PJF/


title: Flow-FISH CRISPR screen from GM12878 (ENCLB917HWS)

description:
https://www.encodeproject.org/experiments/ENCSR214PXB/
***************
biological replicate number: 2
technical replicate number: 2
description:
experiment encode accession: ENCSR214PXB
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2022-05-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB917HWS
size range: 200-210

value: Jesse Engreitz, Stanford

value: ENCBS760WBV at ENCODE; https://www.encodeproject.org/ENCBS760WBV/


title: Flow-FISH CRISPR screen from GM12878 (ENCLB553OMA)

description:
https://www.encodeproject.org/experiments/ENCSR214PXB/
***************
biological replicate number: 2
technical replicate number: 3
description:
experiment encode accession: ENCSR214PXB
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2022-05-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB553OMA
size range: 200-210


title: Flow-FISH CRISPR screen from GM12878 (ENCLB888PMN)

description:
https://www.encodeproject.org/experiments/ENCSR214PXB/
***************
biological replicate number: 1
technical replicate number: 4
description:
experiment encode accession: ENCSR214PXB
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2022-05-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB888PMN
size range: 200-210


title: Flow-FISH CRISPR screen from GM12878 (ENCLB956JXF)

description:
https://www.encodeproject.org/experiments/ENCSR214PXB/
***************
biological replicate number: 1
technical replicate number: 3
description:
experiment encode accession: ENCSR214PXB
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2022-05-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB956JXF
size range: 200-210


title: Flow-FISH CRISPR screen from GM12878 (ENCLB776RMP)

description:
https://www.encodeproject.org/experiments/ENCSR214PXB/
***************
biological replicate number: 2
technical replicate number: 4
description:
experiment encode accession: ENCSR214PXB
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2022-05-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB776RMP
size range: 200-210


title: Flow-FISH CRISPR screen from GM12878 (ENCLB989MQT)

description:
https://www.encodeproject.org/experiments/ENCSR214PXB/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR214PXB
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2022-05-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB989MQT
size range: 200-210


title: Flow-FISH CRISPR screen from GM12878 (ENCLB221PJW)

description:
https://www.encodeproject.org/experiments/ENCSR214PXB/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR214PXB
assay title: Flow-FISH CRISPR screen
assembly: hg19
encode release date: 2022-05-07
lab: Jesse Engreitz, Stanford
library encode accession: ENCLB221PJW
size range: 200-210


title: DNase-seq from K562 (ENCLB862JIP)

description:
https://www.encodeproject.org/experiments/ENCSR425QOB/
***************
biological replicate number: 4
technical replicate number: 1
description:
experiment encode accession: ENCSR425QOB
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-30
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB862JIP

value: chronic myelogenous leukemia (CML)

value: 53 year

value: ENCBS914NLV at ENCODE; https://www.encodeproject.org/ENCBS914NLV/