title: DNase-seq from anterior cingulate cortex (ENCLB568IKV)

description:
https://www.encodeproject.org/experiments/ENCSR911UFI/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR911UFI
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB568IKV

source_name: Homo sapiens female adult anterior cingulate cortex tissue

value: anterior cingulate cortex

value: adult

value: unknown

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS138AOW at ENCODE; https://www.encodeproject.org/ENCBS138AOW/


title: DNase-seq from nucleus accumbens (ENCLB537BFN)

status: Public on Mar 06 2026

type: SRA

city: Stanford

first: ENCODE

last: DCC

state: CA

address: 300 Pasteur Dr

country: USA

institute: ENCODE DCC

description:
https://www.encodeproject.org/experiments/ENCSR909XMW/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR909XMW
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB537BFN

library_source: genomic

data_processing: See GSM*_README.txt supplementary file linked below

molecule: genomic DNA

organism: Homo sapiens

source_name: Homo sapiens male adult nucleus accumbens tissue

value: nucleus accumbens

value: tissue

tag: biosample encode accession

tag: encode accession

tag: Sex

value: male

tag: dev stage

tag: age

tag: lab

tag: source

tag: link

value: ENCBS324UQN at ENCODE; https://www.encodeproject.org/ENCBS324UQN/


title: DNase-seq from nucleus accumbens (ENCLB448ODR)

description:
https://www.encodeproject.org/experiments/ENCSR909XMW/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR909XMW
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB448ODR

value: ENCBS997ECO at ENCODE; https://www.encodeproject.org/ENCBS997ECO/


title: DNase-seq from nucleus accumbens (ENCLB306ORV)

description:
https://www.encodeproject.org/experiments/ENCSR913TJG/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR913TJG
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB306ORV

source_name: Homo sapiens female adult nucleus accumbens tissue

value: female

value: ENCBS536ZEJ at ENCODE; https://www.encodeproject.org/ENCBS536ZEJ/


title: DNase-seq from cerebellum (ENCLB987GYS)

description:
https://www.encodeproject.org/experiments/ENCSR918UPX/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR918UPX
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB987GYS

source_name: Homo sapiens male adult cerebellum tissue

value: cerebellum

value: ENCBS066BYH at ENCODE; https://www.encodeproject.org/ENCBS066BYH/


title: snRNA-seq from heart (ENCLB863LRS)

description:
https://www.encodeproject.org/experiments/ENCSR122DEZ/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 heart P4 female normal 2k
experiment encode accession: ENCSR122DEZ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB863LRS
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

library_source: transcriptomic

molecule: total RNA

organism: Mus musculus

source_name: Mus musculus strain B6CASTF1/J female postnatal (4 days) heart tissue nuclear fraction

value: heart

tag: description

value: B6/Cast F1 heart P4 female 2

value: postnatal

value: 4 day

value: Ali Mortazavi, UCI

tag: subcellular fraction term name

value: nucleus

value: The Jackson Laboratory

value: ENCBS229UTD at ENCODE; https://www.encodeproject.org/ENCBS229UTD/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from layer of hippocampus (ENCLB998CDS)

description:
https://www.encodeproject.org/experiments/ENCSR127LUZ/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 hippocampus P10 male normal 2k
experiment encode accession: ENCSR127LUZ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB998CDS
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

source_name: Mus musculus strain B6CASTF1/J male postnatal (10 days) layer of hippocampus tissue nuclear fraction

value: layer of hippocampus

value: tissue

value: B6/Cast F1 hippocampus P10 male 1

value: 10 day

value: ENCBS749DZM at ENCODE; https://www.encodeproject.org/ENCBS749DZM/


title: snRNA-seq from heart (ENCLB570ZQE)

description:
https://www.encodeproject.org/experiments/ENCSR125HRM/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 heart P14 female normal 2k
experiment encode accession: ENCSR125HRM
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB570ZQE
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

source_name: Mus musculus strain B6CASTF1/J female postnatal (14 days) heart tissue nuclear fraction

value: B6/Cast F1 heart P14 female 1

value: female

value: 14 day

value: ENCBS598PEZ at ENCODE; https://www.encodeproject.org/ENCBS598PEZ/


title: snRNA-seq from heart (ENCLB534VTN)

description:
https://www.encodeproject.org/experiments/ENCSR122DEZ/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 heart P4 female normal 2k
experiment encode accession: ENCSR122DEZ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB534VTN
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

value: heart

value: B6/Cast F1 heart P4 female 1

value: ENCBS315GYQ at ENCODE; https://www.encodeproject.org/ENCBS315GYQ/


title: DNase-seq from putamen (ENCLB764ANN)

description:
https://www.encodeproject.org/experiments/ENCSR907NES/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR907NES
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB764ANN

source_name: Homo sapiens male adult putamen tissue

value: putamen

value: male

value: adult

value: unknown

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS483DZK at ENCODE; https://www.encodeproject.org/ENCBS483DZK/


title: DNase-seq from amygdala (ENCLB828GAH)

description:
https://www.encodeproject.org/experiments/ENCSR907FQX/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR907FQX
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB828GAH

source_name: Homo sapiens female adult amygdala tissue

value: amygdala

value: tissue

value: ENCBS335VTP at ENCODE; https://www.encodeproject.org/ENCBS335VTP/


title: snRNA-seq from left cerebral cortex (ENCLB290SWQ)

description:
https://www.encodeproject.org/experiments/ENCSR118FCJ/
***************
biological replicate number: 1
technical replicate number: 3
description: Illumina short-read B6/Cast F1 cortex P14 male normal 12k
experiment encode accession: ENCSR118FCJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB290SWQ

source_name: Mus musculus strain B6CASTF1/J male postnatal (14 days) left cerebral cortex tissue nuclear fraction

value: left cerebral cortex

value: B6/Cast F1 cortex P14 male 1

value: postnatal

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory

value: ENCBS819SOQ at ENCODE; https://www.encodeproject.org/ENCBS819SOQ/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: DNase-seq from Ammon's horn (ENCLB073CIQ)

description:
https://www.encodeproject.org/experiments/ENCSR905ECO/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR905ECO
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB073CIQ

source_name: Homo sapiens female adult Ammon's horn tissue

value: Ammon's horn

value: female

value: ENCBS840LUN at ENCODE; https://www.encodeproject.org/ENCBS840LUN/


title: snRNA-seq from left cerebral cortex (ENCLB066LUV)

description:
https://www.encodeproject.org/experiments/ENCSR132KMR/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 cortex P36 male normal 2k
experiment encode accession: ENCSR132KMR
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB066LUV
nucleic acid starting quantity: 42
nucleic acid starting quantity units: cells

source_name: Mus musculus strain B6CASTF1/J male postnatal (36 days) left cerebral cortex tissue nuclear fraction

value: B6/Cast F1 cortex P36 male 1

value: male

value: 36 day

value: ENCBS437MUU at ENCODE; https://www.encodeproject.org/ENCBS437MUU/


title: DNase-seq from Ammon's horn (ENCLB922VVK)

description:
https://www.encodeproject.org/experiments/ENCSR905ECO/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR905ECO
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB922VVK

value: tissue

value: adult

value: unknown

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS397JTI at ENCODE; https://www.encodeproject.org/ENCBS397JTI/


title: snRNA-seq from layer of hippocampus (ENCLB538QVH)

description:
https://www.encodeproject.org/experiments/ENCSR127LUZ/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 hippocampus P10 male normal 2k
experiment encode accession: ENCSR127LUZ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB538QVH
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

value: layer of hippocampus

value: B6/Cast F1 hippocampus P10 male 2

value: postnatal

value: 10 day

value: Ali Mortazavi, UCI

value: nucleus

value: ENCBS578PCE at ENCODE; https://www.encodeproject.org/ENCBS578PCE/


title: snRNA-seq from left cerebral cortex (ENCLB141HOZ)

description:
https://www.encodeproject.org/experiments/ENCSR118FCJ/
***************
biological replicate number: 1
technical replicate number: 5
description: Illumina short-read B6/Cast F1 cortex P14 male normal 12k
experiment encode accession: ENCSR118FCJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB141HOZ

value: left cerebral cortex

value: B6/Cast F1 cortex P14 male 1

value: 14 day

value: The Jackson Laboratory

value: ENCBS819SOQ at ENCODE; https://www.encodeproject.org/ENCBS819SOQ/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from left cerebral cortex (ENCLB321GSN)

description:
https://www.encodeproject.org/experiments/ENCSR118FCJ/
***************
biological replicate number: 1
technical replicate number: 4
description: Illumina short-read B6/Cast F1 cortex P14 male normal 12k
experiment encode accession: ENCSR118FCJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB321GSN

value: tissue

value: male


title: DNase-seq from nucleus accumbens (ENCLB652BAI)

description:
https://www.encodeproject.org/experiments/ENCSR907ZGE/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR907ZGE
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB652BAI

value: nucleus accumbens

value: adult

value: unknown

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS629TGU at ENCODE; https://www.encodeproject.org/ENCBS629TGU/


title: snRNA-seq from left cerebral cortex (ENCLB096OHB)

description:
https://www.encodeproject.org/experiments/ENCSR118FCJ/
***************
biological replicate number: 1
technical replicate number: 2
description: Illumina short-read B6/Cast F1 cortex P14 male normal 12k
experiment encode accession: ENCSR118FCJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB096OHB

value: postnatal

value: Ali Mortazavi, UCI


title: DNase-seq from hypothalamus (ENCLB190VBV)

description:
https://www.encodeproject.org/experiments/ENCSR909HJB/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR909HJB
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB190VBV

source_name: Homo sapiens female adult hypothalamus tissue

value: hypothalamus

value: female

value: ENCBS540RUK at ENCODE; https://www.encodeproject.org/ENCBS540RUK/


title: DNase-seq from caudate nucleus (ENCLB134DGU)

description:
https://www.encodeproject.org/experiments/ENCSR902OAY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR902OAY
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB134DGU

source_name: Homo sapiens female adult caudate nucleus tissue

value: caudate nucleus

value: ENCBS638YQG at ENCODE; https://www.encodeproject.org/ENCBS638YQG/


title: DNase-seq from cerebellum (ENCLB554XGO)

description:
https://www.encodeproject.org/experiments/ENCSR904VLC/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR904VLC
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB554XGO

value: cerebellum

value: ENCBS998AZJ at ENCODE; https://www.encodeproject.org/ENCBS998AZJ/


title: snRNA-seq from left cerebral cortex (ENCLB291TDM)

description:
https://www.encodeproject.org/experiments/ENCSR118FCJ/
***************
biological replicate number: 2
technical replicate number: 2
description: Illumina short-read B6/Cast F1 cortex P14 male normal 12k
experiment encode accession: ENCSR118FCJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB291TDM

value: left cerebral cortex

value: tissue

value: B6/Cast F1 cortex P14 male 2

value: 14 day

value: nucleus

value: The Jackson Laboratory

value: ENCBS368BFZ at ENCODE; https://www.encodeproject.org/ENCBS368BFZ/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: DNase-seq from anterior cingulate cortex (ENCLB167VXE)

description:
https://www.encodeproject.org/experiments/ENCSR904APY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR904APY
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB167VXE

value: anterior cingulate cortex

value: adult

value: unknown

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS424MMW at ENCODE; https://www.encodeproject.org/ENCBS424MMW/


title: snRNA-seq from left cerebral cortex (ENCLB570DFI)

description:
https://www.encodeproject.org/experiments/ENCSR118FCJ/
***************
biological replicate number: 2
technical replicate number: 3
description: Illumina short-read B6/Cast F1 cortex P14 male normal 12k
experiment encode accession: ENCSR118FCJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB570DFI

value: male

value: postnatal

value: Ali Mortazavi, UCI


title: DNase-seq from anterior cingulate cortex (ENCLB209DVR)

description:
https://www.encodeproject.org/experiments/ENCSR898IWL/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR898IWL
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB209DVR

source_name: Homo sapiens male adult anterior cingulate cortex tissue

value: ENCBS431OZL at ENCODE; https://www.encodeproject.org/ENCBS431OZL/


title: DNase-seq from hypothalamus (ENCLB956KOY)

description:
https://www.encodeproject.org/experiments/ENCSR897EQJ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR897EQJ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB956KOY

value: hypothalamus

value: tissue

value: female

value: ENCBS689PFN at ENCODE; https://www.encodeproject.org/ENCBS689PFN/


title: snRNA-seq from left cerebral cortex (ENCLB834MCB)

description:
https://www.encodeproject.org/experiments/ENCSR118FCJ/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 cortex P14 male normal 12k
experiment encode accession: ENCSR118FCJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB834MCB

value: left cerebral cortex

value: B6/Cast F1 cortex P14 male 2

value: 14 day

value: nucleus

value: The Jackson Laboratory


title: snRNA-seq from left cerebral cortex (ENCLB892PQW)

description:
https://www.encodeproject.org/experiments/ENCSR118FCJ/
***************
biological replicate number: 1
technical replicate number: 6
description: Illumina short-read B6/Cast F1 cortex P14 male normal 12k
experiment encode accession: ENCSR118FCJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB892PQW

value: B6/Cast F1 cortex P14 male 1

value: ENCBS819SOQ at ENCODE; https://www.encodeproject.org/ENCBS819SOQ/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from left cerebral cortex (ENCLB755ROJ)

description:
https://www.encodeproject.org/experiments/ENCSR118FCJ/
***************
biological replicate number: 2
technical replicate number: 5
description: Illumina short-read B6/Cast F1 cortex P14 male normal 12k
experiment encode accession: ENCSR118FCJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB755ROJ

value: ENCBS368BFZ at ENCODE; https://www.encodeproject.org/ENCBS368BFZ/


title: DNase-seq from caudate nucleus (ENCLB635DBY)

description:
https://www.encodeproject.org/experiments/ENCSR895LDY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR895LDY
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB635DBY

value: caudate nucleus

value: adult

value: unknown

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS086QCD at ENCODE; https://www.encodeproject.org/ENCBS086QCD/


title: DNase-seq from anterior cingulate cortex (ENCLB935EJI)

description:
https://www.encodeproject.org/experiments/ENCSR895HXW/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR895HXW
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB935EJI

value: anterior cingulate cortex

value: tissue

value: female

value: ENCBS511PVV at ENCODE; https://www.encodeproject.org/ENCBS511PVV/


title: DNase-seq from caudate nucleus (ENCLB712WFB)

description:
https://www.encodeproject.org/experiments/ENCSR891YFU/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR891YFU
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB712WFB

source_name: Homo sapiens male adult caudate nucleus tissue

value: male

value: ENCBS953GBD at ENCODE; https://www.encodeproject.org/ENCBS953GBD/


title: DNase-seq from amygdala (ENCLB343CRZ)

description:
https://www.encodeproject.org/experiments/ENCSR884QQY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR884QQY
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB343CRZ

source_name: Homo sapiens male adult amygdala tissue

value: amygdala

value: ENCBS837IJJ at ENCODE; https://www.encodeproject.org/ENCBS837IJJ/


title: snRNA-seq from left cerebral cortex (ENCLB258CYJ)

description:
https://www.encodeproject.org/experiments/ENCSR118FCJ/
***************
biological replicate number: 2
technical replicate number: 4
description: Illumina short-read B6/Cast F1 cortex P14 male normal 12k
experiment encode accession: ENCSR118FCJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB258CYJ

value: left cerebral cortex

value: B6/Cast F1 cortex P14 male 2

value: postnatal

value: 14 day

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory


title: DNase-seq from cerebellum (ENCLB629OBW)

description:
https://www.encodeproject.org/experiments/ENCSR883SFD/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR883SFD
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB629OBW

source_name: Homo sapiens female adult cerebellum tissue

value: cerebellum

value: adult

value: unknown

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS377MIM at ENCODE; https://www.encodeproject.org/ENCBS377MIM/


title: snRNA-seq from adrenal gland (ENCLB728LXG)

description:
https://www.encodeproject.org/experiments/ENCSR111SCI/
***************
biological replicate number: 2
technical replicate number: 3
description: Illumina short-read B6/Cast F1 adrenal P10 female normal 12k
experiment encode accession: ENCSR111SCI
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB728LXG

source_name: Mus musculus strain B6CASTF1/J female postnatal (10 days) adrenal gland tissue nuclear fraction

value: adrenal gland

value: tissue

value: B6/Cast F1 adrenal P10 female 2

value: female

value: 10 day

value: ENCBS204TIR at ENCODE; https://www.encodeproject.org/ENCBS204TIR/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: DNase-seq from dorsolateral prefrontal cortex (ENCLB914GVR)

description:
https://www.encodeproject.org/experiments/ENCSR880FFK/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR880FFK
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB914GVR

source_name: Homo sapiens male adult dorsolateral prefrontal cortex tissue

value: dorsolateral prefrontal cortex

value: male

value: ENCBS377UAZ at ENCODE; https://www.encodeproject.org/ENCBS377UAZ/


title: DNase-seq from anterior cingulate cortex (ENCLB000WJV)

description:
https://www.encodeproject.org/experiments/ENCSR872OJT/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR872OJT
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB000WJV

source_name: Homo sapiens female adult anterior cingulate cortex tissue

value: anterior cingulate cortex

value: ENCBS842WKX at ENCODE; https://www.encodeproject.org/ENCBS842WKX/


title: snRNA-seq from left cerebral cortex (ENCLB365ZLN)

description:
https://www.encodeproject.org/experiments/ENCSR118FCJ/
***************
biological replicate number: 2
technical replicate number: 6
description: Illumina short-read B6/Cast F1 cortex P14 male normal 12k
experiment encode accession: ENCSR118FCJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB365ZLN

value: left cerebral cortex

value: B6/Cast F1 cortex P14 male 2

value: postnatal

value: 14 day

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory

value: ENCBS368BFZ at ENCODE; https://www.encodeproject.org/ENCBS368BFZ/


title: snRNA-seq from left cerebral cortex (ENCLB455PAL)

description:
https://www.encodeproject.org/experiments/ENCSR118FCJ/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 cortex P14 male normal 12k
experiment encode accession: ENCSR118FCJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB455PAL

value: tissue

value: B6/Cast F1 cortex P14 male 1

value: ENCBS819SOQ at ENCODE; https://www.encodeproject.org/ENCBS819SOQ/


title: snRNA-seq from adrenal gland (ENCLB529MKV)

description:
https://www.encodeproject.org/experiments/ENCSR111SCI/
***************
biological replicate number: 2
technical replicate number: 5
description: Illumina short-read B6/Cast F1 adrenal P10 female normal 12k
experiment encode accession: ENCSR111SCI
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB529MKV

value: adrenal gland

value: B6/Cast F1 adrenal P10 female 2

value: female

value: 10 day

value: ENCBS204TIR at ENCODE; https://www.encodeproject.org/ENCBS204TIR/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from adrenal gland (ENCLB723AAQ)

description:
https://www.encodeproject.org/experiments/ENCSR111SCI/
***************
biological replicate number: 1
technical replicate number: 3
description: Illumina short-read B6/Cast F1 adrenal P10 female normal 12k
experiment encode accession: ENCSR111SCI
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB723AAQ

value: B6/Cast F1 adrenal P10 female 1

value: ENCBS789TOM at ENCODE; https://www.encodeproject.org/ENCBS789TOM/


title: DNase-seq from hypothalamus (ENCLB762KRI)

description:
https://www.encodeproject.org/experiments/ENCSR878UCC/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR878UCC
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB762KRI

value: hypothalamus

value: adult

value: unknown

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS254SVA at ENCODE; https://www.encodeproject.org/ENCBS254SVA/


title: snRNA-seq from adrenal gland (ENCLB622VMZ)

description:
https://www.encodeproject.org/experiments/ENCSR111SCI/
***************
biological replicate number: 1
technical replicate number: 2
description: Illumina short-read B6/Cast F1 adrenal P10 female normal 12k
experiment encode accession: ENCSR111SCI
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB622VMZ

value: tissue

value: postnatal

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory


title: snRNA-seq from adrenal gland (ENCLB089NEV)

description:
https://www.encodeproject.org/experiments/ENCSR111SCI/
***************
biological replicate number: 1
technical replicate number: 4
description: Illumina short-read B6/Cast F1 adrenal P10 female normal 12k
experiment encode accession: ENCSR111SCI
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB089NEV

value: adrenal gland

value: female


title: DNase-seq from caudate nucleus (ENCLB918XQV)

description:
https://www.encodeproject.org/experiments/ENCSR880DGB/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR880DGB
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB918XQV

value: caudate nucleus

value: ENCBS360MXX at ENCODE; https://www.encodeproject.org/ENCBS360MXX/


title: DNase-seq from hypothalamus (ENCLB990UGE)

description:
https://www.encodeproject.org/experiments/ENCSR872HRU/
***************
biological replicate number: 3
technical replicate number: 1
description:
experiment encode accession: ENCSR872HRU
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB990UGE

source_name: Homo sapiens male adult hypothalamus tissue

value: male

value: ENCBS598RPR at ENCODE; https://www.encodeproject.org/ENCBS598RPR/


title: snRNA-seq from adrenal gland (ENCLB612GEP)

description:
https://www.encodeproject.org/experiments/ENCSR111SCI/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 adrenal P10 female normal 12k
experiment encode accession: ENCSR111SCI
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB612GEP

value: B6/Cast F1 adrenal P10 female 2

value: 10 day

value: ENCBS204TIR at ENCODE; https://www.encodeproject.org/ENCBS204TIR/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from adrenal gland (ENCLB366QTP)

description:
https://www.encodeproject.org/experiments/ENCSR111SCI/
***************
biological replicate number: 2
technical replicate number: 2
description: Illumina short-read B6/Cast F1 adrenal P10 female normal 12k
experiment encode accession: ENCSR111SCI
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB366QTP


title: DNase-seq from hypothalamus (ENCLB986VYM)

description:
https://www.encodeproject.org/experiments/ENCSR872HRU/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR872HRU
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB986VYM

value: hypothalamus

value: adult

value: unknown

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS388PHU at ENCODE; https://www.encodeproject.org/ENCBS388PHU/


title: snRNA-seq from adrenal gland (ENCLB279QLV)

description:
https://www.encodeproject.org/experiments/ENCSR111SCI/
***************
biological replicate number: 1
technical replicate number: 6
description: Illumina short-read B6/Cast F1 adrenal P10 female normal 12k
experiment encode accession: ENCSR111SCI
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB279QLV

value: tissue

value: B6/Cast F1 adrenal P10 female 1

value: postnatal

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory

value: ENCBS789TOM at ENCODE; https://www.encodeproject.org/ENCBS789TOM/


title: DNase-seq from anterior cingulate cortex (ENCLB693IAB)

description:
https://www.encodeproject.org/experiments/ENCSR868ZXQ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR868ZXQ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB693IAB

value: anterior cingulate cortex

value: female

value: ENCBS154PRU at ENCODE; https://www.encodeproject.org/ENCBS154PRU/


title: snRNA-seq from adrenal gland (ENCLB984VLS)

description:
https://www.encodeproject.org/experiments/ENCSR111SCI/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 adrenal P10 female normal 12k
experiment encode accession: ENCSR111SCI
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB984VLS

value: adrenal gland

value: 10 day

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: DNase-seq from anterior cingulate cortex (ENCLB496BNW)

description:
https://www.encodeproject.org/experiments/ENCSR870FVK/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR870FVK
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB496BNW

value: adult

value: unknown

value: ENCBS523GEN at ENCODE; https://www.encodeproject.org/ENCBS523GEN/


title: DNase-seq from substantia nigra (ENCLB531OEZ)

description:
https://www.encodeproject.org/experiments/ENCSR865YJP/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR865YJP
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB531OEZ

source_name: Homo sapiens male adult substantia nigra tissue

value: substantia nigra

value: male

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS200BZA at ENCODE; https://www.encodeproject.org/ENCBS200BZA/


title: DNase-seq from putamen (ENCLB399ZAZ)

description:
https://www.encodeproject.org/experiments/ENCSR869YMF/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR869YMF
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB399ZAZ

value: putamen

value: tissue

value: ENCBS607CRZ at ENCODE; https://www.encodeproject.org/ENCBS607CRZ/


title: snRNA-seq from adrenal gland (ENCLB614OIT)

description:
https://www.encodeproject.org/experiments/ENCSR108ZIJ/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 adrenal P36 male normal 12k
experiment encode accession: ENCSR108ZIJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB614OIT

source_name: Mus musculus strain B6CASTF1/J male postnatal (36 days) adrenal gland tissue nuclear fraction

value: B6/Cast F1 adrenal P36 male 2

value: postnatal

value: 36 day

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory

value: ENCBS815NZI at ENCODE; https://www.encodeproject.org/ENCBS815NZI/


title: snRNA-seq from adrenal gland (ENCLB364QKF)

description:
https://www.encodeproject.org/experiments/ENCSR111SCI/
***************
biological replicate number: 2
technical replicate number: 6
description: Illumina short-read B6/Cast F1 adrenal P10 female normal 12k
experiment encode accession: ENCSR111SCI
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB364QKF

value: adrenal gland

value: B6/Cast F1 adrenal P10 female 2

value: female

value: 10 day

value: ENCBS204TIR at ENCODE; https://www.encodeproject.org/ENCBS204TIR/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: DNase-seq from C1 segment of cervical spinal cord (ENCLB627SLY)

description:
https://www.encodeproject.org/experiments/ENCSR864BXZ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR864BXZ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB627SLY

source_name: Homo sapiens female adult C1 segment of cervical spinal cord tissue

value: C1 segment of cervical spinal cord

value: adult

value: unknown

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS993UQP at ENCODE; https://www.encodeproject.org/ENCBS993UQP/


title: snRNA-seq from adrenal gland (ENCLB070HDN)

description:
https://www.encodeproject.org/experiments/ENCSR108ZIJ/
***************
biological replicate number: 1
technical replicate number: 2
description: Illumina short-read B6/Cast F1 adrenal P36 male normal 12k
experiment encode accession: ENCSR108ZIJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB070HDN

value: tissue

value: B6/Cast F1 adrenal P36 male 1

value: male

value: postnatal

value: 36 day

value: ENCBS254HFK at ENCODE; https://www.encodeproject.org/ENCBS254HFK/


title: snRNA-seq from adrenal gland (ENCLB073BOU)

description:
https://www.encodeproject.org/experiments/ENCSR108ZIJ/
***************
biological replicate number: 1
technical replicate number: 4
description: Illumina short-read B6/Cast F1 adrenal P36 male normal 12k
experiment encode accession: ENCSR108ZIJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB073BOU

value: adrenal gland

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory


title: snRNA-seq from adrenal gland (ENCLB195ZTW)

description:
https://www.encodeproject.org/experiments/ENCSR108ZIJ/
***************
biological replicate number: 1
technical replicate number: 6
description: Illumina short-read B6/Cast F1 adrenal P36 male normal 12k
experiment encode accession: ENCSR108ZIJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB195ZTW

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: DNase-seq from putamen (ENCLB938MKP)

description:
https://www.encodeproject.org/experiments/ENCSR860FLB/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR860FLB
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB938MKP

source_name: Homo sapiens male adult putamen tissue

value: putamen

value: ENCBS548OKQ at ENCODE; https://www.encodeproject.org/ENCBS548OKQ/


title: DNase-seq from Ammon's horn (ENCLB787UAL)

description:
https://www.encodeproject.org/experiments/ENCSR861HOD/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR861HOD
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB787UAL

value: Ammon's horn

value: female

value: adult

value: unknown

value: ENCBS514WKE at ENCODE; https://www.encodeproject.org/ENCBS514WKE/


title: snRNA-seq from adrenal gland (ENCLB737LHM)

description:
https://www.encodeproject.org/experiments/ENCSR111SCI/
***************
biological replicate number: 1
technical replicate number: 5
description: Illumina short-read B6/Cast F1 adrenal P10 female normal 12k
experiment encode accession: ENCSR111SCI
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB737LHM

value: tissue

value: B6/Cast F1 adrenal P10 female 1

value: 10 day

value: ENCBS789TOM at ENCODE; https://www.encodeproject.org/ENCBS789TOM/


title: snRNA-seq from adrenal gland (ENCLB191VNP)

description:
https://www.encodeproject.org/experiments/ENCSR111SCI/
***************
biological replicate number: 2
technical replicate number: 4
description: Illumina short-read B6/Cast F1 adrenal P10 female normal 12k
experiment encode accession: ENCSR111SCI
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB191VNP

value: B6/Cast F1 adrenal P10 female 2

value: postnatal

value: ENCBS204TIR at ENCODE; https://www.encodeproject.org/ENCBS204TIR/


title: DNase-seq from cerebellum (ENCLB600OUH)

description:
https://www.encodeproject.org/experiments/ENCSR857IYQ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR857IYQ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB600OUH

source_name: Homo sapiens male adult cerebellum tissue

value: cerebellum

value: male

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS734ZIV at ENCODE; https://www.encodeproject.org/ENCBS734ZIV/


title: snRNA-seq from adrenal gland (ENCLB028UPL)

description:
https://www.encodeproject.org/experiments/ENCSR108ZIJ/
***************
biological replicate number: 2
technical replicate number: 5
description: Illumina short-read B6/Cast F1 adrenal P36 male normal 12k
experiment encode accession: ENCSR108ZIJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB028UPL

value: adrenal gland

value: B6/Cast F1 adrenal P36 male 2

value: 36 day

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory

value: ENCBS815NZI at ENCODE; https://www.encodeproject.org/ENCBS815NZI/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: DNase-seq from substantia nigra (ENCLB224TVB)

description:
https://www.encodeproject.org/experiments/ENCSR870YMP/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR870YMP
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB224TVB

source_name: Homo sapiens female adult substantia nigra tissue

value: substantia nigra

value: tissue

value: female

value: adult

value: unknown

value: ENCBS766IMW at ENCODE; https://www.encodeproject.org/ENCBS766IMW/


title: snRNA-seq from adrenal gland (ENCLB893NNQ)

description:
https://www.encodeproject.org/experiments/ENCSR108ZIJ/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 adrenal P36 male normal 12k
experiment encode accession: ENCSR108ZIJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB893NNQ

value: B6/Cast F1 adrenal P36 male 1

value: male

value: postnatal

value: ENCBS254HFK at ENCODE; https://www.encodeproject.org/ENCBS254HFK/


title: snRNA-seq from adrenal gland (ENCLB570QFV)

description:
https://www.encodeproject.org/experiments/ENCSR108ZIJ/
***************
biological replicate number: 1
technical replicate number: 5
description: Illumina short-read B6/Cast F1 adrenal P36 male normal 12k
experiment encode accession: ENCSR108ZIJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB570QFV

value: adrenal gland


title: DNase-seq from putamen (ENCLB863VGL)

description:
https://www.encodeproject.org/experiments/ENCSR856ZNO/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR856ZNO
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB863VGL

source_name: Homo sapiens female adult putamen tissue

value: putamen

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS834THK at ENCODE; https://www.encodeproject.org/ENCBS834THK/


title: DNase-seq from dorsolateral prefrontal cortex (ENCLB426NMA)

description:
https://www.encodeproject.org/experiments/ENCSR855LVD/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR855LVD
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB426NMA

source_name: Homo sapiens female adult dorsolateral prefrontal cortex tissue

value: dorsolateral prefrontal cortex

value: ENCBS914EXI at ENCODE; https://www.encodeproject.org/ENCBS914EXI/


title: DNase-seq from amygdala (ENCLB626WBM)

description:
https://www.encodeproject.org/experiments/ENCSR854XDD/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR854XDD
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB626WBM

value: amygdala

value: ENCBS271JZH at ENCODE; https://www.encodeproject.org/ENCBS271JZH/


title: snRNA-seq from adrenal gland (ENCLB250NVP)

description:
https://www.encodeproject.org/experiments/ENCSR108ZIJ/
***************
biological replicate number: 2
technical replicate number: 4
description: Illumina short-read B6/Cast F1 adrenal P36 male normal 12k
experiment encode accession: ENCSR108ZIJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB250NVP

value: tissue

value: B6/Cast F1 adrenal P36 male 2

value: 36 day

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory

value: ENCBS815NZI at ENCODE; https://www.encodeproject.org/ENCBS815NZI/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: DNase-seq from amygdala (ENCLB043WMP)

description:
https://www.encodeproject.org/experiments/ENCSR854XDD/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR854XDD
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB043WMP

value: male

value: adult

value: unknown

value: ENCBS588AGO at ENCODE; https://www.encodeproject.org/ENCBS588AGO/


title: snRNA-seq from adrenal gland (ENCLB138WTF)

description:
https://www.encodeproject.org/experiments/ENCSR108ZIJ/
***************
biological replicate number: 2
technical replicate number: 6
description: Illumina short-read B6/Cast F1 adrenal P36 male normal 12k
experiment encode accession: ENCSR108ZIJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB138WTF

value: adrenal gland

value: postnatal


title: DNase-seq from amygdala (ENCLB247HXP)

description:
https://www.encodeproject.org/experiments/ENCSR854XDD/
***************
biological replicate number: 3
technical replicate number: 1
description:
experiment encode accession: ENCSR854XDD
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB247HXP

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS470COV at ENCODE; https://www.encodeproject.org/ENCBS470COV/


title: snRNA-seq from adrenal gland (ENCLB924HOE)

description:
https://www.encodeproject.org/experiments/ENCSR108ZIJ/
***************
biological replicate number: 2
technical replicate number: 2
description: Illumina short-read B6/Cast F1 adrenal P36 male normal 12k
experiment encode accession: ENCSR108ZIJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB924HOE

value: tissue


title: DNase-seq from C1 segment of cervical spinal cord (ENCLB258JUS)

description:
https://www.encodeproject.org/experiments/ENCSR864BXZ/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR864BXZ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB258JUS

value: C1 segment of cervical spinal cord

value: female

value: ENCBS437ZRA at ENCODE; https://www.encodeproject.org/ENCBS437ZRA/


title: DNase-seq from nucleus accumbens (ENCLB777ETL)

description:
https://www.encodeproject.org/experiments/ENCSR850CID/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR850CID
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB777ETL

source_name: Homo sapiens male adult nucleus accumbens tissue

value: nucleus accumbens

value: ENCBS367DRH at ENCODE; https://www.encodeproject.org/ENCBS367DRH/


title: snRNA-seq from adrenal gland (ENCLB087NZB)

description:
https://www.encodeproject.org/experiments/ENCSR108ZIJ/
***************
biological replicate number: 1
technical replicate number: 3
description: Illumina short-read B6/Cast F1 adrenal P36 male normal 12k
experiment encode accession: ENCSR108ZIJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB087NZB

value: B6/Cast F1 adrenal P36 male 1

value: 36 day

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory

value: ENCBS254HFK at ENCODE; https://www.encodeproject.org/ENCBS254HFK/


title: DNase-seq from Ammon's horn (ENCLB364VOL)

description:
https://www.encodeproject.org/experiments/ENCSR850BMG/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR850BMG
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB364VOL

source_name: Homo sapiens female adult Ammon's horn tissue

value: Ammon's horn

value: adult

value: unknown

value: ENCBS489WXS at ENCODE; https://www.encodeproject.org/ENCBS489WXS/


title: snRNA-seq from adrenal gland (ENCLB122SMO)

description:
https://www.encodeproject.org/experiments/ENCSR108ZIJ/
***************
biological replicate number: 2
technical replicate number: 3
description: Illumina short-read B6/Cast F1 adrenal P36 male normal 12k
experiment encode accession: ENCSR108ZIJ
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB122SMO

value: adrenal gland

value: B6/Cast F1 adrenal P36 male 2

value: male

value: postnatal

value: ENCBS815NZI at ENCODE; https://www.encodeproject.org/ENCBS815NZI/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from adrenal gland (ENCLB906FKB)

description:
https://www.encodeproject.org/experiments/ENCSR097PDV/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 adrenal P2mo female normal 12k
experiment encode accession: ENCSR097PDV
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB906FKB

source_name: Mus musculus strain B6CASTF1/J female adult (2 months) adrenal gland tissue nuclear fraction

value: tissue

value: B6/Cast F1 adrenal P2mo female 2

value: female

value: 2 month

value: ENCBS266BTE at ENCODE; https://www.encodeproject.org/ENCBS266BTE/


title: DNase-seq from caudate nucleus (ENCLB428RGK)

description:
https://www.encodeproject.org/experiments/ENCSR848LNH/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR848LNH
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB428RGK

source_name: Homo sapiens female adult caudate nucleus tissue

value: caudate nucleus

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS890ZBH at ENCODE; https://www.encodeproject.org/ENCBS890ZBH/


title: DNase-seq from hypothalamus (ENCLB055XTB)

description:
https://www.encodeproject.org/experiments/ENCSR849IAY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR849IAY
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB055XTB

value: hypothalamus

value: adult

value: unknown

value: ENCBS625RJK at ENCODE; https://www.encodeproject.org/ENCBS625RJK/


title: snRNA-seq from adrenal gland (ENCLB031LFV)

description:
https://www.encodeproject.org/experiments/ENCSR097PDV/
***************
biological replicate number: 1
technical replicate number: 4
description: Illumina short-read B6/Cast F1 adrenal P2mo female normal 12k
experiment encode accession: ENCSR097PDV
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB031LFV

value: adrenal gland

value: B6/Cast F1 adrenal P2mo female 1

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory

value: ENCBS194GJK at ENCODE; https://www.encodeproject.org/ENCBS194GJK/


title: DNase-seq from caudate nucleus (ENCLB901HJX)

description:
https://www.encodeproject.org/experiments/ENCSR846VDO/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR846VDO
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB901HJX

source_name: Homo sapiens male adult caudate nucleus tissue

value: tissue

value: male

value: ENCBS178VRZ at ENCODE; https://www.encodeproject.org/ENCBS178VRZ/


title: snRNA-seq from adrenal gland (ENCLB651SCV)

description:
https://www.encodeproject.org/experiments/ENCSR097PDV/
***************
biological replicate number: 1
technical replicate number: 5
description: Illumina short-read B6/Cast F1 adrenal P2mo female normal 12k
experiment encode accession: ENCSR097PDV
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB651SCV

value: female

value: 2 month

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: DNase-seq from putamen (ENCLB045FSX)

description:
https://www.encodeproject.org/experiments/ENCSR846QAF/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR846QAF
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB045FSX

value: putamen

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS348KDD at ENCODE; https://www.encodeproject.org/ENCBS348KDD/


title: snRNA-seq from adrenal gland (ENCLB764MSD)

description:
https://www.encodeproject.org/experiments/ENCSR097PDV/
***************
biological replicate number: 2
technical replicate number: 4
description: Illumina short-read B6/Cast F1 adrenal P2mo female normal 12k
experiment encode accession: ENCSR097PDV
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB764MSD

value: B6/Cast F1 adrenal P2mo female 2

value: adult

value: ENCBS266BTE at ENCODE; https://www.encodeproject.org/ENCBS266BTE/


title: snRNA-seq from adrenal gland (ENCLB713WSU)

description:
https://www.encodeproject.org/experiments/ENCSR097PDV/
***************
biological replicate number: 1
technical replicate number: 6
description: Illumina short-read B6/Cast F1 adrenal P2mo female normal 12k
experiment encode accession: ENCSR097PDV
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB713WSU

value: adrenal gland

value: B6/Cast F1 adrenal P2mo female 1

value: Ali Mortazavi, UCI


title: snRNA-seq from adrenal gland (ENCLB163FPQ)

description:
https://www.encodeproject.org/experiments/ENCSR097PDV/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 adrenal P2mo female normal 12k
experiment encode accession: ENCSR097PDV
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB163FPQ

value: nucleus

value: The Jackson Laboratory

value: ENCBS194GJK at ENCODE; https://www.encodeproject.org/ENCBS194GJK/


title: DNase-seq from nucleus accumbens (ENCLB202CHF)

description:
https://www.encodeproject.org/experiments/ENCSR844XQO/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR844XQO
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB202CHF

value: nucleus accumbens

value: tissue

value: male

value: unknown

value: ENCBS573GTF at ENCODE; https://www.encodeproject.org/ENCBS573GTF/


title: snRNA-seq from adrenal gland (ENCLB587BSM)

description:
https://www.encodeproject.org/experiments/ENCSR097PDV/
***************
biological replicate number: 2
technical replicate number: 5
description: Illumina short-read B6/Cast F1 adrenal P2mo female normal 12k
experiment encode accession: ENCSR097PDV
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB587BSM

value: female

value: 2 month

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from adrenal gland (ENCLB104HYR)

description:
https://www.encodeproject.org/experiments/ENCSR097PDV/
***************
biological replicate number: 1
technical replicate number: 2
description: Illumina short-read B6/Cast F1 adrenal P2mo female normal 12k
experiment encode accession: ENCSR097PDV
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB104HYR


title: snRNA-seq from adrenal gland (ENCLB708WAM)

description:
https://www.encodeproject.org/experiments/ENCSR097PDV/
***************
biological replicate number: 2
technical replicate number: 6
description: Illumina short-read B6/Cast F1 adrenal P2mo female normal 12k
experiment encode accession: ENCSR097PDV
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB708WAM

value: B6/Cast F1 adrenal P2mo female 2


title: DNase-seq from nucleus accumbens (ENCLB743WVE)

description:
https://www.encodeproject.org/experiments/ENCSR844XQO/
***************
biological replicate number: 3
technical replicate number: 1
description:
experiment encode accession: ENCSR844XQO
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB743WVE

value: adult

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS007MAO at ENCODE; https://www.encodeproject.org/ENCBS007MAO/


title: DNase-seq from putamen (ENCLB555EIF)

description:
https://www.encodeproject.org/experiments/ENCSR846NLY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR846NLY
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB555EIF

value: putamen

value: ENCBS730JLW at ENCODE; https://www.encodeproject.org/ENCBS730JLW/


title: snRNA-seq from adrenal gland (ENCLB869KHJ)

description:
https://www.encodeproject.org/experiments/ENCSR097PDV/
***************
biological replicate number: 1
technical replicate number: 3
description: Illumina short-read B6/Cast F1 adrenal P2mo female normal 12k
experiment encode accession: ENCSR097PDV
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB869KHJ

value: adrenal gland

value: B6/Cast F1 adrenal P2mo female 1

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory


title: DNase-seq from hypothalamus (ENCLB981OTJ)

description:
https://www.encodeproject.org/experiments/ENCSR872HRU/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR872HRU
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB981OTJ

value: hypothalamus

value: tissue

value: male

value: unknown

value: ENCBS703SGU at ENCODE; https://www.encodeproject.org/ENCBS703SGU/


title: DNase-seq from nucleus accumbens (ENCLB823VKK)

description:
https://www.encodeproject.org/experiments/ENCSR844XQO/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR844XQO
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB823VKK

value: nucleus accumbens

value: ENCBS859WJL at ENCODE; https://www.encodeproject.org/ENCBS859WJL/


title: snRNA-seq from adrenal gland (ENCLB602PKF)

description:
https://www.encodeproject.org/experiments/ENCSR097PDV/
***************
biological replicate number: 2
technical replicate number: 3
description: Illumina short-read B6/Cast F1 adrenal P2mo female normal 12k
experiment encode accession: ENCSR097PDV
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB602PKF

value: B6/Cast F1 adrenal P2mo female 2

value: female

value: adult

value: 2 month

value: ENCBS266BTE at ENCODE; https://www.encodeproject.org/ENCBS266BTE/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from adrenal gland (ENCLB438YGP)

description:
https://www.encodeproject.org/experiments/ENCSR097PDV/
***************
biological replicate number: 2
technical replicate number: 2
description: Illumina short-read B6/Cast F1 adrenal P2mo female normal 12k
experiment encode accession: ENCSR097PDV
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB438YGP

value: adrenal gland


title: DNase-seq from hypothalamus (ENCLB080QDP)

description:
https://www.encodeproject.org/experiments/ENCSR844ANY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR844ANY
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB080QDP

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS270QUV at ENCODE; https://www.encodeproject.org/ENCBS270QUV/


title: DNase-seq from anterior cingulate cortex (ENCLB337DAS)

description:
https://www.encodeproject.org/experiments/ENCSR835OQW/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR835OQW
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB337DAS

value: anterior cingulate cortex

value: ENCBS411MJU at ENCODE; https://www.encodeproject.org/ENCBS411MJU/


title: DNase-seq from substantia nigra (ENCLB870GWN)

description:
https://www.encodeproject.org/experiments/ENCSR834HPX/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR834HPX
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB870GWN

value: substantia nigra

value: tissue

value: ENCBS516PIE at ENCODE; https://www.encodeproject.org/ENCBS516PIE/


title: snRNA-seq from gastrocnemius (ENCLB225LKT)

description:
https://www.encodeproject.org/experiments/ENCSR094YHS/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 gastrocnemius P14 female normal 2k
experiment encode accession: ENCSR094YHS
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB225LKT
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

source_name: Mus musculus strain B6CASTF1/J female postnatal (14 days) gastrocnemius tissue nuclear fraction

value: gastrocnemius

value: B6/Cast F1 gastrocnemius P14 female 1

value: postnatal

value: 14 day

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory

value: ENCBS510QAA at ENCODE; https://www.encodeproject.org/ENCBS510QAA/


title: DNase-seq from cerebellum (ENCLB724VVF)

description:
https://www.encodeproject.org/experiments/ENCSR838MVE/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR838MVE
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB724VVF

value: cerebellum

value: male

value: adult

value: unknown

value: ENCBS721GLD at ENCODE; https://www.encodeproject.org/ENCBS721GLD/


title: DNase-seq from substantia nigra (ENCLB939LJM)

description:
https://www.encodeproject.org/experiments/ENCSR834HPX/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR834HPX
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB939LJM

value: female

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS772WAN at ENCODE; https://www.encodeproject.org/ENCBS772WAN/


title: snRNA-seq from adrenal gland (ENCLB469KQZ)

description:
https://www.encodeproject.org/experiments/ENCSR093CLX/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 adrenal P14 female ont_match 2k
experiment encode accession: ENCSR093CLX
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB469KQZ
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

source_name: Mus musculus strain B6CASTF1/J female postnatal (14 days) adrenal gland tissue nuclear fraction

value: adrenal gland

value: tissue

value: B6/Cast F1 adrenal P14 female 1

value: ENCBS829KDQ at ENCODE; https://www.encodeproject.org/ENCBS829KDQ/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from gastrocnemius (ENCLB249QAX)

description:
https://www.encodeproject.org/experiments/ENCSR094YHS/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 gastrocnemius P14 female normal 2k
experiment encode accession: ENCSR094YHS
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB249QAX
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

value: gastrocnemius

value: B6/Cast F1 gastrocnemius P14 female 2

value: postnatal

value: 14 day

value: Ali Mortazavi, UCI

value: nucleus

value: ENCBS963ZVP at ENCODE; https://www.encodeproject.org/ENCBS963ZVP/


title: DNase-seq from anterior cingulate cortex (ENCLB813KOQ)

description:
https://www.encodeproject.org/experiments/ENCSR830UKQ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR830UKQ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB813KOQ

source_name: Homo sapiens male adult anterior cingulate cortex tissue

value: anterior cingulate cortex

value: male

value: adult

value: unknown

value: ENCBS580UVV at ENCODE; https://www.encodeproject.org/ENCBS580UVV/


title: snRNA-seq from adrenal gland (ENCLB765SCG)

description:
https://www.encodeproject.org/experiments/ENCSR093CLX/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 adrenal P14 female ont_match 2k
experiment encode accession: ENCSR093CLX
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB765SCG
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

value: adrenal gland

value: B6/Cast F1 adrenal P14 female 2

value: female

value: The Jackson Laboratory

value: ENCBS608STD at ENCODE; https://www.encodeproject.org/ENCBS608STD/


title: DNase-seq from nucleus accumbens (ENCLB302BFC)

description:
https://www.encodeproject.org/experiments/ENCSR833RZM/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR833RZM
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB302BFC

source_name: Homo sapiens female adult nucleus accumbens tissue

value: nucleus accumbens

value: tissue

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS077HXH at ENCODE; https://www.encodeproject.org/ENCBS077HXH/


title: DNase-seq from anterior cingulate cortex (ENCLB314KLH)

description:
https://www.encodeproject.org/experiments/ENCSR830UKQ/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR830UKQ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB314KLH

value: ENCBS609BAD at ENCODE; https://www.encodeproject.org/ENCBS609BAD/


title: snRNA-seq from left cerebral cortex (ENCLB311ZJJ)

description:
https://www.encodeproject.org/experiments/ENCSR092RYV/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 cortex P18-20mo female normal 2k
experiment encode accession: ENCSR092RYV
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB311ZJJ
nucleic acid starting quantity: 42
nucleic acid starting quantity units: cells

source_name: Mus musculus strain B6CASTF1/J female adult (18-20 months) left cerebral cortex tissue nuclear fraction

value: left cerebral cortex

value: B6/Cast F1 cortex P18-20mo female 1

value: 18-20 month

value: Ali Mortazavi, UCI

value: nucleus

value: ENCBS136GTT at ENCODE; https://www.encodeproject.org/ENCBS136GTT/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: DNase-seq from cerebellum (ENCLB901YSI)

description:
https://www.encodeproject.org/experiments/ENCSR821TKQ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR821TKQ
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB901YSI

value: cerebellum

value: male

value: adult

value: unknown

value: ENCBS674RUD at ENCODE; https://www.encodeproject.org/ENCBS674RUD/


title: snRNA-seq from left cerebral cortex (ENCLB904QGH)

description:
https://www.encodeproject.org/experiments/ENCSR084RQP/
***************
biological replicate number: 2
technical replicate number: 4
description: Illumina short-read B6/Cast F1 cortex P14 female normal 12k
experiment encode accession: ENCSR084RQP
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB904QGH

source_name: Mus musculus strain B6CASTF1/J female postnatal (14 days) left cerebral cortex tissue nuclear fraction

value: tissue

value: B6/Cast F1 cortex P14 female 2

value: female

value: postnatal

value: 14 day

value: The Jackson Laboratory

value: ENCBS837RGL at ENCODE; https://www.encodeproject.org/ENCBS837RGL/


title: DNase-seq from cerebellum (ENCLB343OWE)

description:
https://www.encodeproject.org/experiments/ENCSR828JEX/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR828JEX
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB343OWE

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS053WQO at ENCODE; https://www.encodeproject.org/ENCBS053WQO/


title: snRNA-seq from left cerebral cortex (ENCLB920FTQ)

description:
https://www.encodeproject.org/experiments/ENCSR092RYV/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 cortex P18-20mo female normal 2k
experiment encode accession: ENCSR092RYV
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB920FTQ
nucleic acid starting quantity: 42
nucleic acid starting quantity units: cells

value: left cerebral cortex

value: B6/Cast F1 cortex P18-20mo female 2

value: 18-20 month

value: Ali Mortazavi, UCI

value: nucleus

value: ENCBS527NEL at ENCODE; https://www.encodeproject.org/ENCBS527NEL/


title: DNase-seq from caudate nucleus (ENCLB551CGN)

description:
https://www.encodeproject.org/experiments/ENCSR817GTB/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR817GTB
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB551CGN

value: caudate nucleus

value: male

value: adult

value: unknown

value: ENCBS257XTD at ENCODE; https://www.encodeproject.org/ENCBS257XTD/


title: DNase-seq from C1 segment of cervical spinal cord (ENCLB745TOY)

description:
https://www.encodeproject.org/experiments/ENCSR842BYR/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR842BYR
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB745TOY

source_name: Homo sapiens female adult C1 segment of cervical spinal cord tissue

value: C1 segment of cervical spinal cord

value: tissue

value: female

value: ENCBS609PVG at ENCODE; https://www.encodeproject.org/ENCBS609PVG/


title: snRNA-seq from left cerebral cortex (ENCLB281VBR)

description:
https://www.encodeproject.org/experiments/ENCSR084RQP/
***************
biological replicate number: 1
technical replicate number: 5
description: Illumina short-read B6/Cast F1 cortex P14 female normal 12k
experiment encode accession: ENCSR084RQP
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB281VBR

value: B6/Cast F1 cortex P14 female 1

value: postnatal

value: 14 day

value: The Jackson Laboratory

value: ENCBS543UZZ at ENCODE; https://www.encodeproject.org/ENCBS543UZZ/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: DNase-seq from substantia nigra (ENCLB295CIJ)

description:
https://www.encodeproject.org/experiments/ENCSR821KTM/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR821KTM
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB295CIJ

source_name: Homo sapiens male adult substantia nigra tissue

value: substantia nigra

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS796FBL at ENCODE; https://www.encodeproject.org/ENCBS796FBL/


title: snRNA-seq from left cerebral cortex (ENCLB952NZL)

description:
https://www.encodeproject.org/experiments/ENCSR084RQP/
***************
biological replicate number: 2
technical replicate number: 5
description: Illumina short-read B6/Cast F1 cortex P14 female normal 12k
experiment encode accession: ENCSR084RQP
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB952NZL

value: left cerebral cortex

value: B6/Cast F1 cortex P14 female 2

value: Ali Mortazavi, UCI

value: nucleus

value: ENCBS837RGL at ENCODE; https://www.encodeproject.org/ENCBS837RGL/


title: DNase-seq from nucleus accumbens (ENCLB126WGD)

description:
https://www.encodeproject.org/experiments/ENCSR817EUV/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR817EUV
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB126WGD

value: nucleus accumbens

value: tissue

value: female

value: adult

value: unknown

value: ENCBS580VSV at ENCODE; https://www.encodeproject.org/ENCBS580VSV/


title: DNase-seq from caudate nucleus (ENCLB029IGM)

description:
https://www.encodeproject.org/experiments/ENCSR816UJX/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR816UJX
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB029IGM

value: caudate nucleus

value: male

value: ENCBS197UAJ at ENCODE; https://www.encodeproject.org/ENCBS197UAJ/


title: DNase-seq from caudate nucleus (ENCLB712KVB)

description:
https://www.encodeproject.org/experiments/ENCSR812OQB/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR812OQB
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB712KVB

value: John Stamatoyannopoulos, UW

value: ENCBS651OJF at ENCODE; https://www.encodeproject.org/ENCBS651OJF/


title: DNase-seq from anterior cingulate cortex (ENCLB322EWK)

description:
https://www.encodeproject.org/experiments/ENCSR811HRV/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR811HRV
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB322EWK

source_name: Homo sapiens female adult anterior cingulate cortex tissue

value: anterior cingulate cortex

value: Kristin Ardlie

value: ENCBS682FKH at ENCODE; https://www.encodeproject.org/ENCBS682FKH/


title: snRNA-seq from left cerebral cortex (ENCLB399MEO)

description:
https://www.encodeproject.org/experiments/ENCSR084RQP/
***************
biological replicate number: 1
technical replicate number: 2
description: Illumina short-read B6/Cast F1 cortex P14 female normal 12k
experiment encode accession: ENCSR084RQP
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB399MEO

value: left cerebral cortex

value: B6/Cast F1 cortex P14 female 1

value: postnatal

value: 14 day

value: Ali Mortazavi, UCI

value: The Jackson Laboratory

value: ENCBS543UZZ at ENCODE; https://www.encodeproject.org/ENCBS543UZZ/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from left cerebral cortex (ENCLB328BQT)

description:
https://www.encodeproject.org/experiments/ENCSR084RQP/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 cortex P14 female normal 12k
experiment encode accession: ENCSR084RQP
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB328BQT

value: tissue

value: female

value: nucleus


title: snRNA-seq from left cerebral cortex (ENCLB663CRI)

description:
https://www.encodeproject.org/experiments/ENCSR084RQP/
***************
biological replicate number: 1
technical replicate number: 3
description: Illumina short-read B6/Cast F1 cortex P14 female normal 12k
experiment encode accession: ENCSR084RQP
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB663CRI


title: snRNA-seq from left cerebral cortex (ENCLB976KVP)

description:
https://www.encodeproject.org/experiments/ENCSR084RQP/
***************
biological replicate number: 2
technical replicate number: 6
description: Illumina short-read B6/Cast F1 cortex P14 female normal 12k
experiment encode accession: ENCSR084RQP
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB976KVP

value: B6/Cast F1 cortex P14 female 2

value: ENCBS837RGL at ENCODE; https://www.encodeproject.org/ENCBS837RGL/


title: snRNA-seq from left cerebral cortex (ENCLB031XDH)

description:
https://www.encodeproject.org/experiments/ENCSR084RQP/
***************
biological replicate number: 2
technical replicate number: 3
description: Illumina short-read B6/Cast F1 cortex P14 female normal 12k
experiment encode accession: ENCSR084RQP
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB031XDH


title: snRNA-seq from left cerebral cortex (ENCLB998MKW)

description:
https://www.encodeproject.org/experiments/ENCSR084RQP/
***************
biological replicate number: 1
technical replicate number: 4
description: Illumina short-read B6/Cast F1 cortex P14 female normal 12k
experiment encode accession: ENCSR084RQP
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB998MKW


title: DNase-seq from amygdala (ENCLB922UVX)

description:
https://www.encodeproject.org/experiments/ENCSR809VUP/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR809VUP
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB922UVX

source_name: Homo sapiens male adult amygdala tissue

value: amygdala

value: male

value: adult

value: unknown

value: John Stamatoyannopoulos, UW

value: ENCBS862NMH at ENCODE; https://www.encodeproject.org/ENCBS862NMH/


title: DNase-seq from dorsolateral prefrontal cortex (ENCLB737HFW)

description:
https://www.encodeproject.org/experiments/ENCSR809SER/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR809SER
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB737HFW

source_name: Homo sapiens male adult dorsolateral prefrontal cortex tissue

value: dorsolateral prefrontal cortex

value: Kristin Ardlie

value: ENCBS322VPZ at ENCODE; https://www.encodeproject.org/ENCBS322VPZ/


title: DNase-seq from nucleus accumbens (ENCLB903KAX)

description:
https://www.encodeproject.org/experiments/ENCSR806GVM/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR806GVM
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB903KAX

value: nucleus accumbens

value: ENCBS346QVR at ENCODE; https://www.encodeproject.org/ENCBS346QVR/


title: snRNA-seq from left cerebral cortex (ENCLB862ALR)

description:
https://www.encodeproject.org/experiments/ENCSR084RQP/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 cortex P14 female normal 12k
experiment encode accession: ENCSR084RQP
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB862ALR

value: left cerebral cortex

value: postnatal

value: 14 day

value: Ali Mortazavi, UCI

value: The Jackson Laboratory

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: DNase-seq from caudate nucleus (ENCLB967KZT)

description:
https://www.encodeproject.org/experiments/ENCSR804WSV/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR804WSV
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB967KZT

value: caudate nucleus

value: tissue

value: ENCBS055DII at ENCODE; https://www.encodeproject.org/ENCBS055DII/


title: snRNA-seq from gastrocnemius (ENCLB620HWQ)

description:
https://www.encodeproject.org/experiments/ENCSR083EPD/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 gastrocnemius P18-20mo female normal 2k
experiment encode accession: ENCSR083EPD
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB620HWQ
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

source_name: Mus musculus strain B6CASTF1/J female adult (18-20 months) gastrocnemius tissue nuclear fraction

value: gastrocnemius

value: B6/Cast F1 gastrocnemius P18-20mo female 1

value: female

value: adult

value: 18-20 month

value: nucleus

value: ENCBS613QQM at ENCODE; https://www.encodeproject.org/ENCBS613QQM/


title: snRNA-seq from left cerebral cortex (ENCLB049FGC)

description:
https://www.encodeproject.org/experiments/ENCSR084RQP/
***************
biological replicate number: 2
technical replicate number: 2
description: Illumina short-read B6/Cast F1 cortex P14 female normal 12k
experiment encode accession: ENCSR084RQP
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB049FGC

value: B6/Cast F1 cortex P14 female 2

value: ENCBS837RGL at ENCODE; https://www.encodeproject.org/ENCBS837RGL/


title: DNase-seq from putamen (ENCLB976FID)

description:
https://www.encodeproject.org/experiments/ENCSR806EIL/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR806EIL
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-20
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB976FID

source_name: Homo sapiens male adult putamen tissue

value: putamen

value: male

value: unknown

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS546SGK at ENCODE; https://www.encodeproject.org/ENCBS546SGK/


title: snRNA-seq from gastrocnemius (ENCLB754SEX)

description:
https://www.encodeproject.org/experiments/ENCSR083EPD/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 gastrocnemius P18-20mo female normal 2k
experiment encode accession: ENCSR083EPD
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB754SEX
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

value: tissue

value: B6/Cast F1 gastrocnemius P18-20mo female 2

value: Ali Mortazavi, UCI

value: The Jackson Laboratory

value: ENCBS743KNR at ENCODE; https://www.encodeproject.org/ENCBS743KNR/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from left cerebral cortex (ENCLB065BSJ)

description:
https://www.encodeproject.org/experiments/ENCSR084RQP/
***************
biological replicate number: 1
technical replicate number: 6
description: Illumina short-read B6/Cast F1 cortex P14 female normal 12k
experiment encode accession: ENCSR084RQP
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB065BSJ

value: left cerebral cortex

value: B6/Cast F1 cortex P14 female 1

value: female

value: postnatal

value: 14 day

value: ENCBS543UZZ at ENCODE; https://www.encodeproject.org/ENCBS543UZZ/


title: DNase-seq from cerebellum (ENCLB981FUV)

description:
https://www.encodeproject.org/experiments/ENCSR802XPH/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR802XPH
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB981FUV

source_name: Homo sapiens female adult cerebellum tissue

value: cerebellum

value: adult

value: ENCBS835CRV at ENCODE; https://www.encodeproject.org/ENCBS835CRV/


title: snRNA-seq from layer of hippocampus (ENCLB246BML)

description:
https://www.encodeproject.org/experiments/ENCSR079GGS/
***************
biological replicate number: 2
technical replicate number: 2
description: Illumina short-read B6/Cast F1 hippocampus P10 female normal 12k
experiment encode accession: ENCSR079GGS
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB246BML

source_name: Mus musculus strain B6CASTF1/J female postnatal (10 days) layer of hippocampus tissue nuclear fraction

value: layer of hippocampus

value: B6/Cast F1 hippocampus P10 female 2

value: 10 day

value: nucleus

value: ENCBS600VDJ at ENCODE; https://www.encodeproject.org/ENCBS600VDJ/


title: snRNA-seq from layer of hippocampus (ENCLB662KSW)

description:
https://www.encodeproject.org/experiments/ENCSR079GGS/
***************
biological replicate number: 2
technical replicate number: 3
description: Illumina short-read B6/Cast F1 hippocampus P10 female normal 12k
experiment encode accession: ENCSR079GGS
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB662KSW

value: tissue

value: Ali Mortazavi, UCI

value: The Jackson Laboratory


title: snRNA-seq from left cerebral cortex (ENCLB861UVF)

description:
https://www.encodeproject.org/experiments/ENCSR081SXM/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 cortex P14 female normal 2k
experiment encode accession: ENCSR081SXM
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB861UVF
nucleic acid starting quantity: 83
nucleic acid starting quantity units: cells

value: left cerebral cortex

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: DNase-seq from Ammon's horn (ENCLB889ACI)

description:
https://www.encodeproject.org/experiments/ENCSR799FDC/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR799FDC
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB889ACI

source_name: Homo sapiens female adult Ammon's horn tissue

value: Ammon's horn

value: female

value: unknown

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS451RCG at ENCODE; https://www.encodeproject.org/ENCBS451RCG/


title: snRNA-seq from layer of hippocampus (ENCLB139USQ)

description:
https://www.encodeproject.org/experiments/ENCSR079GGS/
***************
biological replicate number: 1
technical replicate number: 1
description: Illumina short-read B6/Cast F1 hippocampus P10 female normal 12k
experiment encode accession: ENCSR079GGS
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB139USQ

value: B6/Cast F1 hippocampus P10 female 1

value: postnatal

value: ENCBS830ZRU at ENCODE; https://www.encodeproject.org/ENCBS830ZRU/


title: snRNA-seq from layer of hippocampus (ENCLB876BRR)

description:
https://www.encodeproject.org/experiments/ENCSR079GGS/
***************
biological replicate number: 2
technical replicate number: 1
description: Illumina short-read B6/Cast F1 hippocampus P10 female normal 12k
experiment encode accession: ENCSR079GGS
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB876BRR

value: layer of hippocampus

value: B6/Cast F1 hippocampus P10 female 2

value: 10 day


title: snRNA-seq from layer of hippocampus (ENCLB914OPW)

description:
https://www.encodeproject.org/experiments/ENCSR079GGS/
***************
biological replicate number: 1
technical replicate number: 5
description: Illumina short-read B6/Cast F1 hippocampus P10 female normal 12k
experiment encode accession: ENCSR079GGS
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB914OPW

value: tissue

value: nucleus


title: DNase-seq from Ammon's horn (ENCLB220FJS)

description:
https://www.encodeproject.org/experiments/ENCSR799FDC/
***************
biological replicate number: 4
technical replicate number: 1
description:
experiment encode accession: ENCSR799FDC
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB220FJS

value: adult

value: ENCBS237AYS at ENCODE; https://www.encodeproject.org/ENCBS237AYS/


title: DNase-seq from hypothalamus (ENCLB345ZFR)

description:
https://www.encodeproject.org/experiments/ENCSR797UUC/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR797UUC
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB345ZFR

source_name: Homo sapiens male adult hypothalamus tissue

value: hypothalamus

value: male

value: ENCBS500QYI at ENCODE; https://www.encodeproject.org/ENCBS500QYI/


title: DNase-seq from dorsolateral prefrontal cortex (ENCLB671RRR)

description:
https://www.encodeproject.org/experiments/ENCSR794ZBF/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR794ZBF
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB671RRR

source_name: Homo sapiens female adult dorsolateral prefrontal cortex tissue

value: dorsolateral prefrontal cortex

value: female

value: unknown

value: ENCBS754CRT at ENCODE; https://www.encodeproject.org/ENCBS754CRT/


title: DNase-seq from Ammon's horn (ENCLB586PGF)

description:
https://www.encodeproject.org/experiments/ENCSR799FDC/
***************
biological replicate number: 3
technical replicate number: 1
description:
experiment encode accession: ENCSR799FDC
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB586PGF

value: Ammon's horn

value: John Stamatoyannopoulos, UW

value: Kristin Ardlie

value: ENCBS434ZLT at ENCODE; https://www.encodeproject.org/ENCBS434ZLT/


title: DNase-seq from dorsolateral prefrontal cortex (ENCLB638MEB)

description:
https://www.encodeproject.org/experiments/ENCSR794ZBF/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR794ZBF
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB638MEB

value: ENCBS666XEC at ENCODE; https://www.encodeproject.org/ENCBS666XEC/


title: DNase-seq from putamen (ENCLB627EAJ)

description:
https://www.encodeproject.org/experiments/ENCSR805MYY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR805MYY
assay title: DNase-seq
assembly: GRCh38
encode release date: 2025-09-19
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB627EAJ

value: putamen

value: ENCBS103IVZ at ENCODE; https://www.encodeproject.org/ENCBS103IVZ/


title: snRNA-seq from layer of hippocampus (ENCLB713GNH)

description:
https://www.encodeproject.org/experiments/ENCSR079GGS/
***************
biological replicate number: 1
technical replicate number: 4
description: Illumina short-read B6/Cast F1 hippocampus P10 female normal 12k
experiment encode accession: ENCSR079GGS
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB713GNH

value: layer of hippocampus

value: tissue

value: B6/Cast F1 hippocampus P10 female 1

value: postnatal

value: 10 day

value: Ali Mortazavi, UCI

value: nucleus

value: The Jackson Laboratory

value: ENCBS830ZRU at ENCODE; https://www.encodeproject.org/ENCBS830ZRU/

value: Derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/


title: snRNA-seq from layer of hippocampus (ENCLB634APU)

description:
https://www.encodeproject.org/experiments/ENCSR079GGS/
***************
biological replicate number: 1
technical replicate number: 3
description: Illumina short-read B6/Cast F1 hippocampus P10 female normal 12k
experiment encode accession: ENCSR079GGS
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB634APU

value: female


title: snRNA-seq from layer of hippocampus (ENCLB291WCU)

description:
https://www.encodeproject.org/experiments/ENCSR079GGS/
***************
biological replicate number: 1
technical replicate number: 2
description: Illumina short-read B6/Cast F1 hippocampus P10 female normal 12k
experiment encode accession: ENCSR079GGS
assay title: snRNA-seq
assembly: mm10
encode release date: 2022-03-25
lab: Ali Mortazavi, UCI
library encode accession: ENCLB291WCU