title: snRNA-seq from layer of hippocampus (ENCLB336PDA)

description:
https://www.encodeproject.org/experiments/ENCSR940VCU/
***************
biological replicate number: 1
technical replicate number: 4
description: Illumina short-read B6/Cast F1 hippocampus P36 male normal 12k
experiment encode accession: ENCSR940VCU
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB336PDA

value: tissue

value: B6/Cast F1 hippocampus P36 male 1

value: The Jackson Laboratory

value: ENCBS894OAU at ENCODE; https://www.encodeproject.org/ENCBS894OAU/


title: snRNA-seq from layer of hippocampus (ENCLB297BXW)

status: Public on Mar 06 2026

type: SRA

city: Stanford

first: ENCODE

last: DCC

state: CA

address: 300 Pasteur Dr

country: USA

institute: ENCODE DCC

description:
https://www.encodeproject.org/experiments/ENCSR940VCU/
***************
biological replicate number: 1
technical replicate number: 2
description: Illumina short-read B6/Cast F1 hippocampus P36 male normal 12k
experiment encode accession: ENCSR940VCU
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB297BXW

library_source: transcriptomic

data_processing: See GSM*_README.txt supplementary file linked below

molecule: total RNA

organism: Mus musculus

source_name: Mus musculus strain B6CASTF1/J male postnatal (36 days) layer of hippocampus tissue nuclear fraction

value: layer of hippocampus

tag: description

tag: biosample encode accession

tag: Sex

value: male

tag: dev stage

value: postnatal

tag: age

value: 36 day

tag: lab

value: Ali Mortazavi, UCI

tag: subcellular fraction term name

value: nucleus

tag: source

tag: link

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from layer of hippocampus (ENCLB627FYJ)

description:
https://www.encodeproject.org/experiments/ENCSR940VCU/
***************
biological replicate number: 1
technical replicate number: 3
description: Illumina short-read B6/Cast F1 hippocampus P36 male normal 12k
experiment encode accession: ENCSR940VCU
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB627FYJ


title: snRNA-seq from adrenal gland (ENCLB151UGB)

description:
https://www.encodeproject.org/experiments/ENCSR943REW/
***************
biological replicate number: 1
technical replicate number: 2
description: Illumina short-read 5xFAD/Cast F1 adrenal P8mo male 8mo 12k
experiment encode accession: ENCSR943REW
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB151UGB

source_name: Mus musculus strain 5xFAD/CAST male adult (8 months) adrenal gland tissue nuclear fraction

value: adrenal gland

value: 5xFAD/Cast F1 adrenal P8mo male 1

value: adult

value: 8 month

value: ENCBS807DYE at ENCODE; https://www.encodeproject.org/ENCBS807DYE/

value: Derived from ENCODE donor ENCDO996MUL; https://www.encodeproject.org/ENCDO996MUL/


title: snRNA-seq from layer of hippocampus (ENCLB055PXE)

description:
https://www.encodeproject.org/experiments/ENCSR940VCU/
***************
biological replicate number: 2
technical replicate number: 5
description: Illumina short-read B6/Cast F1 hippocampus P36 male normal 12k
experiment encode accession: ENCSR940VCU
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB055PXE

value: tissue

value: B6/Cast F1 hippocampus P36 male 2

value: ENCBS373BVD at ENCODE; https://www.encodeproject.org/ENCBS373BVD/


title: snRNA-seq from layer of hippocampus (ENCLB141FJQ)

description:
https://www.encodeproject.org/experiments/ENCSR940VCU/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 hippocampus P36 male normal 12k
experiment encode accession: ENCSR940VCU
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB141FJQ

value: The Jackson Laboratory


title: snRNA-seq from layer of hippocampus (ENCLB659CIS)

description:
https://www.encodeproject.org/experiments/ENCSR940VCU/
***************
biological replicate number: 1
technical replicate number: 5
description: Illumina short-read B6/Cast F1 hippocampus P36 male normal 12k
experiment encode accession: ENCSR940VCU
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB659CIS

value: layer of hippocampus

value: B6/Cast F1 hippocampus P36 male 1

value: ENCBS894OAU at ENCODE; https://www.encodeproject.org/ENCBS894OAU/


title: snRNA-seq from layer of hippocampus (ENCLB521TPO)

description:
https://www.encodeproject.org/experiments/ENCSR940VCU/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 hippocampus P36 male normal 12k
experiment encode accession: ENCSR940VCU
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB521TPO

value: male

value: postnatal

value: 36 day


title: snRNA-seq from adrenal gland (ENCLB879UGT)

description:
https://www.encodeproject.org/experiments/ENCSR982GYD/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 adrenal P18-20mo male normal 2k
experiment encode accession: ENCSR982GYD
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB879UGT
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

source_name: Mus musculus strain B6CASTF1/J male adult (18-20 months) adrenal gland tissue nuclear fraction

value: B6/Cast F1 adrenal P18-20mo male 1

value: 18-20 month

value: Ali Mortazavi, UCI

value: nucleus

value: ENCBS621RNE at ENCODE; https://www.encodeproject.org/ENCBS621RNE/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from layer of hippocampus (ENCLB438CYW)

description:
https://www.encodeproject.org/experiments/ENCSR940VCU/
***************
biological replicate number: 2
technical replicate number: 4
description: Illumina short-read B6/Cast F1 hippocampus P36 male normal 12k
experiment encode accession: ENCSR940VCU
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB438CYW


title: snRNA-seq from layer of hippocampus (ENCLB139TJO)

description:
https://www.encodeproject.org/experiments/ENCSR940VCU/
***************
biological replicate number: 2
technical replicate number: 2
description: Illumina short-read B6/Cast F1 hippocampus P36 male normal 12k
experiment encode accession: ENCSR940VCU
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB139TJO


title: snRNA-seq from heart (ENCLB329OPQ)

description:
https://www.encodeproject.org/experiments/ENCSR938YKJ/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 heart P14 female normal 12k
experiment encode accession: ENCSR938YKJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB329OPQ

source_name: Mus musculus strain B6CASTF1/J female postnatal (14 days) heart tissue nuclear fraction

value: heart

value: B6/Cast F1 heart P14 female 1

value: female

value: 14 day

value: ENCBS598PEZ at ENCODE; https://www.encodeproject.org/ENCBS598PEZ/


title: snRNA-seq from heart (ENCLB633MFB)

description:
https://www.encodeproject.org/experiments/ENCSR938YKJ/
***************
biological replicate number: 1
technical replicate number: 3
description: Illumina short-read B6/Cast F1 heart P14 female normal 12k
experiment encode accession: ENCSR938YKJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB633MFB

value: tissue

value: The Jackson Laboratory


title: snRNA-seq from heart (ENCLB030PDX)

description:
https://www.encodeproject.org/experiments/ENCSR938YKJ/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 heart P14 female normal 12k
experiment encode accession: ENCSR938YKJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB030PDX

value: B6/Cast F1 heart P14 female 2

value: ENCBS099STV at ENCODE; https://www.encodeproject.org/ENCBS099STV/


title: snRNA-seq from heart (ENCLB673YCU)

description:
https://www.encodeproject.org/experiments/ENCSR938YKJ/
***************
biological replicate number: 2
technical replicate number: 4
description: Illumina short-read B6/Cast F1 heart P14 female normal 12k
experiment encode accession: ENCSR938YKJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB673YCU

value: postnatal


title: snRNA-seq from heart (ENCLB243EIX)

description:
https://www.encodeproject.org/experiments/ENCSR938YKJ/
***************
biological replicate number: 2
technical replicate number: 3
description: Illumina short-read B6/Cast F1 heart P14 female normal 12k
experiment encode accession: ENCSR938YKJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB243EIX


title: snRNA-seq from gastrocnemius (ENCLB464BTH)

description:
https://www.encodeproject.org/experiments/ENCSR930FUM/
***************
biological replicate number: 2
technical replicate number: 3
description: Illumina short-read B6/Cast F1 gastrocnemius P4 male normal 12k
experiment encode accession: ENCSR930FUM
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB464BTH

source_name: Mus musculus strain B6CASTF1/J male postnatal (4 days) gastrocnemius tissue nuclear fraction

value: gastrocnemius

value: B6/Cast F1 gastrocnemius P4 male 2

value: male

value: 4 day

value: ENCBS373TUO at ENCODE; https://www.encodeproject.org/ENCBS373TUO/


title: snRNA-seq from gastrocnemius (ENCLB048ZIP)

description:
https://www.encodeproject.org/experiments/ENCSR930FUM/
***************
biological replicate number: 1
technical replicate number: 5
description: Illumina short-read B6/Cast F1 gastrocnemius P4 male normal 12k
experiment encode accession: ENCSR930FUM
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB048ZIP

value: B6/Cast F1 gastrocnemius P4 male 1

value: Ali Mortazavi, UCI

value: nucleus

value: ENCBS965EFJ at ENCODE; https://www.encodeproject.org/ENCBS965EFJ/


title: snRNA-seq from heart (ENCLB381XIC)

description:
https://www.encodeproject.org/experiments/ENCSR938YKJ/
***************
biological replicate number: 1
technical replicate number: 2
description: Illumina short-read B6/Cast F1 heart P14 female normal 12k
experiment encode accession: ENCSR938YKJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB381XIC

value: heart

value: B6/Cast F1 heart P14 female 1

value: female

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from heart (ENCLB608FDH)

description:
https://www.encodeproject.org/experiments/ENCSR938YKJ/
***************
biological replicate number: 2
technical replicate number: 2
description: Illumina short-read B6/Cast F1 heart P14 female normal 12k
experiment encode accession: ENCSR938YKJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB608FDH

value: tissue

value: 14 day

value: The Jackson Laboratory


title: snRNA-seq from gastrocnemius (ENCLB481EFQ)

description:
https://www.encodeproject.org/experiments/ENCSR930FUM/
***************
biological replicate number: 1
technical replicate number: 4
description: Illumina short-read B6/Cast F1 gastrocnemius P4 male normal 12k
experiment encode accession: ENCSR930FUM
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB481EFQ

value: postnatal


title: snRNA-seq from gastrocnemius (ENCLB273IOZ)

description:
https://www.encodeproject.org/experiments/ENCSR930FUM/
***************
biological replicate number: 1
technical replicate number: 3
description: Illumina short-read B6/Cast F1 gastrocnemius P4 male normal 12k
experiment encode accession: ENCSR930FUM
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB273IOZ

value: gastrocnemius


title: snRNA-seq from gastrocnemius (ENCLB783MXI)

description:
https://www.encodeproject.org/experiments/ENCSR930FUM/
***************
biological replicate number: 2
technical replicate number: 2
description: Illumina short-read B6/Cast F1 gastrocnemius P4 male normal 12k
experiment encode accession: ENCSR930FUM
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB783MXI

value: B6/Cast F1 gastrocnemius P4 male 2


title: snRNA-seq from gastrocnemius (ENCLB201GIH)

description:
https://www.encodeproject.org/experiments/ENCSR928UPG/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 gastrocnemius P4 female normal 1k
experiment encode accession: ENCSR928UPG
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB201GIH
nucleic acid starting quantity: 42
nucleic acid starting quantity units: cells

source_name: Mus musculus strain B6CASTF1/J female postnatal (4 days) gastrocnemius tissue nuclear fraction

value: B6/Cast F1 gastrocnemius P4 female 2

value: ENCBS521SGC at ENCODE; https://www.encodeproject.org/ENCBS521SGC/


title: snRNA-seq from heart (ENCLB423MTY)

description:
https://www.encodeproject.org/experiments/ENCSR938YKJ/
***************
biological replicate number: 1
technical replicate number: 4
description: Illumina short-read B6/Cast F1 heart P14 female normal 12k
experiment encode accession: ENCSR938YKJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB423MTY

value: ENCBS598PEZ at ENCODE; https://www.encodeproject.org/ENCBS598PEZ/


title: snRNA-seq from gastrocnemius (ENCLB859VMO)

description:
https://www.encodeproject.org/experiments/ENCSR930FUM/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 gastrocnemius P4 male normal 12k
experiment encode accession: ENCSR930FUM
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB859VMO

value: B6/Cast F1 gastrocnemius P4 male 1

value: male

value: 4 day


title: snRNA-seq from gastrocnemius (ENCLB114FSY)

description:
https://www.encodeproject.org/experiments/ENCSR927BSJ/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 gastrocnemius P18-20mo female normal 12k
experiment encode accession: ENCSR927BSJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB114FSY

source_name: Mus musculus strain B6CASTF1/J female adult (18-20 months) gastrocnemius tissue nuclear fraction

value: B6/Cast F1 gastrocnemius P18-20mo female 1

value: adult

value: 18-20 month

value: Ali Mortazavi, UCI

value: nucleus

value: ENCBS613QQM at ENCODE; https://www.encodeproject.org/ENCBS613QQM/


title: snRNA-seq from gastrocnemius (ENCLB419GUG)

description:
https://www.encodeproject.org/experiments/ENCSR927BSJ/
***************
biological replicate number: 1
technical replicate number: 4
description: Illumina short-read B6/Cast F1 gastrocnemius P18-20mo female normal 12k
experiment encode accession: ENCSR927BSJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB419GUG

value: tissue

value: female

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from gastrocnemius (ENCLB271PNW)

description:
https://www.encodeproject.org/experiments/ENCSR927BSJ/
***************
biological replicate number: 2
technical replicate number: 2
description: Illumina short-read B6/Cast F1 gastrocnemius P18-20mo female normal 12k
experiment encode accession: ENCSR927BSJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB271PNW

value: gastrocnemius

value: B6/Cast F1 gastrocnemius P18-20mo female 2

value: The Jackson Laboratory

value: ENCBS743KNR at ENCODE; https://www.encodeproject.org/ENCBS743KNR/


title: snRNA-seq from gastrocnemius (ENCLB642WTU)

description:
https://www.encodeproject.org/experiments/ENCSR928UPG/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 gastrocnemius P4 female normal 1k
experiment encode accession: ENCSR928UPG
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB642WTU
nucleic acid starting quantity: 42
nucleic acid starting quantity units: cells

value: B6/Cast F1 gastrocnemius P4 female 1

value: postnatal

value: ENCBS443FTE at ENCODE; https://www.encodeproject.org/ENCBS443FTE/


title: snRNA-seq from gastrocnemius (ENCLB572PNU)

description:
https://www.encodeproject.org/experiments/ENCSR930FUM/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 gastrocnemius P4 male normal 12k
experiment encode accession: ENCSR930FUM
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB572PNU

value: B6/Cast F1 gastrocnemius P4 male 2

value: male

value: 4 day

value: ENCBS373TUO at ENCODE; https://www.encodeproject.org/ENCBS373TUO/


title: snRNA-seq from gastrocnemius (ENCLB155AFY)

description:
https://www.encodeproject.org/experiments/ENCSR927BSJ/
***************
biological replicate number: 2
technical replicate number: 4
description: Illumina short-read B6/Cast F1 gastrocnemius P18-20mo female normal 12k
experiment encode accession: ENCSR927BSJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB155AFY

value: adult

value: 18-20 month

value: Ali Mortazavi, UCI


title: snRNA-seq from gastrocnemius (ENCLB678VCV)

description:
https://www.encodeproject.org/experiments/ENCSR930FUM/
***************
biological replicate number: 1
technical replicate number: 2
description: Illumina short-read B6/Cast F1 gastrocnemius P4 male normal 12k
experiment encode accession: ENCSR930FUM
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB678VCV

value: tissue

value: B6/Cast F1 gastrocnemius P4 male 1

value: nucleus

value: ENCBS965EFJ at ENCODE; https://www.encodeproject.org/ENCBS965EFJ/


title: snRNA-seq from gastrocnemius (ENCLB880BOE)

description:
https://www.encodeproject.org/experiments/ENCSR930FUM/
***************
biological replicate number: 2
technical replicate number: 4
description: Illumina short-read B6/Cast F1 gastrocnemius P4 male normal 12k
experiment encode accession: ENCSR930FUM
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB880BOE

value: gastrocnemius

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from gastrocnemius (ENCLB809GJH)

description:
https://www.encodeproject.org/experiments/ENCSR927BSJ/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 gastrocnemius P18-20mo female normal 12k
experiment encode accession: ENCSR927BSJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB809GJH

value: B6/Cast F1 gastrocnemius P18-20mo female 2

value: female

value: The Jackson Laboratory

value: ENCBS743KNR at ENCODE; https://www.encodeproject.org/ENCBS743KNR/


title: snRNA-seq from gastrocnemius (ENCLB325KUC)

description:
https://www.encodeproject.org/experiments/ENCSR927BSJ/
***************
biological replicate number: 2
technical replicate number: 3
description: Illumina short-read B6/Cast F1 gastrocnemius P18-20mo female normal 12k
experiment encode accession: ENCSR927BSJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB325KUC


title: snRNA-seq from gastrocnemius (ENCLB795NWB)

description:
https://www.encodeproject.org/experiments/ENCSR927BSJ/
***************
biological replicate number: 1
technical replicate number: 5
description: Illumina short-read B6/Cast F1 gastrocnemius P18-20mo female normal 12k
experiment encode accession: ENCSR927BSJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB795NWB

value: B6/Cast F1 gastrocnemius P18-20mo female 1

value: ENCBS613QQM at ENCODE; https://www.encodeproject.org/ENCBS613QQM/


title: snRNA-seq from gastrocnemius (ENCLB341UBF)

description:
https://www.encodeproject.org/experiments/ENCSR930FUM/
***************
biological replicate number: 2
technical replicate number: 5
description: Illumina short-read B6/Cast F1 gastrocnemius P4 male normal 12k
experiment encode accession: ENCSR930FUM
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB341UBF

value: B6/Cast F1 gastrocnemius P4 male 2

value: male

value: postnatal

value: 4 day


title: snRNA-seq from gastrocnemius (ENCLB740EBL)

description:
https://www.encodeproject.org/experiments/ENCSR927BSJ/
***************
biological replicate number: 2
technical replicate number: 5
description: Illumina short-read B6/Cast F1 gastrocnemius P18-20mo female normal 12k
experiment encode accession: ENCSR927BSJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB740EBL

value: adult

value: 18-20 month

value: Ali Mortazavi, UCI


title: snRNA-seq from gastrocnemius (ENCLB341KIR)

description:
https://www.encodeproject.org/experiments/ENCSR927BSJ/
***************
biological replicate number: 1
technical replicate number: 2
description: Illumina short-read B6/Cast F1 gastrocnemius P18-20mo female normal 12k
experiment encode accession: ENCSR927BSJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB341KIR

value: tissue

value: nucleus


title: snRNA-seq from gastrocnemius (ENCLB874IMM)

description:
https://www.encodeproject.org/experiments/ENCSR927BSJ/
***************
biological replicate number: 1
technical replicate number: 3
description: Illumina short-read B6/Cast F1 gastrocnemius P18-20mo female normal 12k
experiment encode accession: ENCSR927BSJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB874IMM

value: gastrocnemius


title: snRNA-seq from adrenal gland (ENCLB645TFC)

description:
https://www.encodeproject.org/experiments/ENCSR918LWU/
***************
biological replicate number: 1
technical replicate number: 2
description: Illumina short-read B6/Cast F1 adrenal P8mo female 8mo 12k
experiment encode accession: ENCSR918LWU
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB645TFC

source_name: Mus musculus strain B6CASTF1/J female adult (8 months) adrenal gland tissue nuclear fraction

value: adrenal gland

value: B6/Cast F1 adrenal P8mo female 1

value: 8 month

value: ENCBS757FVH at ENCODE; https://www.encodeproject.org/ENCBS757FVH/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from adrenal gland (ENCLB318SYJ)

description:
https://www.encodeproject.org/experiments/ENCSR918LWU/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 adrenal P8mo female 8mo 12k
experiment encode accession: ENCSR918LWU
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB318SYJ

value: B6/Cast F1 adrenal P8mo female 2

value: female

value: The Jackson Laboratory

value: ENCBS232ZXV at ENCODE; https://www.encodeproject.org/ENCBS232ZXV/


title: snRNA-seq from layer of hippocampus (ENCLB233DSJ)

description:
https://www.encodeproject.org/experiments/ENCSR926QCE/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 hippocampus P36 male ont_match 2k
experiment encode accession: ENCSR926QCE
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB233DSJ
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

value: layer of hippocampus

value: B6/Cast F1 hippocampus P36 male 1

value: male

value: postnatal

value: 36 day

value: ENCBS894OAU at ENCODE; https://www.encodeproject.org/ENCBS894OAU/


title: snRNA-seq from adrenal gland (ENCLB830ENZ)

description:
https://www.encodeproject.org/experiments/ENCSR918LWU/
***************
biological replicate number: 2
technical replicate number: 3
description: Illumina short-read B6/Cast F1 adrenal P8mo female 8mo 12k
experiment encode accession: ENCSR918LWU
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB830ENZ

value: tissue

value: adult

value: Ali Mortazavi, UCI

value: nucleus


title: snRNA-seq from layer of hippocampus (ENCLB033ZJD)

description:
https://www.encodeproject.org/experiments/ENCSR926QCE/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 hippocampus P36 male ont_match 2k
experiment encode accession: ENCSR926QCE
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB033ZJD
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

value: B6/Cast F1 hippocampus P36 male 2

value: ENCBS373BVD at ENCODE; https://www.encodeproject.org/ENCBS373BVD/


title: snRNA-seq from gastrocnemius (ENCLB337GLO)

description:
https://www.encodeproject.org/experiments/ENCSR921SBQ/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 gastrocnemius P10 female normal 1k
experiment encode accession: ENCSR921SBQ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB337GLO
nucleic acid starting quantity: 21
nucleic acid starting quantity units: cells

source_name: Mus musculus strain B6CASTF1/J female postnatal (10 days) gastrocnemius tissue nuclear fraction

value: gastrocnemius

value: B6/Cast F1 gastrocnemius P10 female 1

value: 10 day

value: ENCBS180IZM at ENCODE; https://www.encodeproject.org/ENCBS180IZM/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from adrenal gland (ENCLB873JII)

description:
https://www.encodeproject.org/experiments/ENCSR918LWU/
***************
biological replicate number: 2
technical replicate number: 2
description: Illumina short-read B6/Cast F1 adrenal P8mo female 8mo 12k
experiment encode accession: ENCSR918LWU
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB873JII

value: adrenal gland

value: B6/Cast F1 adrenal P8mo female 2

value: female

value: 8 month

value: The Jackson Laboratory

value: ENCBS232ZXV at ENCODE; https://www.encodeproject.org/ENCBS232ZXV/


title: snRNA-seq from adrenal gland (ENCLB154IPS)

description:
https://www.encodeproject.org/experiments/ENCSR918LWU/
***************
biological replicate number: 1
technical replicate number: 6
description: Illumina short-read B6/Cast F1 adrenal P8mo female 8mo 12k
experiment encode accession: ENCSR918LWU
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB154IPS

value: tissue

value: B6/Cast F1 adrenal P8mo female 1

value: ENCBS757FVH at ENCODE; https://www.encodeproject.org/ENCBS757FVH/


title: snRNA-seq from adrenal gland (ENCLB120YQW)

description:
https://www.encodeproject.org/experiments/ENCSR918LWU/
***************
biological replicate number: 2
technical replicate number: 4
description: Illumina short-read B6/Cast F1 adrenal P8mo female 8mo 12k
experiment encode accession: ENCSR918LWU
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB120YQW

value: adult

value: Ali Mortazavi, UCI

value: nucleus


title: snRNA-seq from adrenal gland (ENCLB755TMU)

description:
https://www.encodeproject.org/experiments/ENCSR918LWU/
***************
biological replicate number: 2
technical replicate number: 5
description: Illumina short-read B6/Cast F1 adrenal P8mo female 8mo 12k
experiment encode accession: ENCSR918LWU
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB755TMU


title: snRNA-seq from adrenal gland (ENCLB628WRQ)

description:
https://www.encodeproject.org/experiments/ENCSR918LWU/
***************
biological replicate number: 1
technical replicate number: 4
description: Illumina short-read B6/Cast F1 adrenal P8mo female 8mo 12k
experiment encode accession: ENCSR918LWU
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB628WRQ


title: snRNA-seq from gastrocnemius (ENCLB503IXH)

description:
https://www.encodeproject.org/experiments/ENCSR908PNN/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 gastrocnemius P2mo female normal 1k
experiment encode accession: ENCSR908PNN
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB503IXH
nucleic acid starting quantity: 42
nucleic acid starting quantity units: cells

source_name: Mus musculus strain B6CASTF1/J female adult (2 months) gastrocnemius tissue nuclear fraction

value: gastrocnemius

value: B6/Cast F1 gastrocnemius P2mo female 2

value: 2 month

value: ENCBS837MZQ at ENCODE; https://www.encodeproject.org/ENCBS837MZQ/


title: snRNA-seq from gastrocnemius (ENCLB519CDG)

description:
https://www.encodeproject.org/experiments/ENCSR908PNN/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 gastrocnemius P2mo female normal 1k
experiment encode accession: ENCSR908PNN
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB519CDG
nucleic acid starting quantity: 42
nucleic acid starting quantity units: cells

value: B6/Cast F1 gastrocnemius P2mo female 1

value: ENCBS880FWQ at ENCODE; https://www.encodeproject.org/ENCBS880FWQ/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from adrenal gland (ENCLB975SSO)

description:
https://www.encodeproject.org/experiments/ENCSR918LWU/
***************
biological replicate number: 2
technical replicate number: 6
description: Illumina short-read B6/Cast F1 adrenal P8mo female 8mo 12k
experiment encode accession: ENCSR918LWU
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB975SSO

value: adrenal gland

value: B6/Cast F1 adrenal P8mo female 2

value: female


title: snRNA-seq from heart (ENCLB031EQW)

description:
https://www.encodeproject.org/experiments/ENCSR906KCJ/
***************
biological replicate number: 1
technical replicate number: 3
description: Illumina short-read B6/Cast F1 heart P25 female normal 12k
experiment encode accession: ENCSR906KCJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB031EQW

source_name: Mus musculus strain B6CASTF1/J female postnatal (25 days) heart tissue nuclear fraction

value: heart

value: B6/Cast F1 heart P25 female 1

value: postnatal

value: 25 day

value: The Jackson Laboratory

value: ENCBS961MPB at ENCODE; https://www.encodeproject.org/ENCBS961MPB/


title: snRNA-seq from gastrocnemius (ENCLB778PIZ)

description:
https://www.encodeproject.org/experiments/ENCSR921SBQ/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 gastrocnemius P10 female normal 1k
experiment encode accession: ENCSR921SBQ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB778PIZ
nucleic acid starting quantity: 21
nucleic acid starting quantity units: cells

value: tissue

value: B6/Cast F1 gastrocnemius P10 female 2

value: 10 day

value: Ali Mortazavi, UCI

value: nucleus

value: ENCBS933EVB at ENCODE; https://www.encodeproject.org/ENCBS933EVB/


title: snRNA-seq from adrenal gland (ENCLB894QGL)

description:
https://www.encodeproject.org/experiments/ENCSR918LWU/
***************
biological replicate number: 1
technical replicate number: 5
description: Illumina short-read B6/Cast F1 adrenal P8mo female 8mo 12k
experiment encode accession: ENCSR918LWU
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB894QGL

value: B6/Cast F1 adrenal P8mo female 1

value: adult

value: 8 month

value: ENCBS757FVH at ENCODE; https://www.encodeproject.org/ENCBS757FVH/


title: snRNA-seq from heart (ENCLB736MWB)

description:
https://www.encodeproject.org/experiments/ENCSR906KCJ/
***************
biological replicate number: 1
technical replicate number: 2
description: Illumina short-read B6/Cast F1 heart P25 female normal 12k
experiment encode accession: ENCSR906KCJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB736MWB

value: female

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: Arabidopsis, 2-week-old, bpc1 single mutant rep2

status: Public on Mar 07 2026

city: Anseong

first: Eojin

last: Cho

address: Seodong-daero, Daedeok-myeon

department: Plant Science and Technology

country: South Korea

institute: College of Biotechnology, Chung-Ang University

description: Library name: Sample 2

data_processing:
Raw FASTQ reads were trimmed and quality-filtered
Alignment to A. thaliana TAIR10 genome was performed using Tophat2
Assembly: A. thaliana TAIR10 reference genome
Supplementary files format and content: Genome-wide RNA-seq read coverage tracks generated from paired-end BAM files using RPKM normalization (bin size = 10 bp).

organism: Arabidopsis thaliana

source_name: seedlings

growth_protocol: Seeds were sterilized with 1.5% bleach solution and stratified for 3 days at 4 ℃, then germinated and grown under long day condition (16-h light/8-h dark) at 22 ˚C.

extract_protocol:
RNA was harvedsted using RNeasy Plant mini kit (QIAGEN, USA) according to the manufacturer's instructions.
RNA libraries for RNA-seq werer prepared using TruSeq Stranded mRNA Library prep Kit following manufacturer's protocols.

treatment_protocol: Seedling were 2-weed old

tag: tissue

value: seedlings

tag: genotype

value: BPC1 knockout


title: snRNA-seq from adrenal gland (ENCLB700WMZ)

description:
https://www.encodeproject.org/experiments/ENCSR918LWU/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 adrenal P8mo female 8mo 12k
experiment encode accession: ENCSR918LWU
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB700WMZ

value: adrenal gland


title: snRNA-seq from heart (ENCLB043SOF)

description:
https://www.encodeproject.org/experiments/ENCSR906KCJ/
***************
biological replicate number: 2
technical replicate number: 3
description: Illumina short-read B6/Cast F1 heart P25 female normal 12k
experiment encode accession: ENCSR906KCJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB043SOF

value: heart

value: B6/Cast F1 heart P25 female 2

value: postnatal

value: 25 day

value: The Jackson Laboratory

value: ENCBS851DUN at ENCODE; https://www.encodeproject.org/ENCBS851DUN/


title: snRNA-seq from heart (ENCLB747HPG)

description:
https://www.encodeproject.org/experiments/ENCSR906KCJ/
***************
biological replicate number: 1
technical replicate number: 4
description: Illumina short-read B6/Cast F1 heart P25 female normal 12k
experiment encode accession: ENCSR906KCJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB747HPG

value: tissue

value: B6/Cast F1 heart P25 female 1

value: Ali Mortazavi, UCI

value: nucleus

value: ENCBS961MPB at ENCODE; https://www.encodeproject.org/ENCBS961MPB/


title: snRNA-seq from adrenal gland (ENCLB520UGE)

description:
https://www.encodeproject.org/experiments/ENCSR918LWU/
***************
biological replicate number: 1
technical replicate number: 3
description: Illumina short-read B6/Cast F1 adrenal P8mo female 8mo 12k
experiment encode accession: ENCSR918LWU
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB520UGE

value: B6/Cast F1 adrenal P8mo female 1

value: adult

value: 8 month

value: ENCBS757FVH at ENCODE; https://www.encodeproject.org/ENCBS757FVH/


title: snRNA-seq from adrenal gland (ENCLB990FLR)

description:
https://www.encodeproject.org/experiments/ENCSR899EKD/
***************
biological replicate number: 2
technical replicate number: 6
description: Illumina short-read B6/Cast F1 adrenal P18-20mo female normal 12k
experiment encode accession: ENCSR899EKD
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB990FLR

source_name: Mus musculus strain B6CASTF1/J female adult (18-20 months) adrenal gland tissue nuclear fraction

value: B6/Cast F1 adrenal P18-20mo female 2

value: female

value: 18-20 month

value: ENCBS336XYG at ENCODE; https://www.encodeproject.org/ENCBS336XYG/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from heart (ENCLB491APM)

description:
https://www.encodeproject.org/experiments/ENCSR906KCJ/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 heart P25 female normal 12k
experiment encode accession: ENCSR906KCJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB491APM

value: heart

value: postnatal

value: 25 day


title: snRNA-seq from heart (ENCLB411AJA)

description:
https://www.encodeproject.org/experiments/ENCSR906KCJ/
***************
biological replicate number: 2
technical replicate number: 2
description: Illumina short-read B6/Cast F1 heart P25 female normal 12k
experiment encode accession: ENCSR906KCJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB411AJA

value: tissue

value: B6/Cast F1 heart P25 female 2

value: The Jackson Laboratory

value: ENCBS851DUN at ENCODE; https://www.encodeproject.org/ENCBS851DUN/


title: snRNA-seq from heart (ENCLB158VID)

description:
https://www.encodeproject.org/experiments/ENCSR906KCJ/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 heart P25 female normal 12k
experiment encode accession: ENCSR906KCJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB158VID

value: Ali Mortazavi, UCI

value: nucleus


title: snRNA-seq from adrenal gland (ENCLB316RGQ)

description:
https://www.encodeproject.org/experiments/ENCSR899EKD/
***************
biological replicate number: 1
technical replicate number: 5
description: Illumina short-read B6/Cast F1 adrenal P18-20mo female normal 12k
experiment encode accession: ENCSR899EKD
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB316RGQ

value: adrenal gland

value: B6/Cast F1 adrenal P18-20mo female 1

value: adult

value: ENCBS537RFX at ENCODE; https://www.encodeproject.org/ENCBS537RFX/


title: snRNA-seq from adrenal gland (ENCLB489MPA)

description:
https://www.encodeproject.org/experiments/ENCSR899EKD/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 adrenal P18-20mo female normal 12k
experiment encode accession: ENCSR899EKD
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB489MPA

value: B6/Cast F1 adrenal P18-20mo female 2

value: female


title: snRNA-seq from adrenal gland (ENCLB168DYN)

description:
https://www.encodeproject.org/experiments/ENCSR899EKD/
***************
biological replicate number: 2
technical replicate number: 3
description: Illumina short-read B6/Cast F1 adrenal P18-20mo female normal 12k
experiment encode accession: ENCSR899EKD
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB168DYN

value: 18-20 month

value: ENCBS336XYG at ENCODE; https://www.encodeproject.org/ENCBS336XYG/


title: snRNA-seq from adrenal gland (ENCLB178JZF)

description:
https://www.encodeproject.org/experiments/ENCSR899EKD/
***************
biological replicate number: 2
technical replicate number: 5
description: Illumina short-read B6/Cast F1 adrenal P18-20mo female normal 12k
experiment encode accession: ENCSR899EKD
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB178JZF

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from adrenal gland (ENCLB667KEQ)

description:
https://www.encodeproject.org/experiments/ENCSR899EKD/
***************
biological replicate number: 2
technical replicate number: 4
description: Illumina short-read B6/Cast F1 adrenal P18-20mo female normal 12k
experiment encode accession: ENCSR899EKD
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB667KEQ


title: snRNA-seq from adrenal gland (ENCLB894PHB)

description:
https://www.encodeproject.org/experiments/ENCSR899EKD/
***************
biological replicate number: 1
technical replicate number: 6
description: Illumina short-read B6/Cast F1 adrenal P18-20mo female normal 12k
experiment encode accession: ENCSR899EKD
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB894PHB


title: snRNA-seq from adrenal gland (ENCLB630LNK)

description:
https://www.encodeproject.org/experiments/ENCSR899EKD/
***************
biological replicate number: 1
technical replicate number: 2
description: Illumina short-read B6/Cast F1 adrenal P18-20mo female normal 12k
experiment encode accession: ENCSR899EKD
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB630LNK


title: snRNA-seq from adrenal gland (ENCLB673VPB)

description:
https://www.encodeproject.org/experiments/ENCSR899EKD/
***************
biological replicate number: 1
technical replicate number: 4
description: Illumina short-read B6/Cast F1 adrenal P18-20mo female normal 12k
experiment encode accession: ENCSR899EKD
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB673VPB


title: snRNA-seq from adrenal gland (ENCLB059ZLG)

description:
https://www.encodeproject.org/experiments/ENCSR899EKD/
***************
biological replicate number: 2
technical replicate number: 2
description: Illumina short-read B6/Cast F1 adrenal P18-20mo female normal 12k
experiment encode accession: ENCSR899EKD
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB059ZLG


title: snRNA-seq from layer of hippocampus (ENCLB093ZEB)

description:
https://www.encodeproject.org/experiments/ENCSR888TQC/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 hippocampus P10 female ont_match 2k
experiment encode accession: ENCSR888TQC
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB093ZEB
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

source_name: Mus musculus strain B6CASTF1/J female postnatal (10 days) layer of hippocampus tissue nuclear fraction

value: layer of hippocampus

value: B6/Cast F1 hippocampus P10 female 1

value: postnatal

value: 10 day

value: ENCBS830ZRU at ENCODE; https://www.encodeproject.org/ENCBS830ZRU/


title: snRNA-seq from left cerebral cortex (ENCLB547YDV)

description:
https://www.encodeproject.org/experiments/ENCSR883XZK/
***************
biological replicate number: 1
technical replicate number: 5
description: Illumina short-read B6/Cast F1 cortex P18-20mo male normal 12k
experiment encode accession: ENCSR883XZK
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB547YDV

source_name: Mus musculus strain B6CASTF1/J male adult (18-20 months) left cerebral cortex tissue nuclear fraction

value: left cerebral cortex

value: tissue

value: B6/Cast F1 cortex P18-20mo male 1

value: male

value: The Jackson Laboratory

value: ENCBS983SKY at ENCODE; https://www.encodeproject.org/ENCBS983SKY/


title: snRNA-seq from layer of hippocampus (ENCLB767RCV)

description:
https://www.encodeproject.org/experiments/ENCSR888TQC/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 hippocampus P10 female ont_match 2k
experiment encode accession: ENCSR888TQC
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB767RCV
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

value: B6/Cast F1 hippocampus P10 female 2

value: Ali Mortazavi, UCI

value: nucleus

value: ENCBS600VDJ at ENCODE; https://www.encodeproject.org/ENCBS600VDJ/


title: snRNA-seq from left cerebral cortex (ENCLB732IPN)

description:
https://www.encodeproject.org/experiments/ENCSR883XZK/
***************
biological replicate number: 1
technical replicate number: 3
description: Illumina short-read B6/Cast F1 cortex P18-20mo male normal 12k
experiment encode accession: ENCSR883XZK
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB732IPN

value: adult

value: 18-20 month


title: snRNA-seq from layer of hippocampus (ENCLB971YWN)

description:
https://www.encodeproject.org/experiments/ENCSR869HKZ/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 hippocampus P36 female ont_match 2k
experiment encode accession: ENCSR869HKZ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB971YWN
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

source_name: Mus musculus strain B6CASTF1/J female postnatal (36 days) layer of hippocampus tissue nuclear fraction

value: layer of hippocampus

value: B6/Cast F1 hippocampus P36 female 1

value: female

value: 36 day

value: ENCBS462MCF at ENCODE; https://www.encodeproject.org/ENCBS462MCF/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from left cerebral cortex (ENCLB584DIO)

description:
https://www.encodeproject.org/experiments/ENCSR883XZK/
***************
biological replicate number: 2
technical replicate number: 6
description: Illumina short-read B6/Cast F1 cortex P18-20mo male normal 12k
experiment encode accession: ENCSR883XZK
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB584DIO

value: left cerebral cortex

value: tissue

value: B6/Cast F1 cortex P18-20mo male 2

value: ENCBS873TSZ at ENCODE; https://www.encodeproject.org/ENCBS873TSZ/


title: snRNA-seq from left cerebral cortex (ENCLB086IYN)

description:
https://www.encodeproject.org/experiments/ENCSR883XZK/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 cortex P18-20mo male normal 12k
experiment encode accession: ENCSR883XZK
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB086IYN

value: male

value: The Jackson Laboratory


title: snRNA-seq from left cerebral cortex (ENCLB494JPK)

description:
https://www.encodeproject.org/experiments/ENCSR883XZK/
***************
biological replicate number: 1
technical replicate number: 4
description: Illumina short-read B6/Cast F1 cortex P18-20mo male normal 12k
experiment encode accession: ENCSR883XZK
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB494JPK

value: B6/Cast F1 cortex P18-20mo male 1

value: Ali Mortazavi, UCI

value: ENCBS983SKY at ENCODE; https://www.encodeproject.org/ENCBS983SKY/


title: snRNA-seq from adrenal gland (ENCLB403VFD)

description:
https://www.encodeproject.org/experiments/ENCSR899EKD/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 adrenal P18-20mo female normal 12k
experiment encode accession: ENCSR899EKD
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB403VFD

value: adrenal gland

value: B6/Cast F1 adrenal P18-20mo female 1

value: adult

value: nucleus

value: ENCBS537RFX at ENCODE; https://www.encodeproject.org/ENCBS537RFX/


title: snRNA-seq from heart (ENCLB129LFT)

description:
https://www.encodeproject.org/experiments/ENCSR868XSG/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 heart P10 female normal 2k
experiment encode accession: ENCSR868XSG
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB129LFT
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

source_name: Mus musculus strain B6CASTF1/J female postnatal (10 days) heart tissue nuclear fraction

value: heart

value: B6/Cast F1 heart P10 female 1

value: female

value: postnatal

value: 10 day

value: ENCBS550MIB at ENCODE; https://www.encodeproject.org/ENCBS550MIB/


title: snRNA-seq from left cerebral cortex (ENCLB756ZTK)

description:
https://www.encodeproject.org/experiments/ENCSR883XZK/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 cortex P18-20mo male normal 12k
experiment encode accession: ENCSR883XZK
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB756ZTK

value: left cerebral cortex

value: tissue

value: 18-20 month

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from left cerebral cortex (ENCLB728KQB)

description:
https://www.encodeproject.org/experiments/ENCSR883XZK/
***************
biological replicate number: 2
technical replicate number: 2
description: Illumina short-read B6/Cast F1 cortex P18-20mo male normal 12k
experiment encode accession: ENCSR883XZK
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB728KQB

value: B6/Cast F1 cortex P18-20mo male 2

value: male

value: Ali Mortazavi, UCI

value: The Jackson Laboratory

value: ENCBS873TSZ at ENCODE; https://www.encodeproject.org/ENCBS873TSZ/


title: snRNA-seq from left cerebral cortex (ENCLB239NHF)

description:
https://www.encodeproject.org/experiments/ENCSR883XZK/
***************
biological replicate number: 2
technical replicate number: 3
description: Illumina short-read B6/Cast F1 cortex P18-20mo male normal 12k
experiment encode accession: ENCSR883XZK
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB239NHF

value: adult

value: nucleus


title: snRNA-seq from left cerebral cortex (ENCLB073JEC)

description:
https://www.encodeproject.org/experiments/ENCSR883XZK/
***************
biological replicate number: 1
technical replicate number: 2
description: Illumina short-read B6/Cast F1 cortex P18-20mo male normal 12k
experiment encode accession: ENCSR883XZK
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB073JEC

value: B6/Cast F1 cortex P18-20mo male 1

value: ENCBS983SKY at ENCODE; https://www.encodeproject.org/ENCBS983SKY/


title: snRNA-seq from left cerebral cortex (ENCLB688INC)

description:
https://www.encodeproject.org/experiments/ENCSR883XZK/
***************
biological replicate number: 2
technical replicate number: 5
description: Illumina short-read B6/Cast F1 cortex P18-20mo male normal 12k
experiment encode accession: ENCSR883XZK
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB688INC


title: snRNA-seq from left cerebral cortex (ENCLB999XEY)

description:
https://www.encodeproject.org/experiments/ENCSR883XZK/
***************
biological replicate number: 2
technical replicate number: 4
description: Illumina short-read B6/Cast F1 cortex P18-20mo male normal 12k
experiment encode accession: ENCSR883XZK
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB999XEY


title: snRNA-seq from left cerebral cortex (ENCLB064BAG)

description:
https://www.encodeproject.org/experiments/ENCSR883XZK/
***************
biological replicate number: 1
technical replicate number: 6
description: Illumina short-read B6/Cast F1 cortex P18-20mo male normal 12k
experiment encode accession: ENCSR883XZK
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB064BAG


title: snRNA-seq from layer of hippocampus (ENCLB541LEL)

description:
https://www.encodeproject.org/experiments/ENCSR869HKZ/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 hippocampus P36 female ont_match 2k
experiment encode accession: ENCSR869HKZ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB541LEL
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

value: layer of hippocampus

value: B6/Cast F1 hippocampus P36 female 2

value: female

value: 36 day

value: ENCBS317KAV at ENCODE; https://www.encodeproject.org/ENCBS317KAV/


title: snRNA-seq from heart (ENCLB727KGQ)

description:
https://www.encodeproject.org/experiments/ENCSR860LQG/
***************
biological replicate number: 2
technical replicate number: 2
description: Illumina short-read B6/Cast F1 heart P36 male normal 12k
experiment encode accession: ENCSR860LQG
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB727KGQ

source_name: Mus musculus strain B6CASTF1/J male postnatal (36 days) heart tissue nuclear fraction

value: heart

value: tissue

value: B6/Cast F1 heart P36 male 2

value: postnatal

value: ENCBS018LKO at ENCODE; https://www.encodeproject.org/ENCBS018LKO/


title: snRNA-seq from heart (ENCLB439PTN)

description:
https://www.encodeproject.org/experiments/ENCSR860LQG/
***************
biological replicate number: 1
technical replicate number: 3
description: Illumina short-read B6/Cast F1 heart P36 male normal 12k
experiment encode accession: ENCSR860LQG
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB439PTN

value: B6/Cast F1 heart P36 male 1

value: male

value: Ali Mortazavi, UCI

value: ENCBS073VUQ at ENCODE; https://www.encodeproject.org/ENCBS073VUQ/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from heart (ENCLB705MMZ)

description:
https://www.encodeproject.org/experiments/ENCSR860LQG/
***************
biological replicate number: 1
technical replicate number: 4
description: Illumina short-read B6/Cast F1 heart P36 male normal 12k
experiment encode accession: ENCSR860LQG
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB705MMZ

value: nucleus

value: The Jackson Laboratory


title: snRNA-seq from heart (ENCLB929WFY)

description:
https://www.encodeproject.org/experiments/ENCSR906KCJ/
***************
biological replicate number: 2
technical replicate number: 4
description: Illumina short-read B6/Cast F1 heart P25 female normal 12k
experiment encode accession: ENCSR906KCJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB929WFY

value: B6/Cast F1 heart P25 female 2

value: 25 day

value: ENCBS851DUN at ENCODE; https://www.encodeproject.org/ENCBS851DUN/


title: snRNA-seq from adrenal gland (ENCLB738TZN)

description:
https://www.encodeproject.org/experiments/ENCSR899EKD/
***************
biological replicate number: 1
technical replicate number: 3
description: Illumina short-read B6/Cast F1 adrenal P18-20mo female normal 12k
experiment encode accession: ENCSR899EKD
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB738TZN

value: adrenal gland

value: B6/Cast F1 adrenal P18-20mo female 1

value: female

value: adult

value: 18-20 month

value: ENCBS537RFX at ENCODE; https://www.encodeproject.org/ENCBS537RFX/


title: snRNA-seq from heart (ENCLB672AEM)

description:
https://www.encodeproject.org/experiments/ENCSR860LQG/
***************
biological replicate number: 2
technical replicate number: 3
description: Illumina short-read B6/Cast F1 heart P36 male normal 12k
experiment encode accession: ENCSR860LQG
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB672AEM

value: heart

value: tissue

value: B6/Cast F1 heart P36 male 2

value: postnatal

value: 36 day

value: ENCBS018LKO at ENCODE; https://www.encodeproject.org/ENCBS018LKO/


title: snRNA-seq from heart (ENCLB967SPX)

description:
https://www.encodeproject.org/experiments/ENCSR860LQG/
***************
biological replicate number: 1
technical replicate number: 2
description: Illumina short-read B6/Cast F1 heart P36 male normal 12k
experiment encode accession: ENCSR860LQG
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB967SPX

value: B6/Cast F1 heart P36 male 1

value: male

value: Ali Mortazavi, UCI

value: nucleus

value: ENCBS073VUQ at ENCODE; https://www.encodeproject.org/ENCBS073VUQ/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from heart (ENCLB933POW)

description:
https://www.encodeproject.org/experiments/ENCSR860LQG/
***************
biological replicate number: 2
technical replicate number: 4
description: Illumina short-read B6/Cast F1 heart P36 male normal 12k
experiment encode accession: ENCSR860LQG
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB933POW

value: The Jackson Laboratory


title: snRNA-seq from layer of hippocampus (ENCLB367HZZ)

description:
https://www.encodeproject.org/experiments/ENCSR859XOI/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 hippocampus P14 female normal 2k
experiment encode accession: ENCSR859XOI
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB367HZZ
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

source_name: Mus musculus strain B6CASTF1/J female postnatal (14 days) layer of hippocampus tissue nuclear fraction

value: layer of hippocampus

value: B6/Cast F1 hippocampus P14 female 2

value: female

value: 14 day

value: ENCBS300KQE at ENCODE; https://www.encodeproject.org/ENCBS300KQE/


title: snRNA-seq from layer of hippocampus (ENCLB604YOH)

description:
https://www.encodeproject.org/experiments/ENCSR846QIZ/
***************
biological replicate number: 1
technical replicate number: 5
description: Illumina short-read B6/Cast F1 hippocampus P10 male normal 12k
experiment encode accession: ENCSR846QIZ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB604YOH

source_name: Mus musculus strain B6CASTF1/J male postnatal (10 days) layer of hippocampus tissue nuclear fraction

value: tissue

value: B6/Cast F1 hippocampus P10 male 1

value: 10 day

value: ENCBS749DZM at ENCODE; https://www.encodeproject.org/ENCBS749DZM/


title: snRNA-seq from heart (ENCLB621EIT)

description:
https://www.encodeproject.org/experiments/ENCSR868XSG/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 heart P10 female normal 2k
experiment encode accession: ENCSR868XSG
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB621EIT
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

value: heart

value: B6/Cast F1 heart P10 female 2

value: postnatal

value: ENCBS358CLR at ENCODE; https://www.encodeproject.org/ENCBS358CLR/


title: snRNA-seq from layer of hippocampus (ENCLB875AFL)

description:
https://www.encodeproject.org/experiments/ENCSR846QIZ/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 hippocampus P10 male normal 12k
experiment encode accession: ENCSR846QIZ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB875AFL

value: B6/Cast F1 hippocampus P10 male 2

value: male

value: Ali Mortazavi, UCI

value: nucleus

value: ENCBS578PCE at ENCODE; https://www.encodeproject.org/ENCBS578PCE/


title: snRNA-seq from layer of hippocampus (ENCLB929UNM)

description:
https://www.encodeproject.org/experiments/ENCSR855URG/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 hippocampus P8mo male 8mo 2k
experiment encode accession: ENCSR855URG
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB929UNM
nucleic acid starting quantity: 125
nucleic acid starting quantity units: cells

source_name: Mus musculus strain B6CASTF1/J male adult (8 months) layer of hippocampus tissue nuclear fraction

value: layer of hippocampus

value: B6/Cast F1 hippocampus P8mo male 2

value: adult

value: 8 month

value: The Jackson Laboratory

value: ENCBS814FFV at ENCODE; https://www.encodeproject.org/ENCBS814FFV/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from layer of hippocampus (ENCLB542JEY)

description:
https://www.encodeproject.org/experiments/ENCSR846QIZ/
***************
biological replicate number: 1
technical replicate number: 2
description: Illumina short-read B6/Cast F1 hippocampus P10 male normal 12k
experiment encode accession: ENCSR846QIZ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB542JEY

value: tissue

value: B6/Cast F1 hippocampus P10 male 1

value: 10 day

value: ENCBS749DZM at ENCODE; https://www.encodeproject.org/ENCBS749DZM/


title: snRNA-seq from layer of hippocampus (ENCLB725NDG)

description:
https://www.encodeproject.org/experiments/ENCSR846QIZ/
***************
biological replicate number: 2
technical replicate number: 2
description: Illumina short-read B6/Cast F1 hippocampus P10 male normal 12k
experiment encode accession: ENCSR846QIZ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB725NDG

value: postnatal


title: snRNA-seq from layer of hippocampus (ENCLB002WZT)

description:
https://www.encodeproject.org/experiments/ENCSR846QIZ/
***************
biological replicate number: 2
technical replicate number: 5
description: Illumina short-read B6/Cast F1 hippocampus P10 male normal 12k
experiment encode accession: ENCSR846QIZ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB002WZT

value: B6/Cast F1 hippocampus P10 male 2


title: snRNA-seq from layer of hippocampus (ENCLB752OPA)

description:
https://www.encodeproject.org/experiments/ENCSR846QIZ/
***************
biological replicate number: 1
technical replicate number: 4
description: Illumina short-read B6/Cast F1 hippocampus P10 male normal 12k
experiment encode accession: ENCSR846QIZ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB752OPA

value: male


title: snRNA-seq from left cerebral cortex (ENCLB405QDU)

description:
https://www.encodeproject.org/experiments/ENCSR839BHY/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 cortex P2mo female normal 12k
experiment encode accession: ENCSR839BHY
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB405QDU

source_name: Mus musculus strain B6CASTF1/J female adult (2 months) left cerebral cortex tissue nuclear fraction

value: left cerebral cortex

value: B6/Cast F1 cortex P2mo female 2

value: female

value: 2 month

value: Ali Mortazavi, UCI

value: ENCBS174PCZ at ENCODE; https://www.encodeproject.org/ENCBS174PCZ/


title: snRNA-seq from layer of hippocampus (ENCLB800YJD)

description:
https://www.encodeproject.org/experiments/ENCSR846QIZ/
***************
biological replicate number: 1
technical replicate number: 3
description: Illumina short-read B6/Cast F1 hippocampus P10 male normal 12k
experiment encode accession: ENCSR846QIZ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB800YJD

value: layer of hippocampus

value: nucleus


title: snRNA-seq from heart (ENCLB296YAB)

description:
https://www.encodeproject.org/experiments/ENCSR860LQG/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 heart P36 male normal 12k
experiment encode accession: ENCSR860LQG
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB296YAB

value: heart

value: B6/Cast F1 heart P36 male 1

value: 36 day

value: The Jackson Laboratory

value: ENCBS073VUQ at ENCODE; https://www.encodeproject.org/ENCBS073VUQ/


title: snRNA-seq from left cerebral cortex (ENCLB121XTD)

description:
https://www.encodeproject.org/experiments/ENCSR839BHY/
***************
biological replicate number: 2
technical replicate number: 5
description: Illumina short-read B6/Cast F1 cortex P2mo female normal 12k
experiment encode accession: ENCSR839BHY
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB121XTD

value: tissue

value: adult

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from heart (ENCLB717IBA)

description:
https://www.encodeproject.org/experiments/ENCSR860LQG/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 heart P36 male normal 12k
experiment encode accession: ENCSR860LQG
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB717IBA

value: B6/Cast F1 heart P36 male 2

value: male

value: postnatal

value: ENCBS018LKO at ENCODE; https://www.encodeproject.org/ENCBS018LKO/


title: snRNA-seq from layer of hippocampus (ENCLB933ASV)

description:
https://www.encodeproject.org/experiments/ENCSR859XOI/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 hippocampus P14 female normal 2k
experiment encode accession: ENCSR859XOI
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB933ASV
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

value: B6/Cast F1 hippocampus P14 female 1

value: female

value: 14 day

value: ENCBS454DBZ at ENCODE; https://www.encodeproject.org/ENCBS454DBZ/


title: snRNA-seq from layer of hippocampus (ENCLB739RTX)

description:
https://www.encodeproject.org/experiments/ENCSR855URG/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 hippocampus P8mo male 8mo 2k
experiment encode accession: ENCSR855URG
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB739RTX
nucleic acid starting quantity: 125
nucleic acid starting quantity units: cells

value: layer of hippocampus

value: B6/Cast F1 hippocampus P8mo male 1

value: 8 month

value: Ali Mortazavi, UCI

value: nucleus

value: ENCBS988HXK at ENCODE; https://www.encodeproject.org/ENCBS988HXK/


title: snRNA-seq from left cerebral cortex (ENCLB594NUU)

description:
https://www.encodeproject.org/experiments/ENCSR839BHY/
***************
biological replicate number: 1
technical replicate number: 6
description: Illumina short-read B6/Cast F1 cortex P2mo female normal 12k
experiment encode accession: ENCSR839BHY
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB594NUU

value: left cerebral cortex

value: tissue

value: B6/Cast F1 cortex P2mo female 1

value: 2 month

value: The Jackson Laboratory

value: ENCBS043EST at ENCODE; https://www.encodeproject.org/ENCBS043EST/


title: snRNA-seq from left cerebral cortex (ENCLB246KVH)

description:
https://www.encodeproject.org/experiments/ENCSR839BHY/
***************
biological replicate number: 1
technical replicate number: 4
description: Illumina short-read B6/Cast F1 cortex P2mo female normal 12k
experiment encode accession: ENCSR839BHY
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB246KVH

value: adult

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from layer of hippocampus (ENCLB076EYY)

description:
https://www.encodeproject.org/experiments/ENCSR846QIZ/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 hippocampus P10 male normal 12k
experiment encode accession: ENCSR846QIZ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB076EYY

value: B6/Cast F1 hippocampus P10 male 1

value: male

value: postnatal

value: 10 day

value: ENCBS749DZM at ENCODE; https://www.encodeproject.org/ENCBS749DZM/


title: snRNA-seq from left cerebral cortex (ENCLB833LMV)

description:
https://www.encodeproject.org/experiments/ENCSR839BHY/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 cortex P2mo female normal 12k
experiment encode accession: ENCSR839BHY
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB833LMV

value: female


title: snRNA-seq from left cerebral cortex (ENCLB027FOK)

description:
https://www.encodeproject.org/experiments/ENCSR839BHY/
***************
biological replicate number: 2
technical replicate number: 3
description: Illumina short-read B6/Cast F1 cortex P2mo female normal 12k
experiment encode accession: ENCSR839BHY
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB027FOK

value: B6/Cast F1 cortex P2mo female 2

value: Ali Mortazavi, UCI

value: ENCBS174PCZ at ENCODE; https://www.encodeproject.org/ENCBS174PCZ/


title: snRNA-seq from layer of hippocampus (ENCLB462RMD)

description:
https://www.encodeproject.org/experiments/ENCSR846QIZ/
***************
biological replicate number: 2
technical replicate number: 3
description: Illumina short-read B6/Cast F1 hippocampus P10 male normal 12k
experiment encode accession: ENCSR846QIZ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB462RMD

value: layer of hippocampus

value: B6/Cast F1 hippocampus P10 male 2

value: nucleus

value: ENCBS578PCE at ENCODE; https://www.encodeproject.org/ENCBS578PCE/


title: snRNA-seq from layer of hippocampus (ENCLB157LSK)

description:
https://www.encodeproject.org/experiments/ENCSR846QIZ/
***************
biological replicate number: 2
technical replicate number: 4
description: Illumina short-read B6/Cast F1 hippocampus P10 male normal 12k
experiment encode accession: ENCSR846QIZ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB157LSK

value: tissue

value: The Jackson Laboratory


title: snRNA-seq from left cerebral cortex (ENCLB316HYI)

description:
https://www.encodeproject.org/experiments/ENCSR839BHY/
***************
biological replicate number: 1
technical replicate number: 2
description: Illumina short-read B6/Cast F1 cortex P2mo female normal 12k
experiment encode accession: ENCSR839BHY
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB316HYI

value: left cerebral cortex

value: B6/Cast F1 cortex P2mo female 1

value: adult

value: 2 month

value: ENCBS043EST at ENCODE; https://www.encodeproject.org/ENCBS043EST/


title: snRNA-seq from left cerebral cortex (ENCLB861LSX)

description:
https://www.encodeproject.org/experiments/ENCSR839BHY/
***************
biological replicate number: 1
technical replicate number: 3
description: Illumina short-read B6/Cast F1 cortex P2mo female normal 12k
experiment encode accession: ENCSR839BHY
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB861LSX

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from left cerebral cortex (ENCLB214RIA)

description:
https://www.encodeproject.org/experiments/ENCSR839BHY/
***************
biological replicate number: 1
technical replicate number: 5
description: Illumina short-read B6/Cast F1 cortex P2mo female normal 12k
experiment encode accession: ENCSR839BHY
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB214RIA


title: snRNA-seq from left cerebral cortex (ENCLB210PTX)

description:
https://www.encodeproject.org/experiments/ENCSR839BHY/
***************
biological replicate number: 2
technical replicate number: 2
description: Illumina short-read B6/Cast F1 cortex P2mo female normal 12k
experiment encode accession: ENCSR839BHY
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB210PTX


title: snRNA-seq from left cerebral cortex (ENCLB171AWX)

description:
https://www.encodeproject.org/experiments/ENCSR827AOS/
***************
biological replicate number: 2
technical replicate number: 5
description: Illumina short-read B6/Cast F1 cortex P10 female normal 12k
experiment encode accession: ENCSR827AOS
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB171AWX

source_name: Mus musculus strain B6CASTF1/J female postnatal (10 days) left cerebral cortex tissue nuclear fraction

value: B6/Cast F1 cortex P10 female 2

value: postnatal

value: 10 day

value: ENCBS955GMS at ENCODE; https://www.encodeproject.org/ENCBS955GMS/


title: snRNA-seq from left cerebral cortex (ENCLB821ELA)

description:
https://www.encodeproject.org/experiments/ENCSR839BHY/
***************
biological replicate number: 2
technical replicate number: 4
description: Illumina short-read B6/Cast F1 cortex P2mo female normal 12k
experiment encode accession: ENCSR839BHY
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB821ELA

value: B6/Cast F1 cortex P2mo female 2

value: female

value: Ali Mortazavi, UCI

value: ENCBS174PCZ at ENCODE; https://www.encodeproject.org/ENCBS174PCZ/


title: snRNA-seq from left cerebral cortex (ENCLB865RYC)

description:
https://www.encodeproject.org/experiments/ENCSR827AOS/
***************
biological replicate number: 1
technical replicate number: 5
description: Illumina short-read B6/Cast F1 cortex P10 female normal 12k
experiment encode accession: ENCSR827AOS
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB865RYC

value: B6/Cast F1 cortex P10 female 1

value: nucleus

value: ENCBS613XIS at ENCODE; https://www.encodeproject.org/ENCBS613XIS/


title: snRNA-seq from left cerebral cortex (ENCLB263JBB)

description:
https://www.encodeproject.org/experiments/ENCSR827AOS/
***************
biological replicate number: 1
technical replicate number: 4
description: Illumina short-read B6/Cast F1 cortex P10 female normal 12k
experiment encode accession: ENCSR827AOS
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB263JBB

value: left cerebral cortex

value: tissue

value: The Jackson Laboratory


title: snRNA-seq from left cerebral cortex (ENCLB922FJL)

description:
https://www.encodeproject.org/experiments/ENCSR827AOS/
***************
biological replicate number: 1
technical replicate number: 6
description: Illumina short-read B6/Cast F1 cortex P10 female normal 12k
experiment encode accession: ENCSR827AOS
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB922FJL


title: snRNA-seq from left cerebral cortex (ENCLB329RCA)

description:
https://www.encodeproject.org/experiments/ENCSR827AOS/
***************
biological replicate number: 1
technical replicate number: 3
description: Illumina short-read B6/Cast F1 cortex P10 female normal 12k
experiment encode accession: ENCSR827AOS
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB329RCA


title: snRNA-seq from left cerebral cortex (ENCLB761CEJ)

description:
https://www.encodeproject.org/experiments/ENCSR827AOS/
***************
biological replicate number: 2
technical replicate number: 6
description: Illumina short-read B6/Cast F1 cortex P10 female normal 12k
experiment encode accession: ENCSR827AOS
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB761CEJ


title: snRNA-seq from adrenal gland (ENCLB507NWH)

description:
https://www.encodeproject.org/experiments/ENCSR826EHD/
***************
biological replicate number: 1
technical replicate number: 4
description: Illumina short-read B6/Cast F1 adrenal P36 female normal 12k
experiment encode accession: ENCSR826EHD
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB507NWH

source_name: Mus musculus strain B6CASTF1/J female postnatal (36 days) adrenal gland tissue nuclear fraction

value: adrenal gland

value: B6/Cast F1 adrenal P36 female 1

value: 36 day

value: ENCBS291QIZ at ENCODE; https://www.encodeproject.org/ENCBS291QIZ/


title: snRNA-seq from left cerebral cortex (ENCLB593XPQ)

description:
https://www.encodeproject.org/experiments/ENCSR827AOS/
***************
biological replicate number: 1
technical replicate number: 2
description: Illumina short-read B6/Cast F1 cortex P10 female normal 12k
experiment encode accession: ENCSR827AOS
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB593XPQ

value: postnatal

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from left cerebral cortex (ENCLB467TYR)

description:
https://www.encodeproject.org/experiments/ENCSR827AOS/
***************
biological replicate number: 2
technical replicate number: 2
description: Illumina short-read B6/Cast F1 cortex P10 female normal 12k
experiment encode accession: ENCSR827AOS
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB467TYR

value: B6/Cast F1 cortex P10 female 2

value: 10 day

value: ENCBS955GMS at ENCODE; https://www.encodeproject.org/ENCBS955GMS/


title: snRNA-seq from left cerebral cortex (ENCLB177IBU)

description:
https://www.encodeproject.org/experiments/ENCSR827AOS/
***************
biological replicate number: 2
technical replicate number: 4
description: Illumina short-read B6/Cast F1 cortex P10 female normal 12k
experiment encode accession: ENCSR827AOS
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB177IBU

value: female

value: Ali Mortazavi, UCI


title: snRNA-seq from left cerebral cortex (ENCLB133YOM)

description:
https://www.encodeproject.org/experiments/ENCSR827AOS/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 cortex P10 female normal 12k
experiment encode accession: ENCSR827AOS
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB133YOM

value: B6/Cast F1 cortex P10 female 1


title: snRNA-seq from left cerebral cortex (ENCLB990OKU)

description:
https://www.encodeproject.org/experiments/ENCSR839BHY/
***************
biological replicate number: 2
technical replicate number: 6
description: Illumina short-read B6/Cast F1 cortex P2mo female normal 12k
experiment encode accession: ENCSR839BHY
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB990OKU

value: B6/Cast F1 cortex P2mo female 2

value: adult

value: 2 month

value: nucleus

value: ENCBS174PCZ at ENCODE; https://www.encodeproject.org/ENCBS174PCZ/


title: snRNA-seq from adrenal gland (ENCLB053UIV)

description:
https://www.encodeproject.org/experiments/ENCSR826EHD/
***************
biological replicate number: 1
technical replicate number: 5
description: Illumina short-read B6/Cast F1 adrenal P36 female normal 12k
experiment encode accession: ENCSR826EHD
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB053UIV

value: adrenal gland

value: tissue

value: The Jackson Laboratory


title: snRNA-seq from left cerebral cortex (ENCLB154DTV)

description:
https://www.encodeproject.org/experiments/ENCSR827AOS/
***************
biological replicate number: 2
technical replicate number: 3
description: Illumina short-read B6/Cast F1 cortex P10 female normal 12k
experiment encode accession: ENCSR827AOS
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB154DTV

value: left cerebral cortex


title: snRNA-seq from adrenal gland (ENCLB812KFX)

description:
https://www.encodeproject.org/experiments/ENCSR826EHD/
***************
biological replicate number: 2
technical replicate number: 3
description: Illumina short-read B6/Cast F1 adrenal P36 female normal 12k
experiment encode accession: ENCSR826EHD
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB812KFX

value: B6/Cast F1 adrenal P36 female 2

value: postnatal

value: 36 day

value: ENCBS231UDN at ENCODE; https://www.encodeproject.org/ENCBS231UDN/


title: snRNA-seq from adrenal gland (ENCLB116VXR)

description:
https://www.encodeproject.org/experiments/ENCSR826EHD/
***************
biological replicate number: 2
technical replicate number: 2
description: Illumina short-read B6/Cast F1 adrenal P36 female normal 12k
experiment encode accession: ENCSR826EHD
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB116VXR

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from adrenal gland (ENCLB679SBN)

description:
https://www.encodeproject.org/experiments/ENCSR826EHD/
***************
biological replicate number: 1
technical replicate number: 6
description: Illumina short-read B6/Cast F1 adrenal P36 female normal 12k
experiment encode accession: ENCSR826EHD
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB679SBN

value: B6/Cast F1 adrenal P36 female 1

value: female

value: ENCBS291QIZ at ENCODE; https://www.encodeproject.org/ENCBS291QIZ/


title: snRNA-seq from adrenal gland (ENCLB769QHP)

description:
https://www.encodeproject.org/experiments/ENCSR826EHD/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 adrenal P36 female normal 12k
experiment encode accession: ENCSR826EHD
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB769QHP

value: Ali Mortazavi, UCI


title: snRNA-seq from adrenal gland (ENCLB090BPN)

description:
https://www.encodeproject.org/experiments/ENCSR826EHD/
***************
biological replicate number: 1
technical replicate number: 3
description: Illumina short-read B6/Cast F1 adrenal P36 female normal 12k
experiment encode accession: ENCSR826EHD
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB090BPN


title: snRNA-seq from adrenal gland (ENCLB924BDS)

description:
https://www.encodeproject.org/experiments/ENCSR826EHD/
***************
biological replicate number: 2
technical replicate number: 5
description: Illumina short-read B6/Cast F1 adrenal P36 female normal 12k
experiment encode accession: ENCSR826EHD
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB924BDS


title: snRNA-seq from adrenal gland (ENCLB137VPK)

description:
https://www.encodeproject.org/experiments/ENCSR826EHD/
***************
biological replicate number: 1
technical replicate number: 2
description: Illumina short-read B6/Cast F1 adrenal P36 female normal 12k
experiment encode accession: ENCSR826EHD
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB137VPK


title: snRNA-seq from layer of hippocampus (ENCLB242YJU)

description:
https://www.encodeproject.org/experiments/ENCSR824CFI/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 hippocampus P2mo female normal 2k
experiment encode accession: ENCSR824CFI
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB242YJU
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

source_name: Mus musculus strain B6CASTF1/J female adult (2 months) layer of hippocampus tissue nuclear fraction

value: layer of hippocampus

value: B6/Cast F1 hippocampus P2mo female 2

value: adult

value: ENCBS772CYI at ENCODE; https://www.encodeproject.org/ENCBS772CYI/


title: snRNA-seq from adrenal gland (ENCLB303OOK)

description:
https://www.encodeproject.org/experiments/ENCSR826EHD/
***************
biological replicate number: 2
technical replicate number: 4
description: Illumina short-read B6/Cast F1 adrenal P36 female normal 12k
experiment encode accession: ENCSR826EHD
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB303OOK

value: adrenal gland

value: nucleus


title: snRNA-seq from layer of hippocampus (ENCLB297DPA)

description:
https://www.encodeproject.org/experiments/ENCSR824CFI/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 hippocampus P2mo female normal 2k
experiment encode accession: ENCSR824CFI
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB297DPA
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

value: tissue

value: B6/Cast F1 hippocampus P2mo female 1

value: 2 month

value: The Jackson Laboratory

value: ENCBS554AFJ at ENCODE; https://www.encodeproject.org/ENCBS554AFJ/


title: snRNA-seq from adrenal gland (ENCLB265BSE)

description:
https://www.encodeproject.org/experiments/ENCSR826EHD/
***************
biological replicate number: 2
technical replicate number: 6
description: Illumina short-read B6/Cast F1 adrenal P36 female normal 12k
experiment encode accession: ENCSR826EHD
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB265BSE

value: B6/Cast F1 adrenal P36 female 2

value: postnatal

value: 36 day

value: ENCBS231UDN at ENCODE; https://www.encodeproject.org/ENCBS231UDN/


title: snRNA-seq from left cerebral cortex (ENCLB841NAH)

description:
https://www.encodeproject.org/experiments/ENCSR827AOS/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 cortex P10 female normal 12k
experiment encode accession: ENCSR827AOS
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB841NAH

value: left cerebral cortex

value: B6/Cast F1 cortex P10 female 2

value: female

value: 10 day

value: ENCBS955GMS at ENCODE; https://www.encodeproject.org/ENCBS955GMS/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from left cerebral cortex (ENCLB729NLM)

description:
https://www.encodeproject.org/experiments/ENCSR823HRL/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read 5xFAD/Cast F1 cortex P8mo male 8mo 12k
experiment encode accession: ENCSR823HRL
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB729NLM

source_name: Mus musculus strain 5xFAD/CAST male adult (8 months) left cerebral cortex tissue nuclear fraction

value: 5xFAD/Cast F1 cortex P8mo male 1

value: male

value: adult

value: 8 month

value: Ali Mortazavi, UCI

value: ENCBS648JXV at ENCODE; https://www.encodeproject.org/ENCBS648JXV/

value: Derived from ENCODE donor ENCDO996MUL; https://www.encodeproject.org/ENCDO996MUL/


title: snRNA-seq from left cerebral cortex (ENCLB741XNC)

description:
https://www.encodeproject.org/experiments/ENCSR823HRL/
***************
biological replicate number: 1
technical replicate number: 3
description: Illumina short-read 5xFAD/Cast F1 cortex P8mo male 8mo 12k
experiment encode accession: ENCSR823HRL
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB741XNC

value: tissue

value: nucleus

value: The Jackson Laboratory


title: snRNA-seq from left cerebral cortex (ENCLB950ZEM)

description:
https://www.encodeproject.org/experiments/ENCSR823HRL/
***************
biological replicate number: 1
technical replicate number: 2
description: Illumina short-read 5xFAD/Cast F1 cortex P8mo male 8mo 12k
experiment encode accession: ENCSR823HRL
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB950ZEM


title: snRNA-seq from left cerebral cortex (ENCLB866IFO)

description:
https://www.encodeproject.org/experiments/ENCSR823HRL/
***************
biological replicate number: 1
technical replicate number: 4
description: Illumina short-read 5xFAD/Cast F1 cortex P8mo male 8mo 12k
experiment encode accession: ENCSR823HRL
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB866IFO


title: snRNA-seq from left cerebral cortex (ENCLB357DID)

description:
https://www.encodeproject.org/experiments/ENCSR823HRL/
***************
biological replicate number: 2
technical replicate number: 2
description: Illumina short-read 5xFAD/Cast F1 cortex P8mo male 8mo 12k
experiment encode accession: ENCSR823HRL
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB357DID

value: 5xFAD/Cast F1 cortex P8mo male 2

value: ENCBS614XKF at ENCODE; https://www.encodeproject.org/ENCBS614XKF/


title: snRNA-seq from left cerebral cortex (ENCLB837FHG)

description:
https://www.encodeproject.org/experiments/ENCSR823HRL/
***************
biological replicate number: 2
technical replicate number: 5
description: Illumina short-read 5xFAD/Cast F1 cortex P8mo male 8mo 12k
experiment encode accession: ENCSR823HRL
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB837FHG

value: left cerebral cortex


title: snRNA-seq from left cerebral cortex (ENCLB145QHX)

description:
https://www.encodeproject.org/experiments/ENCSR823HRL/
***************
biological replicate number: 1
technical replicate number: 6
description: Illumina short-read 5xFAD/Cast F1 cortex P8mo male 8mo 12k
experiment encode accession: ENCSR823HRL
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB145QHX


title: snRNA-seq from left cerebral cortex (ENCLB941AYQ)

description:
https://www.encodeproject.org/experiments/ENCSR823HRL/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read 5xFAD/Cast F1 cortex P8mo male 8mo 12k
experiment encode accession: ENCSR823HRL
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB941AYQ


title: snRNA-seq from left cerebral cortex (ENCLB214PNO)

description:
https://www.encodeproject.org/experiments/ENCSR823HRL/
***************
biological replicate number: 2
technical replicate number: 4
description: Illumina short-read 5xFAD/Cast F1 cortex P8mo male 8mo 12k
experiment encode accession: ENCSR823HRL
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB214PNO


title: snRNA-seq from left cerebral cortex (ENCLB437GQI)

description:
https://www.encodeproject.org/experiments/ENCSR823HRL/
***************
biological replicate number: 1
technical replicate number: 5
description: Illumina short-read 5xFAD/Cast F1 cortex P8mo male 8mo 12k
experiment encode accession: ENCSR823HRL
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB437GQI


title: snRNA-seq from adrenal gland (ENCLB126YTW)

description:
https://www.encodeproject.org/experiments/ENCSR826EHD/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 adrenal P36 female normal 12k
experiment encode accession: ENCSR826EHD
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB126YTW

value: adrenal gland

value: B6/Cast F1 adrenal P36 female 1

value: female

value: postnatal

value: 36 day

value: ENCBS291QIZ at ENCODE; https://www.encodeproject.org/ENCBS291QIZ/


title: snRNA-seq from left cerebral cortex (ENCLB734WOZ)

description:
https://www.encodeproject.org/experiments/ENCSR823HRL/
***************
biological replicate number: 2
technical replicate number: 6
description: Illumina short-read 5xFAD/Cast F1 cortex P8mo male 8mo 12k
experiment encode accession: ENCSR823HRL
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB734WOZ

value: male

value: adult