title: DNase-seq from nucleus accumbens (ENCLB787WDK)

description:
https://www.encodeproject.org/experiments/ENCSR794LDL/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR794LDL
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB787WDK

value: nucleus accumbens

value: adult

value: unknown

value: John Stamatoyannopoulos, UW

value: ENCBS056DIO at ENCODE; https://www.encodeproject.org/ENCBS056DIO/


title: DNase-seq from C1 segment of cervical spinal cord (ENCLB449WBQ)

status: Public on Mar 06 2026

type: SRA

city: Stanford

first: ENCODE

last: DCC

state: CA

address: 300 Pasteur Dr

country: USA

institute: ENCODE DCC

description:
https://www.encodeproject.org/experiments/ENCSR794KHT/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR794KHT
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB449WBQ

library_source: genomic

data_processing: See GSM*_README.txt supplementary file linked below

molecule: genomic DNA

organism: Homo sapiens

source_name: Homo sapiens female adult C1 segment of cervical spinal cord tissue

value: C1 segment of cervical spinal cord

value: tissue

tag: biosample encode accession

tag: encode accession

tag: Sex

value: female

tag: dev stage

tag: age

tag: lab

tag: source

value: Kristin Ardlie

tag: link

value: ENCBS311SWE at ENCODE; https://www.encodeproject.org/ENCBS311SWE/


title: DNase-seq from Ammon's horn (ENCLB338QUB)

description:
https://www.encodeproject.org/experiments/ENCSR799FDC/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR799FDC
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB338QUB

source_name: Homo sapiens female adult Ammon's horn tissue

value: Ammon's horn

value: ENCBS969PEJ at ENCODE; https://www.encodeproject.org/ENCBS969PEJ/


title: snRNA-seq from left cerebral cortex (ENCLB984ILH)

description:
https://www.encodeproject.org/experiments/ENCSR081SXM/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 cortex P14 female normal 2k
experiment encode accession: ENCSR081SXM
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB984ILH
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

library_source: transcriptomic

molecule: total RNA

organism: Mus musculus

source_name: Mus musculus strain B6CASTF1/J female postnatal (14 days) left cerebral cortex tissue nuclear fraction

value: left cerebral cortex

tag: description

value: B6/Cast F1 cortex P14 female 2

value: postnatal

value: 14 day

value: Ali Mortazavi, UCI

tag: subcellular fraction term name

value: nucleus

value: The Jackson Laboratory

value: ENCBS837RGL at ENCODE; https://www.encodeproject.org/ENCBS837RGL/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from layer of hippocampus (ENCLB408LWA)

description:
https://www.encodeproject.org/experiments/ENCSR079GGS/
***************
biological replicate number: 2
technical replicate number: 5
description: Illumina short-read B6/Cast F1 hippocampus P10 female normal 12k
experiment encode accession: ENCSR079GGS
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB408LWA

source_name: Mus musculus strain B6CASTF1/J female postnatal (10 days) layer of hippocampus tissue nuclear fraction

value: layer of hippocampus

value: B6/Cast F1 hippocampus P10 female 2

value: 10 day

value: ENCBS600VDJ at ENCODE; https://www.encodeproject.org/ENCBS600VDJ/


title: DNase-seq from putamen (ENCLB188XOI)

description:
https://www.encodeproject.org/experiments/ENCSR801KMJ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR801KMJ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB188XOI

source_name: Homo sapiens female adult putamen tissue

value: putamen

value: tissue

value: female

value: adult

value: unknown

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS921ZZV at ENCODE; https://www.encodeproject.org/ENCBS921ZZV/


title: DNase-seq from cerebellum (ENCLB567ONA)

description:
https://www.encodeproject.org/experiments/ENCSR800ZMK/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR800ZMK
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB567ONA

source_name: Homo sapiens male adult cerebellum tissue

value: cerebellum

value: male

value: ENCBS800OKA at ENCODE; https://www.encodeproject.org/ENCBS800OKA/


title: snRNA-seq from layer of hippocampus (ENCLB609EYL)

description:
https://www.encodeproject.org/experiments/ENCSR079GGS/
***************
biological replicate number: 2
technical replicate number: 4
description: Illumina short-read B6/Cast F1 hippocampus P10 female normal 12k
experiment encode accession: ENCSR079GGS
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB609EYL

value: postnatal

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory


title: DNase-seq from cerebellum (ENCLB599FRH)

description:
https://www.encodeproject.org/experiments/ENCSR789TWI/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR789TWI
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB599FRH

source_name: Homo sapiens female adult cerebellum tissue

value: ENCBS844GTR at ENCODE; https://www.encodeproject.org/ENCBS844GTR/


title: snRNA-seq from layer of hippocampus (ENCLB081SUD)

description:
https://www.encodeproject.org/experiments/ENCSR079CKL/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 hippocampus P18-20mo male normal 2k
experiment encode accession: ENCSR079CKL
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB081SUD
nucleic acid starting quantity: 167
nucleic acid starting quantity units: cells

source_name: Mus musculus strain B6CASTF1/J male adult (18-20 months) layer of hippocampus tissue nuclear fraction

value: layer of hippocampus

value: B6/Cast F1 hippocampus P18-20mo male 1

value: 18-20 month

value: ENCBS448REP at ENCODE; https://www.encodeproject.org/ENCBS448REP/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: DNase-seq from cerebellum (ENCLB818ZKC)

description:
https://www.encodeproject.org/experiments/ENCSR789TWI/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR789TWI
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB818ZKC

value: tissue

value: female

value: adult

value: unknown

value: ENCBS041KUP at ENCODE; https://www.encodeproject.org/ENCBS041KUP/


title: snRNA-seq from layer of hippocampus (ENCLB514RLH)

description:
https://www.encodeproject.org/experiments/ENCSR079CKL/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 hippocampus P18-20mo male normal 2k
experiment encode accession: ENCSR079CKL
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB514RLH
nucleic acid starting quantity: 167
nucleic acid starting quantity units: cells

value: B6/Cast F1 hippocampus P18-20mo male 2

value: male

value: ENCBS414FUV at ENCODE; https://www.encodeproject.org/ENCBS414FUV/


title: DNase-seq from cerebellum (ENCLB555YTF)

description:
https://www.encodeproject.org/experiments/ENCSR789QJY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR789QJY
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB555YTF

value: cerebellum

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS313YXA at ENCODE; https://www.encodeproject.org/ENCBS313YXA/


title: snRNA-seq from adrenal gland (ENCLB143KVC)

description:
https://www.encodeproject.org/experiments/ENCSR049KDI/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 adrenal P10 female normal 2k
experiment encode accession: ENCSR049KDI
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB143KVC
nucleic acid starting quantity: 42
nucleic acid starting quantity units: cells

source_name: Mus musculus strain B6CASTF1/J female postnatal (10 days) adrenal gland tissue nuclear fraction

value: adrenal gland

value: B6/Cast F1 adrenal P10 female 1

value: postnatal

value: 10 day

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory

value: ENCBS789TOM at ENCODE; https://www.encodeproject.org/ENCBS789TOM/


title: DNase-seq from putamen (ENCLB353MOE)

description:
https://www.encodeproject.org/experiments/ENCSR789MCM/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR789MCM
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB353MOE

source_name: Homo sapiens male adult putamen tissue

value: putamen

value: tissue

value: adult

value: unknown

value: ENCBS414TBV at ENCODE; https://www.encodeproject.org/ENCBS414TBV/


title: snRNA-seq from gastrocnemius (ENCLB132IFV)

description:
https://www.encodeproject.org/experiments/ENCSR047KXM/
***************
biological replicate number: 1
technical replicate number: 2
description: Illumina short-read B6/Cast F1 gastrocnemius P2mo male normal 12k
experiment encode accession: ENCSR047KXM
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB132IFV

source_name: Mus musculus strain B6CASTF1/J male adult (2 months) gastrocnemius tissue nuclear fraction

value: gastrocnemius

value: B6/Cast F1 gastrocnemius P2mo male 1

value: male

value: 2 month

value: ENCBS884VMI at ENCODE; https://www.encodeproject.org/ENCBS884VMI/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from gastrocnemius (ENCLB708SED)

description:
https://www.encodeproject.org/experiments/ENCSR047KXM/
***************
biological replicate number: 1
technical replicate number: 4
description: Illumina short-read B6/Cast F1 gastrocnemius P2mo male normal 12k
experiment encode accession: ENCSR047KXM
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB708SED


title: DNase-seq from cerebellum (ENCLB794VOP)

description:
https://www.encodeproject.org/experiments/ENCSR788HVV/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR788HVV
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB794VOP

value: cerebellum

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS333QVO at ENCODE; https://www.encodeproject.org/ENCBS333QVO/


title: DNase-seq from cerebellum (ENCLB659YDK)

description:
https://www.encodeproject.org/experiments/ENCSR787VSW/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR787VSW
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB659YDK

value: female

value: ENCBS664KHD at ENCODE; https://www.encodeproject.org/ENCBS664KHD/


title: snRNA-seq from gastrocnemius (ENCLB377YWJ)

description:
https://www.encodeproject.org/experiments/ENCSR047KXM/
***************
biological replicate number: 1
technical replicate number: 5
description: Illumina short-read B6/Cast F1 gastrocnemius P2mo male normal 12k
experiment encode accession: ENCSR047KXM
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB377YWJ

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory


title: DNase-seq from caudate nucleus (ENCLB860DOS)

description:
https://www.encodeproject.org/experiments/ENCSR785YUC/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR785YUC
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB860DOS

source_name: Homo sapiens female adult caudate nucleus tissue

value: caudate nucleus

value: tissue

value: adult

value: unknown

value: ENCBS764TZN at ENCODE; https://www.encodeproject.org/ENCBS764TZN/


title: snRNA-seq from gastrocnemius (ENCLB086CAA)

description:
https://www.encodeproject.org/experiments/ENCSR047KXM/
***************
biological replicate number: 1
technical replicate number: 3
description: Illumina short-read B6/Cast F1 gastrocnemius P2mo male normal 12k
experiment encode accession: ENCSR047KXM
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB086CAA

value: gastrocnemius

value: B6/Cast F1 gastrocnemius P2mo male 1

value: male

value: 2 month


title: DNase-seq from substantia nigra (ENCLB684GYB)

description:
https://www.encodeproject.org/experiments/ENCSR785IDX/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR785IDX
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB684GYB

source_name: Homo sapiens male adult substantia nigra tissue

value: substantia nigra

value: John Stamatoyannopoulos, UW

value: ENCBS724ZOS at ENCODE; https://www.encodeproject.org/ENCBS724ZOS/


title: snRNA-seq from gastrocnemius (ENCLB844JKS)

description:
https://www.encodeproject.org/experiments/ENCSR047KXM/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 gastrocnemius P2mo male normal 12k
experiment encode accession: ENCSR047KXM
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB844JKS

value: B6/Cast F1 gastrocnemius P2mo male 2

value: ENCBS471TDE at ENCODE; https://www.encodeproject.org/ENCBS471TDE/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: DNase-seq from substantia nigra (ENCLB463APY)

description:
https://www.encodeproject.org/experiments/ENCSR785IDX/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR785IDX
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB463APY

value: Kristin Ardlie

value: ENCBS031XER at ENCODE; https://www.encodeproject.org/ENCBS031XER/


title: DNase-seq from amygdala (ENCLB261HAZ)

description:
https://www.encodeproject.org/experiments/ENCSR784ONO/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR784ONO
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB261HAZ

source_name: Homo sapiens male adult amygdala tissue

value: amygdala

value: ENCBS200DEA at ENCODE; https://www.encodeproject.org/ENCBS200DEA/


title: snRNA-seq from adrenal gland (ENCLB731QGM)

description:
https://www.encodeproject.org/experiments/ENCSR049KDI/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 adrenal P10 female normal 2k
experiment encode accession: ENCSR049KDI
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB731QGM
nucleic acid starting quantity: 42
nucleic acid starting quantity units: cells

value: adrenal gland

value: tissue

value: B6/Cast F1 adrenal P10 female 2

value: female

value: postnatal

value: 10 day

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory

value: ENCBS204TIR at ENCODE; https://www.encodeproject.org/ENCBS204TIR/


title: snRNA-seq from gastrocnemius (ENCLB618THJ)

description:
https://www.encodeproject.org/experiments/ENCSR047KXM/
***************
biological replicate number: 2
technical replicate number: 2
description: Illumina short-read B6/Cast F1 gastrocnemius P2mo male normal 12k
experiment encode accession: ENCSR047KXM
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB618THJ

value: gastrocnemius

value: B6/Cast F1 gastrocnemius P2mo male 2

value: male

value: adult

value: 2 month


title: snRNA-seq from gastrocnemius (ENCLB929GFJ)

description:
https://www.encodeproject.org/experiments/ENCSR047KXM/
***************
biological replicate number: 2
technical replicate number: 5
description: Illumina short-read B6/Cast F1 gastrocnemius P2mo male normal 12k
experiment encode accession: ENCSR047KXM
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB929GFJ

value: ENCBS471TDE at ENCODE; https://www.encodeproject.org/ENCBS471TDE/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: DNase-seq from cerebellum (ENCLB768TJF)

description:
https://www.encodeproject.org/experiments/ENCSR773YKD/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR773YKD
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB768TJF

value: cerebellum

value: unknown

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS369QHZ at ENCODE; https://www.encodeproject.org/ENCBS369QHZ/


title: snRNA-seq from gastrocnemius (ENCLB401IVX)

description:
https://www.encodeproject.org/experiments/ENCSR047KXM/
***************
biological replicate number: 2
technical replicate number: 3
description: Illumina short-read B6/Cast F1 gastrocnemius P2mo male normal 12k
experiment encode accession: ENCSR047KXM
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB401IVX

value: tissue


title: DNase-seq from cerebellum (ENCLB805MMM)

description:
https://www.encodeproject.org/experiments/ENCSR772IVY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR772IVY
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB805MMM

value: ENCBS837GOY at ENCODE; https://www.encodeproject.org/ENCBS837GOY/


title: DNase-seq from cerebellum (ENCLB610EGH)

description:
https://www.encodeproject.org/experiments/ENCSR772IVY/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR772IVY
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB610EGH

value: ENCBS163VRV at ENCODE; https://www.encodeproject.org/ENCBS163VRV/


title: snRNA-seq from gastrocnemius (ENCLB030GSV)

description:
https://www.encodeproject.org/experiments/ENCSR047KXM/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 gastrocnemius P2mo male normal 12k
experiment encode accession: ENCSR047KXM
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB030GSV

value: B6/Cast F1 gastrocnemius P2mo male 1

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory

value: ENCBS884VMI at ENCODE; https://www.encodeproject.org/ENCBS884VMI/


title: snRNA-seq from gastrocnemius (ENCLB370VUD)

description:
https://www.encodeproject.org/experiments/ENCSR047KXM/
***************
biological replicate number: 2
technical replicate number: 4
description: Illumina short-read B6/Cast F1 gastrocnemius P2mo male normal 12k
experiment encode accession: ENCSR047KXM
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB370VUD

value: gastrocnemius

value: B6/Cast F1 gastrocnemius P2mo male 2

value: male

value: adult


title: DNase-seq from nucleus accumbens (ENCLB897YWG)

description:
https://www.encodeproject.org/experiments/ENCSR772CNQ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR772CNQ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB897YWG

source_name: Homo sapiens male adult nucleus accumbens tissue

value: nucleus accumbens

value: ENCBS808QAM at ENCODE; https://www.encodeproject.org/ENCBS808QAM/


title: DNase-seq from anterior cingulate cortex (ENCLB708OKK)

description:
https://www.encodeproject.org/experiments/ENCSR770JXK/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR770JXK
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB708OKK

source_name: Homo sapiens male adult anterior cingulate cortex tissue

value: anterior cingulate cortex

value: unknown

value: John Stamatoyannopoulos, UW

value: ENCBS825CQR at ENCODE; https://www.encodeproject.org/ENCBS825CQR/


title: DNase-seq from nucleus accumbens (ENCLB448LSO)

description:
https://www.encodeproject.org/experiments/ENCSR767XFW/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR767XFW
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB448LSO

value: tissue

value: Kristin Ardlie

value: ENCBS348OYE at ENCODE; https://www.encodeproject.org/ENCBS348OYE/


title: DNase-seq from cerebellum (ENCLB008BFI)

description:
https://www.encodeproject.org/experiments/ENCSR769IWY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR769IWY
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB008BFI

value: cerebellum

value: female

value: ENCBS868TFN at ENCODE; https://www.encodeproject.org/ENCBS868TFN/


title: snRNA-seq from heart (ENCLB758KEY)

description:
https://www.encodeproject.org/experiments/ENCSR041KFB/
***************
biological replicate number: 2
technical replicate number: 2
description: Illumina short-read B6/Cast F1 heart P14 male normal 12k
experiment encode accession: ENCSR041KFB
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB758KEY

source_name: Mus musculus strain B6CASTF1/J male postnatal (14 days) heart tissue nuclear fraction

value: heart

value: B6/Cast F1 heart P14 male 2

value: postnatal

value: 14 day

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory

value: ENCBS135NXY at ENCODE; https://www.encodeproject.org/ENCBS135NXY/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from heart (ENCLB391LRK)

description:
https://www.encodeproject.org/experiments/ENCSR041KFB/
***************
biological replicate number: 1
technical replicate number: 3
description: Illumina short-read B6/Cast F1 heart P14 male normal 12k
experiment encode accession: ENCSR041KFB
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB391LRK

value: B6/Cast F1 heart P14 male 1

value: male

value: ENCBS811EFW at ENCODE; https://www.encodeproject.org/ENCBS811EFW/


title: DNase-seq from anterior cingulate cortex (ENCLB405IHQ)

description:
https://www.encodeproject.org/experiments/ENCSR770JXK/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR770JXK
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB405IHQ

value: anterior cingulate cortex

value: tissue

value: adult

value: unknown

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS536HXU at ENCODE; https://www.encodeproject.org/ENCBS536HXU/


title: snRNA-seq from heart (ENCLB017OAQ)

description:
https://www.encodeproject.org/experiments/ENCSR041KFB/
***************
biological replicate number: 1
technical replicate number: 4
description: Illumina short-read B6/Cast F1 heart P14 male normal 12k
experiment encode accession: ENCSR041KFB
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB017OAQ

value: heart

value: postnatal


title: DNase-seq from hypothalamus (ENCLB648JPJ)

description:
https://www.encodeproject.org/experiments/ENCSR779MNG/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR779MNG
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB648JPJ

source_name: Homo sapiens female adult hypothalamus tissue

value: hypothalamus

value: female

value: ENCBS542PDZ at ENCODE; https://www.encodeproject.org/ENCBS542PDZ/


title: snRNA-seq from heart (ENCLB643OAR)

description:
https://www.encodeproject.org/experiments/ENCSR041KFB/
***************
biological replicate number: 2
technical replicate number: 3
description: Illumina short-read B6/Cast F1 heart P14 male normal 12k
experiment encode accession: ENCSR041KFB
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB643OAR

value: B6/Cast F1 heart P14 male 2

value: 14 day

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory

value: ENCBS135NXY at ENCODE; https://www.encodeproject.org/ENCBS135NXY/


title: DNase-seq from caudate nucleus (ENCLB641CFO)

description:
https://www.encodeproject.org/experiments/ENCSR766HHX/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR766HHX
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB641CFO

value: caudate nucleus

value: tissue

value: ENCBS760FBD at ENCODE; https://www.encodeproject.org/ENCBS760FBD/


title: DNase-seq from dorsolateral prefrontal cortex (ENCLB415LVE)

description:
https://www.encodeproject.org/experiments/ENCSR764HAG/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR764HAG
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB415LVE

source_name: Homo sapiens male adult dorsolateral prefrontal cortex tissue

value: dorsolateral prefrontal cortex

value: male

value: adult

value: unknown

value: John Stamatoyannopoulos, UW

value: ENCBS524YWE at ENCODE; https://www.encodeproject.org/ENCBS524YWE/


title: snRNA-seq from left cerebral cortex (ENCLB557LYD)

description:
https://www.encodeproject.org/experiments/ENCSR037LFG/
***************
biological replicate number: 2
technical replicate number: 3
description: Illumina short-read B6/Cast F1 cortex P4 male normal 12k
experiment encode accession: ENCSR037LFG
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB557LYD

source_name: Mus musculus strain B6CASTF1/J male postnatal (4 days) left cerebral cortex tissue nuclear fraction

value: left cerebral cortex

value: B6/Cast F1 cortex P4 male 2

value: postnatal

value: 4 day

value: ENCBS546HYE at ENCODE; https://www.encodeproject.org/ENCBS546HYE/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: DNase-seq from dorsolateral prefrontal cortex (ENCLB901UYX)

description:
https://www.encodeproject.org/experiments/ENCSR764HAG/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR764HAG
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB901UYX

value: Kristin Ardlie

value: ENCBS025GEL at ENCODE; https://www.encodeproject.org/ENCBS025GEL/


title: DNase-seq from Ammon's horn (ENCLB546FFV)

description:
https://www.encodeproject.org/experiments/ENCSR761JIJ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR761JIJ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB546FFV

source_name: Homo sapiens male adult Ammon's horn tissue

value: Ammon's horn

value: ENCBS757GGW at ENCODE; https://www.encodeproject.org/ENCBS757GGW/


title: snRNA-seq from heart (ENCLB355JWJ)

description:
https://www.encodeproject.org/experiments/ENCSR041KFB/
***************
biological replicate number: 1
technical replicate number: 2
description: Illumina short-read B6/Cast F1 heart P14 male normal 12k
experiment encode accession: ENCSR041KFB
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB355JWJ

value: heart

value: tissue

value: B6/Cast F1 heart P14 male 1

value: 14 day

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory

value: ENCBS811EFW at ENCODE; https://www.encodeproject.org/ENCBS811EFW/


title: snRNA-seq from left cerebral cortex (ENCLB491VUF)

description:
https://www.encodeproject.org/experiments/ENCSR037LFG/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 cortex P4 male normal 12k
experiment encode accession: ENCSR037LFG
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB491VUF

value: left cerebral cortex

value: B6/Cast F1 cortex P4 male 2

value: male


title: DNase-seq from Ammon's horn (ENCLB897HWI)

description:
https://www.encodeproject.org/experiments/ENCSR764ELW/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR764ELW
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB897HWI

source_name: Homo sapiens female adult Ammon's horn tissue

value: female

value: adult

value: unknown

value: John Stamatoyannopoulos, UW

value: ENCBS116BPY at ENCODE; https://www.encodeproject.org/ENCBS116BPY/


title: snRNA-seq from left cerebral cortex (ENCLB798ZQX)

description:
https://www.encodeproject.org/experiments/ENCSR037LFG/
***************
biological replicate number: 2
technical replicate number: 6
description: Illumina short-read B6/Cast F1 cortex P4 male normal 12k
experiment encode accession: ENCSR037LFG
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB798ZQX

value: postnatal

value: 4 day

value: ENCBS546HYE at ENCODE; https://www.encodeproject.org/ENCBS546HYE/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from left cerebral cortex (ENCLB009QYX)

description:
https://www.encodeproject.org/experiments/ENCSR037LFG/
***************
biological replicate number: 2
technical replicate number: 5
description: Illumina short-read B6/Cast F1 cortex P4 male normal 12k
experiment encode accession: ENCSR037LFG
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB009QYX

value: tissue


title: DNase-seq from putamen (ENCLB967KCA)

description:
https://www.encodeproject.org/experiments/ENCSR756MTS/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR756MTS
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-30
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB967KCA

value: putamen

value: Kristin Ardlie

value: ENCBS748NNN at ENCODE; https://www.encodeproject.org/ENCBS748NNN/


title: snRNA-seq from left cerebral cortex (ENCLB557ZUK)

description:
https://www.encodeproject.org/experiments/ENCSR037LFG/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 cortex P4 male normal 12k
experiment encode accession: ENCSR037LFG
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB557ZUK

value: B6/Cast F1 cortex P4 male 1

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory

value: ENCBS091LPB at ENCODE; https://www.encodeproject.org/ENCBS091LPB/


title: snRNA-seq from heart (ENCLB618NFA)

description:
https://www.encodeproject.org/experiments/ENCSR041KFB/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 heart P14 male normal 12k
experiment encode accession: ENCSR041KFB
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB618NFA

value: heart

value: B6/Cast F1 heart P14 male 1

value: male

value: 14 day

value: ENCBS811EFW at ENCODE; https://www.encodeproject.org/ENCBS811EFW/


title: DNase-seq from putamen (ENCLB658DSX)

description:
https://www.encodeproject.org/experiments/ENCSR755TFJ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR755TFJ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB658DSX

value: adult

value: unknown

value: John Stamatoyannopoulos, UW

value: ENCBS277DAX at ENCODE; https://www.encodeproject.org/ENCBS277DAX/


title: snRNA-seq from left cerebral cortex (ENCLB139WTN)

description:
https://www.encodeproject.org/experiments/ENCSR037LFG/
***************
biological replicate number: 2
technical replicate number: 4
description: Illumina short-read B6/Cast F1 cortex P4 male normal 12k
experiment encode accession: ENCSR037LFG
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB139WTN

value: left cerebral cortex

value: tissue

value: B6/Cast F1 cortex P4 male 2

value: postnatal

value: 4 day

value: ENCBS546HYE at ENCODE; https://www.encodeproject.org/ENCBS546HYE/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: DNase-seq from caudate nucleus (ENCLB712BMX)

description:
https://www.encodeproject.org/experiments/ENCSR754ZSF/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR754ZSF
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB712BMX

source_name: Homo sapiens male adult caudate nucleus tissue

value: caudate nucleus

value: Kristin Ardlie

value: ENCBS594WEY at ENCODE; https://www.encodeproject.org/ENCBS594WEY/


title: snRNA-seq from heart (ENCLB552FVN)

description:
https://www.encodeproject.org/experiments/ENCSR041KFB/
***************
biological replicate number: 2
technical replicate number: 4
description: Illumina short-read B6/Cast F1 heart P14 male normal 12k
experiment encode accession: ENCSR041KFB
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB552FVN

value: heart

value: B6/Cast F1 heart P14 male 2

value: male

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory

value: ENCBS135NXY at ENCODE; https://www.encodeproject.org/ENCBS135NXY/


title: snRNA-seq from left cerebral cortex (ENCLB987ZVH)

description:
https://www.encodeproject.org/experiments/ENCSR037LFG/
***************
biological replicate number: 1
technical replicate number: 2
description: Illumina short-read B6/Cast F1 cortex P4 male normal 12k
experiment encode accession: ENCSR037LFG
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB987ZVH

value: left cerebral cortex

value: B6/Cast F1 cortex P4 male 1

value: ENCBS091LPB at ENCODE; https://www.encodeproject.org/ENCBS091LPB/


title: DNase-seq from amygdala (ENCLB306ATG)

description:
https://www.encodeproject.org/experiments/ENCSR758FVN/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR758FVN
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB306ATG

value: amygdala

value: tissue

value: adult

value: unknown

value: John Stamatoyannopoulos, UW

value: ENCBS561MJK at ENCODE; https://www.encodeproject.org/ENCBS561MJK/


title: DNase-seq from Ammon's horn (ENCLB406ZPY)

description:
https://www.encodeproject.org/experiments/ENCSR754BDW/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR754BDW
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB406ZPY

value: Ammon's horn

value: Kristin Ardlie

value: ENCBS381PSI at ENCODE; https://www.encodeproject.org/ENCBS381PSI/


title: DNase-seq from nucleus accumbens (ENCLB002LMA)

description:
https://www.encodeproject.org/experiments/ENCSR767XFW/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR767XFW
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB002LMA

value: nucleus accumbens

value: male

value: ENCBS767XYJ at ENCODE; https://www.encodeproject.org/ENCBS767XYJ/


title: DNase-seq from Ammon's horn (ENCLB754DTS)

description:
https://www.encodeproject.org/experiments/ENCSR754BDW/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR754BDW
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB754DTS

value: ENCBS471RML at ENCODE; https://www.encodeproject.org/ENCBS471RML/


title: snRNA-seq from left cerebral cortex (ENCLB863MDS)

description:
https://www.encodeproject.org/experiments/ENCSR037LFG/
***************
biological replicate number: 1
technical replicate number: 3
description: Illumina short-read B6/Cast F1 cortex P4 male normal 12k
experiment encode accession: ENCSR037LFG
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB863MDS

value: postnatal

value: 4 day

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: DNase-seq from nucleus accumbens (ENCLB161LCI)

description:
https://www.encodeproject.org/experiments/ENCSR752PPX/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR752PPX
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB161LCI

source_name: Homo sapiens female adult nucleus accumbens tissue

value: tissue

value: female

value: adult

value: ENCBS178FVF at ENCODE; https://www.encodeproject.org/ENCBS178FVF/


title: snRNA-seq from left cerebral cortex (ENCLB839IEH)

description:
https://www.encodeproject.org/experiments/ENCSR037LFG/
***************
biological replicate number: 2
technical replicate number: 2
description: Illumina short-read B6/Cast F1 cortex P4 male normal 12k
experiment encode accession: ENCSR037LFG
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB839IEH

value: left cerebral cortex

value: B6/Cast F1 cortex P4 male 2

value: ENCBS546HYE at ENCODE; https://www.encodeproject.org/ENCBS546HYE/


title: snRNA-seq from left cerebral cortex (ENCLB448UAZ)

description:
https://www.encodeproject.org/experiments/ENCSR037LFG/
***************
biological replicate number: 1
technical replicate number: 5
description: Illumina short-read B6/Cast F1 cortex P4 male normal 12k
experiment encode accession: ENCSR037LFG
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB448UAZ

value: B6/Cast F1 cortex P4 male 1

value: ENCBS091LPB at ENCODE; https://www.encodeproject.org/ENCBS091LPB/


title: snRNA-seq from heart (ENCLB838WQF)

description:
https://www.encodeproject.org/experiments/ENCSR041KFB/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 heart P14 male normal 12k
experiment encode accession: ENCSR041KFB
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB838WQF

value: heart

value: B6/Cast F1 heart P14 male 2

value: male

value: 14 day

value: ENCBS135NXY at ENCODE; https://www.encodeproject.org/ENCBS135NXY/


title: DNase-seq from nucleus accumbens (ENCLB766RHB)

description:
https://www.encodeproject.org/experiments/ENCSR747NFC/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR747NFC
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB766RHB

value: nucleus accumbens

value: unknown

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS224YGC at ENCODE; https://www.encodeproject.org/ENCBS224YGC/


title: DNase-seq from C1 segment of cervical spinal cord (ENCLB853BHV)

description:
https://www.encodeproject.org/experiments/ENCSR748RZI/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR748RZI
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB853BHV

source_name: Homo sapiens male adult C1 segment of cervical spinal cord tissue

value: C1 segment of cervical spinal cord

value: tissue

value: adult

value: ENCBS622MJS at ENCODE; https://www.encodeproject.org/ENCBS622MJS/


title: snRNA-seq from left cerebral cortex (ENCLB517ZQZ)

description:
https://www.encodeproject.org/experiments/ENCSR037LFG/
***************
biological replicate number: 1
technical replicate number: 6
description: Illumina short-read B6/Cast F1 cortex P4 male normal 12k
experiment encode accession: ENCSR037LFG
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB517ZQZ

value: left cerebral cortex

value: postnatal

value: 4 day

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from left cerebral cortex (ENCLB793OAJ)

description:
https://www.encodeproject.org/experiments/ENCSR037LFG/
***************
biological replicate number: 1
technical replicate number: 4
description: Illumina short-read B6/Cast F1 cortex P4 male normal 12k
experiment encode accession: ENCSR037LFG
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB793OAJ

value: B6/Cast F1 cortex P4 male 1

value: male

value: ENCBS091LPB at ENCODE; https://www.encodeproject.org/ENCBS091LPB/


title: DNase-seq from nucleus accumbens (ENCLB950BAJ)

description:
https://www.encodeproject.org/experiments/ENCSR743YEP/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR743YEP
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB950BAJ

value: nucleus accumbens

value: unknown

value: John Stamatoyannopoulos, UW

value: ENCBS230JJQ at ENCODE; https://www.encodeproject.org/ENCBS230JJQ/


title: DNase-seq from caudate nucleus (ENCLB285IRJ)

description:
https://www.encodeproject.org/experiments/ENCSR747KLO/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR747KLO
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB285IRJ

value: caudate nucleus

value: tissue

value: Kristin Ardlie

value: ENCBS336KUS at ENCODE; https://www.encodeproject.org/ENCBS336KUS/


title: DNase-seq from amygdala (ENCLB095ZII)

description:
https://www.encodeproject.org/experiments/ENCSR739UIY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR739UIY
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB095ZII

value: amygdala

value: adult

value: ENCBS973RCO at ENCODE; https://www.encodeproject.org/ENCBS973RCO/


title: snRNA-seq from adrenal gland (ENCLB540USO)

description:
https://www.encodeproject.org/experiments/ENCSR035ZCY/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 adrenal P18-20mo female normal 2k
experiment encode accession: ENCSR035ZCY
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB540USO
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

source_name: Mus musculus strain B6CASTF1/J female adult (18-20 months) adrenal gland tissue nuclear fraction

value: adrenal gland

value: B6/Cast F1 adrenal P18-20mo female 1

value: female

value: 18-20 month

value: Ali Mortazavi, UCI

value: nucleus

value: ENCBS537RFX at ENCODE; https://www.encodeproject.org/ENCBS537RFX/


title: snRNA-seq from adrenal gland (ENCLB970HWV)

description:
https://www.encodeproject.org/experiments/ENCSR035ZCY/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 adrenal P18-20mo female normal 2k
experiment encode accession: ENCSR035ZCY
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB970HWV
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

value: B6/Cast F1 adrenal P18-20mo female 2

value: The Jackson Laboratory

value: ENCBS336XYG at ENCODE; https://www.encodeproject.org/ENCBS336XYG/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: DNase-seq from caudate nucleus (ENCLB733RXQ)

description:
https://www.encodeproject.org/experiments/ENCSR738AGR/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR738AGR
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB733RXQ

value: caudate nucleus

value: tissue

value: male

value: unknown

value: John Stamatoyannopoulos, UW

value: ENCBS211ZED at ENCODE; https://www.encodeproject.org/ENCBS211ZED/


title: snRNA-seq from gastrocnemius (ENCLB873RKB)

description:
https://www.encodeproject.org/experiments/ENCSR026VDA/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 gastrocnemius P2mo male normal 2k
experiment encode accession: ENCSR026VDA
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB873RKB
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

value: gastrocnemius

value: B6/Cast F1 gastrocnemius P2mo male 2

value: adult

value: 2 month

value: ENCBS471TDE at ENCODE; https://www.encodeproject.org/ENCBS471TDE/


title: DNase-seq from amygdala (ENCLB989DVD)

description:
https://www.encodeproject.org/experiments/ENCSR742ZLS/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR742ZLS
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB989DVD

value: amygdala

value: Kristin Ardlie

value: ENCBS590BIW at ENCODE; https://www.encodeproject.org/ENCBS590BIW/


title: DNase-seq from putamen (ENCLB870OTZ)

description:
https://www.encodeproject.org/experiments/ENCSR756MTS/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR756MTS
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-30
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB870OTZ

source_name: Homo sapiens male adult putamen tissue

value: putamen

value: ENCBS748NNN at ENCODE; https://www.encodeproject.org/ENCBS748NNN/


title: snRNA-seq from left cerebral cortex (ENCLB621HLJ)

description:
https://www.encodeproject.org/experiments/ENCSR036OQE/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 cortex P8mo female 8mo 2k
experiment encode accession: ENCSR036OQE
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB621HLJ
nucleic acid starting quantity: 125
nucleic acid starting quantity units: cells

source_name: Mus musculus strain B6CASTF1/J female adult (8 months) left cerebral cortex tissue nuclear fraction

value: left cerebral cortex

value: B6/Cast F1 cortex P8mo female 1

value: female

value: 8 month

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory

value: ENCBS162VAJ at ENCODE; https://www.encodeproject.org/ENCBS162VAJ/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from gastrocnemius (ENCLB522NPO)

description:
https://www.encodeproject.org/experiments/ENCSR026VDA/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 gastrocnemius P2mo male normal 2k
experiment encode accession: ENCSR026VDA
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB522NPO
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

source_name: Mus musculus strain B6CASTF1/J male adult (2 months) gastrocnemius tissue nuclear fraction

value: gastrocnemius

value: tissue

value: B6/Cast F1 gastrocnemius P2mo male 1

value: male

value: adult

value: ENCBS884VMI at ENCODE; https://www.encodeproject.org/ENCBS884VMI/


title: DNase-seq from substantia nigra (ENCLB810RTZ)

description:
https://www.encodeproject.org/experiments/ENCSR732ANC/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR732ANC
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB810RTZ

source_name: Homo sapiens male adult substantia nigra tissue

value: substantia nigra

value: unknown

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS090GFF at ENCODE; https://www.encodeproject.org/ENCBS090GFF/


title: snRNA-seq from gastrocnemius (ENCLB085RML)

description:
https://www.encodeproject.org/experiments/ENCSR019BZL/
***************
biological replicate number: 1
technical replicate number: 2
description: Illumina short-read B6/Cast F1 gastrocnemius P18-20mo male normal 12k
experiment encode accession: ENCSR019BZL
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB085RML

source_name: Mus musculus strain B6CASTF1/J male adult (18-20 months) gastrocnemius tissue nuclear fraction

value: B6/Cast F1 gastrocnemius P18-20mo male 1

value: 18-20 month

value: ENCBS077XIS at ENCODE; https://www.encodeproject.org/ENCBS077XIS/


title: snRNA-seq from gastrocnemius (ENCLB073YVD)

description:
https://www.encodeproject.org/experiments/ENCSR019BZL/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 gastrocnemius P18-20mo male normal 12k
experiment encode accession: ENCSR019BZL
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB073YVD

value: B6/Cast F1 gastrocnemius P18-20mo male 2

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory

value: ENCBS331TRK at ENCODE; https://www.encodeproject.org/ENCBS331TRK/


title: DNase-seq from putamen (ENCLB498IIT)

description:
https://www.encodeproject.org/experiments/ENCSR733NLD/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR733NLD
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB498IIT

value: putamen

value: tissue

value: ENCBS247WCC at ENCODE; https://www.encodeproject.org/ENCBS247WCC/


title: snRNA-seq from gastrocnemius (ENCLB239YET)

description:
https://www.encodeproject.org/experiments/ENCSR019BZL/
***************
biological replicate number: 2
technical replicate number: 2
description: Illumina short-read B6/Cast F1 gastrocnemius P18-20mo male normal 12k
experiment encode accession: ENCSR019BZL
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB239YET

value: gastrocnemius

value: male

value: adult

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: DNase-seq from hypothalamus (ENCLB825ZZG)

description:
https://www.encodeproject.org/experiments/ENCSR721CYZ/
***************
biological replicate number: 3
technical replicate number: 1
description:
experiment encode accession: ENCSR721CYZ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB825ZZG

source_name: Homo sapiens male adult hypothalamus tissue

value: hypothalamus

value: unknown

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS890ZHD at ENCODE; https://www.encodeproject.org/ENCBS890ZHD/


title: DNase-seq from hypothalamus (ENCLB142POU)

description:
https://www.encodeproject.org/experiments/ENCSR721CYZ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR721CYZ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB142POU

value: ENCBS924JOR at ENCODE; https://www.encodeproject.org/ENCBS924JOR/


title: snRNA-seq from gastrocnemius (ENCLB568XXB)

description:
https://www.encodeproject.org/experiments/ENCSR019BZL/
***************
biological replicate number: 2
technical replicate number: 3
description: Illumina short-read B6/Cast F1 gastrocnemius P18-20mo male normal 12k
experiment encode accession: ENCSR019BZL
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB568XXB

value: B6/Cast F1 gastrocnemius P18-20mo male 2

value: 18-20 month

value: Ali Mortazavi, UCI


title: DNase-seq from hypothalamus (ENCLB500FEL)

description:
https://www.encodeproject.org/experiments/ENCSR726FJJ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR726FJJ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB500FEL

value: female

value: ENCBS699RMK at ENCODE; https://www.encodeproject.org/ENCBS699RMK/


title: DNase-seq from caudate nucleus (ENCLB016DLL)

description:
https://www.encodeproject.org/experiments/ENCSR715VWX/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR715VWX
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB016DLL

value: caudate nucleus

value: tissue

value: ENCBS565CPC at ENCODE; https://www.encodeproject.org/ENCBS565CPC/


title: DNase-seq from cerebellum (ENCLB225MDU)

description:
https://www.encodeproject.org/experiments/ENCSR720GHF/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR720GHF
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB225MDU

source_name: Homo sapiens male adult cerebellum tissue

value: cerebellum

value: male

value: ENCBS334KSA at ENCODE; https://www.encodeproject.org/ENCBS334KSA/


title: snRNA-seq from gastrocnemius (ENCLB527VWT)

description:
https://www.encodeproject.org/experiments/ENCSR019BZL/
***************
biological replicate number: 1
technical replicate number: 3
description: Illumina short-read B6/Cast F1 gastrocnemius P18-20mo male normal 12k
experiment encode accession: ENCSR019BZL
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB527VWT

value: gastrocnemius

value: B6/Cast F1 gastrocnemius P18-20mo male 1

value: adult

value: nucleus

value: The Jackson Laboratory

value: ENCBS077XIS at ENCODE; https://www.encodeproject.org/ENCBS077XIS/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: DNase-seq from amygdala (ENCLB039KQS)

description:
https://www.encodeproject.org/experiments/ENCSR712NQU/
***************
biological replicate number: 3
technical replicate number: 1
description:
experiment encode accession: ENCSR712NQU
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB039KQS

source_name: Homo sapiens male adult amygdala tissue

value: amygdala

value: unknown

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS644EAN at ENCODE; https://www.encodeproject.org/ENCBS644EAN/


title: DNase-seq from amygdala (ENCLB979IOP)

description:
https://www.encodeproject.org/experiments/ENCSR712NQU/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR712NQU
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB979IOP

value: tissue

value: ENCBS578HUH at ENCODE; https://www.encodeproject.org/ENCBS578HUH/


title: DNase-seq from anterior cingulate cortex (ENCLB772CVZ)

description:
https://www.encodeproject.org/experiments/ENCSR711ZCQ/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR711ZCQ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB772CVZ

source_name: Homo sapiens female adult anterior cingulate cortex tissue

value: anterior cingulate cortex

value: female

value: ENCBS706UZM at ENCODE; https://www.encodeproject.org/ENCBS706UZM/


title: snRNA-seq from gastrocnemius (ENCLB389ETN)

description:
https://www.encodeproject.org/experiments/ENCSR019BZL/
***************
biological replicate number: 1
technical replicate number: 5
description: Illumina short-read B6/Cast F1 gastrocnemius P18-20mo male normal 12k
experiment encode accession: ENCSR019BZL
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB389ETN

value: gastrocnemius

value: male

value: 18-20 month

value: Ali Mortazavi, UCI


title: DNase-seq from amygdala (ENCLB218JRV)

description:
https://www.encodeproject.org/experiments/ENCSR712NQU/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR712NQU
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB218JRV

value: adult

value: ENCBS299PRI at ENCODE; https://www.encodeproject.org/ENCBS299PRI/


title: snRNA-seq from gastrocnemius (ENCLB090UTO)

description:
https://www.encodeproject.org/experiments/ENCSR019BZL/
***************
biological replicate number: 2
technical replicate number: 5
description: Illumina short-read B6/Cast F1 gastrocnemius P18-20mo male normal 12k
experiment encode accession: ENCSR019BZL
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB090UTO

value: B6/Cast F1 gastrocnemius P18-20mo male 2

value: nucleus

value: The Jackson Laboratory

value: ENCBS331TRK at ENCODE; https://www.encodeproject.org/ENCBS331TRK/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from gastrocnemius (ENCLB799ZBW)

description:
https://www.encodeproject.org/experiments/ENCSR019BZL/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 gastrocnemius P18-20mo male normal 12k
experiment encode accession: ENCSR019BZL
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB799ZBW

value: B6/Cast F1 gastrocnemius P18-20mo male 1

value: ENCBS077XIS at ENCODE; https://www.encodeproject.org/ENCBS077XIS/


title: FKBP-only Dimerizer (16hrs) Rep3

city: Redwood City

first: Altos Labs

last: Bioinformatics Hub

address: 2600 Island Dr.

department: Institute of Technology

institute: Altos Labs

description:
Library name: Sample 69
FZ_23C_T1

data_processing:
Raw sequencing data were demultiplexed using bclconvert. RNA-seq FASTQ files were trimmed, aligned to the human reference genome (GRCh38, v108), and quantified using the nf-core/rnaseq pipeline with the star_salmon option (v3.12.0). Gene-level length-scaled counts were used for all downstream analyses.
Assembly: GRCh38 v108
Supplementary files format and content: salmon.merged.gene_counts_length_scaled.tsv contains gene-level length-scaled estimated counts from Salmon across all samples.
Supplementary files format and content: quant.sf files for each sample contain Salmon transcript-level quantification results.

molecule: polyA RNA

source_name: Brain

growth_protocol: U-2 OS (ATCC HTB-96), H4 (ATCC HTB-148), and HEK-293 (ATCC CRL-1573) cells were cultured in Dulbecco’s Modified Eagle Medium (DMEM) supplemented with 10% fetal bovine serum (FBS) and 1X GlutaMax (Gibco). All cell lines used in the study tested negative for Mycoplasma contamination when assayed with the Universal Mycoplasma Detection Kit.

extract_protocol:
Total RNA was extracted from ~200K cells using the Promega Maxwell automated RNA extractor following the manufacturer’s recommendations.
Libraries were prepared according to the Illumina Stranded mRNA Library Prep Kits (Illumina #20040534) protocol, using 200 ng of RNA input, and sequenced on an Illumina NovaSeq X+.

tag: tissue

value: Brain

value: Male

tag: cell line

tag: cell type

value: epithelial

tag: treatment

value: Dimerizer


title: snRNA-seq from gastrocnemius (ENCLB919SFH)

description:
https://www.encodeproject.org/experiments/ENCSR019BZL/
***************
biological replicate number: 1
technical replicate number: 4
description: Illumina short-read B6/Cast F1 gastrocnemius P18-20mo male normal 12k
experiment encode accession: ENCSR019BZL
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB919SFH

value: gastrocnemius

value: tissue


title: DNase-seq from hypothalamus (ENCLB721ESX)

description:
https://www.encodeproject.org/experiments/ENCSR721CYZ/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR721CYZ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB721ESX

value: hypothalamus

value: male

value: unknown

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS440IAD at ENCODE; https://www.encodeproject.org/ENCBS440IAD/


title: DNase-seq from anterior cingulate cortex (ENCLB817QIJ)

description:
https://www.encodeproject.org/experiments/ENCSR706XMF/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR706XMF
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB817QIJ

value: anterior cingulate cortex

value: female

value: adult

value: ENCBS681DFA at ENCODE; https://www.encodeproject.org/ENCBS681DFA/


title: DNase-seq from substantia nigra (ENCLB362IXT)

description:
https://www.encodeproject.org/experiments/ENCSR702ZLX/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR702ZLX
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB362IXT

value: substantia nigra

value: ENCBS647VFH at ENCODE; https://www.encodeproject.org/ENCBS647VFH/


title: FKBP-only Dimerizer (24hrs) Rep2

description:
Library name: Sample 71
FZ_24B_T1

value: Brain

value: Male


title: DNase-seq from amygdala (ENCLB939WQT)

description:
https://www.encodeproject.org/experiments/ENCSR701IOE/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR701IOE
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB939WQT

source_name: Homo sapiens female adult amygdala tissue

value: amygdala

value: ENCBS389DRS at ENCODE; https://www.encodeproject.org/ENCBS389DRS/


title: FKBP-only Dimerizer (16hrs) Rep1

description:
Library name: Sample 67
FZ_23A_T1

value: epithelial

value: Dimerizer


title: FKBP-only Dimerizer (8hrs) Rep3

description:
Library name: Sample 66
FZ_22C_T1


title: DNase-seq from substantia nigra (ENCLB733SHV)

description:
https://www.encodeproject.org/experiments/ENCSR694YEJ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR694YEJ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB733SHV

value: tissue

value: male

value: ENCBS038GBK at ENCODE; https://www.encodeproject.org/ENCBS038GBK/


title: DNase-seq from anterior cingulate cortex (ENCLB686OKB)

description:
https://www.encodeproject.org/experiments/ENCSR711ZCQ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR711ZCQ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB686OKB

value: unknown

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS092VFX at ENCODE; https://www.encodeproject.org/ENCBS092VFX/


title: FKBP-only Dimerizer (24hrs) Rep1

description:
Library name: Sample 70
FZ_24A_T1


title: DNase-seq from anterior cingulate cortex (ENCLB369ZGX)

description:
https://www.encodeproject.org/experiments/ENCSR706XMF/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR706XMF
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB369ZGX

value: anterior cingulate cortex

value: female

value: adult

value: ENCBS755BYQ at ENCODE; https://www.encodeproject.org/ENCBS755BYQ/


title: FKBP-only Dimerizer (24hrs) Rep3

description:
Library name: Sample 72
FZ_24C_T1

value: Brain


title: FKBP-only Dimerizer (16hrs) Rep2

description:
Library name: Sample 68
FZ_23B_T1

value: Male


title: FKBP-only Dimerizer (8hrs) Rep2

description:
Library name: Sample 65
FZ_22B_T1


title: DNase-seq from caudate nucleus (ENCLB105RRH)

description:
https://www.encodeproject.org/experiments/ENCSR694QES/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR694QES
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB105RRH

value: caudate nucleus

value: ENCBS750LLL at ENCODE; https://www.encodeproject.org/ENCBS750LLL/


title: FKBP-only Dimerizer (4hrs) Rep1

description:
Library name: Sample 61
FZ_21A_T1

value: epithelial


title: DNase-seq from anterior cingulate cortex (ENCLB082KHJ)

description:
https://www.encodeproject.org/experiments/ENCSR691SIC/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR691SIC
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB082KHJ

source_name: Homo sapiens male adult anterior cingulate cortex tissue

value: ENCBS382NRS at ENCODE; https://www.encodeproject.org/ENCBS382NRS/


title: FKBP-only Dimerizer (8hrs) Rep1

description:
Library name: Sample 64
FZ_22A_T1

value: Dimerizer


title: FKBP-only Dimerizer (2hrs) Rep2

description:
Library name: Sample 59
FZ_20B_T1


title: FKBP-only Dimerizer (4hrs) Rep3

description:
Library name: Sample 63
FZ_21C_T1


title: DNase-seq from anterior cingulate cortex (ENCLB958RQR)

description:
https://www.encodeproject.org/experiments/ENCSR691TRJ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR691TRJ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB958RQR

value: tissue

value: ENCBS926AUN at ENCODE; https://www.encodeproject.org/ENCBS926AUN/


title: snRNA-seq from gastrocnemius (ENCLB104TZJ)

description:
https://www.encodeproject.org/experiments/ENCSR019BZL/
***************
biological replicate number: 2
technical replicate number: 4
description: Illumina short-read B6/Cast F1 gastrocnemius P18-20mo male normal 12k
experiment encode accession: ENCSR019BZL
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB104TZJ

value: gastrocnemius

value: B6/Cast F1 gastrocnemius P18-20mo male 2

value: male

value: 18-20 month

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory

value: ENCBS331TRK at ENCODE; https://www.encodeproject.org/ENCBS331TRK/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: FKBP-only Dimerizer (4hrs) Rep2

description:
Library name: Sample 62
FZ_21B_T1

value: Brain

value: Male


title: DNase-seq from nucleus accumbens (ENCLB469VTB)

description:
https://www.encodeproject.org/experiments/ENCSR698SGQ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR698SGQ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB469VTB

value: nucleus accumbens

value: female

value: adult

value: unknown

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS540DNN at ENCODE; https://www.encodeproject.org/ENCBS540DNN/


title: FKBP-only Dimerizer (2hrs) Rep1

description:
Library name: Sample 58
FZ_20A_T1

value: epithelial

value: Dimerizer


title: DNase-seq from cerebellum (ENCLB078CQU)

description:
https://www.encodeproject.org/experiments/ENCSR689LJP/
***************
biological replicate number: 3
technical replicate number: 1
description:
experiment encode accession: ENCSR689LJP
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB078CQU

value: cerebellum

value: tissue

value: male

value: ENCBS196TWQ at ENCODE; https://www.encodeproject.org/ENCBS196TWQ/


title: FKBP-only Dimerizer (0hrs) Rep3

description:
Library name: Sample 57
FZ_19C_T1


title: DNase-seq from cerebellum (ENCLB159FFT)

description:
https://www.encodeproject.org/experiments/ENCSR689LJP/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR689LJP
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB159FFT

value: ENCBS867VMH at ENCODE; https://www.encodeproject.org/ENCBS867VMH/


title: FKBP-only Dimerizer (0hrs) Rep2

description:
Library name: Sample 56
FZ_19B_T1


title: DNase-seq from putamen (ENCLB304JII)

description:
https://www.encodeproject.org/experiments/ENCSR689AYP/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR689AYP
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB304JII

value: putamen

value: ENCBS156RIK at ENCODE; https://www.encodeproject.org/ENCBS156RIK/


title: FKBP-PKR-inactive Dimerizer (24hrs) Rep2

description:
Library name: Sample 53
FZ_18B_T1

value: Brain

value: Male


title: FKBP-PKR-inactive Dimerizer (24hrs) Rep3

description:
Library name: Sample 54
FZ_18C_T1


title: DNase-seq from caudate nucleus (ENCLB325PJL)

description:
https://www.encodeproject.org/experiments/ENCSR687QUX/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR687QUX
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB325PJL

value: caudate nucleus

value: ENCBS543JHL at ENCODE; https://www.encodeproject.org/ENCBS543JHL/


title: DNase-seq from hypothalamus (ENCLB699XEM)

description:
https://www.encodeproject.org/experiments/ENCSR689AKJ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR689AKJ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB699XEM

value: hypothalamus

value: adult

value: unknown

value: ENCBS857RXA at ENCODE; https://www.encodeproject.org/ENCBS857RXA/


title: DNase-seq from dorsolateral prefrontal cortex (ENCLB818EWH)

description:
https://www.encodeproject.org/experiments/ENCSR688HDU/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR688HDU
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB818EWH

source_name: Homo sapiens female adult dorsolateral prefrontal cortex tissue

value: dorsolateral prefrontal cortex

value: female

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS178WMZ at ENCODE; https://www.encodeproject.org/ENCBS178WMZ/


title: DNase-seq from cerebellum (ENCLB837VPR)

description:
https://www.encodeproject.org/experiments/ENCSR689LJP/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR689LJP
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB837VPR

value: cerebellum

value: tissue

value: male

value: ENCBS095POW at ENCODE; https://www.encodeproject.org/ENCBS095POW/


title: DNase-seq from caudate nucleus (ENCLB389TGO)

description:
https://www.encodeproject.org/experiments/ENCSR688LIZ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR688LIZ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB389TGO

source_name: Homo sapiens male adult caudate nucleus tissue

value: ENCBS592YMR at ENCODE; https://www.encodeproject.org/ENCBS592YMR/


title: FKBP-PKR-inactive Dimerizer (16hrs) Rep3

description:
Library name: Sample 51
FZ_17C_T1

value: Brain

value: Male

value: epithelial

value: Dimerizer


title: DNase-seq from hypothalamus (ENCLB483IFH)

description:
https://www.encodeproject.org/experiments/ENCSR681JWS/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR681JWS
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB483IFH

value: hypothalamus

value: adult

value: ENCBS497TZC at ENCODE; https://www.encodeproject.org/ENCBS497TZC/


title: FKBP-only Dimerizer (0hrs) Rep1

description:
Library name: Sample 55
FZ_19A_T1


title: snRNA-seq from left cerebral cortex (ENCLB994DPH)

description:
https://www.encodeproject.org/experiments/ENCSR036OQE/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 cortex P8mo female 8mo 2k
experiment encode accession: ENCSR036OQE
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB994DPH
nucleic acid starting quantity: 125
nucleic acid starting quantity units: cells

value: left cerebral cortex

value: B6/Cast F1 cortex P8mo female 2

value: 8 month

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory

value: ENCBS127IKP at ENCODE; https://www.encodeproject.org/ENCBS127IKP/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: FKBP-PKR-inactive Dimerizer (16hrs) Rep2

description:
Library name: Sample 50
FZ_17B_T1


title: FKBP-only Dimerizer (2hrs) Rep3

description:
Library name: Sample 60
FZ_20C_T1


title: FKBP-PKR-inactive Dimerizer (24hrs) Rep1

description:
Library name: Sample 52
FZ_18A_T1


title: DNase-seq from caudate nucleus (ENCLB216JWX)

description:
https://www.encodeproject.org/experiments/ENCSR679RZN/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR679RZN
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB216JWX

value: caudate nucleus

value: tissue

value: male

value: unknown

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS621AFW at ENCODE; https://www.encodeproject.org/ENCBS621AFW/


title: DNase-seq from dorsolateral prefrontal cortex (ENCLB617HMY)

description:
https://www.encodeproject.org/experiments/ENCSR679OSG/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR679OSG
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB617HMY

source_name: Homo sapiens male adult dorsolateral prefrontal cortex tissue

value: dorsolateral prefrontal cortex

value: adult

value: ENCBS231ZHS at ENCODE; https://www.encodeproject.org/ENCBS231ZHS/


title: FKBP-PKR-inactive Dimerizer (16hrs) Rep1

description:
Library name: Sample 49
FZ_17A_T1

value: Brain

value: Male

value: epithelial

value: Dimerizer


title: FKBP-PKR-inactive Dimerizer (8hrs) Rep3

description:
Library name: Sample 48
FZ_16C_T1


title: FKBP-PKR-inactive Dimerizer (8hrs) Rep1

description:
Library name: Sample 46
FZ_16A_T1


title: DNase-seq from anterior cingulate cortex (ENCLB766LSD)

description:
https://www.encodeproject.org/experiments/ENCSR674VIK/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR674VIK
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB766LSD

value: anterior cingulate cortex

value: ENCBS824BNP at ENCODE; https://www.encodeproject.org/ENCBS824BNP/


title: FKBP-PKR-inactive Dimerizer (8hrs) Rep2

description:
Library name: Sample 47
FZ_16B_T1


title: DNase-seq from nucleus accumbens (ENCLB839FJZ)

description:
https://www.encodeproject.org/experiments/ENCSR678LTS/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR678LTS
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB839FJZ

source_name: Homo sapiens male adult nucleus accumbens tissue

value: nucleus accumbens

value: ENCBS850ORV at ENCODE; https://www.encodeproject.org/ENCBS850ORV/


title: DNase-seq from nucleus accumbens (ENCLB402LRD)

description:
https://www.encodeproject.org/experiments/ENCSR674QAG/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR674QAG
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB402LRD

value: tissue

value: ENCBS358UDS at ENCODE; https://www.encodeproject.org/ENCBS358UDS/


title: FKBP-PKR-inactive Dimerizer (4hrs) Rep3

description:
Library name: Sample 45
FZ_15C_T1


title: DNase-seq from cerebellum (ENCLB814OIG)

description:
https://www.encodeproject.org/experiments/ENCSR674AVG/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR674AVG
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB814OIG

value: cerebellum

value: male

value: unknown

value: ENCBS106QGM at ENCODE; https://www.encodeproject.org/ENCBS106QGM/


title: FKBP-PKR-inactive Dimerizer (4hrs) Rep2

description:
Library name: Sample 44
FZ_15B_T1


title: DNase-seq from substantia nigra (ENCLB232ATO)

description:
https://www.encodeproject.org/experiments/ENCSR673DPE/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR673DPE
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB232ATO

value: substantia nigra

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS198BYE at ENCODE; https://www.encodeproject.org/ENCBS198BYE/


title: FKBP-PKR-inactive Dimerizer (2hrs) Rep3

description:
Library name: Sample 42
FZ_14C_T1

value: Brain

value: Male


title: FKBP-PKR-inactive Dimerizer (4hrs) Rep1

description:
Library name: Sample 43
FZ_15A_T1

value: epithelial

value: Dimerizer


title: DNase-seq from cerebellum (ENCLB902BLZ)

description:
https://www.encodeproject.org/experiments/ENCSR672VOY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR672VOY
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB902BLZ

value: adult

value: ENCBS797JWZ at ENCODE; https://www.encodeproject.org/ENCBS797JWZ/


title: FKBP-PKR-inactive Dimerizer (2hrs) Rep1

description:
Library name: Sample 40
FZ_14A_T1


title: FKBP-PKR-inactive Dimerizer (2hrs) Rep2

description:
Library name: Sample 41
FZ_14B_T1


title: DNase-seq from amygdala (ENCLB330BIZ)

description:
https://www.encodeproject.org/experiments/ENCSR668XRU/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR668XRU
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB330BIZ

value: amygdala

value: ENCBS203OMY at ENCODE; https://www.encodeproject.org/ENCBS203OMY/


title: DNase-seq from amygdala (ENCLB244XYH)

description:
https://www.encodeproject.org/experiments/ENCSR668XRU/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR668XRU
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB244XYH

value: tissue

value: ENCBS893KBS at ENCODE; https://www.encodeproject.org/ENCBS893KBS/


title: FKBP-PKR-inactive Dimerizer (0hrs) Rep3

description:
Library name: Sample 39
FZ_13C_T1


title: DNase-seq from hypothalamus (ENCLB028TAU)

description:
https://www.encodeproject.org/experiments/ENCSR666GIK/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR666GIK
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB028TAU

value: hypothalamus

value: male

value: ENCBS778QUJ at ENCODE; https://www.encodeproject.org/ENCBS778QUJ/


title: FKBP-PKR-inactive Dimerizer (0hrs) Rep2

description:
Library name: Sample 38
FZ_13B_T1


title: DNase-seq from Ammon's horn (ENCLB485CBF)

description:
https://www.encodeproject.org/experiments/ENCSR661CHK/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR661CHK
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB485CBF

source_name: Homo sapiens male adult Ammon's horn tissue

value: Ammon's horn

value: unknown

value: ENCBS686PGS at ENCODE; https://www.encodeproject.org/ENCBS686PGS/


title: FKBP-PKR 4u8C + Dimerizer (24hrs) Rep2

description:
Library name: Sample 35
FZ_12B_T1

value: 4u8C + Dimerizer


title: DNase-seq from hypothalamus (ENCLB403QWZ)

description:
https://www.encodeproject.org/experiments/ENCSR681JWS/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR681JWS
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB403QWZ

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS540ZQB at ENCODE; https://www.encodeproject.org/ENCBS540ZQB/


title: DNase-seq from dorsolateral prefrontal cortex (ENCLB256KYW)

description:
https://www.encodeproject.org/experiments/ENCSR660GZY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR660GZY
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB256KYW

value: dorsolateral prefrontal cortex

value: female

value: ENCBS291EPW at ENCODE; https://www.encodeproject.org/ENCBS291EPW/


title: DNase-seq from substantia nigra (ENCLB354LQQ)

description:
https://www.encodeproject.org/experiments/ENCSR660HSO/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR660HSO
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB354LQQ

source_name: Homo sapiens female adult substantia nigra tissue

value: substantia nigra

value: adult

value: ENCBS332HBD at ENCODE; https://www.encodeproject.org/ENCBS332HBD/


title: FKBP-PKR 4u8C + Dimerizer (24hrs) Rep3

description:
Library name: Sample 36
FZ_12C_T1

value: Brain

value: Male

value: epithelial


title: FKBP-PKR 4u8C + Dimerizer (24hrs) Rep1

description:
Library name: Sample 34
FZ_12A_T1


title: FKBP-PKR 4u8C + Dimerizer (16hrs) Rep3

description:
Library name: Sample 33
FZ_11C_T1


title: DNase-seq from amygdala (ENCLB666IDJ)

description:
https://www.encodeproject.org/experiments/ENCSR658EUG/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR658EUG
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB666IDJ

value: amygdala

value: tissue

value: male

value: ENCBS627QSL at ENCODE; https://www.encodeproject.org/ENCBS627QSL/


title: DNase-seq from putamen (ENCLB347ZLX)

description:
https://www.encodeproject.org/experiments/ENCSR656QJP/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR656QJP
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB347ZLX

source_name: Homo sapiens male adult putamen tissue

value: putamen

value: unknown

value: ENCBS313BXI at ENCODE; https://www.encodeproject.org/ENCBS313BXI/


title: DNase-seq from anterior cingulate cortex (ENCLB767OKD)

description:
https://www.encodeproject.org/experiments/ENCSR657SFP/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR657SFP
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB767OKD

value: anterior cingulate cortex

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS971JSS at ENCODE; https://www.encodeproject.org/ENCBS971JSS/


title: FKBP-PKR 4u8C + Dimerizer (8hrs) Rep3

description:
Library name: Sample 30
FZ_10C_T1

value: 4u8C + Dimerizer


title: FKBP-PKR 4u8C + Dimerizer (16hrs) Rep1

description:
Library name: Sample 31
FZ_11A_T1


title: DNase-seq from cerebellum (ENCLB070CTC)

description:
https://www.encodeproject.org/experiments/ENCSR654CUJ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR654CUJ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB070CTC

value: cerebellum

value: adult

value: ENCBS736WMG at ENCODE; https://www.encodeproject.org/ENCBS736WMG/


title: FKBP-PKR 4u8C + Dimerizer (8hrs) Rep1

description:
Library name: Sample 28
FZ_10A_T1

value: Brain

value: Male


title: FKBP-PKR 4u8C + Dimerizer (8hrs) Rep2

description:
Library name: Sample 29
FZ_10B_T1

value: epithelial


title: DNase-seq from dorsolateral prefrontal cortex (ENCLB966COU)

description:
https://www.encodeproject.org/experiments/ENCSR651FQS/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR651FQS
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB966COU

value: dorsolateral prefrontal cortex

value: tissue

value: ENCBS254LKQ at ENCODE; https://www.encodeproject.org/ENCBS254LKQ/


title: DNase-seq from amygdala (ENCLB369MEB)

description:
https://www.encodeproject.org/experiments/ENCSR661CZE/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR661CZE
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB369MEB

value: amygdala

value: male

value: ENCBS401KCN at ENCODE; https://www.encodeproject.org/ENCBS401KCN/


title: DNase-seq from anterior cingulate cortex (ENCLB074KJK)

description:
https://www.encodeproject.org/experiments/ENCSR648HYQ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR648HYQ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB074KJK

value: anterior cingulate cortex

value: unknown

value: ENCBS639ZHY at ENCODE; https://www.encodeproject.org/ENCBS639ZHY/


title: DNase-seq from substantia nigra (ENCLB585EEV)

description:
https://www.encodeproject.org/experiments/ENCSR650URF/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR650URF
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB585EEV

value: substantia nigra

value: female

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS934URH at ENCODE; https://www.encodeproject.org/ENCBS934URH/


title: FKBP-PKR 4u8C + Dimerizer (16hrs) Rep2

description:
Library name: Sample 32
FZ_11B_T1

value: Brain

value: 4u8C + Dimerizer


title: DNase-seq from anterior cingulate cortex (ENCLB572QKK)

description:
https://www.encodeproject.org/experiments/ENCSR646CJG/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR646CJG
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB572QKK

value: adult

value: ENCBS806EHY at ENCODE; https://www.encodeproject.org/ENCBS806EHY/


title: FKBP-PKR 4u8C + Dimerizer (2hrs) Rep2

description:
Library name: Sample 23
FZ_8B_T1

value: Male

value: epithelial


title: FKBP-PKR-inactive Dimerizer (0hrs) Rep1

description:
Library name: Sample 37
FZ_13A_T1

value: Dimerizer


title: FKBP-PKR 4u8C + Dimerizer (4hrs) Rep2

description:
Library name: Sample 26
FZ_9B_T1


title: DNase-seq from caudate nucleus (ENCLB888FFZ)

description:
https://www.encodeproject.org/experiments/ENCSR644PBL/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR644PBL
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB888FFZ

value: caudate nucleus

value: tissue

value: male

value: ENCBS770UNO at ENCODE; https://www.encodeproject.org/ENCBS770UNO/


title: DNase-seq from nucleus accumbens (ENCLB464QHC)

description:
https://www.encodeproject.org/experiments/ENCSR648AAH/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR648AAH
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB464QHC

source_name: Homo sapiens female adult nucleus accumbens tissue

value: nucleus accumbens

value: unknown

value: ENCBS051QOT at ENCODE; https://www.encodeproject.org/ENCBS051QOT/


title: FKBP-PKR 4u8C + Dimerizer (2hrs) Rep3

description:
Library name: Sample 24
FZ_8C_T1


title: FKBP-PKR 4u8C + Dimerizer (2hrs) Rep1

description:
Library name: Sample 22
FZ_8A_T1


title: DNase-seq from substantia nigra (ENCLB061LIG)

description:
https://www.encodeproject.org/experiments/ENCSR644KXH/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR644KXH
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB061LIG

source_name: Homo sapiens male adult substantia nigra tissue

value: substantia nigra

value: John Stamatoyannopoulos, UW

value: ENCBS853EJY at ENCODE; https://www.encodeproject.org/ENCBS853EJY/


title: DNase-seq from anterior cingulate cortex (ENCLB206XMG)

description:
https://www.encodeproject.org/experiments/ENCSR646KWH/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR646KWH
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB206XMG

value: anterior cingulate cortex

value: Kristin Ardlie

value: ENCBS572UPQ at ENCODE; https://www.encodeproject.org/ENCBS572UPQ/


title: FKBP-PKR 4u8C + Dimerizer (0hrs) Rep3

description:
Library name: Sample 21
FZ_7C_T1

value: Brain

value: 4u8C + Dimerizer


title: DNase-seq from substantia nigra (ENCLB296UJD)

description:
https://www.encodeproject.org/experiments/ENCSR640MXT/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR640MXT
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB296UJD

value: female

value: adult

value: ENCBS160DAN at ENCODE; https://www.encodeproject.org/ENCBS160DAN/


title: FKBP-PKR Dimerizer (24hrs) Rep3

description:
Library name: Sample 18
FZ_6C_T1

value: Male

value: epithelial

value: Dimerizer


title: FKBP-PKR 4u8C + Dimerizer (0hrs) Rep2

description:
Library name: Sample 20
FZ_7B_T1


title: FKBP-PKR 4u8C + Dimerizer (4hrs) Rep1

description:
Library name: Sample 25
FZ_9A_T1