title: LID_111203_PID_10498

description:
Library name: LID_111203_PID_10498
dog_id:16861634 precision cohort year 1. dog age at collection:9.98874439120846


title: LID_111205_PID_10498

status: Public on Apr 15 2026

type: SRA

city: Tempe

first: Noah

last: Snyder-Mackler

state: AZ

address: 427 East Tyler Mall

country: USA

institute: Arizona State University

description:
Library name: LID_111205_PID_10498
dog_id:16895360 precision cohort year 1. dog age at collection:1.49045554795041

library_source: genomic

data_processing:
bcl2fastq
Supplementary files format and content: sumamrized to species level

molecule: genomic DNA

organism: Canis lupus familiaris

source_name: feces metagenome

extract_protocol:
For each fecal sample, a lysate was prepared using the following procedure: The fecal collection tube was thawed and vortexed to homogenize the fecal sample in the storage solution. A small aliquot (∼200 µL) of the fecal slurry was removed using a fresh 1 mL serological pipette and transferred to a 2 mL tube pre-filled with garnet shards and a 6 mm zirconium bead (Benchmark Scientific, D1033-30G). To this tube, 365 µL of PowerBead solution (Qiagen, #12955-4-bs) and 20 µL of 20% sodium dodecyl sulfate (SDS) were added. The tubes were subjected to bead-beating using a TissueLyzer instrument for 45 seconds at 30 cycles per second. The resulting fecal homogenate was treated twice with Protein Precipitation Solution (MP Biomedical, product no. 116560203) to remove proteins.
metagenomic library prep doi: dx.doi.org/10.17504/protocols.io.rm7vzbob4vx1/v1

tag: tissue

value: feces metagenome

tag: batch


title: LID_111200_PID_10498

description:
Library name: LID_111200_PID_10498
dog_id:16876100 precision cohort year 1. dog age at collection:1.82443531827515


title: LID_111204_PID_10498

description:
Library name: LID_111204_PID_10498
dog_id:16895264 precision cohort year 1. dog age at collection:3.08112784242148


title: LID_111198_PID_10498

description:
Library name: LID_111198_PID_10498
dog_id:16801325 precision cohort year 1. dog age at collection:2.47330595482546


title: LID_111197_PID_10498

description:
Library name: LID_111197_PID_10498
dog_id:16811504 precision cohort year 1. dog age at collection:6.13954483230664


title: LID_111195_PID_10498

description:
Library name: LID_111195_PID_10498
dog_id:16788805 precision cohort year 1. dog age at collection:2.77195984485512


title: LID_111212_PID_10499

description:
Library name: LID_111212_PID_10499
dog_id:16873172 precision cohort year 1. dog age at collection:4.32092744695414


title: LID_111191_PID_10498

description:
Library name: LID_111191_PID_10498
dog_id:16831415 precision cohort year 1. dog age at collection:5.47170887519964


title: LID_111192_PID_10498

description:
Library name: LID_111192_PID_10498
dog_id:16811597 precision cohort year 1. dog age at collection:1.80806525211043


title: LID_111190_PID_10498

description:
Library name: LID_111190_PID_10498
dog_id:16783783 precision cohort year 1. dog age at collection:1.30161989504905


title: LID_111194_PID_10498

description:
Library name: LID_111194_PID_10498
dog_id:16790660 precision cohort year 1. dog age at collection:10.3254715187467


title: LID_111187_PID_10498

description:
Library name: LID_111187_PID_10498
dog_id:16906973 precision cohort year 1. dog age at collection:5.15911856414936


title: LID_111188_PID_10498

description:
Library name: LID_111188_PID_10498
dog_id:16911086 precision cohort year 1. dog age at collection:8.16006920678379


title: LID_111189_PID_10498

description:
Library name: LID_111189_PID_10498
dog_id:16787767 precision cohort year 1. dog age at collection:1.96965548710929


title: LID_111182_PID_10498

description:
Library name: LID_111182_PID_10498
dog_id:16801397 precision cohort year 1. dog age at collection:2.30645676477299


title: LID_111181_PID_10498

description:
Library name: LID_111181_PID_10498
dog_id:16788619 precision cohort year 1. dog age at collection:3.97114799604533


title: LID_111184_PID_10498

description:
Library name: LID_111184_PID_10498
dog_id:16857566 precision cohort year 1. dog age at collection:3.48117727583847


title: LID_111183_PID_10498

description:
Library name: LID_111183_PID_10498
dog_id:16814384 precision cohort year 1. dog age at collection:8.80857859913301


title: LID_111180_PID_10498

description:
Library name: LID_111180_PID_10498
dog_id:16857659 precision cohort year 1. dog age at collection:2.22518822724162


title: LID_111185_PID_10498

description:
Library name: LID_111185_PID_10498
dog_id:16802909 precision cohort year 1. dog age at collection:3.13666438512434


title: LID_111175_PID_10498

description:
Library name: LID_111175_PID_10498
dog_id:16901954 precision cohort year 1. dog age at collection:2.66232222982736


title: LID_111174_PID_10498

description:
Library name: LID_111174_PID_10498
dog_id:16908284 precision cohort year 1. dog age at collection:5.91033538672142


title: LID_111176_PID_10498

description:
Library name: LID_111176_PID_10498
dog_id:16906880 precision cohort year 1. dog age at collection:3.07894136436231


title: LID_111171_PID_10498

description:
Library name: LID_111171_PID_10498
dog_id:16959023 precision cohort year 1. dog age at collection:0.677446954140999


title: LID_111168_PID_10498

description:
Library name: LID_111168_PID_10498
dog_id:16911179 precision cohort year 1. dog age at collection:4.32782911248004


title: LID_111172_PID_10498

description:
Library name: LID_111172_PID_10498
dog_id:16970609 precision cohort year 1. dog age at collection:4.51032397900981


title: LID_111170_PID_10498

description:
Library name: LID_111170_PID_10498
dog_id:16907066 precision cohort year 1. dog age at collection:13.5453456536619


title: LID_111177_PID_10498

description:
Library name: LID_111177_PID_10498
dog_id:16787671 precision cohort year 1. dog age at collection:7.97125256673511


title: LID_111173_PID_10498

description:
Library name: LID_111173_PID_10498
dog_id:16964531 precision cohort year 1. dog age at collection:6.26009582477755


title: LID_111165_PID_10498

description:
Library name: LID_111165_PID_10498
dog_id:16951004 precision cohort year 1. dog age at collection:1.25453456536619


title: LID_111167_PID_10498

description:
Library name: LID_111167_PID_10498
dog_id:16934168 precision cohort year 1. dog age at collection:1.75895505361624


title: LID_111166_PID_10498

description:
Library name: LID_111166_PID_10498
dog_id:16950056 precision cohort year 1. dog age at collection:4.17162902121834


title: LID_111169_PID_10498

description:
Library name: LID_111169_PID_10498
dog_id:16976822 precision cohort year 1. dog age at collection:4.93206707734428


title: LID_111159_PID_10498

description:
Library name: LID_111159_PID_10498
dog_id:16965401 precision cohort year 1. dog age at collection:2.84630009886683


title: LID_111158_PID_10498

description:
Library name: LID_111158_PID_10498
dog_id:16958903 precision cohort year 1. dog age at collection:2.51186402007757


title: LID_111178_PID_10498

description:
Library name: LID_111178_PID_10498
dog_id:16782607 precision cohort year 1. dog age at collection:17.8874496159404


title: LID_111157_PID_10498

description:
Library name: LID_111157_PID_10498
dog_id:16965464 precision cohort year 1. dog age at collection:4.42538405962431


title: LID_111164_PID_10498

description:
Library name: LID_111164_PID_10498
dog_id:16949963 precision cohort year 1. dog age at collection:3.09525439196897


title: LID_111151_PID_10498

description:
Library name: LID_111151_PID_10498
dog_id:15890953 precision cohort year 1. dog age at collection:9.44159251654118


title: LID_111163_PID_10498

description:
Library name: LID_111163_PID_10498
dog_id:16977047 precision cohort year 1. dog age at collection:4.01534337211955


title: LID_111161_PID_10498

description:
Library name: LID_111161_PID_10498
dog_id:16972226 precision cohort year 1. dog age at collection:7.17716176135067


title: LID_111146_PID_10498

description:
Library name: LID_111146_PID_10498
dog_id:15963883 precision cohort year 1. dog age at collection:8.19815195071869


title: LID_111147_PID_10498

description:
Library name: LID_111147_PID_10498
dog_id:15849163 precision cohort year 1. dog age at collection:6.33632785763176


title: LID_111145_PID_10498

description:
Library name: LID_111145_PID_10498
dog_id:15957178 precision cohort year 1. dog age at collection:3.19900752908966


title: LID_111144_PID_10498

description:
Library name: LID_111144_PID_10498
dog_id:15898984 precision cohort year 1. dog age at collection:2.01631302760666


title: LID_111150_PID_10498

description:
Library name: LID_111150_PID_10498
dog_id:15896155 precision cohort year 1. dog age at collection:5.40822496007301


title: LID_111142_PID_10498

description:
Library name: LID_111142_PID_10498
dog_id:15947569 precision cohort year 1. dog age at collection:4.36290782569017


title: LID_111139_PID_10498

description:
Library name: LID_111139_PID_10498
dog_id:16179526 precision cohort year 1. dog age at collection:12.3795345653662


title: LID_111138_PID_10498

description:
Library name: LID_111138_PID_10498
dog_id:16179775 precision cohort year 1. dog age at collection:11.4211156741958


title: LID_111141_PID_10498

description:
Library name: LID_111141_PID_10498
dog_id:16191694 precision cohort year 1. dog age at collection:4.42311202372804


title: LID_111149_PID_10498

description:
Library name: LID_111149_PID_10498
dog_id:15934231 precision cohort year 1. dog age at collection:5.44438740588638


title: LID_111137_PID_10498

description:
Library name: LID_111137_PID_10498
dog_id:16173679 precision cohort year 1. dog age at collection:4.50530458590007


title: LID_111136_PID_10498

description:
Library name: LID_111136_PID_10498
dog_id:16256230 precision cohort year 1. dog age at collection:12.3574036048369


title: LID_111131_PID_10498

description:
Library name: LID_111131_PID_10498
dog_id:15963979 precision cohort year 1. dog age at collection:6.28490759753593


title: LID_111135_PID_10498

description:
Library name: LID_111135_PID_10498
dog_id:16193953 precision cohort year 1. dog age at collection:1.75878393794205


title: LID_111133_PID_10498

description:
Library name: LID_111133_PID_10498
dog_id:15951835 precision cohort year 1. dog age at collection:3.53334474104495


title: LID_111123_PID_10498

description:
Library name: LID_111123_PID_10498
dog_id:16258276 precision cohort year 1. dog age at collection:4.58327629477527


title: LID_111126_PID_10498

description:
Library name: LID_111126_PID_10498
dog_id:15898891 precision cohort year 1. dog age at collection:8.26743478591528


title: LID_111128_PID_10498

description:
Library name: LID_111128_PID_10498
dog_id:15953041 precision cohort year 1. dog age at collection:3.28091489847137


title: LID_111122_PID_10498

description:
Library name: LID_111122_PID_10498
dog_id:16270846 precision cohort year 1. dog age at collection:1.52669404517454


title: LID_111125_PID_10498

description:
Library name: LID_111125_PID_10498
dog_id:16244689 precision cohort year 1. dog age at collection:1.35415240702715


title: LID_111124_PID_10498

description:
Library name: LID_111124_PID_10498
dog_id:16278358 precision cohort year 1. dog age at collection:16.3623944786676


title: LID_111140_PID_10498

description:
Library name: LID_111140_PID_10498
dog_id:16195882 precision cohort year 1. dog age at collection:2.67693360711841


title: LID_111117_PID_10498

description:
Library name: LID_111117_PID_10498
dog_id:16292950 precision cohort year 1. dog age at collection:6.45982013841357


title: LID_111118_PID_10498

description:
Library name: LID_111118_PID_10498
dog_id:16268323 precision cohort year 1. dog age at collection:6.94758156513803


title: LID_111129_PID_10498

description:
Library name: LID_111129_PID_10498
dog_id:15959962 precision cohort year 1. dog age at collection:10.3396646132786


title: LID_111130_PID_10498

description:
Library name: LID_111130_PID_10498
dog_id:15960922 precision cohort year 1. dog age at collection:5.78342459502624


title: LID_111121_PID_10498

description:
Library name: LID_111121_PID_10498
dog_id:16286434 precision cohort year 1. dog age at collection:1.3620332344665


title: LID_111134_PID_10498

description:
Library name: LID_111134_PID_10498
dog_id:16245889 precision cohort year 1. dog age at collection:4.48100616016427


title: LID_111127_PID_10498

description:
Library name: LID_111127_PID_10498
dog_id:15957085 precision cohort year 1. dog age at collection:6.87052247319188


title: LID_111120_PID_10498

description:
Library name: LID_111120_PID_10498
dog_id:16271707 precision cohort year 1. dog age at collection:1.6937029431896


title: LID_111119_PID_10498

description:
Library name: LID_111119_PID_10498
dog_id:16270744 precision cohort year 1. dog age at collection:7.54950946840064


title: LID_111106_PID_10498

description:
Library name: LID_111106_PID_10498
dog_id:16150516 precision cohort year 1. dog age at collection:10.4767016503156


title: LID_111113_PID_10498

description:
Library name: LID_111113_PID_10498
dog_id:16117663 precision cohort year 1. dog age at collection:10.7416989885162


title: LID_111107_PID_10498

description:
Library name: LID_111107_PID_10498
dog_id:16151371 precision cohort year 1. dog age at collection:10.662559890486


title: LID_111108_PID_10498

description:
Library name: LID_111108_PID_10498
dog_id:16097986 precision cohort year 1. dog age at collection:4.31643090729333


title: LID_111110_PID_10498

description:
Library name: LID_111110_PID_10498
dog_id:16096303 precision cohort year 1. dog age at collection:3.40135181382615


title: LID_111109_PID_10498

description:
Library name: LID_111109_PID_10498
dog_id:16096366 precision cohort year 1. dog age at collection:2.31981519507187


title: LID_111116_PID_10498

description:
Library name: LID_111116_PID_10498
dog_id:16282750 precision cohort year 1. dog age at collection:2.94969199178645


title: LID_111105_PID_10498

description:
Library name: LID_111105_PID_10498
dog_id:16130893 precision cohort year 1. dog age at collection:3.48663396456004


title: LID_111103_PID_10498

description:
Library name: LID_111103_PID_10498
dog_id:16157662 precision cohort year 1. dog age at collection:3.08416989885162


title: LID_111102_PID_10498

description:
Library name: LID_111102_PID_10498
dog_id:16179433 precision cohort year 1. dog age at collection:8.67206631683018


title: LID_111100_PID_10498

description:
Library name: LID_111100_PID_10498
dog_id:16173790 precision cohort year 1. dog age at collection:0.924005627804396


title: LID_1070859_PID_10556

description:
Library name: LID_1070859_PID_10556
dog_id:16727848 precision cohort year 1. dog age at collection:2.78861510381018


title: LID_111093_PID_10498

description:
Library name: LID_111093_PID_10498
dog_id:16096210 precision cohort year 1. dog age at collection:7.65371891398585


title: LID_111097_PID_10498

description:
Library name: LID_111097_PID_10498
dog_id:16163992 precision cohort year 1. dog age at collection:2.41881511902046


title: LID_112437_PID_10555

description:
Library name: LID_112437_PID_10555
dog_id:18726689 precision cohort year 1. dog age at collection:3.25404973762263


title: LID_111099_PID_10498

description:
Library name: LID_111099_PID_10498
dog_id:16179619 precision cohort year 1. dog age at collection:9.33709787816564


title: LID_112417_PID_10555

description:
Library name: LID_112417_PID_10555
dog_id:18779609 precision cohort year 1. dog age at collection:2.79097269754354


title: LID_111098_PID_10498

description:
Library name: LID_111098_PID_10498
dog_id:16111960 precision cohort year 1. dog age at collection:7.65622861054073


title: LID_1070860_PID_10556

description:
Library name: LID_1070860_PID_10556
dog_id:16708960 precision cohort year 1. dog age at collection:3.37419195376074


title: LID_1070869_PID_10556

description:
Library name: LID_1070869_PID_10556
dog_id:17224037 precision cohort year 1. dog age at collection:2.9005247547342


title: LID_1070864_PID_10556

description:
Library name: LID_1070864_PID_10556
dog_id:16364773 precision cohort year 1. dog age at collection:9.29606814206404


title: LID_1070870_PID_10556

description:
Library name: LID_1070870_PID_10556
dog_id:17242697 precision cohort year 1. dog age at collection:1.06684919005248


title: LID_1070874_PID_10556

description:
Library name: LID_1070874_PID_10556
dog_id:17110784 precision cohort year 1. dog age at collection:1.1208076659822


title: LID_1070872_PID_10556

description:
Library name: LID_1070872_PID_10556
dog_id:17264171 precision cohort year 1. dog age at collection:5.31804699977185


title: LID_1070877_PID_10556

description:
Library name: LID_1070877_PID_10556
dog_id:17025521 precision cohort year 1. dog age at collection:2.86242299794661


title: LID_1070876_PID_10556

description:
Library name: LID_1070876_PID_10556
dog_id:17040896 precision cohort year 1. dog age at collection:4.52721119476766


title: LID_1070880_PID_10556

description:
Library name: LID_1070880_PID_10556
dog_id:17334506 precision cohort year 1. dog age at collection:3.33418891170431


title: LID_1070779_PID_10555

description:
Library name: LID_1070779_PID_10555
dog_id:24403218 precision cohort year 1. dog age at collection:10.2547912388775


title: LID_1070372_PID_10550

description:
Library name: LID_1070372_PID_10550
dog_id:23149129 precision cohort year 1. dog age at collection:1.77264430755191


title: LID_1070886_PID_10556

description:
Library name: LID_1070886_PID_10556
dog_id:16857473 precision cohort year 1. dog age at collection:6.99083580500418


title: LID_1070875_PID_10556

description:
Library name: LID_1070875_PID_10556
dog_id:17095016 precision cohort year 1. dog age at collection:2.86498973305955


title: LID_1070878_PID_10556

description:
Library name: LID_1070878_PID_10556
dog_id:17017841 precision cohort year 1. dog age at collection:5.34938018100236


title: LID_111202_PID_10554

description:
Library name: LID_111202_PID_10554
dog_id:16878398 precision cohort year 1. dog age at collection:2.40765457449236


title: LID_1070586_PID_10550

description:
Library name: LID_1070586_PID_10550
dog_id:23603109 precision cohort year 1. dog age at collection:8.27224503764545


title: LID_1070319_PID_10549

description:
Library name: LID_1070319_PID_10549
dog_id:22872536 precision cohort year 1. dog age at collection:2.98263175906913


title: LID_111987_PID_10554

description:
Library name: LID_111987_PID_10554
dog_id:17832245 precision cohort year 1. dog age at collection:4.25567533652749


title: LID_1070888_PID_10556

description:
Library name: LID_1070888_PID_10556
dog_id:17625983 precision cohort year 1. dog age at collection:2.21329568788501


title: LID_1070885_PID_10556

description:
Library name: LID_1070885_PID_10556
dog_id:16906787 precision cohort year 1. dog age at collection:5.827800593201


title: LID_1070328_PID_10549

description:
Library name: LID_1070328_PID_10549
dog_id:22928516 precision cohort year 1. dog age at collection:2.23009354323523


title: LID_1070394_PID_10547

description:
Library name: LID_1070394_PID_10547
dog_id:23339687 precision cohort year 1. dog age at collection:2.3010495094684


title: LID_1070891_PID_10556

description:
Library name: LID_1070891_PID_10556
dog_id:17541935 precision cohort year 1. dog age at collection:5.27407027150354


title: LID_1066356_PID_10554

description:
Library name: LID_1066356_PID_10554
dog_id:14906612 precision cohort year 1. dog age at collection:11.3467944330367


title: LID_1066392_PID_10554

description:
Library name: LID_1066392_PID_10554
dog_id:18444224 precision cohort year 1. dog age at collection:3.1305042208533


title: LID_111112_PID_10498

description:
Library name: LID_111112_PID_10498
dog_id:16098079 precision cohort year 1. dog age at collection:4.23414328085786


title: LID_1070882_PID_10556

description:
Library name: LID_1070882_PID_10556
dog_id:15947506 precision cohort year 1. dog age at collection:13.4470111795574


title: LID_1070093_PID_10549

description:
Library name: LID_1070093_PID_10549
dog_id:22284056 precision cohort year 1. dog age at collection:3.13584683245874


title: LID_1070356_PID_10547

description:
Library name: LID_1070356_PID_10547
dog_id:23100976 precision cohort year 1. dog age at collection:13.348790782569


title: LID_1070794_PID_10555

description:
Library name: LID_1070794_PID_10555
dog_id:24437997 precision cohort year 1. dog age at collection:5.92345425507643


title: LID_1070795_PID_10555

description:
Library name: LID_1070795_PID_10555
dog_id:24438090 precision cohort year 1. dog age at collection:4.17642026009583


title: LID_1070361_PID_10547

description:
Library name: LID_1070361_PID_10547
dog_id:23106943 precision cohort year 1. dog age at collection:3.18788501026694


title: LID_1070364_PID_10547

description:
Library name: LID_1070364_PID_10547
dog_id:23130103 precision cohort year 1. dog age at collection:4.43677275838467


title: LID_1070667_PID_10554

description:
Library name: LID_1070667_PID_10554
dog_id:23896420 precision cohort year 1. dog age at collection:3.24287018024184


title: LID_1070894_PID_10556

description:
Library name: LID_1070894_PID_10556
dog_id:17674304 precision cohort year 1. dog age at collection:8.74903034451289


title: LID_1070587_PID_10550

description:
Library name: LID_1070587_PID_10550
dog_id:23603202 precision cohort year 1. dog age at collection:3.68657312343144


title: LID_1070137_PID_10547

description:
Library name: LID_1070137_PID_10547
dog_id:23387606 precision cohort year 1. dog age at collection:7.54677161761351


title: LID_1070138_PID_10547

description:
Library name: LID_1070138_PID_10547
dog_id:23387792 precision cohort year 1. dog age at collection:11.3084074834588


title: LID_1070800_PID_10555

description:
Library name: LID_1070800_PID_10555
dog_id:24451865 precision cohort year 1. dog age at collection:9.85169974903035


title: LID_1070899_PID_10556

description:
Library name: LID_1070899_PID_10556
dog_id:18598271 precision cohort year 1. dog age at collection:1.83287702486881


title: LID_1070906_PID_10556

description:
Library name: LID_1070906_PID_10556
dog_id:15584179 precision cohort year 1. dog age at collection:7.09782112708191


title: LID_1070349_PID_10549

description:
Library name: LID_1070349_PID_10549
dog_id:23070083 precision cohort year 1. dog age at collection:9.00890752148452


title: LID_1070892_PID_10556

description:
Library name: LID_1070892_PID_10556
dog_id:17489678 precision cohort year 1. dog age at collection:4.55207620351358


title: LID_1070347_PID_10549

description:
Library name: LID_1070347_PID_10549
dog_id:23069708 precision cohort year 1. dog age at collection:11.2538215833904


title: LID_1070908_PID_10556

description:
Library name: LID_1070908_PID_10556
dog_id:15742408 precision cohort year 1. dog age at collection:8.56285649098791


title: LID_1070683_PID_10554

description:
Library name: LID_1070683_PID_10554
dog_id:23978190 precision cohort year 1. dog age at collection:10.5722868659214


title: LID_1070895_PID_10556

description:
Library name: LID_1070895_PID_10556
dog_id:18618611 precision cohort year 1. dog age at collection:2.16700889801506


title: LID_1070672_PID_10554

description:
Library name: LID_1070672_PID_10554
dog_id:23926247 precision cohort year 1. dog age at collection:1.25505741881512


title: LID_1070671_PID_10554

description:
Library name: LID_1070671_PID_10554
dog_id:23926154 precision cohort year 1. dog age at collection:15.2540972697544


title: LID_1070812_PID_10555

description:
Library name: LID_1070812_PID_10555
dog_id:24481646 precision cohort year 1. dog age at collection:3.85643394934976


title: LID_1070704_PID_10554

description:
Library name: LID_1070704_PID_10554
dog_id:23941916 precision cohort year 1. dog age at collection:15.9251749182447


title: LID_1070900_PID_10556

description:
Library name: LID_1070900_PID_10556
dog_id:18534674 precision cohort year 1. dog age at collection:1.90103810175679


title: LID_1070722_PID_10554

description:
Library name: LID_1070722_PID_10554
dog_id:24116507 precision cohort year 1. dog age at collection:2.37759525439197


title: LID_1070110_PID_10547

description:
Library name: LID_1070110_PID_10547
dog_id:22623998 precision cohort year 1. dog age at collection:5.86352574340254


title: LID_1070344_PID_10549

description:
Library name: LID_1070344_PID_10549
dog_id:23007572 precision cohort year 1. dog age at collection:7.50005703855807


title: LID_1070708_PID_10554

description:
Library name: LID_1070708_PID_10554
dog_id:24056574 precision cohort year 1. dog age at collection:15.8616624838391


title: LID_1070803_PID_10555

description:
Library name: LID_1070803_PID_10555
dog_id:24465721 precision cohort year 1. dog age at collection:7.85441858696479


title: LID_1070348_PID_10549

description:
Library name: LID_1070348_PID_10549
dog_id:23069807 precision cohort year 1. dog age at collection:10.3310898167161


title: LID_1070114_PID_10547

description:
Library name: LID_1070114_PID_10547
dog_id:22656449 precision cohort year 1. dog age at collection:3.0320841889117


title: LID_1070907_PID_10556

description:
Library name: LID_1070907_PID_10556
dog_id:15747136 precision cohort year 1. dog age at collection:5.14031485284052


title: LID_1070358_PID_10549

description:
Library name: LID_1070358_PID_10549
dog_id:23129908 precision cohort year 1. dog age at collection:4.77056240018252


title: LID_1070898_PID_10556

description:
Library name: LID_1070898_PID_10556
dog_id:18547049 precision cohort year 1. dog age at collection:4.40925165411818


title: LID_1070909_PID_10556

description:
Library name: LID_1070909_PID_10556
dog_id:15675481 precision cohort year 1. dog age at collection:7.12719598448551


title: LID_1070119_PID_10547

description:
Library name: LID_1070119_PID_10547
dog_id:22715111 precision cohort year 1. dog age at collection:5.32443531827515


title: LID_1070614_PID_10550

description:
Library name: LID_1070614_PID_10550
dog_id:23509342 precision cohort year 1. dog age at collection:1.57885580652521


title: LID_1070912_PID_10556

description:
Library name: LID_1070912_PID_10556
dog_id:15688378 precision cohort year 1. dog age at collection:3.1387843181991


title: LID_1070359_PID_10549

description:
Library name: LID_1070359_PID_10549
dog_id:23130004 precision cohort year 1. dog age at collection:2.5178055365427


title: LID_1070916_PID_10556

description:
Library name: LID_1070916_PID_10556
dog_id:15629464 precision cohort year 1. dog age at collection:6.45410297361016


title: LID_1070103_PID_10547

description:
Library name: LID_1070103_PID_10547
dog_id:22610777 precision cohort year 1. dog age at collection:13.1132025249068


title: LID_1070727_PID_10554

description:
Library name: LID_1070727_PID_10554
dog_id:24130047 precision cohort year 1. dog age at collection:11.4733059548255


title: LID_1070729_PID_10554

description:
Library name: LID_1070729_PID_10554
dog_id:24129954 precision cohort year 1. dog age at collection:14.7087040839608


title: LID_1070917_PID_10556

description:
Library name: LID_1070917_PID_10556
dog_id:15676870 precision cohort year 1. dog age at collection:6.13660734656628


title: LID_1070915_PID_10556

description:
Library name: LID_1070915_PID_10556
dog_id:15732121 precision cohort year 1. dog age at collection:6.72859723172865


title: LID_1070827_PID_10555

description:
Library name: LID_1070827_PID_10555
dog_id:24534098 precision cohort year 1. dog age at collection:15.4509468400639


title: LID_1070920_PID_10556

description:
Library name: LID_1070920_PID_10556
dog_id:15592003 precision cohort year 1. dog age at collection:3.60147159479808


title: LID_1070377_PID_10549

description:
Library name: LID_1070377_PID_10549
dog_id:23211601 precision cohort year 1. dog age at collection:9.94313255760894


title: LID_1070724_PID_10554

description:
Library name: LID_1070724_PID_10554
dog_id:24129861 precision cohort year 1. dog age at collection:12.6280705757092


title: LID_1070381_PID_10549

description:
Library name: LID_1070381_PID_10549
dog_id:23233535 precision cohort year 1. dog age at collection:10.9747889573352


title: LID_1070910_PID_10556

description:
Library name: LID_1070910_PID_10556
dog_id:15688285 precision cohort year 1. dog age at collection:4.55709559662332


title: LID_1070623_PID_10550

description:
Library name: LID_1070623_PID_10550
dog_id:23747224 precision cohort year 1. dog age at collection:16.050678758841


title: LID_1070365_PID_10549

description:
Library name: LID_1070365_PID_10549
dog_id:23130343 precision cohort year 1. dog age at collection:4.77041980378736


title: LID_1070097_PID_10547

description:
Library name: LID_1070097_PID_10547
dog_id:22327550 precision cohort year 1. dog age at collection:3.0979922427561


title: LID_1070831_PID_10555

description:
Library name: LID_1070831_PID_10555
dog_id:24552700 precision cohort year 1. dog age at collection:6.61915354779831


title: LID_1070385_PID_10549

description:
Library name: LID_1070385_PID_10549
dog_id:23276327 precision cohort year 1. dog age at collection:2.45685033082364


title: LID_1070627_PID_10550

description:
Library name: LID_1070627_PID_10550
dog_id:23767483 precision cohort year 1. dog age at collection:16.0558977869039


title: LID_1070919_PID_10556

description:
Library name: LID_1070919_PID_10556
dog_id:15611152 precision cohort year 1. dog age at collection:4.26728268309377


title: LID_1070094_PID_10547

description:
Library name: LID_1070094_PID_10547
dog_id:22284182 precision cohort year 1. dog age at collection:3.72221081451061


title: LID_1070622_PID_10550

description:
Library name: LID_1070622_PID_10550
dog_id:23728728 precision cohort year 1. dog age at collection:3.78821583390372


title: LID_1070923_PID_10556

description:
Library name: LID_1070923_PID_10556
dog_id:17892197 precision cohort year 1. dog age at collection:4.43382006236216


title: LID_1070386_PID_10549

description:
Library name: LID_1070386_PID_10549
dog_id:23276420 precision cohort year 1. dog age at collection:10.1261692904403


title: LID_1070387_PID_10549

description:
Library name: LID_1070387_PID_10549
dog_id:23276513 precision cohort year 1. dog age at collection:2.3724617841661


title: LID_1070926_PID_10556

description:
Library name: LID_1070926_PID_10556
dog_id:18656141 precision cohort year 1. dog age at collection:2.50353639060005


title: LID_1070746_PID_10554

description:
Library name: LID_1070746_PID_10554
dog_id:24253623 precision cohort year 1. dog age at collection:12.9787816563997


title: LID_1070927_PID_10556

description:
Library name: LID_1070927_PID_10556
dog_id:18655928 precision cohort year 1. dog age at collection:11.8231386417218


title: LID_1070837_PID_10555

description:
Library name: LID_1070837_PID_10555
dog_id:24574013 precision cohort year 1. dog age at collection:12.9573351585672


title: LID_1070747_PID_10554

description:
Library name: LID_1070747_PID_10554
dog_id:24253743 precision cohort year 1. dog age at collection:7.56050840368089


title: LID_1070930_PID_10556

description:
Library name: LID_1070930_PID_10556
dog_id:18894848 precision cohort year 1. dog age at collection:5.36732831394022


title: LID_1070631_PID_10550

description:
Library name: LID_1070631_PID_10550
dog_id:23789301 precision cohort year 1. dog age at collection:3.97672826830938


title: LID_1070751_PID_10554

description:
Library name: LID_1070751_PID_10554
dog_id:24300566 precision cohort year 1. dog age at collection:7.48089208304814


title: LID_1070078_PID_10547

description:
Library name: LID_1070078_PID_10547
dog_id:22223216 precision cohort year 1. dog age at collection:11.801562856491


title: LID_1070753_PID_10554

description:
Library name: LID_1070753_PID_10554
dog_id:24300659 precision cohort year 1. dog age at collection:2.40227393718153


title: LID_1070929_PID_10556

description:
Library name: LID_1070929_PID_10556
dog_id:18894587 precision cohort year 1. dog age at collection:3.22887672066317


title: LID_1070646_PID_10550

description:
Library name: LID_1070646_PID_10550
dog_id:23844058 precision cohort year 1. dog age at collection:13.0716214160773


title: LID_1070842_PID_10555

description:
Library name: LID_1070842_PID_10555
dog_id:24592451 precision cohort year 1. dog age at collection:4.2969427332877


title: LID_1070928_PID_10556

description:
Library name: LID_1070928_PID_10556
dog_id:18894650 precision cohort year 1. dog age at collection:10.9497205110655


title: LID_1070750_PID_10554

description:
Library name: LID_1070750_PID_10554
dog_id:24285443 precision cohort year 1. dog age at collection:11.1472165183664


title: LID_1070937_PID_10556

description:
Library name: LID_1070937_PID_10556
dog_id:16514854 precision cohort year 1. dog age at collection:2.75310860141456


title: LID_1070647_PID_10550

description:
Library name: LID_1070647_PID_10550
dog_id:23844151 precision cohort year 1. dog age at collection:1.32118412046543


title: LID_1070634_PID_10550

description:
Library name: LID_1070634_PID_10550
dog_id:23805811 precision cohort year 1. dog age at collection:13.9565366187543


title: LID_1070942_PID_10556

description:
Library name: LID_1070942_PID_10556
dog_id:19002722 precision cohort year 1. dog age at collection:1.41130504220853


title: LID_1070941_PID_10556

description:
Library name: LID_1070941_PID_10556
dog_id:19016978 precision cohort year 1. dog age at collection:3.66183740208381


title: LID_1070755_PID_10554

description:
Library name: LID_1070755_PID_10554
dog_id:24317295 precision cohort year 1. dog age at collection:12.6913073237509


title: LID_1070940_PID_10556

description:
Library name: LID_1070940_PID_10556
dog_id:19023308 precision cohort year 1. dog age at collection:2.91204654346338


title: LID_1070652_PID_10550

description:
Library name: LID_1070652_PID_10550
dog_id:23875639 precision cohort year 1. dog age at collection:13.5723819301848


title: LID_1070760_PID_10554

description:
Library name: LID_1070760_PID_10554
dog_id:24317388 precision cohort year 1. dog age at collection:17.4821184120465


title: LID_1070767_PID_10554

description:
Library name: LID_1070767_PID_10554
dog_id:24357306 precision cohort year 1. dog age at collection:10.662616929044


title: LID_1070064_PID_10547

description:
Library name: LID_1070064_PID_10547
dog_id:22498406 precision cohort year 1. dog age at collection:2.42128678986995


title: LID_1070769_PID_10554

description:
Library name: LID_1070769_PID_10554
dog_id:24356486 precision cohort year 1. dog age at collection:13.332192562172


title: LID_1070844_PID_10555

description:
Library name: LID_1070844_PID_10555
dog_id:24592358 precision cohort year 1. dog age at collection:9.04483230663929


title: LID_1070948_PID_10556

description:
Library name: LID_1070948_PID_10556
dog_id:17909060 precision cohort year 1. dog age at collection:2.41885314472583


title: LID_1070768_PID_10554

description:
Library name: LID_1070768_PID_10554
dog_id:24346205 precision cohort year 1. dog age at collection:14.9387405886379


title: LID_1070659_PID_10550

description:
Library name: LID_1070659_PID_10550
dog_id:23534184 precision cohort year 1. dog age at collection:8.67758955053616


title: LID_1070663_PID_10550

description:
Library name: LID_1070663_PID_10550
dog_id:23560867 precision cohort year 1. dog age at collection:1.42741843486197


title: LID_1071976_PID_10567

description:
Library name: LID_1071976_PID_10567
dog_id:25953893 precision cohort year 1. dog age at collection:4.66101984941821


title: LID_1070657_PID_10550

description:
Library name: LID_1070657_PID_10550
dog_id:23533998 precision cohort year 1. dog age at collection:7.51095140314853


title: LID_1071971_PID_10567

description:
Library name: LID_1071971_PID_10567
dog_id:25945169 precision cohort year 1. dog age at collection:15.4889915582934


title: LID_1072005_PID_10567

description:
Library name: LID_1072005_PID_10567
dog_id:26061139 precision cohort year 1. dog age at collection:12.3516997490303


title: LID_1071959_PID_10567

description:
Library name: LID_1071959_PID_10567
dog_id:25898897 precision cohort year 1. dog age at collection:5.14328085785991


title: LID_1071979_PID_10567

description:
Library name: LID_1071979_PID_10567
dog_id:25972889 precision cohort year 1. dog age at collection:4.99526579968058


title: LID_1071998_PID_10567

description:
Library name: LID_1071998_PID_10567
dog_id:26007625 precision cohort year 1. dog age at collection:8.0092687656856


title: LID_1071927_PID_10567

description:
Library name: LID_1071927_PID_10567
dog_id:25680238 precision cohort year 1. dog age at collection:2.16968971024412


title: LID_1071921_PID_10567

description:
Library name: LID_1071921_PID_10567
dog_id:25662919 precision cohort year 1. dog age at collection:6.58588675944939


title: LID_1071923_PID_10567

description:
Library name: LID_1071923_PID_10567
dog_id:25657501 precision cohort year 1. dog age at collection:14.0851015286334


title: LID_1070950_PID_10556

description:
Library name: LID_1070950_PID_10556
dog_id:17738030 precision cohort year 1. dog age at collection:2.66506958704084


title: LID_1071938_PID_10567

description:
Library name: LID_1071938_PID_10567
dog_id:25765556 precision cohort year 1. dog age at collection:12.4529431895962


title: LID_1072007_PID_10567

description:
Library name: LID_1072007_PID_10567
dog_id:26103562 precision cohort year 1. dog age at collection:14.8024564605673


title: LID_1071939_PID_10567

description:
Library name: LID_1071939_PID_10567
dog_id:25806632 precision cohort year 1. dog age at collection:13.1051220625143


title: LID_1071918_PID_10567

description:
Library name: LID_1071918_PID_10567
dog_id:25662691 precision cohort year 1. dog age at collection:14.0847022587269


title: LID_1071932_PID_10567

description:
Library name: LID_1071932_PID_10567
dog_id:25775207 precision cohort year 1. dog age at collection:12.371492128679


title: LID_111259_PID_10499

description:
Library name: LID_111259_PID_10499
dog_id:16079671 precision cohort year 1. dog age at collection:5.64964065708419


title: LID_1071712_PID_10567

description:
Library name: LID_1071712_PID_10567
dog_id:25552786 precision cohort year 1. dog age at collection:3.06772378127614


title: LID_1071707_PID_10567

description:
Library name: LID_1071707_PID_10567
dog_id:25524973 precision cohort year 1. dog age at collection:11.9820898927675


title: LID_1071948_PID_10567

description:
Library name: LID_1071948_PID_10567
dog_id:25851431 precision cohort year 1. dog age at collection:16.3052133242072


title: Slow growing, s5125 chicken, liver tissue

city: Sirius

first: Ivan

last: Yevshin

address: Olympic Ave., 1

country: Russia

institute: Sirius University of Science and Technology

description: Library name: s5125_liver_slow

library_source: transcriptomic

data_processing:
Adapters were detected removed using AdapterRemoval (v2.3.3) in palindromic mode. Trimmed reads were then aligned to the GRCg6a assembly using STAR (v2.7.9a) with parameters allowing for long introns; only uniquely mapped reads were retained for downstream analyses. PCR duplicates were identified and removed using the eight-nucleotide UMIs incorporated during library preparation. Deduplication was performed with UMI-tools (v1.1.4) using parameters -edit-distance-threshold=2 -paired-spliced-is-unique -soft-clip-threshold=1000. Following deduplication, the 5′ ends of aligned reads were used to identify transcription start sites at single-nucleotide resolution using the DPI1 algorithm.
Assembly: GRCg6a
Supplementary files format and content: Bed format with following columns table CAGE_CHICKEN_DEC2022_DPI_ROBUST_v2_GRCg6a
(
string  chrom;          "Reference sequence chromosome or scaffold"
uint    chromStart;     "Start position of feature on chromosome"
uint    chromEnd;       "End position of feature on chromosome"
string  name;           "Stable id of TSS"
uint    score;          "Score (unused)"
char[1] strand;         "+ or - for strand"
uint    version;        "Version of TSS"
uint    summit;         "Offset from chromStart of the main TSS position"
string  type;           "TSS type (promoter/enhancer)"
string  geneSymbol;     "Gene Symbol"
)

molecule: total RNA

organism: Gallus gallus

source_name: liver

extract_protocol:
Total RNA was isolated from sampled tissues using the RNeasy Mini Kit (Qiagen, Hilden, Germany) following the manufacturer’s protocol. RNA concentration and purity were assessed using a NanoPhotometer (Implen), while RNA integrity was evaluated with an Agilent 2100 Bioanalyzer (Agilent Technologies, Santa Clara, CA, USA).
Libraries were prepared using the nAnT-iCAGE protocol with 5 μg of total RNA per sample (nAnT-iCAGE Library Preparation kit DNA form, Yokohama, Japan; SuperScript III Reverse Transcriptase, Invitrogen, Waltham, MA, USA). First-strand cDNA was synthesized and biotinylated at the 5′ end to enable capture of 5′-capped mRNA molecules using streptavidin beads (Dynabeads M-270 Streptavidin, Thermo Fisher Scientific, USA). Capped cDNAs were isolated and treated with RNase I/H to remove residual RNA, followed by purification with RNACleanUP (Beckman Coulter, Brea, CA, USA) and ligation to adapters. The second cDNA strand was then synthesized, unique molecular identifiers (UMIs) were incorporated to enable PCR-duplicate detection, and libraries were PCR-amplified.

value: liver

tag: sample group

value: Slow growing

tag: animal id

value: s5125 chicken


title: LID_1071917_PID_10567

description:
Library name: LID_1071917_PID_10567
dog_id:25628362 precision cohort year 1. dog age at collection:16.9159822039699


title: LID_1071955_PID_10567

description:
Library name: LID_1071955_PID_10567
dog_id:25872113 precision cohort year 1. dog age at collection:0.973382006236216


title: LID_1071708_PID_10567

description:
Library name: LID_1071708_PID_10567
dog_id:25524880 precision cohort year 1. dog age at collection:12.5955966233174


title: LID_1071963_PID_10567

description:
Library name: LID_1071963_PID_10567
dog_id:25898789 precision cohort year 1. dog age at collection:5.14553388090349


title: Slow growing, s5125 chicken, kidney tissue

description: Library name: s5125_kidney_slow

source_name: kidney

value: kidney


title: LID_1071694_PID_10567

description:
Library name: LID_1071694_PID_10567
dog_id:25408285 precision cohort year 1. dog age at collection:11.1305612594114


title: LID_1071670_PID_10567

description:
Library name: LID_1071670_PID_10567
dog_id:25283870 precision cohort year 1. dog age at collection:13.3591622937105


title: LID_1071916_PID_10567

description:
Library name: LID_1071916_PID_10567
dog_id:25628425 precision cohort year 1. dog age at collection:6.16409993155373


title: LID_1071688_PID_10567

description:
Library name: LID_1071688_PID_10567
dog_id:25384891 precision cohort year 1. dog age at collection:15.9572781200091


title: LID_1071667_PID_10567

description:
Library name: LID_1071667_PID_10567
dog_id:25283465 precision cohort year 1. dog age at collection:1.10714693132558


title: Slow growing, s5125 chicken, brain tissue

description: Library name: s5125_brain_slow

source_name: brain

value: brain


title: Slow growing, s5125 chicken, heart tissue

description: Library name: s5125_heart_slow

source_name: heart

value: heart


title: LID_1071668_PID_10567

description:
Library name: LID_1071668_PID_10567
dog_id:25283777 precision cohort year 1. dog age at collection:13.6114533424595


title: LID_1071640_PID_10567

description:
Library name: LID_1071640_PID_10567
dog_id:25203548 precision cohort year 1. dog age at collection:5.2606662103582


title: Slow growing, s5120 chicken, leg tissue

description: Library name: s5120_leg_slow

source_name: leg

value: leg

value: s5120 chicken


title: Slow growing, s5125 chicken, leg tissue

description: Library name: s5125_leg_slow


title: Slow growing, s5120 chicken, heart tissue

description: Library name: s5120_heart_slow


title: LID_1071652_PID_10567

description:
Library name: LID_1071652_PID_10567
dog_id:25704746 precision cohort year 1. dog age at collection:13.0141835881056


title: Slow growing, s5120 chicken, kidney tissue

description: Library name: s5120_kidney_slow


title: Slow growing, s5120 chicken, liver tissue

description: Library name: s5120_liver_slow


title: LID_1071631_PID_10567

description:
Library name: LID_1071631_PID_10567
dog_id:25190780 precision cohort year 1. dog age at collection:3.00504791238877


title: LID_1071630_PID_10567

description:
Library name: LID_1071630_PID_10567
dog_id:25190687 precision cohort year 1. dog age at collection:15.3384668035592


title: Slow growing, s5120 chicken, breast tissue

description: Library name: s5120_breast_slow

source_name: breast

value: breast


title: LID_1071625_PID_10567

description:
Library name: LID_1071625_PID_10567
dog_id:25170746 precision cohort year 1. dog age at collection:5.58082363677846


title: Slow growing, s5120 chicken, brain tissue

description: Library name: s5120_brain_slow


title: Slow growing, s5125 chicken, breast tissue

description: Library name: s5125_breast_slow


title: LID_1071628_PID_10567

description:
Library name: LID_1071628_PID_10567
dog_id:25170839 precision cohort year 1. dog age at collection:11.5028519279033


title: Fast growing, s5118 chicken, leg tissue

description: Library name: s5118_leg_fast

value: Fast growing

value: s5118 chicken


title: LID_1071493_PID_10567

description:
Library name: LID_1071493_PID_10567
dog_id:25002198 precision cohort year 1. dog age at collection:13.383783937942


title: Fast growing, s5118 chicken, kidney tissue

description: Library name: s5118_kidney_fast


title: Fast growing, s5118 chicken, liver tissue

description: Library name: s5118_liver_fast


title: Fast growing, s5118 chicken, heart tissue

description: Library name: s5118_heart_fast


title: LID_1071206_PID_10567

description:
Library name: LID_1071206_PID_10567
dog_id:25111251 precision cohort year 1. dog age at collection:4.48574036048369


title: Fast growing, s5118 chicken, breast tissue

description: Library name: s5118_breast_fast


title: Fast growing, s5118 chicken, brain tissue

description: Library name: s5118_brain_fast


title: LID_1071510_PID_10567

description:
Library name: LID_1071510_PID_10567
dog_id:25121733 precision cohort year 1. dog age at collection:4.05920602327173


title: LID_1071465_PID_10567

description:
Library name: LID_1071465_PID_10567
dog_id:24801175 precision cohort year 1. dog age at collection:16.0884953228382


title: LID_1071457_PID_10567

description:
Library name: LID_1071457_PID_10567
dog_id:24759608 precision cohort year 1. dog age at collection:6.25154004106776


title: Fast growing, s5115 chicken, liver tissue

description: Library name: s5115_liver_fast

value: s5115 chicken


title: LID_1069146_PID_10568

description:
Library name: LID_1069146_PID_10568
dog_id:21821199 precision cohort year 1. dog age at collection:2.39664613278576


title: LID_1069139_PID_10568

description:
Library name: LID_1069139_PID_10568
dog_id:21817365 precision cohort year 1. dog age at collection:1.30971937029432


title: Fast growing, s5115 chicken, leg tissue

description: Library name: s5115_leg_fast


title: Slow growing, s5081 chicken, liver tissue

description: Library name: s5081_liver_slow

value: s5081 chicken


title: LID_1070041_PID_10568

description:
Library name: LID_1070041_PID_10568
dog_id:21123790 precision cohort year 1. dog age at collection:5.46075747205111


title: Fast growing, s5115 chicken, brain tissue

description: Library name: s5115_brain_fast


title: Fast growing, s5115 chicken, kidney tissue

description: Library name: s5115_kidney_fast


title: Fast growing, s5115 chicken, heart tissue

description: Library name: s5115_heart_fast


title: LID_1070087_PID_10568

description:
Library name: LID_1070087_PID_10568
dog_id:22258832 precision cohort year 1. dog age at collection:10.131160164271


title: Fast growing, s5115 chicken, breast tissue

description: Library name: s5115_breast_fast


title: LID_112565_PID_10569

description:
Library name: LID_112565_PID_10569
dog_id:18993500 precision cohort year 1. dog age at collection:4.87168225720587


title: Slow growing, s5081 chicken, heart tissue

description: Library name: s5081_heart_slow


title: Slow growing, s5081 chicken, leg tissue

description: Library name: s5081_leg_slow


title: LID_112368_PID_10569

description:
Library name: LID_112368_PID_10569
dog_id:17731202 precision cohort year 1. dog age at collection:3.31120237280402


title: LID_1072296_PID_10568

description:
Library name: LID_1072296_PID_10568
dog_id:15840919 precision cohort year 1. dog age at collection:3.51089436459046


title: LID_1072299_PID_10568

description:
Library name: LID_1072299_PID_10568
dog_id:16831511 precision cohort year 1. dog age at collection:3.81255228534489


title: LID_1072297_PID_10568

description:
Library name: LID_1072297_PID_10568
dog_id:15860503 precision cohort year 1. dog age at collection:4.59804928131417


title: LID_1069188_PID_10568

description:
Library name: LID_1069188_PID_10568
dog_id:22058708 precision cohort year 1. dog age at collection:13.1837782340862


title: Slow growing, s5081 chicken, kidney tissue

description: Library name: s5081_kidney_slow


title: LID_112543_PID_10569

description:
Library name: LID_112543_PID_10569
dog_id:16498330 precision cohort year 1. dog age at collection:2.58310137653053


title: LID_111226_PID_10569

description:
Library name: LID_111226_PID_10569
dog_id:16117756 precision cohort year 1. dog age at collection:8.5160848733744


title: Slow growing, s5081 chicken, brain tissue

description: Library name: s5081_brain_slow


title: LID_1072298_PID_10568

description:
Library name: LID_1072298_PID_10568
dog_id:15896062 precision cohort year 1. dog age at collection:7.1006160164271


title: Slow growing, s5081 chicken, breast tissue

description: Library name: s5081_breast_slow


title: LID_1067877_PID_10569

description:
Library name: LID_1067877_PID_10569
dog_id:19530594 precision cohort year 1. dog age at collection:11.1996349532284


title: Fast growing, s5077 chicken, liver tissue

description: Library name: s5077_liver_fast

value: s5077 chicken


title: Fast growing, s5077 chicken, leg tissue

description: Library name: s5077_leg_fast


title: Fast growing, s5077 chicken, heart tissue

description: Library name: s5077_heart_fast


title: LID_1072300_PID_10568

description:
Library name: LID_1072300_PID_10568
dog_id:16788712 precision cohort year 1. dog age at collection:11.4185489390828


title: LID_1068345_PID_10569

description:
Library name: LID_1068345_PID_10569
dog_id:20355272 precision cohort year 1. dog age at collection:2.07363677846224


title: LID_1068348_PID_10569

description:
Library name: LID_1068348_PID_10569
dog_id:20354993 precision cohort year 1. dog age at collection:3.24338352726443


title: Fast growing, s5077 chicken, breast tissue

description: Library name: s5077_breast_fast


title: Fast growing, s5077 chicken, kidney tissue

description: Library name: s5077_kidney_fast


title: Slow growing, s5076 chicken, liver tissue

description: Library name: s5076_liver_slow

value: s5076 chicken


title: LID_1068373_PID_10569

description:
Library name: LID_1068373_PID_10569
dog_id:20470019 precision cohort year 1. dog age at collection:2.51174994296144


title: LID_1072303_PID_10568

description:
Library name: LID_1072303_PID_10568
dog_id:17077436 precision cohort year 1. dog age at collection:1.8629363449692


title: LID_1072304_PID_10568

description:
Library name: LID_1072304_PID_10568
dog_id:17021945 precision cohort year 1. dog age at collection:1.86016997490303


title: LID_1072302_PID_10568

description:
Library name: LID_1072302_PID_10568
dog_id:17076068 precision cohort year 1. dog age at collection:5.27706479580196


title: Slow growing, s5076 chicken, leg tissue

description: Library name: s5076_leg_slow


title: LID_1068358_PID_10569

description:
Library name: LID_1068358_PID_10569
dog_id:20383925 precision cohort year 1. dog age at collection:2.91424252794889


title: Fast growing, s5077 chicken, brain tissue

description: Library name: s5077_brain_fast


title: LID_1068350_PID_10569

description:
Library name: LID_1068350_PID_10569
dog_id:20345063 precision cohort year 1. dog age at collection:3.49467640124724


title: LID_1072306_PID_10568

description:
Library name: LID_1072306_PID_10568
dog_id:17477543 precision cohort year 1. dog age at collection:3.19107916951859


title: LID_1068395_PID_10569

description:
Library name: LID_1068395_PID_10569
dog_id:20629967 precision cohort year 1. dog age at collection:1.39222564453571


title: Slow growing, s5076 chicken, breast tissue

description: Library name: s5076_breast_slow


title: Slow growing, s5076 chicken, brain tissue

description: Library name: s5076_brain_slow


title: Slow growing, s5073 chicken, liver tissue

description: Library name: s5073_liver_slow

value: s5073 chicken


title: Slow growing, s5076 chicken, kidney tissue

description: Library name: s5076_kidney_slow


title: LID_1072305_PID_10568

description:
Library name: LID_1072305_PID_10568
dog_id:17481665 precision cohort year 1. dog age at collection:4.68546087154917

value: feces metagenome


title: Slow growing, s5076 chicken, heart tissue

description: Library name: s5076_heart_slow


title: LID_1068385_PID_10569

description:
Library name: LID_1068385_PID_10569
dog_id:20555480 precision cohort year 1. dog age at collection:2.28717012700586


title: Slow growing, s5073 chicken, leg tissue

description: Library name: s5073_leg_slow


title: LID_1072308_PID_10568

description:
Library name: LID_1072308_PID_10568
dog_id:17324213 precision cohort year 1. dog age at collection:1.3320784850559


title: LID_1072307_PID_10568

description:
Library name: LID_1072307_PID_10568
dog_id:17476703 precision cohort year 1. dog age at collection:11.0239942200928


title: Slow growing, s5073 chicken, heart tissue

description: Library name: s5073_heart_slow


title: Slow growing, s5073 chicken, brain tissue

description: Library name: s5073_brain_slow


title: Fast growing, s5068 chicken, liver tissue

description: Library name: s5068_liver_fast

value: liver

value: s5068 chicken


title: Slow growing, s5073 chicken, kidney tissue

description: Library name: s5073_kidney_slow

value: Slow growing


title: LID_1068415_PID_10569

description:
Library name: LID_1068415_PID_10569
dog_id:20869171 precision cohort year 1. dog age at collection:2.50895505361624


title: LID_1068413_PID_10569

description:
Library name: LID_1068413_PID_10569
dog_id:20840329 precision cohort year 1. dog age at collection:3.33915126625599


title: Fast growing, s5068 chicken, breast tissue

description: Library name: s5068_breast_fast


title: Fast growing, s5068 chicken, leg tissue

description: Library name: s5068_leg_fast


title: LID_1068432_PID_10569

description:
Library name: LID_1068432_PID_10569
dog_id:21025288 precision cohort year 1. dog age at collection:14.4460985626283


title: Fast growing, s5068 chicken, kidney tissue

description: Library name: s5068_kidney_fast

value: kidney


title: LID_1072310_PID_10568

description:
Library name: LID_1072310_PID_10568
dog_id:17476796 precision cohort year 1. dog age at collection:2.68714350901209


title: LID_1068947_PID_10569

description:
Library name: LID_1068947_PID_10569
dog_id:21450619 precision cohort year 1. dog age at collection:3.67276979237965


title: Fast growing, s5068 chicken, brain tissue

description: Library name: s5068_brain_fast

value: brain


title: Slow growing, s5073 chicken, breast tissue

description: Library name: s5073_breast_slow


title: Fast growing, s5068 chicken, heart tissue

description: Library name: s5068_heart_fast

value: heart


title: LID_1072311_PID_10568

description:
Library name: LID_1072311_PID_10568
dog_id:17505356 precision cohort year 1. dog age at collection:10.607517681953


title: LID_1068963_PID_10569

description:
Library name: LID_1068963_PID_10569
dog_id:21435970 precision cohort year 1. dog age at collection:5.54817856871245


title: Fast growing, s5064 chicken, breast tissue

description: Library name: s5064_breast_fast

value: s5064 chicken


title: Fast growing, s5064 chicken, heart tissue

description: Library name: s5064_heart_fast


title: LID_1072316_PID_10568

description:
Library name: LID_1072316_PID_10568
dog_id:17612147 precision cohort year 1. dog age at collection:1.21426534337212


title: Fast growing, s5064 chicken, leg tissue

description: Library name: s5064_leg_fast

value: leg


title: LID_1072313_PID_10568

description:
Library name: LID_1072313_PID_10568
dog_id:17606495 precision cohort year 1. dog age at collection:6.9609285877253


title: LID_1072312_PID_10568

description:
Library name: LID_1072312_PID_10568
dog_id:17524607 precision cohort year 1. dog age at collection:10.3585728952772


title: Fast growing, s5064 chicken, kidney tissue

description: Library name: s5064_kidney_fast


title: LID_1072315_PID_10568

description:
Library name: LID_1072315_PID_10568
dog_id:17673065 precision cohort year 1. dog age at collection:5.46375199634953


title: Fast growing, s5064 chicken, liver tissue

description: Library name: s5064_liver_fast


title: Fast growing, s5064 chicken, brain tissue

description: Library name: s5064_brain_fast


title: LID_1070038_PID_10569

description:
Library name: LID_1070038_PID_10569
dog_id:21069814 precision cohort year 1. dog age at collection:1.78370978781656


title: LID_1072320_PID_10568

description:
Library name: LID_1072320_PID_10568
dog_id:17583155 precision cohort year 1. dog age at collection:2.9609285877253


title: Slow growing, s5061 chicken, liver tissue

description: Library name: s5061_liver_slow

value: s5061 chicken


title: LID_1072323_PID_10568

description:
Library name: LID_1072323_PID_10568
dog_id:17819285 precision cohort year 1. dog age at collection:5.41427104722793


title: LID_1072322_PID_10568

description:
Library name: LID_1072322_PID_10568
dog_id:17882699 precision cohort year 1. dog age at collection:7.51676933607118


title: Slow growing, s5061 chicken, leg tissue

description: Library name: s5061_leg_slow


title: LID_1072324_PID_10568

description:
Library name: LID_1072324_PID_10568
dog_id:17868149 precision cohort year 1. dog age at collection:5.09936116814967


title: Slow growing, s5061 chicken, kidney tissue

description: Library name: s5061_kidney_slow


title: LID_1072326_PID_10568

description:
Library name: LID_1072326_PID_10568
dog_id:17858804 precision cohort year 1. dog age at collection:1.34256217202829


title: Slow growing, s5061 chicken, breast tissue

description: Library name: s5061_breast_slow

value: breast


title: Slow growing, s5061 chicken, brain tissue

description: Library name: s5061_brain_slow


title: Fast growing, s5056 chicken, liver tissue

description: Library name: s5056_liver_fast

value: Fast growing

value: s5056 chicken


title: LID_1072325_PID_10568

description:
Library name: LID_1072325_PID_10568
dog_id:17860310 precision cohort year 1. dog age at collection:7.18238078941364


title: LID_1072332_PID_10568

description:
Library name: LID_1072332_PID_10568
dog_id:18883541 precision cohort year 1. dog age at collection:6.89504905315994


title: Fast growing, s5056 chicken, kidney tissue

description: Library name: s5056_kidney_fast


title: Fast growing, s5056 chicken, breast tissue

description: Library name: s5056_breast_fast


title: LID_1070911_PID_10569

description:
Library name: LID_1070911_PID_10569
dog_id:15741859 precision cohort year 1. dog age at collection:4.3952772073922


title: Fast growing, s5056 chicken, brain tissue

description: Library name: s5056_brain_fast


title: Fast growing, s5056 chicken, heart tissue

description: Library name: s5056_heart_fast


title: LID_1072335_PID_10568

description:
Library name: LID_1072335_PID_10568
dog_id:18744347 precision cohort year 1. dog age at collection:4.11419119324663


title: LID_1070922_PID_10569

description:
Library name: LID_1070922_PID_10569
dog_id:17901716 precision cohort year 1. dog age at collection:10.0193931097422


title: Fast growing, s5056 chicken, leg tissue

description: Library name: s5056_leg_fast


title: Slow growing, s5044 chicken, liver tissue

description: Library name: s5044_liver_slow

value: s5044 chicken


title: LID_1072334_PID_10568

description:
Library name: LID_1072334_PID_10568
dog_id:18761828 precision cohort year 1. dog age at collection:2.20516769336071


title: LID_1072337_PID_10568

description:
Library name: LID_1072337_PID_10568
dog_id:18726404 precision cohort year 1. dog age at collection:7.86091147615788


title: Slow growing, s5044 chicken, leg tissue

description: Library name: s5044_leg_slow


title: Slow growing, s5061 chicken, heart tissue

description: Library name: s5061_heart_slow


title: Slow growing, s5044 chicken, heart tissue

description: Library name: s5044_heart_slow


title: LID_1072328_PID_10568

description:
Library name: LID_1072328_PID_10568
dog_id:18694583 precision cohort year 1. dog age at collection:2.35316373868735


title: LID_1072331_PID_10568

description:
Library name: LID_1072331_PID_10568
dog_id:18817808 precision cohort year 1. dog age at collection:2.62930641113393


title: Slow growing, s5044 chicken, breast tissue

description: Library name: s5044_breast_slow


title: Slow growing, s5044 chicken, kidney tissue

description: Library name: s5044_kidney_slow


title: LID_1071181_PID_10569

description:
Library name: LID_1071181_PID_10569
dog_id:24920289 precision cohort year 1. dog age at collection:4.53516427104723


title: Slow growing, s5044 chicken, brain tissue

description: Library name: s5044_brain_slow


title: LID_1071165_PID_10569

description:
Library name: LID_1071165_PID_10569
dog_id:24820218 precision cohort year 1. dog age at collection:7.59337211955282


title: Fast growing, s5042 chicken, leg tissue

description: Library name: s5042_leg_fast

value: s5042 chicken


title: Fast growing, s5042 chicken, liver tissue

description: Library name: s5042_liver_fast


title: Fast growing, s5042 chicken, kidney tissue

description: Library name: s5042_kidney_fast


title: LID_1071329_PID_10569

description:
Library name: LID_1071329_PID_10569
dog_id:24687394 precision cohort year 1. dog age at collection:5.8796011103506


title: Fast growing, s5042 chicken, heart tissue

description: Library name: s5042_heart_fast


title: Fast growing, s5042 chicken, breast tissue

description: Library name: s5042_breast_fast


title: LID_1072347_PID_10568

description:
Library name: LID_1072347_PID_10568
dog_id:14086402 precision cohort year 1. dog age at collection:5.65508783937942


title: LID_1072345_PID_10568

description:
Library name: LID_1072345_PID_10568
dog_id:18926276 precision cohort year 1. dog age at collection:6.31473876340406


title: LID_1071434_PID_10569

description:
Library name: LID_1071434_PID_10569
dog_id:24721700 precision cohort year 1. dog age at collection:14.0571241159023


title: Slow growing, s5019 chicken, liver tissue

description: Library name: s5019_liver_slow

value: s5019 chicken


title: LID_1070936_PID_10569

description:
Library name: LID_1070936_PID_10569
dog_id:15518299 precision cohort year 1. dog age at collection:4.91027834816336


title: LID_1072348_PID_10568

description:
Library name: LID_1072348_PID_10568
dog_id:14094304 precision cohort year 1. dog age at collection:7.8214788196821


title: Slow growing, s5019 chicken, leg tissue

description: Library name: s5019_leg_slow


title: LID_1072349_PID_10568

description:
Library name: LID_1072349_PID_10568
dog_id:13991830 precision cohort year 1. dog age at collection:5.30430070727812


title: Slow growing, s5019 chicken, kidney tissue

description: Library name: s5019_kidney_slow


title: Slow growing, s5019 chicken, heart tissue

description: Library name: s5019_heart_slow


title: LID_1071436_PID_10569

description:
Library name: LID_1071436_PID_10569
dog_id:24707354 precision cohort year 1. dog age at collection:9.90731234314397


title: LID_1072339_PID_10568

description:
Library name: LID_1072339_PID_10568
dog_id:18726497 precision cohort year 1. dog age at collection:3.69164955509925


title: LID_1072343_PID_10568

description:
Library name: LID_1072343_PID_10568
dog_id:18732284 precision cohort year 1. dog age at collection:2.19421629021218


title: LID_1072352_PID_10568

description:
Library name: LID_1072352_PID_10568
dog_id:14170075 precision cohort year 1. dog age at collection:11.8093771389459


title: Slow growing, s5019 chicken, brain tissue

description: Library name: s5019_brain_slow


title: LID_1072355_PID_10568

description:
Library name: LID_1072355_PID_10568
dog_id:15217507 precision cohort year 1. dog age at collection:3.4207164042893


title: Fast growing, s5011 chicken, leg tissue

description: Library name: s5011_leg_fast

value: s5011 chicken


title: Slow growing, s5019 chicken, breast tissue

description: Library name: s5019_breast_slow


title: LID_1072354_PID_10568

description:
Library name: LID_1072354_PID_10568
dog_id:13770970 precision cohort year 1. dog age at collection:5.18423454255076

value: feces metagenome


title: Fast growing, s5011 chicken, brain tissue

description: Library name: s5011_brain_fast


title: Fast growing, s5011 chicken, liver tissue

description: Library name: s5011_liver_fast

value: liver


title: LID_1072356_PID_10568

description:
Library name: LID_1072356_PID_10568
dog_id:15443518 precision cohort year 1. dog age at collection:3.39867100159708


title: LID_1072309_PID_10568

description:
Library name: LID_1072309_PID_10568
dog_id:17324399 precision cohort year 1. dog age at collection:2.66775039926991


title: LID_1071449_PID_10569

description:
Library name: LID_1071449_PID_10569
dog_id:24721793 precision cohort year 1. dog age at collection:0.99243288463001


title: LID_1072338_PID_10568

description:
Library name: LID_1072338_PID_10568
dog_id:18733391 precision cohort year 1. dog age at collection:6.11192866377671


title: Fast growing, s5011 chicken, kidney tissue

description: Library name: s5011_kidney_fast


title: Fast growing, s5011 chicken, heart tissue

description: Library name: s5011_heart_fast


title: LID_1071454_PID_10569

description:
Library name: LID_1071454_PID_10569
dog_id:24753547 precision cohort year 1. dog age at collection:2.24891626739676


title: Fast growing, s5011 chicken, breast tissue

description: Library name: s5011_breast_fast


title: LID_1071459_PID_10569

description:
Library name: LID_1071459_PID_10569
dog_id:24772715 precision cohort year 1. dog age at collection:7.65679899612138


title: LID_1071464_PID_10569

description:
Library name: LID_1071464_PID_10569
dog_id:24801058 precision cohort year 1. dog age at collection:11.4208304814054


title: LID_1072358_PID_10568

description:
Library name: LID_1072358_PID_10568
dog_id:18442814 precision cohort year 1. dog age at collection:2.71478819682105


title: LID_1070944_PID_10569

description:
Library name: LID_1070944_PID_10569
dog_id:19159242 precision cohort year 1. dog age at collection:3.28410905772302


title: Fast growing, s5009 chicken, breast tissue

description: Library name: s5009_breast_fast

value: s5009 chicken


title: LID_1071487_PID_10569

description:
Library name: LID_1071487_PID_10569
dog_id:24932829 precision cohort year 1. dog age at collection:12.8666438512434


title: Slow growing, s4992 chicken, liver tissue

description: Library name: s4992_liver_slow

value: Slow growing

value: s4992 chicken


title: LID_1072368_PID_10568

description:
Library name: LID_1072368_PID_10568
dog_id:17730167 precision cohort year 1. dog age at collection:4.30869267624914


title: Slow growing, s4992 chicken, brain tissue

description: Library name: s4992_brain_slow

value: brain


title: LID_1071491_PID_10569

description:
Library name: LID_1071491_PID_10569
dog_id:24991518 precision cohort year 1. dog age at collection:13.2168282759145


title: LID_1072366_PID_10568

description:
Library name: LID_1072366_PID_10568
dog_id:17795387 precision cohort year 1. dog age at collection:6.60220358962659


title: Slow growing, s4992 chicken, kidney tissue

description: Library name: s4992_kidney_slow

value: kidney


title: LID_1072370_PID_10568

description:
Library name: LID_1072370_PID_10568
dog_id:17776697 precision cohort year 1. dog age at collection:2.99650163510533


title: LID_1071498_PID_10569

description:
Library name: LID_1071498_PID_10569
dog_id:25058205 precision cohort year 1. dog age at collection:13.9263061829797


title: Slow growing, s4992 chicken, breast tissue

description: Library name: s4992_breast_slow


title: LID_1072367_PID_10568

description:
Library name: LID_1072367_PID_10568
dog_id:17744549 precision cohort year 1. dog age at collection:3.0700148300251


title: Slow growing, s4959 chicken, liver tissue

description: Library name: s4959_liver_slow

value: s4959 chicken


title: LID_1071470_PID_10569

description:
Library name: LID_1071470_PID_10569
dog_id:24820125 precision cohort year 1. dog age at collection:7.8067913909803


title: Slow growing, s4959 chicken, leg tissue

description: Library name: s4959_leg_slow

value: leg


title: LID_1072373_PID_10568

description:
Library name: LID_1072373_PID_10568
dog_id:17744456 precision cohort year 1. dog age at collection:4.06719142140087


title: Slow growing, s4959 chicken, kidney tissue

description: Library name: s4959_kidney_slow


title: LID_1072359_PID_10568

description:
Library name: LID_1072359_PID_10568
dog_id:18451190 precision cohort year 1. dog age at collection:1.13192828351966


title: Slow growing, s4959 chicken, heart tissue

description: Library name: s4959_heart_slow

value: heart


title: Fast growing, s5009 chicken, heart tissue

description: Library name: s5009_heart_fast


title: LID_1071475_PID_10569

description:
Library name: LID_1071475_PID_10569
dog_id:24861803 precision cohort year 1. dog age at collection:4.18748574036048


title: Fast growing, s5009 chicken, leg tissue

description: Library name: s5009_leg_fast


title: Slow growing, s4959 chicken, breast tissue

description: Library name: s4959_breast_slow

value: breast


title: LID_1072379_PID_10568

description:
Library name: LID_1072379_PID_10568
dog_id:17706722 precision cohort year 1. dog age at collection:4.389858544376


title: LID_1072376_PID_10568

description:
Library name: LID_1072376_PID_10568
dog_id:17625890 precision cohort year 1. dog age at collection:4.04811202372804


title: LID_1072362_PID_10568

description:
Library name: LID_1072362_PID_10568
dog_id:18618518 precision cohort year 1. dog age at collection:4.25564681724846


title: Slow growing, s4959 chicken, brain tissue

description: Library name: s4959_brain_slow


title: Fast growing, s5009 chicken, liver tissue

description: Library name: s5009_liver_fast

value: Fast growing


title: LID_1072383_PID_10568

description:
Library name: LID_1072383_PID_10568
dog_id:19429389 precision cohort year 1. dog age at collection:1.2662559890486


title: Fast growing, s4947 chicken, liver tissue

description: Library name: s4947_liver_fast

value: s4947 chicken


title: Fast growing, s5009 chicken, brain tissue

description: Library name: s5009_brain_fast


title: LID_1071519_PID_10569

description:
Library name: LID_1071519_PID_10569
dog_id:25124166 precision cohort year 1. dog age at collection:6.18881664004867


title: LID_1071511_PID_10569

description:
Library name: LID_1071511_PID_10569
dog_id:25121913 precision cohort year 1. dog age at collection:3.31998631074606


title: LID_1072382_PID_10568

description:
Library name: LID_1072382_PID_10568
dog_id:19398441 precision cohort year 1. dog age at collection:6.42847364818617


title: Fast growing, s4947 chicken, heart tissue

description: Library name: s4947_heart_fast


title: Fast growing, s4947 chicken, leg tissue

description: Library name: s4947_leg_fast


title: LID_1071520_PID_10569

description:
Library name: LID_1071520_PID_10569
dog_id:25137261 precision cohort year 1. dog age at collection:12.7381644992015


title: Fast growing, s4947 chicken, kidney tissue

description: Library name: s4947_kidney_fast


title: LID_111938_PID_10571

description:
Library name: LID_111938_PID_10571
dog_id:17324027 precision cohort year 1. dog age at collection:3.91917636322154


title: Fast growing, s4947 chicken, breast tissue

description: Library name: s4947_breast_fast


title: Fast growing, s4947 chicken, brain tissue

description: Library name: s4947_brain_fast


title: Slow growing, s4992 chicken, leg tissue

description: Library name: s4992_leg_slow


title: Fast growing, s4928 chicken, liver tissue

description: Library name: s4928_liver_fast

value: s4928 chicken


title: LID_1072384_PID_10568

description:
Library name: LID_1072384_PID_10568
dog_id:19411857 precision cohort year 1. dog age at collection:8.84434747889573


title: Fast growing, s5009 chicken, kidney tissue

description: Library name: s5009_kidney_fast


title: LID_1071521_PID_10569

description:
Library name: LID_1071521_PID_10569
dog_id:25137354 precision cohort year 1. dog age at collection:2.40782569016655


title: LID_112490_PID_10571

description:
Library name: LID_112490_PID_10571
dog_id:14161618 precision cohort year 1. dog age at collection:2.25741501254848


title: Fast growing, s5042 chicken, brain tissue

description: Library name: s5042_brain_fast

value: s5042 chicken


title: LID_1072360_PID_10568

description:
Library name: LID_1072360_PID_10568
dog_id:18444302 precision cohort year 1. dog age at collection:3.45927446954141


title: LID_1069162_PID_10571

description:
Library name: LID_1069162_PID_10571
dog_id:21877791 precision cohort year 1. dog age at collection:13.9121035820214


title: Fast growing, s4928 chicken, breast tissue

description: Library name: s4928_breast_fast


title: Fast growing, s4928 chicken, brain tissue

description: Library name: s4928_brain_fast


title: LID_1069163_PID_10571

description:
Library name: LID_1069163_PID_10571
dog_id:21878070 precision cohort year 1. dog age at collection:11.2672826830938


title: Fast growing, s4928 chicken, heart tissue

description: Library name: s4928_heart_fast


title: LID_1072388_PID_10568

description:
Library name: LID_1072388_PID_10568
dog_id:19316682 precision cohort year 1. dog age at collection:6.3130276066621


title: LID_1071639_PID_10569

description:
Library name: LID_1071639_PID_10569
dog_id:25203422 precision cohort year 1. dog age at collection:6.50909765001141


title: Slow growing, s4916 chicken, liver tissue

description: Library name: s4916_liver_slow

value: s4916 chicken


title: Slow growing, s4916 chicken, kidney tissue

description: Library name: s4916_kidney_slow


title: Slow growing, s4916 chicken, breast tissue

description: Library name: s4916_breast_slow


title: Slow growing, s4906 chicken, breast tissue

description: Library name: s4906_breast_slow

value: s4906 chicken


title: LID_1071682_PID_10571

description:
Library name: LID_1071682_PID_10571
dog_id:25343783 precision cohort year 1. dog age at collection:14.7035135751768

value: feces metagenome


title: Slow growing, s4916 chicken, heart tissue

description: Library name: s4916_heart_slow


title: LID_1072584_PID_10569

description:
Library name: LID_1072584_PID_10569
dog_id:16179712 precision cohort year 1. dog age at collection:4.672199406799


title: Slow growing, s4916 chicken, brain tissue

description: Library name: s4916_brain_slow


title: Slow growing, s4906 chicken, liver tissue

description: Library name: s4906_liver_slow

value: liver


title: LID_1072685_PID_10569

description:
Library name: LID_1072685_PID_10569
dog_id:18169481 precision cohort year 1. dog age at collection:1.1645657464446


title: Slow growing, s4906 chicken, kidney tissue

description: Library name: s4906_kidney_slow


title: LID_1072496_PID_10568

description:
Library name: LID_1072496_PID_10568
dog_id:26128690 precision cohort year 1. dog age at collection:2.96646132785763


title: Slow growing, s4906 chicken, leg tissue

description: Library name: s4906_leg_slow


title: LID_1071328_PID_10571

description:
Library name: LID_1071328_PID_10571
dog_id:24664250 precision cohort year 1. dog age at collection:15.8970454026922


title: LID_1072365_PID_10568

description:
Library name: LID_1072365_PID_10568
dog_id:17727998 precision cohort year 1. dog age at collection:10.886930565062


title: LID_1071692_PID_10569

description:
Library name: LID_1071692_PID_10569
dog_id:25408429 precision cohort year 1. dog age at collection:3.21547265951783


title: Fast growing, s4928 chicken, leg tissue

description: Library name: s4928_leg_fast


title: LID_1071683_PID_10569

description:
Library name: LID_1071683_PID_10569
dog_id:25343888 precision cohort year 1. dog age at collection:15.2153775952544


title: LID_1072390_PID_10568

description:
Library name: LID_1072390_PID_10568
dog_id:17094920 precision cohort year 1. dog age at collection:3.61253707506274


title: Slow growing, s4906 chicken, heart tissue

description: Library name: s4906_heart_slow


title: LID_1071651_PID_10569

description:
Library name: LID_1071651_PID_10569
dog_id:25704839 precision cohort year 1. dog age at collection:2.26549547494106


title: LID_1072493_PID_10568

description:
Library name: LID_1072493_PID_10568
dog_id:26128597 precision cohort year 1. dog age at collection:5.80544147843943


title: LID_1072522_PID_10571

description:
Library name: LID_1072522_PID_10571
dog_id:26328064 precision cohort year 1. dog age at collection:2.41855844550916


title: Slow growing, s4906 chicken, brain tissue

description: Library name: s4906_brain_slow


title: Fast growing, s4928 chicken, kidney tissue

description: Library name: s4928_kidney_fast


title: LID_1072589_PID_10571

description:
Library name: LID_1072589_PID_10571
dog_id:16412851 precision cohort year 1. dog age at collection:3.47815423226101


title: Fast growing, s4900 chicken, liver tissue

description: Library name: s4900_liver_fast

value: s4900 chicken


title: LID_1072593_PID_10571

description:
Library name: LID_1072593_PID_10571
dog_id:15932254 precision cohort year 1. dog age at collection:6.6129363449692


title: Fast growing, s4900 chicken, leg tissue

description: Library name: s4900_leg_fast


title: LID_1072594_PID_10571

description:
Library name: LID_1072594_PID_10571
dog_id:16831604 precision cohort year 1. dog age at collection:2.39393680127766


title: Fast growing, s4900 chicken, heart tissue

description: Library name: s4900_heart_fast


title: LID_1072595_PID_10571

description:
Library name: LID_1072595_PID_10571
dog_id:16897682 precision cohort year 1. dog age at collection:3.08127994524298


title: Fast growing, s4900 chicken, kidney tissue

description: Library name: s4900_kidney_fast


title: LID_1072601_PID_10571

description:
Library name: LID_1072601_PID_10571
dog_id:17098610 precision cohort year 1. dog age at collection:6.86481861738535


title: Slow growing, s4992 chicken, heart tissue

description: Library name: s4992_heart_slow

value: Slow growing


title: LID_1072607_PID_10571

description:
Library name: LID_1072607_PID_10571
dog_id:14110990 precision cohort year 1. dog age at collection:2.07688797627196


title: A1

city: Chongqing

first: shan

last: chen

address: No. 439, Xuanhua Road, Yongchuan District

department: Yongchuan Hospital

country: China

institute: Chongqing Medical University

description:
Library name: A1
control, replicate biosample 1

data_processing:
CLC Genomics Workbench v 11.0.1
Sequence reads were trimmed for adaptor sequence/low-quality sequence using CLC genomic benchwork (parameter- Quality limit: 0.05)
Trimmed sequence reads were mapped to hg38  using CLC genomic benchwork (parameters- mismath cost: 2 insertion cost: 3 deletion cost: 3 length fraction: 0.8 similarity fraction: 0.8)
Read count extraction and normalization were performed using CLC genomic benchwork
Assembly: hg38
Supplementary files format and content: tab-delimited text files include FPKM value and gene count for each Sample

organism: Homo sapiens

source_name: cell culture

extract_protocol:
RNA was extracted from cell culture using TRIzol reagent. Briefly, cell were washed with PBS, lysed in TRIzol, and incubated for 5 min. Chloroform (20% volume) was added, followed by vigorous mixing and centrifugation (12,000 ×g, 15 min, 4°C) to separate phases. The aqueous layer was collected, mixed with isopropanol, and centrifuged (12,000 ×g, 10 min) to precipitate RNA. The pellet was washed twice with 75% ethanol, air-dried, and dissolved in RNase-free water. RNA concentration and integrity (RIN >7) were assessed using Nanodrop and Bioanalyzer. Samples were stored at -80°C to prevent degradation. This method ensures high-quality RNA for transcriptomic analyses such as RNA-seq or qPCR.
Total RNA (1 µg, RIN >7) was enriched for mRNA using poly(A) selection (for eukaryotes) or rRNA depletion (for prokaryotes). The RNA was fragmented (∼200–300 nt) and reverse-transcribed into cDNA using random hexamers and SuperScript IV. Second-strand synthesis was performed with dUTP incorporation (strand-specific libraries). The cDNA was end-repaired, A-tailed, and ligated to Illumina-compatible adapters. Post-ligation cleanup (AMPure XP beads) was followed by size selection (200–500 bp) and uracil digestion (for strand specificity). Library amplification (8–12 cycles) used indexed primers, and final quantification (Qubit) and quality control (Bioanalyzer/TapeStation) ensured optimal fragment size (∼300 bp) and concentration (>10 nM). Libraries were pooled and sequenced (Illumina platforms, 150 bp paired-end).

value: cell culture

tag: cell line

tag: treatment

value: control


title: LID_1072603_PID_10571

description:
Library name: LID_1072603_PID_10571
dog_id:15787834 precision cohort year 1. dog age at collection:11.0735797399042


title: LID_1072602_PID_10571

description:
Library name: LID_1072602_PID_10571
dog_id:15632440 precision cohort year 1. dog age at collection:9.36744239105635


title: LID_1072613_PID_10571

description:
Library name: LID_1072613_PID_10571
dog_id:17967005 precision cohort year 1. dog age at collection:5.1182694501483


title: LID_1072599_PID_10571

description:
Library name: LID_1072599_PID_10571
dog_id:17324306 precision cohort year 1. dog age at collection:1.83561487565594


title: Slow growing, s4916 chicken, leg tissue

description: Library name: s4916_leg_slow


title: THP-1-3

description:
Library name: THP-1-3
Pristimerin treatment, replicate biosample 3

value: Pristimerin


title: LID_1072614_PID_10571

description:
Library name: LID_1072614_PID_10571
dog_id:17730074 precision cohort year 1. dog age at collection:4.2312913529546


title: Fast growing, s4900 chicken, breast tissue

description: Library name: s4900_breast_fast


title: LID_1072598_PID_10571

description:
Library name: LID_1072598_PID_10571
dog_id:17315075 precision cohort year 1. dog age at collection:2.75211042664841


title: LID_1072596_PID_10571

description:
Library name: LID_1072596_PID_10571
dog_id:16704391 precision cohort year 1. dog age at collection:3.03753137120694


title: THP-1-2

description:
Library name: THP-1-2
Pristimerin treatment, replicate biosample 2


title: A2

description:
Library name: A2
control, replicate biosample 2


title: THP-1-1

description:
Library name: THP-1-1
Pristimerin treatment, replicate biosample 1


title: LID_1072616_PID_10571

description:
Library name: LID_1072616_PID_10571
dog_id:17245457 precision cohort year 1. dog age at collection:1.73418510913377


title: Fast growing, s4900 chicken, brain tissue

description: Library name: s4900_brain_fast

value: brain


title: LID_1072391_PID_10568

description:
Library name: LID_1072391_PID_10568
dog_id:17142158 precision cohort year 1. dog age at collection:2.71492128678987


title: A3

description:
Library name: A3
control, replicate biosample 3


title: MHCC97-H cells, CFZ1, 16h

city: XI'AN

first: MENGJIAO

last: SHI

state: Shaanxi Province

address: Building C, Shengyuan Square

institute: The Second Affiliated Hospital of Xi 'an Jiaotong University

description: Library name: Sample3

data_processing:
Raw paired-end reads were trimmed and quality controlled using fastp with default parameters.
Assembly: Homo sapiens GRCh38 release-109
Supplementary files format and content: The xlsx file includes raw counts for each sample

molecule: polyA RNA

growth_protocol: MHCC97-H cells were maintained in DMEM supplemented with 10% fetalbovine serum (FBS) and antibiotics inhumidified atmosphere with 5% CO2 at 37℃.

extract_protocol:
RNA was harvested using Rneasy mini plus kit (Qiagen).1ug of total RNA was used for the construction of sequencing libraries.
RNA libraries for RNA-seq were prepared using Illumina TruseqTM RNA sample prep Kit following manufacturer's protocols.

treatment_protocol: Wild-type MHCC97-H cells treated with clofazimine(CFZ) for 16 hours.

value: MHCC97-H cells

tag: cell type

value: hepatocellular carcinoma

tag: genotype

value: WT

value: Clofazimine (CFZ,40μM) treatment for 16 h


title: MHCC97-H cells, Wildtype2, 16h

description: Library name: Sample2

value: no treatment


title: MHCC97-H cells, CFZ2, 16h

description: Library name: Sample4


title: LID_1072617_PID_10571

description:
Library name: LID_1072617_PID_10571
dog_id:17481017 precision cohort year 1. dog age at collection:2.43759981747661


title: MHCC97-H cells, Wildtype1, 16h

description: Library name: Sample1


title: LID_1072619_PID_10571

description:
Library name: LID_1072619_PID_10571
dog_id:19280304 precision cohort year 1. dog age at collection:3.30835044490075


title: MHCC97-H cells, MLT2, 16h

description: Library name: Sample6

treatment_protocol: Wild-type MHCC97-H cells treated with chloroquine (CQ) and melatonin (MLT) for 16 hours.

value: melatonin (MLT, 0.2 mM) treatment for 16 h


title: LID_1072620_PID_10571

description:
Library name: LID_1072620_PID_10571
dog_id:19257423 precision cohort year 1. dog age at collection:4.05589778690395


title: LID_1072622_PID_10571

description:
Library name: LID_1072622_PID_10571
dog_id:19274952 precision cohort year 1. dog age at collection:9.30994752452658


title: MHCC97-H cells, MLT1, 16h

description: Library name: Sample5


title: LID_1072625_PID_10571

description:
Library name: LID_1072625_PID_10571
dog_id:19556789 precision cohort year 1. dog age at collection:2.95274355464294


title: MHCC97-H cells, CQ2, 16h

description: Library name: Sample4

value: chloroquine (CQ, 40 μM) treatment for 16 h


title: LID_1072623_PID_10571

description:
Library name: LID_1072623_PID_10571
dog_id:19560884 precision cohort year 1. dog age at collection:10.8685261236596


title: MHCC97-H cells, CQ1, 16h

description: Library name: Sample3


title: LID_1072627_PID_10571

description:
Library name: LID_1072627_PID_10571
dog_id:19548683 precision cohort year 1. dog age at collection:8.36824093086927


title: LID_1072626_PID_10571

description:
Library name: LID_1072626_PID_10571
dog_id:19548869 precision cohort year 1. dog age at collection:2.45164080918701


title: LID_1072512_PID_10568

description:
Library name: LID_1072512_PID_10568
dog_id:26169568 precision cohort year 1. dog age at collection:3.14670317134383


title: LID_1072628_PID_10571

description:
Library name: LID_1072628_PID_10571
dog_id:19577888 precision cohort year 1. dog age at collection:4.37896417978554


title: LID_1072632_PID_10571

description:
Library name: LID_1072632_PID_10571
dog_id:19623677 precision cohort year 1. dog age at collection:1.30238991558293


title: MHCC97-H cells, WT2, 16h

description: Library name: Sample2


title: LID_1072631_PID_10571

description:
Library name: LID_1072631_PID_10571
dog_id:19623584 precision cohort year 1. dog age at collection:3.38797627195984


title: 4IA_rep3

city: Chicago

first: Francisco

last: Silva

state: Illinois

address: 420 E Superior street #9

department: Microbiology-Immunology

institute: Northwestern University

description:
Library name: Sample 48
Column name in raw_counts.txt: 4IA_rep3
Correspondence to fastq: ARMD_03

data_processing:
Assembly: Filtered reads were aligned to the human reference genome UCSC hg38
Raw sequencing reads were quality-checked and trimmed to remove adapters and low-quality bases. Reads were aligned to the human reference genome, and gene-level counts were generated. Differential gene expression analysis was performed using standard statistical methods in R with an adjusted p-value < 0.05 and |log2 fold-change| ≥ 1.
Supplementary files format and content: Tab-delimited text files containing gene-level raw counts for all samples (raw_counts.txt) and corresponding sample metadata (Column_data.txt), including sample identifiers, conditions, and biological replicates.

extract_protocol:
Total RNA was extracted from intestinal epithelial cells following 110 minutes of infection with Vibrio vulnificus strains or PBS control. Cells were lysed and RNA was isolated using a standard column-based RNA purification method according to the manufacturer’s instructions.
RNA-seq libraries were prepared from total RNA using a poly(A) selection protocol to enrich for mRNA, followed by fragmentation, cDNA synthesis, adapter ligation, and PCR amplification according to the manufacturer’s instructions.

value: Human Intestinal epithelial cells (IECs)

value: Wild type

value: Vibrio vulnificus intoxication

tag: group


title: A_rep3

description:
Library name: Sample 45
Column name in raw_counts.txt: A_rep3
Correspondence to fastq: DRM_03

value: A


title: LID_1072694_PID_10569

description:
Library name: LID_1072694_PID_10569
dog_id:18209159 precision cohort year 1. dog age at collection:3.34393299870713

value: feces metagenome


title: 4IA_rep2

description:
Library name: Sample 47
Column name in raw_counts.txt: 4IA_rep2
Correspondence to fastq: ARMD_02


title: 4IA_rep1

description:
Library name: Sample 46
Column name in raw_counts.txt: 4IA_rep1
Correspondence to fastq: ARMD_01


title: ARM_rep2

description:
Library name: Sample 41
Column name in raw_counts.txt: ARM_rep2
Correspondence to fastq: DUF_02

value: ARM


title: LID_1072636_PID_10571

description:
Library name: LID_1072636_PID_10571
dog_id:19886318 precision cohort year 1. dog age at collection:3.42060232717317


title: ARM_rep3

description:
Library name: Sample 42
Column name in raw_counts.txt: ARM_rep3
Correspondence to fastq: DUF_03


title: ARM_rep1

description:
Library name: Sample 40
Column name in raw_counts.txt: ARM_rep1
Correspondence to fastq: DUF_01


title: LID_1072696_PID_10569

description:
Library name: LID_1072696_PID_10569
dog_id:18219677 precision cohort year 1. dog age at collection:5.83812457221081


title: LID_1072689_PID_10569

description:
Library name: LID_1072689_PID_10569
dog_id:18241487 precision cohort year 1. dog age at collection:3.095282911248


title: A_rep2

description:
Library name: Sample 44
Column name in raw_counts.txt: A_rep2
Correspondence to fastq: DRM_02


title: LID_1072638_PID_10571

description:
Library name: LID_1072638_PID_10571
dog_id:19907966 precision cohort year 1. dog age at collection:3.59063426876569


title: A_rep1

description:
Library name: Sample 43
Column name in raw_counts.txt: A_rep1
Correspondence to fastq: DRM_01


title: LID_1072639_PID_10571

description:
Library name: LID_1072639_PID_10571
dog_id:19960508 precision cohort year 1. dog age at collection:4.09206023271732


title: MHCC97-H cells, WT1, 16h

description: Library name: Sample1

value: liver


title: M_rep2

description:
Library name: Sample 38
Column name in raw_counts.txt: M_rep2
Correspondence to fastq: DAR_02

value: M


title: LID_1072699_PID_10569

description:
Library name: LID_1072699_PID_10569
dog_id:18156107 precision cohort year 1. dog age at collection:4.91027834816336


title: M_rep3

description:
Library name: Sample 39
Column name in raw_counts.txt: M_rep3
Correspondence to fastq: DAR_03


title: M_rep1

description:
Library name: Sample 37
Column name in raw_counts.txt: M_rep1
Correspondence to fastq: DAR_01


title: R_rep2

description:
Library name: Sample 35
Column name in raw_counts.txt: R_rep2
Correspondence to fastq: DAM_02

value: R


title: R_rep3

description:
Library name: Sample 36
Column name in raw_counts.txt: R_rep3
Correspondence to fastq: DAM_03


title: LID_1072703_PID_10569

description:
Library name: LID_1072703_PID_10569
dog_id:18209096 precision cohort year 1. dog age at collection:1.25770020533881


title: D_rep3

description:
Library name: Sample 33
Column name in raw_counts.txt: D_rep3
Correspondence to fastq: ARM_03

value: D


title: LID_1072705_PID_10569

description:
Library name: LID_1072705_PID_10569
dog_id:18080084 precision cohort year 1. dog age at collection:1.38928815879535


title: D_rep1

description:
Library name: Sample 31
Column name in raw_counts.txt: D_rep1
Correspondence to fastq: ARM_01


title: R_rep1

description:
Library name: Sample 34
Column name in raw_counts.txt: R_rep1
Correspondence to fastq: DAM_01


title: LID_1072708_PID_10569

description:
Library name: LID_1072708_PID_10569
dog_id:18073547 precision cohort year 1. dog age at collection:1.80829340634269


title: LID_1072701_PID_10569

description:
Library name: LID_1072701_PID_10569
dog_id:18144080 precision cohort year 1. dog age at collection:13.1618754277892


title: WT_rep2

description:
Library name: Sample 29
Column name in raw_counts.txt: WT_rep2
Correspondence to fastq: WT_02


title: WT_rep3

description:
Library name: Sample 30
Column name in raw_counts.txt: WT_rep3
Correspondence to fastq: WT_03


title: LID_1072644_PID_10571

description:
Library name: LID_1072644_PID_10571
dog_id:20284949 precision cohort year 1. dog age at collection:7.22347707049966


title: LID_1072646_PID_10571

description:
Library name: LID_1072646_PID_10571
dog_id:20284856 precision cohort year 1. dog age at collection:4.39553388090349


title: LID_1072524_PID_10568

description:
Library name: LID_1072524_PID_10568
dog_id:26334307 precision cohort year 1. dog age at collection:2.33394174461936


title: WT_rep1

description:
Library name: Sample 28
Column name in raw_counts.txt: WT_rep1
Correspondence to fastq: WT_01


title: D_rep2

description:
Library name: Sample 32
Column name in raw_counts.txt: D_rep2
Correspondence to fastq: ARM_02


title: LID_1072702_PID_10569

description:
Library name: LID_1072702_PID_10569
dog_id:18132068 precision cohort year 1. dog age at collection:2.74184348619667


title: DR_rep3

description:
Library name: Sample 27
Column name in raw_counts.txt: DR_rep3
Correspondence to fastq: MA_03

value: DR


title: LID_1072658_PID_10571

description:
Library name: LID_1072658_PID_10571
dog_id:20661182 precision cohort year 1. dog age at collection:3.56593657312343


title: LID_1072654_PID_10571

description:
Library name: LID_1072654_PID_10571
dog_id:20469833 precision cohort year 1. dog age at collection:3.17995665069587


title: LID_1072649_PID_10571

description:
Library name: LID_1072649_PID_10571
dog_id:20309972 precision cohort year 1. dog age at collection:6.31200091261693


title: DR_rep2

description:
Library name: Sample 26
Column name in raw_counts.txt: DR_rep2
Correspondence to fastq: MA_02


title: LID_1072534_PID_10568

description:
Library name: LID_1072534_PID_10568
dog_id:26447337 precision cohort year 1. dog age at collection:14.4978895733516


title: LID_1072715_PID_10569

description:
Library name: LID_1072715_PID_10569
dog_id:18096443 precision cohort year 1. dog age at collection:5.80852156057495


title: DR_rep1

description:
Library name: Sample 25
Column name in raw_counts.txt: DR_rep1
Correspondence to fastq: MA_01


title: LID_1072662_PID_10571

description:
Library name: LID_1072662_PID_10571
dog_id:17701580 precision cohort year 1. dog age at collection:3.14419347478896


title: DA_rep2

description:
Library name: Sample 23
Column name in raw_counts.txt: DA_rep2
Correspondence to fastq: MR_02

value: DA


title: LID_1072716_PID_10569

description:
Library name: LID_1072716_PID_10569
dog_id:18049517 precision cohort year 1. dog age at collection:11.0567723781276


title: LID_1072663_PID_10571

description:
Library name: LID_1072663_PID_10571
dog_id:17709758 precision cohort year 1. dog age at collection:9.97524526579968


title: LID_1072667_PID_10571

description:
Library name: LID_1072667_PID_10571
dog_id:17981867 precision cohort year 1. dog age at collection:3.36879230359723


title: LID_1072664_PID_10571

description:
Library name: LID_1072664_PID_10571
dog_id:17707187 precision cohort year 1. dog age at collection:5.34508327629478


title: LID_1072669_PID_10571

description:
Library name: LID_1072669_PID_10571
dog_id:18008468 precision cohort year 1. dog age at collection:2.29304509848658


title: DM_rep1

description:
Library name: Sample 19
Column name in raw_counts.txt: DM_rep1
Correspondence to fastq: AR_01

value: DM


title: DM_rep3

description:
Library name: Sample 21
Column name in raw_counts.txt: DM_rep3
Correspondence to fastq: AR_03


title: DA_rep3

description:
Library name: Sample 24
Column name in raw_counts.txt: DA_rep3
Correspondence to fastq: MR_03


title: LID_1072675_PID_10571

description:
Library name: LID_1072675_PID_10571
dog_id:18019751 precision cohort year 1. dog age at collection:2.29280743782797


title: LID_1072671_PID_10571

description:
Library name: LID_1072671_PID_10571
dog_id:17986298 precision cohort year 1. dog age at collection:12.9567647729865


title: MR_rep2

description:
Library name: Sample 17
Column name in raw_counts.txt: RM_rep2
Correspondence to fastq: DA_02

value: MR


title: LID_1072673_PID_10571

description:
Library name: LID_1072673_PID_10571
dog_id:18000710 precision cohort year 1. dog age at collection:3.62314624686288


title: LID_1072678_PID_10571

description:
Library name: LID_1072678_PID_10571
dog_id:17978723 precision cohort year 1. dog age at collection:4.70759183207849


title: MR_rep1

description:
Library name: Sample 16
Column name in raw_counts.txt: RM_rep1
Correspondence to fastq: DA_01


title: AR_rep3

description:
Library name: Sample 15
Column name in raw_counts.txt: RA_rep3
Correspondence to fastq: DM_03

value: AR


title: MR_rep3

description:
Library name: Sample 18
Column name in raw_counts.txt: RM_rep3
Correspondence to fastq: DA_03


title: LID_1072672_PID_10571

description:
Library name: LID_1072672_PID_10571
dog_id:17988797 precision cohort year 1. dog age at collection:3.36864020077572


title: AM_rep2

description:
Library name: Sample 11
Column name in raw_counts.txt: AM_rep2
Correspondence to fastq: DR_02

value: AM


title: DM_rep2

description:
Library name: Sample 20
Column name in raw_counts.txt: DM_rep2
Correspondence to fastq: AR_02


title: DA_rep1

description:
Library name: Sample 22
Column name in raw_counts.txt: DA_rep1
Correspondence to fastq: MR_01


title: AR_rep1

description:
Library name: Sample 13
Column name in raw_counts.txt: RA_rep1
Correspondence to fastq: DM_01


title: AM_rep3

description:
Library name: Sample 12
Column name in raw_counts.txt: AM_rep3
Correspondence to fastq: DR_03


title: LID_1072682_PID_10571

description:
Library name: LID_1072682_PID_10571
dog_id:17986394 precision cohort year 1. dog age at collection:2.36995208761123


title: LID_1072677_PID_10571

description:
Library name: LID_1072677_PID_10571
dog_id:17983148 precision cohort year 1. dog age at collection:7.29200889801506