title: PA4620-1


title: PA4368-69-2

status: Public on Jul 06 2026

type: SRA

city: Hong Kong

first: Xin

last: DENG

address: 1/F, Block 1, To Yuen Building, City University of Hong Kong, 31 To Yuen Street, Kowloon Tong

department: Department of Biomedical Sciences

country: Hong Kong

institute: City University of Hong Kong

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4368-69.xlsx

library_source: transcriptomic

data_processing:
RNA-seq reads were mapped to the Pseudomonas aeruginosa (NC_002516.2) using STAR (version STAR_2.6.1). Only the uniquely mapped reads were kept for the subsequent analyses. The gene differential expression analysis was performed using DESeq2 R package.
Assembly: Pseudomonas aeruginosa (NC_002516.2)
Supplementary files format and content: xlsx files were generated from RNA-seq, containing the differential expressional genes.

molecule: polyA RNA

organism: Pseudomonas aeruginosa PAO1

source_name: Pseudomonas aeruginosa PAO1

growth_protocol: RNA-seq(LB)

extract_protocol:
The Pseudomonas aeruginosa PAO1 wild type strain and the HP mutants were inoculated into LB with corresponding antibiotics overnight cultured at 37 °C. Then the strains were one hundred times diluted into fresh LB. Before harvested, the P. aeruginosa strains were cultured for 3 h until OD600 to 0.6, at 37 °C with 220 rpm shaking. Then, 2 ml of bacterial cultures were collected by centrifugation (12,000 rpm, 4 °C). RNA extraction was performed by using the TianGen RNA extraction kit with the recommended DNase digestion. After removing rRNA by following the RiboRid protocol, mRNA was used to construct the cDNA library according to the NEBNext Ultra II RNA Library Prep Kit protocol (NEB), which was then sequenced using the HiSeq 2000 system (Illumina).
NEBNext UltraTM II RNA Library Prep Kit protocol

treatment_protocol: grow until mid-log phase

tag: tissue

value: Pseudomonas aeruginosa PAO1

tag: genotype

value: PA4368-69 mutant

tag: treatment

value: grow until mid-log phase in LB


title: PA4368-69-1


title: PA1677-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1677.xlsx

value: PA1677 mutant


title: PA3955-56-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3955-56.xlsx

value: PA3955-56 mutant


title: PA3955-56-1


title: PA4035-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4035.xlsx

value: PA4035 mutant


title: PA3869-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3869.xlsx

value: PA3869 mutant


title: PA4035-2


title: PA3869-1


title: PA3783-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3783.xlsx

value: PA3783 mutant


title: PA3783-1


title: PA3605-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3605.xlsx

value: PA3605 mutant


title: PA3605-1


title: PA3465-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3465.xlsx

value: PA3465 mutant


title: PA3592-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3592.xlsx

value: PA3592 mutant


title: PA3318-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3318.xlsx

value: PA3318 mutant


title: PA3592-1


title: PA3089-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3089.xlsx

value: PA3089 mutant


title: PA3089-2


title: PA3318-1


title: PA2864-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2864.xlsx

value: PA2864 mutant


title: PA2854-55-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2854-55.xlsx

value: PA2854-55 mutant


title: PA2854-55-2


title: PA2844-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2844.xlsx

value: PA2844 mutant


title: PA2844-2


title: PA2770-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2770.xlsx

value: PA2770 mutant


title: PA2759-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2759.xlsx

value: Pseudomonas aeruginosa PAO1

value: PA2759 mutant


title: PA2770-1

value: grow until mid-log phase in LB


title: PA2502-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2502.xlsx

value: PA2502 mutant


title: PA2720-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2720.xlsx

value: PA2720 mutant


title: PA2372-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2372.xlsx

value: PA2372 mutant


title: PA2372-1


title: PA2268-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2268.xlsx

value: PA2268 mutant


title: PA2268-1


title: PA2089-91-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2089-91.xlsx

value: PA2089-91 mutant


title: PA2089-91-1


title: PA2027-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2027.xlsx

value: PA2027 mutant


title: PA2017-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2017.xlsx

value: PA2017 mutant


title: PA2027-1


title: PA2017-1


title: PA1970-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1970.xlsx

value: PA1970 mutant


title: PA1970-1


title: PA1967-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1967.xlsx

value: PA1967 mutant


title: PA1967-1


title: PA1960-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1960.xlsx

value: PA1960 mutant


title: PA1960-1


title: PA1940-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1940.xlsx

value: PA1940 mutant


title: PA1940-2


title: PA1729-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1729.xlsx

value: PA1729 mutant


title: PA1673-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1673.xlsx

value: PA1673 mutant


title: PA1673-1


title: PA1547-48-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1547-48.xlsx

value: PA1547-48 mutant


title: PA1547-48-1

value: Pseudomonas aeruginosa PAO1


title: PA1495-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1495.xlsx

value: PA1495 mutant


title: PA1495-1

value: grow until mid-log phase in LB


title: PA1368-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1368.xlsx

value: PA1368 mutant


title: PA1368-1


title: PA1358-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1358.xlsx

value: PA1358 mutant


title: PA1358-1


title: PA1331-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1331.xlsx

value: PA1331 mutant


title: PA1331-1


title: PA1189-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1189.xlsx

value: PA1189 mutant


title: PA3465-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3465.xlsx

value: PA3465 mutant


title: PA1189-1


title: PA1186-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1186.xlsx

value: PA1186 mutant


title: PA2864-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2864.xlsx

value: PA2864 mutant


title: PA1186-1


title: PA1167-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1167.xlsx

value: PA1167 mutant


title: PA2759-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2759.xlsx

value: PA2759 mutant


title: PA1167-1


title: PA1154-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1154.xlsx

value: PA1154 mutant


title: PA2502-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2502.xlsx

value: PA2502 mutant


title: PA2720-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2720.xlsx

value: PA2720 mutant


title: PA1154-1


title: PA1152-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1152.xlsx

value: PA1152 mutant


title: PA1052-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1052.xlsx

value: PA1052 mutant


title: PA1152-1

value: Pseudomonas aeruginosa PAO1


title: PA1052-1


title: PA0976-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0976.xlsx

value: PA0976 mutant


title: PA0976-2

value: grow until mid-log phase in LB


title: PA0841-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0841.xlsx

value: PA0841 mutant


title: PA2166-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2166.xlsx

value: PA2166 mutant


title: PA2166-1


title: PA0841-1


title: PA0769-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0769.xlsx

value: PA0769 mutant


title: PA0732-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0732.xlsx

value: PA0732 mutant


title: PA0769-2


title: PA0732-1


title: PA0433-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0433.xlsx

value: PA0433 mutant


title: PA0433-1


title: PA0431-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0431.xlsx

value: PA0431 mutant


title: PA0431-2


title: PA0404-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0404.xlsx

value: PA0404 mutant


title: PA4495-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4495.xlsx

value: PA4495 mutant


title: PA0404-2


title: PA4495-1


title: PA4317-23-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4317-23.xlsx

value: PA4317-23 mutant


title: PA4317-23-1


title: PA4181-82-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4181-82.xlsx

value: PA4181-82 mutant


title: PA4181-82-1


title: PA1872-73-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1872-73.xlsx

value: PA1872-73 mutant


title: PA1872-73-1


title: PA1733-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1733.xlsx

value: PA1733 mutant


title: PA1733-1


title: PA0559-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0559.xlsx

value: PA0559 mutant


title: PA0559-1


title: PA0557-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0557.xlsx

value: PA0557 mutant


title: PA0557-1

value: Pseudomonas aeruginosa PAO1


title: PA0554-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0554.xlsx

value: PA0554 mutant


title: PA0554-1

value: grow until mid-log phase in LB


title: PA0457-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0457.xlsx

value: PA0457 mutant


title: PA0457-2


title: PA0536-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0536.xlsx

value: PA0536 mutant


title: PA0536-2


title: PA0453-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0453.xlsx

value: PA0453 mutant


title: PA0453-1


title: PA0449-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0449.xlsx

value: PA0449 mutant


title: PA0449-1


title: PA0442-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0442.xlsx

value: PA0442 mutant


title: PA0442-1


title: PA0434-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0434.xlsx

value: PA0434 mutant


title: PA0434-1


title: PA0421-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0421.xlsx

value: PA0421 mutant


title: PA0421-1


title: PA0418-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0418.xlsx

value: PA0418 mutant


title: PA0418-1


title: PA0391-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0391.xlsx

value: PA0391 mutant


title: PA0391-1


title: PA1729-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1729.xlsx

value: PA1729 mutant


title: PA0384-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0384.xlsx

value: PA0384 mutant


title: PA0384-1


title: PA0377-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0377.xlsx

value: PA0377 mutant


title: PA0377-1


title: PA0368-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0368.xlsx

value: PA0368 mutant


title: PA0368-1


title: PA0360-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0360.xlsx

value: PA0360 mutant


title: PA0360-1

value: Pseudomonas aeruginosa PAO1


title: PA0343-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0343.xlsx

value: PA0343 mutant


title: PA0343-1

value: grow until mid-log phase in LB


title: PA0340-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0340.xlsx

value: PA0340 mutant


title: PA0340-2


title: PA0339-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0339.xlsx

value: PA0339 mutant


title: PA0339-1


title: PA0332-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0332.xlsx

value: PA0332 mutant


title: PA0312-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0312.xlsx

value: PA0312 mutant


title: PA0332-2


title: PA0312-1


title: PA0308-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0308.xlsx

value: PA0308 mutant


title: PA0308-1


title: PA0264-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0264.xlsx

value: PA0264 mutant


title: PA0264-1


title: PA0257-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0257.xlsx

value: PA0257 mutant


title: PA0257-2


title: PA0252-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0252.xlsx

value: PA0252 mutant


title: PA0252-2


title: PA0250-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0250.xlsx

value: PA0250 mutant


title: PA0250-1


title: PA0187-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0187.xlsx

value: PA0187 mutant


title: PA3205-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3205.xlsx

value: PA3205 mutant


title: PA0165-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0165.xlsx

value: PA0165 mutant


title: PA0165-2


title: PA0187-1


title: PA0144-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0144.xlsx

value: PA0144 mutant


title: PA0144-1


title: PA0127-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0127.xlsx

value: PA0127 mutant


title: PA0127-2

value: Pseudomonas aeruginosa PAO1


title: PA0121-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0121.xlsx

value: PA0121 mutant


title: PA0121-1

value: grow until mid-log phase in LB


title: PA0118-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0118.xlsx

value: PA0118 mutant


title: PA0118-1


title: PA0115-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0115.xlsx

value: PA0115 mutant


title: PA0107-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0107.xlsx

value: PA0107 mutant


title: PA0115-1


title: PA0107-1


title: PA0064-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0064.xlsx

value: PA0064 mutant


title: PA0050-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0050.xlsx

value: PA0050 mutant


title: PA0064-1


title: PA0050-1


title: PA0046-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0046.xlsx

value: PA0046 mutant


title: PA0046-1


title: PA1677-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1677.xlsx

value: PA1677 mutant


title: PA0042-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0042.xlsx

value: PA0042 mutant


title: PA0042-1


title: PA0977-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0977.xlsx

value: PA0977 mutant


title: PA0027-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0027.xlsx

value: PA0027 mutant


title: PA0027-1


title: PA0014-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0014.xlsx

value: PA0014 mutant


title: PA0014-1


title: PA0543-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0543.xlsx

value: PA0543 mutant


title: PA0013-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0013.xlsx

value: PA0013 mutant


title: PA0013-1


title: PA5026-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA5026.xlsx

value: PA5026 mutant


title: PA4933-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4933.xlsx

value: Pseudomonas aeruginosa PAO1

value: PA4933 mutant


title: PA5026-1

value: grow until mid-log phase in LB


title: PA4933-1


title: PA4851-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4851.xlsx

value: PA4851 mutant


title: PA4851-1


title: PA4642-44-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4642-44.xlsx

value: PA4642-44 mutant


title: PA4642-44-1


title: PA4570-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4570.xlsx

value: PA4570 mutant


title: PA3939-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3939.xlsx

value: PA3939 mutant


title: PA3939-1


title: PA3928-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3928.xlsx

value: PA3928 mutant


title: PA3928-1


title: PA3734-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3734.xlsx

value: PA3734 mutant


title: PA3734-1


title: PA3323-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3323.xlsx

value: PA3323 mutant


title: PA3323-2


title: PA3224-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3224.xlsx

value: PA3224 mutant


title: PA3125-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3125.xlsx

value: PA3125 mutant


title: PA3125-1


title: PA3224-2


title: PA2946-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2946.xlsx

value: PA2946 mutant


title: PA2946-1


title: PA2878-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2878.xlsx

value: PA2878 mutant


title: PA2878-1


title: PA2756-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2756.xlsx

value: PA2756 mutant


title: PA2753-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2753.xlsx

value: PA2753 mutant


title: PA2756-1


title: PA2753-1


title: PA2751-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2751.xlsx

value: PA2751 mutant


title: PA2433-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2433.xlsx

value: Pseudomonas aeruginosa PAO1

value: PA2433 mutant


title: PA2751-1

value: grow until mid-log phase in LB


title: PA2433-1


title: PA4570-2


title: PA2163-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2163.xlsx

value: PA2163 mutant


title: PA2163-2


title: PA2139-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2139.xlsx

value: PA2139 mutant


title: PA2139-1


title: PA2037-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2037.xlsx

value: PA2037 mutant


title: PA2037-1


title: PA2004-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2004.xlsx

value: PA2004 mutant


title: PA1935-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1935.xlsx

value: PA1935 mutant


title: PA2004-1


title: PA1935-1


title: PA1934-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1934.xlsx

value: PA1934 mutant


title: PA1934-2


title: PA1835-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1835.xlsx

value: PA1835 mutant


title: PA1467-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1467.xlsx

value: PA1467 mutant


title: PA1467-1


title: PA1112-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1112.xlsx

value: PA1112 mutant


title: PA1112-2


title: PA0834-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0834.xlsx

value: PA0834 mutant


title: PA0834-1


title: PA1835-2


title: PA0663-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0663.xlsx

value: PA0663 mutant


title: PA0663-1


title: PA0614-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0614.xlsx

value: PA0614 mutant


title: PA0614-1


title: PA0572-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0572.xlsx

value: PA0572 mutant


title: PA0572-1


title: PA0319-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0319.xlsx

value: PA0319 mutant


title: PA0319-1

value: Pseudomonas aeruginosa PAO1


title: PA0069-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0069.xlsx

value: PA0069 mutant


title: PA0069-1

value: grow until mid-log phase in LB


title: PA0021-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0021.xlsx

value: PA0021 mutant


title: PA0021-1


title: PA4963-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4963.xlsx

value: PA4963 mutant


title: PA4963-1


title: PA4421-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4421.xlsx

value: PA4421 mutant


title: PA4421-1


title: PA4140-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4140.xlsx

value: PA4140 mutant


title: PA4140-1


title: PA3893-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3893.xlsx

value: PA3893 mutant


title: PA3893-1


title: PA3819-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3819.xlsx

value: PA3819 mutant


title: PA3819-1


title: PA3412-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3412.xlsx

value: PA3412 mutant


title: PA3412-1


title: PA3273-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3273.xlsx

value: PA3273 mutant


title: PA3273-1


title: PA3079-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3079.xlsx

value: PA3079 mutant


title: PA3079-1


title: PA3052-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3052.xlsx

value: PA3052 mutant


title: PA3052-1


title: PA3017-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3017.xlsx

value: PA3017 mutant


title: PA3017-1


title: PA3015-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3015.xlsx

value: PA3015 mutant


title: PA3015-1


title: PA2954-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2954.xlsx

value: PA2954 mutant


title: PA2954-1


title: PA2916-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2916.xlsx

value: PA2916 mutant


title: PA2916-2

value: Pseudomonas aeruginosa PAO1


title: PA2428-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2428.xlsx

value: PA2428 mutant


title: PA2375-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2375.xlsx

value: PA2375 mutant

value: grow until mid-log phase in LB


title: PA2428-1


title: PA2201-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2201.xlsx

value: PA2201 mutant


title: PA2201-1


title: PA2375-1


title: PA2197-98-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2197-98.xlsx

value: PA2197-98 mutant


title: PA2156-57-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2156-57.xlsx

value: PA2156-57 mutant


title: PA2156-57-1


title: PA2029-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2029.xlsx

value: PA2029 mutant


title: PA1641-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1641.xlsx

value: PA1641 mutant


title: PA2029-1


title: PA1143-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1143.xlsx

value: PA1143 mutant


title: PA1143-1


title: PA1045-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1045.xlsx

value: PA1045 mutant


title: PA2197-98-1


title: PA1037-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1037.xlsx

value: PA1037 mutant


title: PA1045-1


title: PA0894-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0894.xlsx

value: PA0894 mutant


title: PA1037-1


title: PA1641-1


title: PA0894-1


title: PA0790-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0790.xlsx

value: PA0790 mutant


title: PA0790-2


title: PA0653-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0653.xlsx

value: PA0653 mutant


title: PA0653-1


title: PA0636-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0636.xlsx

value: PA0636 mutant


title: PA0636-1


title: PA0578-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0578.xlsx

value: PA0578 mutant


title: PA0578-1

value: Pseudomonas aeruginosa PAO1


title: PA2910-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2910.xlsx

value: PA2910 mutant


title: PA2910-1


title: PA2884-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2884.xlsx

value: PA2884 mutant


title: PA2884-2

value: grow until mid-log phase in LB


title: PA2820-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2820.xlsx

value: PA2820 mutant


title: PA2784-85-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2784-85.xlsx

value: PA2784-85 mutant


title: PA2784-85-2


title: PA2820-1


title: PA2691-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2691.xlsx

value: PA2691 mutant


title: PA2691-1


title: PA2658-59-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2658-59.xlsx

value: PA2658-59 mutant


title: PA2658-59-2


title: PA2651-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2651.xlsx

value: PA2651 mutant


title: PA2610-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2610.xlsx

value: PA2610 mutant


title: PA2651-2


title: PA2610-1


title: PA2457-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2457.xlsx

value: PA2457 mutant


title: PA2457-1


title: PA2353-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2353.xlsx

value: PA2353 mutant


title: PA2353-1


title: PA2345-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2345.xlsx

value: PA2345 mutant


title: PA2345-1


title: PA2326-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2326.xlsx

value: PA2326 mutant


title: PA2326-1


title: PA2222-23-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2222-23.xlsx

value: PA2222-23 mutant


title: PA2222-23-1


title: PA2221-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2221.xlsx

value: PA2221 mutant


title: PA2221-1


title: PA2063-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2063.xlsx

value: PA2063 mutant


title: PA2063-1

value: Pseudomonas aeruginosa PAO1


title: PA1974-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1974.xlsx

value: PA1974 mutant


title: PA1974-2


title: PA1966-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1966.xlsx

value: PA1966 mutant


title: PA1966-1

value: grow until mid-log phase in LB


title: PA1965-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1965.xlsx

value: PA1965 mutant


title: PA1965-2


title: PA1944-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1944.xlsx

value: PA1944 mutant


title: PA1944-1


title: PA1942-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1942.xlsx

value: PA1942 mutant


title: PA1942-1


title: PA1939-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1939.xlsx

value: PA1939 mutant


title: PA1939-1


title: PA1929-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1929.xlsx

value: PA1929 mutant


title: PA1909-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1909.xlsx

value: PA1909 mutant


title: PA1929-1


title: PA1855-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1855.xlsx

value: PA1855 mutant


title: PA1909-1


title: PA1855-1


title: PA1842-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1842.xlsx

value: PA1842 mutant


title: PA1842-1


title: PA1769-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1769.xlsx

value: PA1769 mutant


title: PA1769-1


title: PA1755-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1755.xlsx

value: PA1755 mutant


title: PA1755-1


title: PA1645-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1645.xlsx

value: PA1645 mutant


title: PA1645-2


title: PA1559-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1559.xlsx

value: PA1559 mutant


title: PA1414-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1414.xlsx

value: PA1414 mutant


title: PA1414-1

value: Pseudomonas aeruginosa PAO1


title: PA1355-56-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1355-56.xlsx

value: PA1355-56 mutant


title: PA1149-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1149.xlsx

value: PA1149 mutant


title: PA1355-56-2

value: grow until mid-log phase in LB


title: PA1133-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1133.xlsx

value: PA1133 mutant


title: PA1149-1


title: PA1133-1


title: PA1559-1


title: PA1118-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1118.xlsx

value: PA1118 mutant


title: PA4515-16-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4515-16.xlsx

value: PA4515-16 mutant


title: PA1118-2


title: PA4515-16-1


title: PA5028-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA5028.xlsx

value: PA5028 mutant


title: PA4440-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4440.xlsx

value: PA4440 mutant


title: PA5028-1


title: PA4163-64-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4163-64.xlsx

value: PA4163-64 mutant


title: PA4163-64-1


title: PA4440-1


title: PA4146-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4146.xlsx

value: PA4146 mutant


title: PA4146-1


title: PA4076-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4076.xlsx

value: PA4076 mutant


title: PA4076-1


title: PA3966-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3966.xlsx

value: PA3966 mutant


title: PA3966-2


title: PA3836-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3836.xlsx

value: PA3836 mutant


title: PA3836-1


title: PA3764-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3764.xlsx

value: PA3764 mutant


title: PA3764-1


title: PA3750-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3750.xlsx

value: PA3750 mutant


title: PA3615-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3615.xlsx

value: PA3615 mutant


title: PA3615-1

value: Pseudomonas aeruginosa PAO1


title: PA3750-2


title: PA3435-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3435.xlsx

value: PA3435 mutant


title: PA3435-1


title: PA3362-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3362.xlsx

value: PA3362 mutant


title: PA3362-1

value: grow until mid-log phase in LB


title: PA3358-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3358.xlsx

value: PA3358 mutant


title: PA3320-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3320.xlsx

value: PA3320 mutant


title: PA3358-2


title: PA3320-1


title: PA3140-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3140.xlsx

value: PA3140 mutant


title: PA3140-1


title: PA2871-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2871.xlsx

value: PA2871 mutant


title: PA2871-2


title: PA2757-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2757.xlsx

value: PA2757 mutant


title: PA2757-1


title: PA2562-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2562.xlsx

value: PA2562 mutant


title: PA2504-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2504.xlsx

value: PA2504 mutant


title: PA2504-1


title: PA2562-2


title: PA2484-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2484.xlsx

value: PA2484 mutant


title: PA2415-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2415.xlsx

value: PA2415 mutant


title: PA2415-2


title: PA2377-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2377.xlsx

value: PA2377 mutant


title: PA2311-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2311.xlsx

value: PA2311 mutant


title: PA2311-1


title: PA2211-12-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2211-12.xlsx

value: PA2211-12 mutant


title: PA2183-84-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2183-84.xlsx

value: PA2183-84 mutant


title: PA2183-84-1

value: Pseudomonas aeruginosa PAO1


title: PA2145-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2145.xlsx

value: PA2145 mutant


title: PA2145-1


title: PA2377-2


title: PA2211-12-1


title: PA2141-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2141.xlsx

value: PA2141 mutant


title: PA2141-1

value: grow until mid-log phase in LB


title: PA2074-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2074.xlsx

value: PA2074 mutant


title: PA2074-1


title: PA1879-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1879.xlsx

value: PA1879 mutant


title: PA1879-1


title: PA1824-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1824.xlsx

value: PA1824 mutant


title: PA1824-1


title: PA1751-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1751.xlsx

value: PA1751 mutant


title: PA1751-2


title: PA1672-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1672.xlsx

value: PA1672 mutant


title: PA1411-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1411.xlsx

value: PA1411 mutant


title: PA1672-2


title: PA1411-1


title: PA1366-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1366.xlsx

value: PA1366 mutant


title: PA1366-2


title: PA1357-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1357.xlsx

value: PA1357 mutant


title: PA1357-1


title: PA1139-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1139.xlsx

value: PA1139 mutant


title: PA1139-2


title: PA1026-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1026.xlsx

value: PA1026 mutant


title: PA0946-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0946.xlsx

value: PA0946 mutant


title: PA0924-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0924.xlsx

value: PA0924 mutant


title: PA0946-2


title: PA0924-1


title: PA0914-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0914.xlsx

value: PA0914 mutant


title: PA0921-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0921.xlsx

value: Pseudomonas aeruginosa PAO1

value: PA0921 mutant


title: PA0921-2


title: PA0914-1


title: PA0902-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0902.xlsx

value: PA0902 mutant


title: PA1026-1

value: grow until mid-log phase in LB


title: PA0902-1


title: PA0808-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0808.xlsx

value: PA0808 mutant


title: PA2484-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2484.xlsx

value: PA2484 mutant


title: PA0808-1


title: PA0731-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0731.xlsx

value: PA0731 mutant


title: PA0731-1


title: PA0646-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0646.xlsx

value: PA0646 mutant


title: PA0646-1


title: PA4908-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4908.xlsx

value: PA4908 mutant


title: PA4908-2


title: PA4738-39-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4738-39.xlsx

value: PA4738-39 mutant


title: PA4738-39-1


title: PA4535-37-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4535-37.xlsx

value: PA4535-37 mutant


title: PA4535-37-1


title: PA4173-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4173.xlsx

value: PA4173 mutant


title: PA4173-1


title: PA4041-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4041.xlsx

value: PA4041 mutant


title: PA4041-1


title: PA2790-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2790.xlsx

value: PA2790 mutant


title: PA3849-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3849.xlsx

value: PA3849 mutant


title: PA3849-2


title: PA2790-1


title: PA2773-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2773.xlsx

value: PA2773 mutant


title: PA2789-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2789.xlsx

value: PA2789 mutant


title: PA2789-2

value: Pseudomonas aeruginosa PAO1


title: PA2773-1


title: PA2763-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2763.xlsx

value: PA2763 mutant


title: PA2192-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2192.xlsx

value: PA2192 mutant


title: PA2763-1

value: grow until mid-log phase in LB


title: PA2192-1


title: PA2170-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2170.xlsx

value: PA2170 mutant


title: PA2186-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2186.xlsx

value: PA2186 mutant


title: PA2170-1


title: PA2154-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2154.xlsx

value: PA2154 mutant


title: PA2186-2


title: PA2154-1


title: PA2148-50-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2148-50.xlsx

value: PA2148-50 mutant


title: PA2137-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2137.xlsx

value: PA2137 mutant


title: PA2137-1


title: PA2148-50-1


title: PA1607-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1607.xlsx

value: PA1607 mutant


title: PA1607-1


title: PA1230-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1230.xlsx

value: PA1230 mutant


title: PA1230-1


title: PA1280-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1280.xlsx

value: PA1280 mutant


title: PA1352-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1352.xlsx

value: PA1352 mutant


title: PA1352-2


title: PA1168-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1168.xlsx

value: PA1168 mutant


title: PA1168-2


title: PA1280-2


title: PA1117-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1117.xlsx

value: PA1117 mutant


title: PA1117-1


title: PA1116-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1116.xlsx

value: PA1116 mutant


title: PA1116-1


title: PA1111-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1111.xlsx

value: PA1111 mutant


title: PA1111-1

value: Pseudomonas aeruginosa PAO1


title: PA2883-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2883.xlsx

value: PA2883 mutant


title: PA2883-1


title: PA0858-59-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0858-59.xlsx

value: PA0858-59 mutant


title: PA0850-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0850.xlsx

value: PA0850 mutant

value: grow until mid-log phase in LB


title: PA0858-59-2


title: PA0850-1


title: PA0542-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0542.xlsx

value: PA0542 mutant


title: PA0542-1


title: PA0488-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0488.xlsx

value: PA0488 mutant


title: PA0488-1


title: PA0429-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0429.xlsx

value: PA0429 mutant


title: PA0429-1


title: PA0251-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0251.xlsx

value: PA0251 mutant


title: PA0251-1


title: PA0145-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0145.xlsx

value: PA0145 mutant


title: PA0145-2


title: PA4879-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4879.xlsx

value: PA4879 mutant


title: PA4833-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4833.xlsx

value: PA4833 mutant


title: PA4879-1


title: PA4833-1


title: PA4632-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4632.xlsx

value: PA4632 mutant


title: PA4632-1


title: PA4335-36-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4335-36.xlsx

value: PA4335-36 mutant


title: PA4335-36-1


title: PA4169-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4169.xlsx

value: PA4169 mutant


title: PA4169-1


title: PA4154-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4154.xlsx

value: PA4154 mutant


title: PA4154-1


title: PA4058-60-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4058-60.xlsx

value: PA4058-60 mutant


title: PA4009-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4009.xlsx

value: Pseudomonas aeruginosa PAO1

value: PA4009 mutant


title: PA4009-1


title: PA3979-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3979.xlsx

value: PA3979 mutant


title: PA3808-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3808.xlsx

value: PA3808 mutant


title: PA3979-1

value: grow until mid-log phase in LB


title: PA4058-60-2


title: PA3808-1


title: PA3712-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3712.xlsx

value: PA3712 mutant


title: PA3712-1


title: PA3675-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3675.xlsx

value: PA3675 mutant


title: PA3675-1


title: PA3669-70-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3669-70.xlsx

value: PA3669-70 mutant


title: PA3669-70-1


title: PA3631-32-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3631-32.xlsx

value: PA3631-32 mutant


title: PA3631-32-2


title: PA3457-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3457.xlsx

value: PA3457 mutant


title: PA3370-71-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3370-71.xlsx

value: PA3370-71 mutant


title: PA3457-1


title: PA3370-71-2


title: PA2662-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2662.xlsx

value: PA2662 mutant


title: PA2662-2


title: PA2582-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2582.xlsx

value: PA2582 mutant


title: PA2582-1


title: PA2549-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2549.xlsx

value: PA2549 mutant


title: PA2549-2


title: PA2309-10-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2309-10.xlsx

value: PA2309-10 mutant


title: PA2309-10-1


title: PA2189-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2189.xlsx

value: PA2189 mutant


title: PA2189-2


title: PA2175-76-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2175-76.xlsx

value: PA2175-76 mutant


title: PA2175-76-1

value: Pseudomonas aeruginosa PAO1


title: PA2116-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2116.xlsx

value: PA2116 mutant


title: PA2116-1


title: PA2021-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2021.xlsx

value: PA2021 mutant


title: PA1968-69-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1968-69.xlsx

value: PA1968-69 mutant


title: PA2021-1

value: grow until mid-log phase in LB


title: PA1968-69-1


title: PA1937-38-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1937-38.xlsx

value: PA1937-38 mutant


title: PA1937-38-1


title: PA1053-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1053.xlsx

value: PA1053 mutant


title: PA1053-1


title: PA0916-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0916.xlsx

value: PA0916 mutant


title: PA0891-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0891.xlsx

value: PA0891 mutant


title: PA0916-1


title: PA0891-1


title: PA0875-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0875.xlsx

value: PA0875 mutant


title: PA0875-1


title: PA0806-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0806.xlsx

value: PA0806 mutant


title: PA0806-1


title: PA0061-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0061.xlsx

value: PA0061 mutant


title: PA0061-2


title: PA0054-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0054.xlsx

value: PA0054 mutant


title: PA0054-1


title: PA4779-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4779.xlsx

value: PA4779 mutant


title: PA4779-1


title: PA4458-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4458.xlsx

value: PA4458 mutant


title: PA4580-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4580.xlsx

value: PA4580 mutant


title: PA4580-1


title: PA4364-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4364.xlsx

value: PA4364 mutant


title: PA4364-2

value: Pseudomonas aeruginosa PAO1


title: PA4458-1


title: PA4324-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4324.xlsx

value: PA4324 mutant


title: PA3931-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3931.xlsx

value: PA3931 mutant


title: PA3931-1


title: PA4324-2


title: PA3856-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3856.xlsx

value: PA3856 mutant


title: PA3856-1

value: grow until mid-log phase in LB


title: PA3826-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3826.xlsx

value: PA3826 mutant


title: PA3298-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3298.xlsx

value: PA3298 mutant


title: PA3179-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3179.xlsx

value: PA3179 mutant


title: PA3298-1


title: PA3031-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3031.xlsx

value: PA3031 mutant


title: PA3031-1


title: PA2831-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2831.xlsx

value: PA2831 mutant


title: PA3179-1


title: PA2831-1


title: PA2772-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2772.xlsx

value: PA2772 mutant


title: PA2772-1


title: PA2761-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2761.xlsx

value: PA2761 mutant


title: PA2761-2


title: PA2594-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2594.xlsx

value: PA2594 mutant


title: PA2594-1


title: PA2422-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2422.xlsx

value: PA2422 mutant


title: PA2360-64-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2360-64.xlsx

value: PA2360-64 mutant


title: PA2422-2


title: PA2346-49-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2346-49.xlsx

value: PA2346-49 mutant


title: PA2360-64-1


title: PA2346-49-1


title: PA2296-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2296.xlsx

value: PA2296 mutant


title: PA2296-1

value: Pseudomonas aeruginosa PAO1


title: PA2289-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2289.xlsx

value: PA2289 mutant


title: PA2289-1


title: PA2282-87-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2282-87.xlsx

value: PA2282-87 mutant


title: PA2282-87-1


title: PA2269-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2269.xlsx

value: PA2269 mutant


title: PA2269-1

value: grow until mid-log phase in LB


title: PA2264-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2264.xlsx

value: PA2264 mutant


title: PA2264-1


title: PA2218-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2218.xlsx

value: PA2218 mutant


title: PA2251-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2251.xlsx

value: PA2251 mutant


title: PA2218-1


title: PA2251-2


title: PA2205-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2205.xlsx

value: PA2205 mutant


title: PA2190-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2190.xlsx

value: PA2190 mutant


title: PA2190-2


title: PA2205-2


title: PA2182-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2182.xlsx

value: PA2182 mutant


title: PA2182-1


title: PA2181-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2181.xlsx

value: PA2181 mutant


title: PA3662-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3662.xlsx

value: PA3662 mutant


title: PA2181-1


title: PA2174-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2174.xlsx

value: PA2174 mutant


title: PA2174-1


title: PA2171-73-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2171-73.xlsx

value: PA2171-73 mutant


title: PA2151-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2151.xlsx

value: PA2151 mutant


title: PA2171-73-2


title: PA2151-2


title: PA2026-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2026.xlsx

value: PA2026 mutant


title: PA2026-1

value: Pseudomonas aeruginosa PAO1


title: PA1943-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1943.xlsx

value: PA1943 mutant


title: PA1943-1


title: PA1915-18-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1915-18.xlsx

value: PA1915-18 mutant


title: PA1915-18-2


title: PA1865-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1865.xlsx

value: PA1865 mutant


title: PA1851-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1851.xlsx

value: PA1851 mutant

value: grow until mid-log phase in LB


title: PA1865-1


title: PA1851-1


title: PA1639-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1639.xlsx

value: PA1639 mutant


title: PA1639-1


title: PA1401-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1401.xlsx

value: PA1401 mutant


title: PA1401-2


title: PA1132-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1132.xlsx

value: PA1132 mutant


title: PA1132-1


title: PA0943-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0943.xlsx

value: PA0943 mutant


title: PA0878-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0878.xlsx

value: PA0878 mutant


title: PA0943-2


title: PA0878-1


title: PA0714-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0714.xlsx

value: PA0714 mutant


title: PA0714-1


title: PA4952-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4952.xlsx

value: PA4952 mutant


title: PA4952-1


title: PA4445-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4445.xlsx

value: PA4445 mutant


title: PA4441-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4441.xlsx

value: PA4441 mutant


title: PA2833-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2833.xlsx

value: PA2833 mutant


title: PA4441-1


title: PA4388-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4388.xlsx

value: PA4388 mutant


title: PA2792-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2792.xlsx

value: Pseudomonas aeruginosa PAO1

value: PA2792 mutant


title: PA4291-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4291.xlsx

value: PA4291 mutant


title: PA3203-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3203.xlsx

value: PA3203 mutant


title: PA4388-1


title: PA3342-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3342.xlsx

value: PA3342 mutant


title: PA3342-2

value: grow until mid-log phase in LB


title: PA4445-1


title: PA4291-2


title: PA3180-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3180.xlsx

value: PA3180 mutant


title: PA3180-2


title: PA2868-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2868.xlsx

value: PA2868 mutant


title: PA2630-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2630.xlsx

value: PA2630 mutant


title: PA2868-1


title: Patient 688  008 stroma

city: Montreal

first: Tamiko

last: Nishimura

address: 740 ave Dr Penfield

country: Canada

institute: McGill University

description: Library name: 11_WTA_PanCK_CD68 | 008 | stroma

library_source: other

data_processing:
The raw data (FASTQ) was converted to DCC files for upload into Bruker Spatial's proprietary software. Data was Q3 normalized and target mRNAs that were detected in at least 1% of the AOIs were retained in the analysis, resulting in inclusion of 12,489 targets.
Assembly: Nanostring synthetic WTA and custom respiratory microbe barcode reference
Supplementary files format and content: Q3 normalized count matrix table for 184 libraries with 12,489 targets
Library strategy: Spatial Transcriptomics

molecule: other

organism: Homo sapiens

source_name: lung needle biopsy

extract_protocol:
Clinical biopsies were fixed in formalin, embedded in paraffin, and sectioned onto positively charged slides (4 biopsies per slide) for GeoMx DSP WTA analysis. Barcodes attached to antisense probes were released by UV-illumination and collected.
Releasates from each area-of-illumination (PanCK+ or PanCK-/stroma) were collected into a well of a 96-well plate and dual-index Illumina sequencing adapters were added by PCR amplification. Libraries were pooled and sequenced on an Illumina NovaSeq 6000.

value: lung needle biopsy

tag: Sex

value: Male

tag: caucasian

value: Yes

tag: age

tag: bmi

tag: diagnosis (asthma_or_healthy_control)

value: Control

tag: asthma severity

value: Not applicable

tag: ever smoked

value: No


title: PA2630-1


title: PA2134-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2134.xlsx

value: PA2134 mutant


title: PA2106-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2106.xlsx

value: PA2106 mutant


title: PA2134-1

value: Pseudomonas aeruginosa PAO1


title: PA2066-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2066.xlsx

value: PA2066 mutant


title: PA2106-2


title: PA2066-1


title: PA1741-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1741.xlsx

value: PA1741 mutant


title: PA1741-1


title: PA1734-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1734.xlsx

value: PA1734 mutant


title: PA2044-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2044.xlsx

value: PA2044 mutant


title: PA1734-2

value: grow until mid-log phase in LB


title: PA1652-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1652.xlsx

value: PA1652 mutant


title: PA1652-1


title: PA1593-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1593.xlsx

value: PA1593 mutant


title: PA1593-1


title: PA1539-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1539.xlsx

value: PA1539 mutant


title: PA1539-1


title: PA1408-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1408.xlsx

value: PA1408 mutant


title: PA1415-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1415.xlsx

value: PA1415 mutant


title: PA1408-1


title: PA1305-08-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1305-08.xlsx

value: PA1305-08 mutant


title: PA1415-2


title: PA1305-08-1


title: PA1188-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1188.xlsx

value: PA1188 mutant


title: PA1188-1


title: PA1115-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1115.xlsx

value: PA1115 mutant


title: PA1115-1


title: PA1069-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1069.xlsx

value: PA1069 mutant


title: PA2436-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2436.xlsx

value: PA2436 mutant


title: PA0670-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0670.xlsx

value: PA0670 mutant


title: PA1471-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1471.xlsx

value: Pseudomonas aeruginosa PAO1

value: PA1471 mutant


title: PA2418-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2418.xlsx

value: PA2418 mutant


title: PA1060-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1060.xlsx

value: PA1060 mutant


title: PA1042-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1042.xlsx

value: PA1042 mutant


title: PA0989-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0989.xlsx

value: PA0989 mutant

value: grow until mid-log phase in LB


title: PA0957-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0957.xlsx

value: PA0957 mutant


title: PA1060-1


title: PA0957-1


title: PA0851-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0851.xlsx

value: PA0851 mutant


title: PA0541-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0541.xlsx

value: PA0541 mutant


title: PA0851-1


title: PA0805-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0805.xlsx

value: PA0805 mutant


title: PA0591-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0591.xlsx

value: PA0591 mutant


title: PA0492-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0492.xlsx

value: PA0492 mutant


title: PA0492-1


title: PA0379-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0379.xlsx

value: PA0379 mutant


title: PA0379-1


title: PA0486-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0486.xlsx

value: PA0486 mutant


title: PA0359-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0359.xlsx

value: PA0359 mutant


title: PA0389-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0389.xlsx

value: PA0389 mutant


title: PA0522-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0522.xlsx

value: Pseudomonas aeruginosa PAO1

value: PA0522 mutant


title: PA0284-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0284.xlsx

value: PA0284 mutant


title: PA0284-1


title: PA4925-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4925.xlsx

value: PA4925 mutant


title: PA4925-1


title: PA4881-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4881.xlsx

value: PA4881 mutant


title: PA4881-2


title: PA4773-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4773.xlsx

value: PA4773 mutant


title: PA4746-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4746.xlsx

value: PA4746 mutant

value: grow until mid-log phase in LB


title: PA4177-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4177.xlsx

value: PA4177 mutant


title: PA4377-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4377.xlsx

value: PA4377 mutant


title: PA4834-36-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4834-36.xlsx

value: PA4834-36 mutant


title: PA4834-36-1


title: PA4713-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4713.xlsx

value: PA4713 mutant


title: PA4177-1


title: PA0989-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0989.xlsx

value: PA0989 mutant


title: PA1042-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1042.xlsx

value: PA1042 mutant


title: PA4139-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4139.xlsx

value: PA4139 mutant


title: PA0591-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0591.xlsx

value: PA0591 mutant


title: PA4139-1


title: PA4132-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4132.xlsx

value: PA4132 mutant


title: PA4132-2

value: Pseudomonas aeruginosa PAO1


title: PA0589-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0589.xlsx

value: PA0589 mutant


title: PA3985-86-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3985-86.xlsx

value: PA3985-86 mutant


title: PA0549-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0549.xlsx

value: PA0549 mutant


title: PA0486-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0486.xlsx

value: PA0486 mutant


title: PA0549-2


title: PA3944-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3944.xlsx

value: PA3944 mutant


title: PA3944-2


title: PA3991-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3991.xlsx

value: PA3991 mutant


title: PA3991-1

value: grow until mid-log phase in LB


title: PA3850-52-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3850-52.xlsx

value: PA3850-52 mutant


title: PA3850-52-1


title: PA3733-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3733.xlsx

value: PA3733 mutant


title: PA3733-1


title: PA3707-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3707.xlsx

value: PA3707 mutant


title: PA3623-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3623.xlsx

value: PA3623 mutant


title: PA3464-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3464.xlsx

value: PA3464 mutant


title: PA3464-1


title: PA3428-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3428.xlsx

value: PA3428 mutant


title: PA3367-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3367.xlsx

value: PA3367 mutant


title: PA3367-2


title: PA2803-04-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2803-04.xlsx

value: PA2803-04 mutant


title: PA2803-04-1


title: PA4793-96-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4793-96.xlsx

value: PA4793-96 mutant


title: PA2737-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2737.xlsx

value: Pseudomonas aeruginosa PAO1

value: PA2737 mutant


title: PA2481-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2481.xlsx

value: PA2481 mutant


title: PA2481-1


title: PA1616-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1616.xlsx

value: PA1616 mutant


title: PA1606-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1606.xlsx

value: PA1606 mutant


title: PA1606-1


title: PA1577-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1577.xlsx

value: PA1577 mutant


title: PA1466-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1466.xlsx

value: PA1466 mutant


title: PA1466-1

value: grow until mid-log phase in LB


title: PA1450-51-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1450-51.xlsx

value: PA1450-51 mutant


title: PA1450-51-1


title: PA1426-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1426.xlsx

value: PA1426 mutant


title: PA1406-07-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1406-07.xlsx

value: PA1406-07 mutant


title: PA1406-07-1


title: PA1404-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1404.xlsx

value: PA1404 mutant


title: PA1404-1


title: PA1398-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1398.xlsx

value: PA1398 mutant


title: PA1398-1


title: PA1387-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1387.xlsx

value: PA1387 mutant


title: PA1387-1


title: PA1383-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1383.xlsx

value: PA1383 mutant


title: PA1383-1


title: PA1005-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1005.xlsx

value: PA1005 mutant


title: PA1005-1


title: PA0862-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0862.xlsx

value: PA0862 mutant


title: PA0862-1

value: Pseudomonas aeruginosa PAO1


title: PA0666-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0666.xlsx

value: PA0666 mutant


title: PA0666-1


title: PA0392-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0392.xlsx

value: PA0392 mutant


title: PA0392-1


title: PA4691-92-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4691-92.xlsx

value: PA4691-92 mutant


title: PA2737-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2737.xlsx

value: PA2737 mutant


title: PA4691-92-1


title: PA4463-65-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4463-65.xlsx

value: PA4463-65 mutant


title: PA3421-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3421.xlsx

value: PA3421 mutant


title: PA3421-1

value: grow until mid-log phase in LB


title: PA3352-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3352.xlsx

value: PA3352 mutant


title: PA1140-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1140.xlsx

value: PA1140 mutant


title: PA1069-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1069.xlsx

value: PA1069 mutant


title: PA3352-1


title: PA3350-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3350.xlsx

value: PA3350 mutant


title: PA3350-1


title: PA3199-00-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3199-00.xlsx

value: PA3199-00 mutant


title: PA3199-00-1


title: PA3016-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3016.xlsx

value: PA3016 mutant


title: PA2697-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2697.xlsx

value: PA2697 mutant


title: PA2430-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2430.xlsx

value: PA2430 mutant


title: PA2430-1


title: PA3016-2


title: PA2318-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2318.xlsx

value: PA2318 mutant


title: PA2697-1

value: Pseudomonas aeruginosa PAO1


title: PA2228-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2228.xlsx

value: PA2228 mutant


title: PA2075-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2075.xlsx

value: PA2075 mutant


title: PA2075-1


title: PA1849-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1849.xlsx

value: PA1849 mutant


title: PA1849-1


title: PA4607-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4607.xlsx

value: PA4607 mutant


title: PA4607-1


title: PA4463-65-2

value: PA4463-65 mutant


title: PA1746-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1746.xlsx

value: PA1746 mutant


title: PA1746-1

value: grow until mid-log phase in LB


title: PA1578-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1578.xlsx

value: PA1578 mutant


title: PA1578-2


title: PA1550-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1550.xlsx

value: PA1550 mutant


title: PA1530-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1530.xlsx

value: PA1530 mutant


title: PA1550-1


title: PA1530-1


title: PA2318-1


title: PA2229-30-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2229-30.xlsx

value: PA2229-30 mutant


title: PA1095-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1095.xlsx

value: PA1095 mutant


title: PA2228-2


title: PA1095-1


title: PA1093-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1093.xlsx

value: PA1093 mutant


title: PA2229-30-2


title: PA1093-1


title: PA2044-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2044.xlsx

value: PA2044 mutant


title: PA1006-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1006.xlsx

value: PA1006 mutant


title: PA0788-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0788.xlsx

value: PA0788 mutant


title: PA1006-2

value: Pseudomonas aeruginosa PAO1


title: PA0596-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0596.xlsx

value: PA0596 mutant


title: PA0788-1


title: PA0596-1


title: PA0563-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0563.xlsx

value: PA0563 mutant


title: PA0563-1


title: PA0539-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0539.xlsx

value: PA0539 mutant


title: PA0539-1


title: PA0529-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0529.xlsx

value: PA0529 mutant


title: PA0529-1


title: PA0446-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0446.xlsx

value: PA0446 mutant


title: PA0309-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0309.xlsx

value: PA0309 mutant


title: PA0446-1

value: grow until mid-log phase in LB


title: PA1788-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1788.xlsx

value: PA1788 mutant


title: PA0309-1


title: PA0589-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0589.xlsx

value: PA0589 mutant


title: PA0307-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0307.xlsx

value: PA0307 mutant


title: PA0244-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0244.xlsx

value: PA0244 mutant


title: PA0244-1


title: PA0049-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0049.xlsx

value: PA0049 mutant


title: PA0307-1


title: PA1788-1


title: PA0049-1


title: PA4924-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4924.xlsx

value: PA4924 mutant


title: PA4924-1


title: PA3897-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3897.xlsx

value: PA3897 mutant


title: PA3897-1


title: PA0359-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0359.xlsx

value: PA0359 mutant


title: PA3663-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3663.xlsx

value: PA3663 mutant


title: PA3663-1

value: Pseudomonas aeruginosa PAO1


title: PA3263-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3263.xlsx

value: PA3263 mutant


title: PA1567-68-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1567-68.xlsx

value: PA1567-68 mutant


title: PA3263-1


title: PA1567-68-1


title: PA1516-17-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1516-17.xlsx

value: PA1516-17 mutant


title: PA1516-17-1


title: PA1508-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1508.xlsx

value: PA1508 mutant


title: PA1508-1


title: PA0276-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0276.xlsx

value: PA0276 mutant


title: PA1503-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1503.xlsx

value: PA1503 mutant


title: PA1503-2

value: grow until mid-log phase in LB


title: PA1501-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1501.xlsx

value: PA1501 mutant


title: PA1501-1


title: PA1325-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1325.xlsx

value: PA1325 mutant


title: PA1325-1


title: PA1314-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1314.xlsx

value: PA1314 mutant


title: PA1314-1


title: PA1299-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1299.xlsx

value: PA1299 mutant


title: PA1299-2


title: PA1289-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1289.xlsx

value: PA1289 mutant


title: PA1289-1


title: PA1274-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1274.xlsx

value: PA1274 mutant


title: PA1274-1


title: PA1211-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1211.xlsx

value: PA1211 mutant


title: PA1211-1


title: PA1198-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1198.xlsx

value: PA1198 mutant


title: PA1198-2


title: PA1011-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1011.xlsx

value: PA1011 mutant


title: PA0968-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0968.xlsx

value: Pseudomonas aeruginosa PAO1

value: PA0968 mutant


title: PA1011-1


title: PA0968-1


title: PA0922-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0922.xlsx

value: PA0922 mutant


title: PA0922-1


title: PA0874-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0874.xlsx

value: PA0874 mutant


title: PA0874-1


title: PA0729-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0729.xlsx

value: PA0729 mutant


title: PA0497-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0497.xlsx

value: PA0497 mutant


title: PA0497-1


title: PA0729-2


title: PA0277-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0277.xlsx

value: PA0277 mutant


title: PA0277-2

value: grow until mid-log phase in LB


title: PA0128-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0128.xlsx

value: PA0128 mutant


title: PA0128-1


title: PA2431-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2431.xlsx

value: PA2431 mutant


title: PA2431-1


title: PA2597-00-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2597-00.xlsx

value: PA2597-00 mutant


title: PA2597-00-1


title: PA2604-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2604.xlsx

value: PA2604 mutant


title: PA2604-1


title: PA2669-71-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2669-71.xlsx

value: PA2669-71 mutant


title: PA2669-71-1


title: PA2713-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2713.xlsx

value: PA2713 mutant


title: PA2768-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2768.xlsx

value: PA2768 mutant


title: PA2713-1


title: PA2768-1


title: PA2845-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2845.xlsx

value: PA2845 mutant


title: PA2845-1


title: PA3580-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3580.xlsx

value: PA3580 mutant


title: PA3580-1

value: Pseudomonas aeruginosa PAO1


title: PA3600-01-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3600-01.xlsx

value: PA3600-01 mutant


title: PA3600-01-1


title: PA3911-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3911.xlsx

value: PA3911 mutant


title: PA3911-1


title: PA3919-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3919.xlsx

value: PA3919 mutant


title: PA3919-1


title: PA4018-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4018.xlsx

value: PA4018 mutant


title: PA4018-1


title: PA4118-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4118.xlsx

value: PA4118 mutant


title: PA4118-1


title: PA4540-41-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4540-41.xlsx

value: PA4540-41 mutant


title: PA4540-41-1

value: grow until mid-log phase in LB


title: PA4852-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4852.xlsx

value: PA4852 mutant


title: PA5024-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA5024.xlsx

value: PA5024 mutant


title: PA5024-1


title: PA1972-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1972.xlsx

value: PA1972 mutant


title: PA1972-1


title: PA1914-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1914.xlsx

value: PA1914 mutant


title: PA1914-1


title: PA1605-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1605.xlsx

value: PA1605 mutant


title: PA4852-2


title: PA1605-2


title: PA1478-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1478.xlsx

value: PA1478 mutant


title: PA1478-1


title: PA1203-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1203.xlsx

value: PA1203 mutant


title: PA1203-1


title: PA0959-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0959.xlsx

value: PA0959 mutant


title: PA0959-1


title: PA0812-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0812.xlsx

value: PA0812 mutant


title: PA0751-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0751.xlsx

value: Pseudomonas aeruginosa PAO1

value: PA0751 mutant


title: PA0812-1


title: PA0751-1


title: PA0734-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0734.xlsx

value: PA0734 mutant


title: PA0734-1


title: PA0285-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0285.xlsx

value: PA0285 mutant


title: PA0285-1


title: PA0007-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA0007.xlsx

value: PA0007 mutant


title: PA0007-2


title: PA4634-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4634.xlsx

value: PA4634 mutant


title: PA4382-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4382.xlsx

value: PA4382 mutant


title: PA4634-1

value: grow until mid-log phase in LB


title: PA4382-1


title: PA3380-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3380.xlsx

value: PA3380 mutant


title: PA3380-1


title: PA3248-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3248.xlsx

value: PA3248 mutant


title: PA3248-2


title: PA2448-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2448.xlsx

value: PA2448 mutant


title: PA2448-1


title: PA2260-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2260.xlsx

value: PA2260 mutant


title: PA2260-2


title: PA1424-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1424.xlsx

value: PA1424 mutant


title: PA1424-1


title: PA4734-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4734.xlsx

value: PA4734 mutant


title: PA4734-1


title: PA4629-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4629.xlsx

value: PA4629 mutant


title: PA4629-1


title: PA4518-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4518.xlsx

value: PA4518 mutant


title: PA4507-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4507.xlsx

value: PA4507 mutant


title: PA4518-1

value: Pseudomonas aeruginosa PAO1


title: PA4507-1


title: PA4474-76-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4474-76.xlsx

value: PA4474-76 mutant


title: PA4474-76-1


title: PA4473-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4473.xlsx

value: PA4473 mutant


title: PA4473-1


title: PA4452-54-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4452-54.xlsx

value: PA4452-54 mutant


title: PA4452-54-1


title: PA4437-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4437.xlsx

value: PA4437 mutant


title: PA4437-2


title: PA4422-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4422.xlsx

value: PA4422 mutant


title: PA4422-2


title: PA4404-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4404.xlsx

value: PA4404 mutant


title: PA4404-2

value: grow until mid-log phase in LB


title: PA4399-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4399.xlsx

value: PA4399 mutant


title: PA4399-1


title: PA4394-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4394.xlsx

value: PA4394 mutant


title: PA4394-1


title: PA4391-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4391.xlsx

value: PA4391 mutant


title: PA4391-1


title: PA4390-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4390.xlsx

value: PA4390 mutant


title: PA4384-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4384.xlsx

value: PA4384 mutant


title: PA4390-1


title: PA4384-1


title: PA4371-73-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4371-73.xlsx

value: PA4371-73 mutant


title: PA4362-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4362.xlsx

value: PA4362 mutant


title: PA4371-73-1


title: PA4362-1


title: PA4338-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4338.xlsx

value: PA4338 mutant


title: PA4338-1


title: PA4340-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4340.xlsx

value: PA4340 mutant


title: PA3969-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3969.xlsx

value: Pseudomonas aeruginosa PAO1

value: PA3969 mutant


title: PA3962-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3962.xlsx

value: PA3962 mutant


title: PA3962-2


title: PA3943-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3943.xlsx

value: PA3943 mutant


title: PA3886-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3886.xlsx

value: PA3886 mutant


title: PA3943-1


title: PA3886-1


title: PA3884-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3884.xlsx

value: PA3884 mutant


title: PA3884-1


title: PA3848-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3848.xlsx

value: PA3848 mutant


title: PA3848-1

value: grow until mid-log phase in LB


title: PA3846-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3846.xlsx

value: PA3846 mutant


title: PA3846-1


title: PA3843-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3843.xlsx

value: PA3843 mutant


title: PA3843-2


title: PA3829-1

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3829.xlsx

value: PA3829 mutant


title: PA3829-2


title: PA3796-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3796.xlsx

value: PA3796 mutant


title: PA3796-1


title: HS_V_rep1

city: Charleston

first: Ozgur

last: Sahin

state: SC

address: 86 Jonathan Lucas Street HO703

country: USA

institute: Medical University of South Carolina

description:
Library name: S19_Hs_V1_2_3280625
Label: Hs-V1. Cell line: Hs578-T. LOX inhibition: Vehicle

data_processing:
Raw paired reads were use to quantify transcript abundances using Kallisto v0.46.1 (parameters: –-rf-stranded) [PMID: 37432342].
Transcript information was obtain from Ensembl (release 111) [PMID: 37953337].
Transcript-level abundance estimates were collapse to the gene level using the ‘‘tximport’’ and count matrices were created, genes with a mean smaller than 30 counts were remove [PMID: 26925227].
Differentially expressed genes were identify using DESeq2 (shrinkage type = apeglm), p-values were adjusted for multiple testing using the Independent Hypothesis Weighting procedure [PMID: 25516281 and 27240256].
Gene set enrichment analysis was performed with the R package fgsea and the Hallmark gene collection [PMID: 12808457, 16199517].
Assembly: GRCh38
Supplementary files format and content: Hs578_T_vehicle_vs_Hs578_T_24h_6403_DEG_by_DESeq2.csv, DESeq2 output.
Supplementary files format and content: MDA_231_vehicle_vs_MDA_231_24h_6403_DEG_by_DESeq2.csv, DESeq2 output.
Supplementary files format and content: MDA_436_vehicle_vs_MDA_436_24h_6403_DEG_by_DESeq2.csv, DESeq2 output.

molecule: total RNA

growth_protocol: Cells were grown in DMEM with 10% FBS, 1% P/S and 1% non-essential aminoacids.

extract_protocol:
Cells were extracted using Quick-RNA Miniprep Kit (Zymo)
Library preparation was performed using NEBNext Ultra II Directional RNA Library Prep Kit for Illumina (E7760L) according to manufacturer's instructions.

treatment_protocol: MDA-MB-436, HS578T and MDA-MB-231 cells were treated with LXG6403 (LOX inhibitor) for 24 hours.

tag: cell line

value: WT

value: Vehicle


title: HS_24h_rep2

description:
Library name: S26_Hs_24h_2_2_3280632
Label: Hs-24h-2. Cell line: Hs578-T. LOX inhibition: 24h_6403


title: PA3789-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3789.xlsx

value: PA3789 mutant


title: HS_24h_rep1

description:
Library name: S25_Hs_24h_1_2_3280631
Label: Hs-24h-1. Cell line: Hs578-T. LOX inhibition: 24h_6403


title: PA3789-1


title: MDA_436_V_rep2

description:
Library name: S18_436_V2_2_3280624
Label: 436-V2. Cell line: MDA-436. LOX inhibition: Vehicle


title: PA3784-85-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA3784-85.xlsx

value: PA3784-85 mutant


title: MDA_436_V_rep1

description:
Library name: S17_436_V1_2_3280623
Label: 436-V1. Cell line: MDA-436. LOX inhibition: Vehicle


title: PA3784-85-1


title: MDA_436_24h_rep2

description:
Library name: S24_436_24h_2_2_3280630
Label: 436-24h-2. Cell line: MDA-436. LOX inhibition: 24h_6403


title: MDA_436_24h_rep1

description:
Library name: S23_436_24h_1_2_3280629
Label: 436-24h-1. Cell line: MDA-436. LOX inhibition: 24h_6403


title: PA2786-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2786.xlsx

value: PA2786 mutant


title: PA2786-1

value: Pseudomonas aeruginosa PAO1


title: MDA_231_V_rep2

description:
Library name: S16_231_V2_2_3280622
Label: 231-V2. Cell line: MDA-231. LOX inhibition: Vehicle


title: PA2727-28-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2727-28.xlsx

value: PA2727-28 mutant


title: MDA_231_V_rep1

description:
Library name: S15_231_V1_2_3280621
Label: 231-V1. Cell line: MDA-231. LOX inhibition: Vehicle


title: PA2727-28-1


title: MDA_231_24h_rep2

description:
Library name: S22_231_24h_2_2_3280628
Label: 231-24h-2. Cell line: MDA-231. LOX inhibition: 24h_6403


title: PA2722-24-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2722-24.xlsx

value: PA2722-24 mutant


title: MDA_231_24h_rep1

description:
Library name: S21_231_24h_1_2_3280627
Label: 231-24h-1. Cell line: MDA-231. LOX inhibition: 24h_6403


title: PA2722-24-1


title: PA2548-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2548.xlsx

value: PA2548 mutant


title: 9_9h_IFN1

city: Tokyo

first: Ruslan

last: Deviatiiarov

address: Hongo 2-1-1, Bunkyo-ku

department: Intractable Disease Research Center

country: Japan

institute: Juntendo University

description: Library name: Sample9

data_processing:
Reads were quality-checked using FastQC v0.11.5 and trimmed using fastx_trimmer (FASTX Toolkit v0.0.14).
Adapter sequences, rRNA contamination, and ambiguous reads were removed using Trimmomatic v0.38, RNAdust v1.06, and removeN (Moirai).
Filtered reads were aligned to the UCSC mm39 genome assembly using BWA v0.7.10, and unmapped reads were subsequently aligned using HISAT2 v2.1.0.
CAGE peaks and transcription start sites (TSSs) were identified using PromoterPipeline (Kouno et al. 2019) and assigned to nearby genes (Deviatiiarov et al. 2023). Enhancers were predicted based on CAGE signal directionality and linked to promoters as described previously (Andersson et al. 2014).
Assembly: mm39
Supplementary files format and content: Tables with coordinates, assigned genes, and read counts (raw or TPM normalized) for promoters and enhancers

organism: Mus musculus

source_name: bone marrow derived macrophages

growth_protocol: Bone marrow cells were isolated from femurs and tibias of C57BL/6 mice and cultured for 7 days in DMEM supplemented with 10% fetal calf serum (FCS), 1× non-essential amino acids, 1 mM sodium pyruvate, 100 U/mL penicillin–streptomycin, and 0.05 µM 2-mercaptoethanol. Macrophage differentiation was induced by macrophage colony-stimulating factor (M-CSF, 10 U/mL) supplied through conditioned medium from human M-CSF–expressing L929 cells. To induce M2-like polarization, BMDMs were treated with recombinant mouse IL-4 (50 ng/mL; Cat#574302) and IL-10 (50 ng/mL; Cat#575802) (BioLegend, San Diego, CA, USA) for 24 h.

extract_protocol:
Total RNA was extracted using TRIzol reagent (Invitrogen).
nAnTi-CAGE libraries were prepared from 5 µg total RNA according to the manufacturer’s protocol (DNAFORM, Yokohama, Japan)

treatment_protocol: For stimulation experiments, BMDMs were seeded at 5 × 10⁴ cells per well in 48-well plates and treated for 24 h with recombinant mouse IFN-γ (100 ng/mL; Cat#575308, BioLegend), CpG ODN-1826 (0.25 µg/mL; 5′-TCCATGACGTTCCTGACGTT-3′; Hokkaido System Science, Sapporo, Japan), or their combination.

tag: cell type

value: bone marrow derived macrophages

tag: treatment time

value: IFN


title: 8_3h_IFN_plus_CPG2

description: Library name: Sample8

value: IFN+CPG


title: PA2548-1

value: grow until mid-log phase in LB


title: 7_3h_IFN_plus_CPG1

description: Library name: Sample7


title: PA2498-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2498.xlsx

value: PA2498 mutant


title: 6_3h_CPG2

description: Library name: Sample6

value: CPG


title: PA2498-1


title: PA4340-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA4340.xlsx

value: PA4340 mutant


title: 5_3h_CPG1

description: Library name: Sample5


title: PA2122-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2122.xlsx

value: PA2122 mutant


title: PA2122-1


title: 4_3h_IFN2

description: Library name: Sample4


title: 3_3h_IFN1

description: Library name: Sample3


title: 2_Ctr2

description: Library name: Sample2

value: control


title: PA2117-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2117.xlsx

value: PA2117 mutant


title: PA2117-1


title: 20_15h_IFN_plus_CPG2

description: Library name: Sample20


title: 1_Ctr1

description: Library name: Sample1


title: in vitro fertilization 32 days, sample 4

type: RNA

city: Araçatuba

first: Flavia

middle: Lombardi

last: Lopes

state: São Paulo

address: Rua Clovis Pestana, 793

department: DAPSA

country: Brazil

institute: FMVA-UNESP

hyb_protocol: Hybridization to the Affymetrix® miRNA 4.1 Array strips was carried out at 48ºC for 20 hours

scan_protocol: GeneAtlas® System (Affymetrix)

data_processing: Raw intensity values were background corrected, log2 transformed and then quantile normalized by the software Transcriptome Analysis Console (TAC) 4.0.1 (Thermo Fisher Scientific Co.) using the Robust Multi-array Average (RMA) algorithm

label: biotin

organism: Bos taurus

source_name: in vitro fertilization 32 days

label_protocol: Total RNA (500 ng/sample) was labeled using the FlashTag™ Biotin HSR RNA Labeling Kit (Thermo Fisher Scientific Co.), according to the manufacturer’s instructions

growth_protocol: Samples were kept in RNAlater (Thermo Fisher Scientific®) before RNA extraction

extract_protocol: Total RNA was extracted using the miRVana kit from Thermo Fisher Scientific Co.

treatment_protocol: Animal handling and sample collection were conducted at the Experimental Station Hildegard Georgina Von Pritzelwiltz in Londrina, PR, Brazil, with approval from the Animal Research Ethics Committee of ESALQ/USP (Protocol #2018.5.1252.11.5, CEUA nº 2018-21). Non-lactating Nelore cows (Bos taurus indicus) with an average body condition score (BCS) of 3.0 ± 0.04 were selected and synchronized using a timed-AI protocol with estradiol benzoate. Artificial insemination (AI) and in vitro embryo production (IVF) were performed using semen from a single Angus bull (Bos taurus taurus). On day 0, cows in the AI group were inseminated, while embryos were transferred to the IVF group on day 6.5. Slaughter took place on days 18 and 32 after AI and on days 12 and 26 post-embryo transfer (IVF group), representing key periods for maternal recognition (18 days) and early placental attachment (32 days). After slaughter, the reproductive tracts were immediately removed and kept on ice. On day 18, uterine horns were flushed with a saline solution to confirm pregnancy by embryo presence; on day 32, pregnancy was diagnosed via ultrasonography one day prior. Uterine fluid from 16 cows was collected and centrifuged to isolate extracellular vesicles, classified by size and concentration for AI and IVF on days 18 and 32. Samples from day 18 of the estrous cycle served as controls. These samples were kept in RNAlater (Thermo Fisher Scientific®) at 4ºC overnight and then stored at -80ºC. RNA extraction was performed using the mirVana™ miRNA Isolation Kit (Thermo Fisher Scientific®), according to manufacturer’s instructions.Microarray was conducted with 16 samples (n=4 treatment/grup).

value: extracellular vesicles


title: 19_15h_IFN_plus_CPG1

description: Library name: Sample19


title: 18_15h_CPG2

description: Library name: Sample18


title: PA2107-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2107.xlsx

value: PA2107 mutant


title: in vitro fertilization 32 days, sample 3


title: 17_15h_CPG1

description: Library name: Sample17


title: in vitro fertilization 32 days, sample 2


title: PA2107-1


title: 16_15h_IFN2

description: Library name: Sample16


title: 15_15h_IFN1

description: Library name: Sample15


title: HS_V_rep2

description:
Library name: S20_Hs_V2_2_3280626
Label: Hs-V2. Cell line: Hs578-T. LOX inhibition: Vehicle

value: WT

value: Vehicle


title: PA2043-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA2043.xlsx

value: Pseudomonas aeruginosa PAO1

value: PA2043 mutant


title: in vitro fertilization 32 days, sample 1


title: 14_9h_IFN_plus_CPG2

description: Library name: Sample14


title: 13_9h_IFN_plus_CPG1

description: Library name: Sample13


title: PA2043-1


title: in vitro fertilization 18 days, sample 4

source_name: in vitro fertilization 18 days


title: 12_9h_CPG2

description: Library name: Sample12


title: in vitro fertilization 18 days, sample 3


title: PA1817-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1817.xlsx

value: PA1817 mutant


title: 10_9h_IFN2

description: Library name: Sample10

value: bone marrow derived macrophages


title: in vitro fertilization 18 days, sample 2


title: scRNA-seq of renal cortex from T1DM mouse #4

city: Putian

first: Ruiyuan

last: Chen

state: Fujian

address: Fujian

country: China

institute: Taizhou University

description:
Library name: DM
Genomics

library_source: transcriptomic single cell

data_processing:
Raw reads were filtered to remove poly T-containing reads. Cell barcodes and UMIs were extracted. Adapters and poly-A tails were trimmed using fastp. Reads were aligned to the Mus musculus reference genome (GRCm38, Ensembl v92) using STAR or featureCounts. UMI counts were generated and cells were filtered and clustered using Seurat (v3.0.1). Differential gene expression and pathway enrichment analyses were performed using Seurat and clusterProfiler.
Assembly: GRCm38 (Ensembl release 92)
Supplementary files format and content: The processed data files include:  - A gene expression matrix in Matrix Market format (.mtx) - Cell metadata file (.tsv) containing cell barcodes and annotations - Gene annotation file (.tsv) listing Ensembl IDs and gene names  These files represent the filtered expression profiles of individual cells after quality control and normalization.

source_name: renal cortex

extract_protocol:
Renal cortex tissues were dissected, minced, and enzymatically dissociated using 150 U/mL collagenase II, 0.2% collagenase IV, 1.2 U/mL Dispase II, and 500 U/mL DNase I at 37°C for 45 minutes. The resulting single-cell suspension was filtered through 70 μm and 35 μm cell strainers and resuspended in PBS.
Single-cell libraries were constructed using the Singleron GEXSCOPE® Single-Cell RNA Library Kit according to the manufacturer's instructions. Libraries were quantified, pooled, and sequenced using the Illumina HiSeq X Ten platform with 150 bp paired-end reads.

value: renal cortex

tag: group

value: Disease model


title: scRNA-seq of renal cortex from T1DM mouse #1

description:
Library name: Ctrl
Genomics

value: Control


title: PA1766-2

description:
paired-end RNA-seq data of Pseudomonas aeruginosa PAO1
PA1766.xlsx

value: PA1766 mutant

value: grow until mid-log phase in LB


title: in vitro fertilization 18 days, sample 1


title: PA1817-1