title: total RNA-seq from HG02588 (ENCLB977FGC)

description:
https://www.encodeproject.org/experiments/ENCSR764ILD/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR764ILD
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB977FGC
nucleic acid starting quantity: 25
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG02588 cell line

value: HG02588 LCLs; Donor from the Gambian in Western Divisions in the Gambia (GWD)

value: male

value: unknown

value: ENCBS281MYW at ENCODE; https://www.encodeproject.org/ENCBS281MYW/

value: Derived from ENCODE donor ENCDO157KKR; https://www.encodeproject.org/ENCDO157KKR/


title: CasTuner sgZfp36l1 ctrl Day4 Rep2

status: Public on Jul 25 2026

type: SRA

city: Berlin

first: Edda

middle: G.

last: Schulz

state: Berlin

address: Ihnestrasse 63

department: Otto-Warburg-Laboratory

country: Germany

institute: Max Planck Institute for Molecular Genetics

description:
Library name: sgZfp36l1_ctrl_D4_Rep2
500nM dTAG

library_source: genomic

data_processing:
Sequencing reads were trimmed with Trim Galore, with [--clip_R1 10 --three_prime_clip_R1 5 --clip_R2 15 --three_prime_clip_R2 5 --paired].
They were mapped using bsmapz with settings -m 0 -g 3 -n 1 -v 0.1 -w 10 to the reference fasta file that contains the amplicon sequences.
bam files were sorted and indexed with samtools, and merged if the sample was sequenced multiple times.
bam files were used for methylation calling by mcall command of MOABS package (Sun et al, 2014) [--trimWGBSEndRepairPE2Seq 0 --trimWGBSEndRepairPE1Seq 0 --reportCHX 0].
Assembly: mm10
Supplementary files format and content: bed files with MOABS methylation calls.

molecule: genomic DNA

organism: Mus musculus

source_name: Embryonic stem cells

growth_protocol: TX1072 mouse ES cells and all derived cell lines were cultured in feeder-free 2i/FBS/LIF conditions (DMEM (Sigma-Aldrich D6429), 15% ES cell-grade foetal bovine serum (FBS, Pan Biotech P30-2602), 0.1 mM β-mercaptoethanol, 1000 U/mL LIF (Millipore), 3 mM GSK3 inhibitor CT-99021 (Axon Medchem) and 1 mM MEK inhibitor PD0325901 (Axon Medchem)). For CasTuner lines, 500nM dTAG-13 was added to the medium. They were plated at a density of 3.2 × 10^4 cells per cm^2 on gelatin-coated T25 flasks (Corning). The medium was changed daily, and the cells were split every two days.  WT F121.9 mouse ESCs and the derived deletion cell lines Rnf12-/- and Rnf12 -/- Rex1 -/- (DKO) were adapted to feeder-free 2i/LIF conditions (DMEM (GIBCO 11995065), 15% ES cell-grade foetal bovine serum (FBS, Pan Biotech P30-2602), 100 U/mL penicillin/streptomycin (Thermo Fisher Scientifc), 1x NEAA (Gibco 11140035), 0.1 mM β-mercaptoethanol, 1000 U/mL LIF (Millipore), 3 mM GSK3 inhibitor CT-99021 (Axon Medchem) and 1 mM MEK inhibitor PD0325901 (Axon Medchem)) for 5 passages. They were plated at a density of 3.2 × 10^4 cells per cm^2 on gelatin-coated T25 plates (Corning). The medium was changed daily, and the cells were split every two days.

extract_protocol:
Genomic DNA was extracted from harvested cells using the DNeasy Blood & Tissue kit (Qiagen). 1μg of DNA were bisulfite-converted with EZ DNA Methylation-Gold kit (Zymo). One fifth of the eluted DNA was used per amplicon PCR. Primers for bisulfite-converted DNA targeting the Xist-promoter proximal CpG island (chrX:103,482,090-103,482,350 mm10 from UCSC Genome Browser) were designed with MethPrimer2.0 (Li & Dahiya, 2002). PCR was performed with EpiTaq polymerase (Takara), using 25mM MgCl2. DNA was amplified for 27 cycles, at an annealing temperature of 53oC. PCR reactions of each sample were pooled (total volume for Xist amplicons) and cleaned with MinElute Reaction Cleanup kit (Qiagen) (2 columns per sample).
Libraries were prepared with NEBNext Ultra II DNA Library Prep kit (New England Biolabs), indexed with NEBNext Multiplex Oligos for Illumina Dual Index Set 1 (New England Biolabs) and cleaned with AMPure XP beads (Beckman Coulter). Concentration and size distribution of libraries were analyzed with Qubit 1x dsDNA HS (Thermo Fisher Scientific) and HS DNA D1000 Tapestation (Agilent), respectively. Libraries were sequenced 2x150bp paired-end with MiSeq, DNBSEQ G400 or Aviti sequencers.

treatment_protocol: Differentiation of all cell lines was induced by 2i/LIF withdrawal (DMEM (Sigma-Aldrich), 10% FBS (Gibco) and 0.1 mM β-mercaptoethanol). The cells were plated at a density of 2.1 × 10^4 cells per cm^2, on 6-well plates coated with 10 μg/mL fibronectin (Corning 356008 or Serva 21370.03) in PBS for 1 hour. Once seeded for differentiation, the medium was changed every day and the cells were not split until harvesting.  For the knock-down of Zfp36l1 and Zfp280c, the CasTuner system was induced with dTAG-13 removal for 6 days in total, the last 4 of which differentiation was also induced. The control condition was cultured with dTAG-13 and differentiated for 4 days. To knock-down the transcription of Rex1 and Zfp281, the dCas9-KRAB system was induced with ABA for 5 days in total, the last 4 of which differentiation was also induced. The safe-targeting control line with “STC” guides was cultured in the same conditions as the knock-down cell lines. To knock-down the transcription of Rnf12 and Zic3, the CasTuner system was induced by dTAG-13 removal for 7 days in total, and during the last 3 days differentiation was induced. The control condition was cultured with dTAG-13 and differentiated for 3 days.

tag: tissue

value: Embryonic stem cells

tag: cell line

tag: cell type

tag: genotype

value: CAST x C57BL/6

tag: treatment

value: Differentiation by 2i/LIF withdrawal, dTAG-13 for CasTuner degradation

tag: timepoint

value: Differentiation Day 4


title: V250-CGND-HRA-03189-B

status: Public on Jul 24 2026

city: New York

first: Christopher

last: Jackson

state: NY

address: 101 Avenue of the Americas

department: Center for the Genomics of Neurodegenerative Disease

country: USA

institute: New York Genome Center

description: Library name: V250-CGND-HRA-03189-B

library_source: transcriptomic

data_processing:
Each sequenced 10X Visium library was aligned to a standard reference genome (hg38; GENCODE v32/Ensembl98) and counted with spaceranger
Assembly: hg38
Supplementary files format and content: filtered_feature_bc_matrix.h5 file contains spaceranger counts in spaceranger h5 format
Supplementary files format and content: spatial.tar file contains slide images and spot & scaling metadata from spaceranger outs/spatial
Library strategy: Spatial Transcriptomics

molecule: polyA RNA

organism: Homo sapiens

extract_protocol:
Frozen tissue blocks, kept at -80°C prior to processing, were equilibrated to -16°C inside a Leica CM3050S cryostat, embedded in Tissue Plus OCT Compound (Fisher Healthcare, #4585), and sectioned in a perpendicular orientation with regard to the pial surface. Tissue sections (10 µm-thick) from quality controlled blocks (H&E staining and imaging) were collected onto prechilled Visium Spatial Gene Expression Slides (10X Genomics, #1000185) while briefly warming the back of the slide with a gloved finger to improve adherence and minimize artifacts.
Visium libraries were prepared using unique Illumina-compatible PCR primers with Dual Index Kit TT Set A (10X Genomics, #1000215). Size distribution profiles of the final libraries were assessed by running Agilent High Sensitivity DNA chips (#5067-4626) on a 2100 Bioanalyzer system (Agilent, #G2939BA). Libraries outside the expected range (450 ± 50 bp) or that contained adapter dimer contaminants were discarded and reprocessed. Total yields were initially measured on a Qubit 3.0 fluorometer before final qPCR quantification (KAPA Library Quantification Kit for Illumina Platforms, KAPA Biosystems, #KK4824).

tag: subject id

tag: diagnosis

value: ALS

tag: pmi

tag: Sex

value: F

tag: age

tag: rin


title: total RNA-seq from GM19455 (ENCLB114KBU)

city: Stanford

first: ENCODE

last: DCC

state: CA

address: 300 Pasteur Dr

institute: ENCODE DCC

description:
https://www.encodeproject.org/experiments/ENCSR876BFJ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR876BFJ
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB114KBU
nucleic acid starting quantity: 31
nucleic acid starting quantity units: µg

data_processing: See GSM*_README.txt supplementary file linked below

molecule: total RNA

source_name: Homo sapiens GM19455 cell line

extract_protocol: not provided

tag: line

value: cell line

tag: description

value: GM19455 LCLs; Donor from the Luhya in Webuye, Kenya (LWK)

tag: biosample encode accession

tag: dev stage

value: adult

tag: lab

value: Stephen Montgomery, Stanford

tag: source

value: Coriell

tag: link

value: ENCBS493SWN at ENCODE; https://www.encodeproject.org/ENCBS493SWN/

value: Derived from ENCODE donor ENCDO765HXB; https://www.encodeproject.org/ENCDO765HXB/


title: total RNA-seq from GM19472 (ENCLB676TUQ)

description:
https://www.encodeproject.org/experiments/ENCSR763ULK/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR763ULK
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB676TUQ
nucleic acid starting quantity: 36
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM19472 cell line

tag: encode accession

tag: note

value: GM19472 LCLs; Donor from the Luhya in Webuye, Kenya (LWK)

value: female

value: ENCBS240URK at ENCODE; https://www.encodeproject.org/ENCBS240URK/


title: V341-CGND-HRA-03055-2-D

description: Library name: V341-CGND-HRA-03055-2-D

tag: tissue


title: total RNA-seq from GM21403 (ENCLB784YWR)

description:
https://www.encodeproject.org/experiments/ENCSR763FJK/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR763FJK
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB784YWR
nucleic acid starting quantity: 39
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21403 cell line

value: GM21403 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: ENCBS422NDC at ENCODE; https://www.encodeproject.org/ENCBS422NDC/


title: V271-CGND-HRA-02412-C

description: Library name: V271-CGND-HRA-02412-C

value: M


title: total RNA-seq from GM19435 (ENCLB573ZEM)

description:
https://www.encodeproject.org/experiments/ENCSR761GMR/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR761GMR
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB573ZEM
nucleic acid starting quantity: 29
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM19435 cell line

value: GM19435 LCLs; Donor from the Luhya in Webuye, Kenya (LWK)

value: ENCBS760LJR at ENCODE; https://www.encodeproject.org/ENCBS760LJR/


title: V249-CGND-HRA-02511-D

description: Library name: V249-CGND-HRA-02511-D

value: ALS Spectrum MND, Other Neurological Disorders


title: V250-CGND-HRA-03189-A

description: Library name: V250-CGND-HRA-03189-A

value: ALS

value: F


title: total RNA-seq from GM21744 (ENCLB821JNM)

description:
https://www.encodeproject.org/experiments/ENCSR758CZU/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR758CZU
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB821JNM
nucleic acid starting quantity: 41
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21744 cell line

value: cell line

value: GM21744 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: male

value: ENCBS536MOH at ENCODE; https://www.encodeproject.org/ENCBS536MOH/


title: V249-CGND-HRA-02511-C

description: Library name: V249-CGND-HRA-02511-C


title: total RNA-seq from GM19307 (ENCLB542QJN)

description:
https://www.encodeproject.org/experiments/ENCSR757SIB/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR757SIB
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB542QJN
nucleic acid starting quantity: 24
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM19307 cell line

value: GM19307 LCLs; Donor from the Luhya in Webuye, Kenya (LWK)

value: adult

value: Stephen Montgomery, Stanford

value: Coriell

value: ENCBS565YLV at ENCODE; https://www.encodeproject.org/ENCBS565YLV/


title: V249-CGND-HRA-02171-B

description: Library name: V249-CGND-HRA-02171-B


title: total RNA-seq from HG03039 (ENCLB269ZLX)

description:
https://www.encodeproject.org/experiments/ENCSR757QTE/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR757QTE
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB269ZLX
nucleic acid starting quantity: 48
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG03039 cell line

value: HG03039 LCLs; Donor from the Gambian in Western Divisions in the Gambia (GWD)

value: unknown

value: ENCBS630RUV at ENCODE; https://www.encodeproject.org/ENCBS630RUV/

value: Derived from ENCODE donor ENCDO227PML; https://www.encodeproject.org/ENCDO227PML/


title: XX 24h Rep3

description: Library name: XX_T24_Rep3

growth_protocol: TX1072 mouse ES cells were cultured in feeder-free 2i/FBS/LIF conditions (DMEM (Sigma-Aldrich), 15% ES cell-grade foetal bovine serum (FBS, Pan Biotech P30-2602), 0.1  mM β-mercaptoethanol, 1000 U/mL LIF (Millipore), 3 mM GSK3 inhibitor CT-99021 (Axon Medchem) and 1 mM MEK inhibitor PD0325901 (Axon Medchem)). They were plated at a density of 3.2 × 10^4 cells per cm^2 on gelatin-coated T25 plates (Corning). The medium was changed daily, and the cells were split every two days.

treatment_protocol: Differentiation was induced by 2i/LIF withdrawal (DMEM (Sigma-Aldrich), 10% FBS (Gibco) and 0.1 mM β-mercaptoethanol). The cells were plated at a density of 2.1 × 10^4 cells per cm^2, on 6-well plates coated with 10 μg/mL fibronectin (Corning 356008 or Serva 21370.03) in PBS for 1 hour. Once seeded in differentiation conditions, the medium was changed daily and the cells were not split until harvesting.

value: Embryonic stem cells

tag: cell line

value: TX1072 XX

tag: cell type

tag: genotype

value: CAST x C57BL/6

tag: treatment

value: Differentiation by 2i/LIF withdrawal

tag: timepoint

value: 24 hours


title: V249-CGND-HRA-02171-A

description: Library name: V249-CGND-HRA-02171-A

tag: subject id

tag: diagnosis

value: ALS

tag: pmi

tag: Sex

value: F

tag: age


title: total RNA-seq from GM19328 (ENCLB652CMA)

description:
https://www.encodeproject.org/experiments/ENCSR756TOK/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR756TOK
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB652CMA
nucleic acid starting quantity: 34
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM19328 cell line

tag: line

value: cell line

tag: description

value: GM19328 LCLs; Donor from the Luhya in Webuye, Kenya (LWK)

tag: biosample encode accession

value: female

tag: dev stage

value: ENCBS392TNX at ENCODE; https://www.encodeproject.org/ENCBS392TNX/

value: Derived from ENCODE donor ENCDO257EQW; https://www.encodeproject.org/ENCDO257EQW/


title: total RNA-seq from GM21825 (ENCLB132QOD)

description:
https://www.encodeproject.org/experiments/ENCSR754MPP/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR754MPP
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB132QOD
nucleic acid starting quantity: 31
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21825 cell line

value: GM21825 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: adult

tag: lab

value: Stephen Montgomery, Stanford

tag: source

value: Coriell

tag: link

value: ENCBS657NWM at ENCODE; https://www.encodeproject.org/ENCBS657NWM/

value: Derived from ENCODE donor ENCDO596HKE; https://www.encodeproject.org/ENCDO596HKE/


title: total RNA-seq from GM18879 (ENCLB413KGL)

description:
https://www.encodeproject.org/experiments/ENCSR754UYG/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR754UYG
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB413KGL
nucleic acid starting quantity: 38
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM18879 cell line

tag: encode accession

tag: note

value: GM18879 LCLs; Donor from the Yoruba in Ibadan, Nigeria (YRI)

value: male

value: ENCBS194TVT at ENCODE; https://www.encodeproject.org/ENCBS194TVT/


title: total RNA-seq from HG02462 (ENCLB441QCL)

description:
https://www.encodeproject.org/experiments/ENCSR751ZPV/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR751ZPV
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB441QCL
nucleic acid starting quantity: 32
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG02462 cell line

value: HG02462 LCLs; Donor from the Gambian in Western Divisions in the Gambia (GWD)

value: ENCBS755TWR at ENCODE; https://www.encodeproject.org/ENCBS755TWR/


title: V248-CGND-HRA-02171-A

description: Library name: V248-CGND-HRA-02171-A

tag: tissue

value: ALS

value: F

tag: rin


title: total RNA-seq from GM19024 (ENCLB931XSI)

description:
https://www.encodeproject.org/experiments/ENCSR809PMO/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR809PMO
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB931XSI
nucleic acid starting quantity: 26
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM19024 cell line

value: cell line

value: GM19024 LCLs; Donor from the Luhya in Webuye, Kenya (LWK)

value: ENCBS160KZB at ENCODE; https://www.encodeproject.org/ENCBS160KZB/


title: total RNA-seq from GM21415 (ENCLB222VXL)

description:
https://www.encodeproject.org/experiments/ENCSR746MWO/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR746MWO
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB222VXL
nucleic acid starting quantity: 46
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21415 cell line

value: GM21415 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: female

value: ENCBS905YNJ at ENCODE; https://www.encodeproject.org/ENCBS905YNJ/


title: total RNA-seq from HG03577 (ENCLB983UBE)

description:
https://www.encodeproject.org/experiments/ENCSR750GPT/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR750GPT
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB983UBE
nucleic acid starting quantity: 30
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG03577 cell line

value: HG03577 LCLs; Donor from the Mende in Sierra Leone (MSL)

value: adult

value: Stephen Montgomery, Stanford

value: ENCBS463PAZ at ENCODE; https://www.encodeproject.org/ENCBS463PAZ/


title: V247-CGND-HRA-03195-C

description: Library name: V247-CGND-HRA-03195-C

value: M


title: V247-CGND-HRA-03195-D

description: Library name: V247-CGND-HRA-03195-D


title: V246-CGND-HRA-02451-A

description: Library name: V246-CGND-HRA-02451-A

value: ALS-FTD


title: V246-CGND-HRA-02451-B

description: Library name: V246-CGND-HRA-02451-B


title: total RNA-seq from GM21743 (ENCLB214ELP)

description:
https://www.encodeproject.org/experiments/ENCSR736GHI/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR736GHI
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB214ELP
nucleic acid starting quantity: 32
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21743 cell line

value: GM21743 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: male

value: Coriell

value: ENCBS278PUU at ENCODE; https://www.encodeproject.org/ENCBS278PUU/


title: total RNA-seq from HG03077 (ENCLB802UXU)

description:
https://www.encodeproject.org/experiments/ENCSR743UJB/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR743UJB
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB802UXU
nucleic acid starting quantity: 51
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG03077 cell line

value: HG03077 LCLs; Donor from the Mende in Sierra Leone (MSL)

value: ENCBS696LJT at ENCODE; https://www.encodeproject.org/ENCBS696LJT/


title: total RNA-seq from HG03301 (ENCLB494MPP)

description:
https://www.encodeproject.org/experiments/ENCSR735OOX/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR735OOX
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB494MPP
nucleic acid starting quantity: 26
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG03301 cell line

value: cell line

value: HG03301 LCLs; Donor from the Esan in Nigeria (ESN)

value: ENCBS966UQA at ENCODE; https://www.encodeproject.org/ENCBS966UQA/


title: V245-CGND-HRA-03040-A

description: Library name: V245-CGND-HRA-03040-A

value: ALS

value: F


title: total RNA-seq from GM18867 (ENCLB440KHE)

description:
https://www.encodeproject.org/experiments/ENCSR734TIT/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR734TIT
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB440KHE
nucleic acid starting quantity: 42
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM18867 cell line

value: GM18867 LCLs; Donor from the Yoruba in Ibadan, Nigeria (YRI)

value: female

value: unknown

value: ENCBS180AJA at ENCODE; https://www.encodeproject.org/ENCBS180AJA/

value: Derived from ENCODE donor ENCDO227ZDT; https://www.encodeproject.org/ENCDO227ZDT/


title: V245-CGND-HRA-02427-D

description: Library name: V245-CGND-HRA-02427-D

value: M


title: V245-CGND-HRA-02427-C

description: Library name: V245-CGND-HRA-02427-C


title: V244-CGND-HRA-03040-A

description: Library name: V244-CGND-HRA-03040-A


title: total RNA-seq from GM21400 (ENCLB322LZE)

description:
https://www.encodeproject.org/experiments/ENCSR734RDY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR734RDY
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB322LZE
nucleic acid starting quantity: 27
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21400 cell line

value: GM21400 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: adult

value: Stephen Montgomery, Stanford

value: ENCBS326WJD at ENCODE; https://www.encodeproject.org/ENCBS326WJD/


title: total RNA-seq from HG03225 (ENCLB738RXH)

description:
https://www.encodeproject.org/experiments/ENCSR725PAU/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR725PAU
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB738RXH
nucleic acid starting quantity: 31
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG03225 cell line

value: HG03225 LCLs; Donor from the Mende in Sierra Leone (MSL)

value: male

value: Coriell

value: ENCBS433RON at ENCODE; https://www.encodeproject.org/ENCBS433RON/


title: V244-CGND-HRA-02427-D

description: Library name: V244-CGND-HRA-02427-D


title: total RNA-seq from GM21576 (ENCLB295NDZ)

description:
https://www.encodeproject.org/experiments/ENCSR732QBN/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR732QBN
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB295NDZ
nucleic acid starting quantity: 31
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21576 cell line

value: cell line

value: GM21576 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: ENCBS793OSQ at ENCODE; https://www.encodeproject.org/ENCBS793OSQ/

value: Derived from ENCODE donor ENCDO044UFV; https://www.encodeproject.org/ENCDO044UFV/


title: total RNA-seq from GM21485 (ENCLB266ZSF)

description:
https://www.encodeproject.org/experiments/ENCSR725LYY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR725LYY
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB266ZSF
nucleic acid starting quantity: 44
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21485 cell line

value: GM21485 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: ENCBS570JBV at ENCODE; https://www.encodeproject.org/ENCBS570JBV/


title: total RNA-seq from HG03476 (ENCLB324MUB)

description:
https://www.encodeproject.org/experiments/ENCSR718AKC/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR718AKC
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB324MUB
nucleic acid starting quantity: 37
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG03476 cell line

value: HG03476 LCLs; Donor from the Mende in Sierra Leone (MSL)

value: female

value: ENCBS375TVN at ENCODE; https://www.encodeproject.org/ENCBS375TVN/


title: V244-CGND-HRA-02427-C

description: Library name: V244-CGND-HRA-02427-C

value: ALS

value: M


title: total RNA-seq from HG02771 (ENCLB918BYN)

description:
https://www.encodeproject.org/experiments/ENCSR717DMZ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR717DMZ
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB918BYN
nucleic acid starting quantity: 49
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG02771 cell line

value: HG02771 LCLs; Donor from the Gambian in Western Divisions in the Gambia (GWD)

value: adult

value: Stephen Montgomery, Stanford

value: ENCBS182MTA at ENCODE; https://www.encodeproject.org/ENCBS182MTA/


title: V243-CGND-HRA-02472-C

description: Library name: V243-CGND-HRA-02472-C


title: total RNA-seq from GM19314 (ENCLB652JOR)

description:
https://www.encodeproject.org/experiments/ENCSR717BWR/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR717BWR
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB652JOR
nucleic acid starting quantity: 52
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM19314 cell line

value: GM19314 LCLs; Donor from the Luhya in Webuye, Kenya (LWK)

value: Coriell

value: ENCBS436YAZ at ENCODE; https://www.encodeproject.org/ENCBS436YAZ/


title: V243-CGND-HRA-02230-B

description: Library name: V243-CGND-HRA-02230-B


title: total RNA-seq from HG03473 (ENCLB969VLR)

description:
https://www.encodeproject.org/experiments/ENCSR714QUV/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR714QUV
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB969VLR
nucleic acid starting quantity: 33
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG03473 cell line

value: cell line

value: HG03473 LCLs; Donor from the Mende in Sierra Leone (MSL)

value: ENCBS048VDR at ENCODE; https://www.encodeproject.org/ENCBS048VDR/


title: total RNA-seq from GM18504 (ENCLB701NEW)

description:
https://www.encodeproject.org/experiments/ENCSR714BPF/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR714BPF
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB701NEW
nucleic acid starting quantity: 46
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM18504 cell line

value: GM18504 LCLs; Donor from the Yoruba in Ibadan, Nigeria (YRI)

value: male

value: ENCBS896NCL at ENCODE; https://www.encodeproject.org/ENCBS896NCL/


title: V243-CGND-HRA-02230-A

description: Library name: V243-CGND-HRA-02230-A


title: V242-CGND-HRA-02230-B

description: Library name: V242-CGND-HRA-02230-B


title: total RNA-seq from GM18881 (ENCLB454AMI)

description:
https://www.encodeproject.org/experiments/ENCSR713NKF/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR713NKF
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB454AMI
nucleic acid starting quantity: 27
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM18881 cell line

value: GM18881 LCLs; Donor from the Yoruba in Ibadan, Nigeria (YRI)

value: female

value: ENCBS964HTG at ENCODE; https://www.encodeproject.org/ENCBS964HTG/


title: V242-CGND-HRA-02230-A

description: Library name: V242-CGND-HRA-02230-A

value: ALS

value: M


title: V241-CGND-HRA-01661-B

description: Library name: V241-CGND-HRA-01661-B

value: ALS-FTD


title: total RNA-seq from HG02981 (ENCLB820RFK)

description:
https://www.encodeproject.org/experiments/ENCSR707SQE/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR707SQE
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB820RFK
nucleic acid starting quantity: 39
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG02981 cell line

value: HG02981 LCLs; Donor from the Esan in Nigeria (ESN)

value: adult

value: unknown

value: Stephen Montgomery, Stanford

value: ENCBS155HKX at ENCODE; https://www.encodeproject.org/ENCBS155HKX/

value: Derived from ENCODE donor ENCDO908EMH; https://www.encodeproject.org/ENCDO908EMH/


title: V241-CGND-HRA-01661-A

description: Library name: V241-CGND-HRA-01661-A


title: V240-CGND-HRA-01661-B

description: Library name: V240-CGND-HRA-01661-B


title: total RNA-seq from GM21786 (ENCLB415ZPI)

description:
https://www.encodeproject.org/experiments/ENCSR706CRD/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR706CRD
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB415ZPI
nucleic acid starting quantity: 20
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21786 cell line

value: cell line

value: GM21786 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: Coriell

value: ENCBS561VVI at ENCODE; https://www.encodeproject.org/ENCBS561VVI/

value: Derived from ENCODE donor ENCDO720TCG; https://www.encodeproject.org/ENCDO720TCG/


title: total RNA-seq from GM18874 (ENCLB376SZO)

description:
https://www.encodeproject.org/experiments/ENCSR705UHV/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR705UHV
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB376SZO
nucleic acid starting quantity: 28
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM18874 cell line

value: GM18874 LCLs; Donor from the Yoruba in Ibadan, Nigeria (YRI)

value: male

value: ENCBS336BFR at ENCODE; https://www.encodeproject.org/ENCBS336BFR/


title: V239-CGND-HRA-02454-D

description: Library name: V239-CGND-HRA-02454-D

value: F


title: total RNA-seq from GM19466 (ENCLB931QJJ)

description:
https://www.encodeproject.org/experiments/ENCSR705FZP/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR705FZP
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB931QJJ
nucleic acid starting quantity: 24
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM19466 cell line

value: GM19466 LCLs; Donor from the Luhya in Webuye, Kenya (LWK)

value: ENCBS819ZCG at ENCODE; https://www.encodeproject.org/ENCBS819ZCG/


title: V239-CGND-HRA-02454-C

description: Library name: V239-CGND-HRA-02454-C

value: ALS-FTD


title: total RNA-seq from HG02805 (ENCLB204AXZ)

description:
https://www.encodeproject.org/experiments/ENCSR703LWN/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR703LWN
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB204AXZ
nucleic acid starting quantity: 39
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG02805 cell line

value: HG02805 LCLs; Donor from the Gambian in Western Divisions in the Gambia (GWD)

value: female

value: adult

value: ENCBS050VMZ at ENCODE; https://www.encodeproject.org/ENCBS050VMZ/


title: V238-CGND-HRA-02454-D

description: Library name: V238-CGND-HRA-02454-D


title: total RNA-seq from GM19383 (ENCLB824HRN)

description:
https://www.encodeproject.org/experiments/ENCSR699ZYI/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR699ZYI
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB824HRN
nucleic acid starting quantity: 32
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM19383 cell line

value: GM19383 LCLs; Donor from the Luhya in Webuye, Kenya (LWK)

value: Stephen Montgomery, Stanford

value: ENCBS640NIN at ENCODE; https://www.encodeproject.org/ENCBS640NIN/


title: V238-CGND-HRA-02454-C

description: Library name: V238-CGND-HRA-02454-C


title: V233-CGND-HRC-00023-D

description: Library name: V233-CGND-HRC-00023-D

value: Non-neurological control

value: M


title: total RNA-seq from HG02585 (ENCLB273ADN)

description:
https://www.encodeproject.org/experiments/ENCSR699NMP/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR699NMP
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB273ADN
nucleic acid starting quantity: 32
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG02585 cell line

value: cell line

value: HG02585 LCLs; Donor from the Gambian in Western Divisions in the Gambia (GWD)

value: Coriell

value: ENCBS115CEM at ENCODE; https://www.encodeproject.org/ENCBS115CEM/


title: V233-CGND-HRC-00023-C

description: Library name: V233-CGND-HRC-00023-C


title: V233-CGND-HRC-00022-B

description: Library name: V233-CGND-HRC-00022-B


title: total RNA-seq from CD14-positive monocyte (ENCLB289VHH)

description:
https://www.encodeproject.org/experiments/ENCSR698REG/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR698REG
assay title: total RNA-seq
assembly: GRCh38
encode release date: 2026-01-26
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB289VHH

source_name: Homo sapiens male adult (21 years) CD14-positive monocyte primary cell

value: CD14-positive monocyte

value: primary cell

value: male

value: 21 year

value: John Stamatoyannopoulos, UW

value: Shelly Heimfeld

value: ENCBS929NXR at ENCODE; https://www.encodeproject.org/ENCBS929NXR/


title: V233-CGND-HRC-00022-A

description: Library name: V233-CGND-HRC-00022-A


title: total RNA-seq from GM19473 (ENCLB195DJQ)

description:
https://www.encodeproject.org/experiments/ENCSR697ZMH/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR697ZMH
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB195DJQ
nucleic acid starting quantity: 43
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM19473 cell line

value: GM19473 LCLs; Donor from the Luhya in Webuye, Kenya (LWK)

value: female

value: adult

value: ENCBS290BNU at ENCODE; https://www.encodeproject.org/ENCBS290BNU/


title: V230-CGND-HRC-00025-D

description: Library name: V230-CGND-HRC-00025-D

value: Non-neurological control

value: F


title: total RNA-seq from HG03209 (ENCLB822QSM)

description:
https://www.encodeproject.org/experiments/ENCSR691PGY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR691PGY
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB822QSM
nucleic acid starting quantity: 1
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG03209 cell line

value: cell line

value: HG03209 LCLs; Donor from the Mende in Sierra Leone (MSL)

value: Stephen Montgomery, Stanford

value: ENCBS995YAT at ENCODE; https://www.encodeproject.org/ENCBS995YAT/


title: V230-CGND-HRC-00025-C

description: Library name: V230-CGND-HRC-00025-C


title: total RNA-seq from GM21613 (ENCLB300TIW)

description:
https://www.encodeproject.org/experiments/ENCSR691LPK/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR691LPK
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB300TIW
nucleic acid starting quantity: 28
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21613 cell line

value: GM21613 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: Coriell

value: ENCBS677BTS at ENCODE; https://www.encodeproject.org/ENCBS677BTS/


title: V229-CGND-HRC-00025-D

description: Library name: V229-CGND-HRC-00025-D


title: total RNA-seq from GM21742 (ENCLB396LLY)

description:
https://www.encodeproject.org/experiments/ENCSR691EYW/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR691EYW
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB396LLY
nucleic acid starting quantity: 27
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21742 cell line

value: GM21742 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: male

value: ENCBS595KKW at ENCODE; https://www.encodeproject.org/ENCBS595KKW/


title: V229-CGND-HRC-00025-C

description: Library name: V229-CGND-HRC-00025-C


title: total RNA-seq from GM19017 (ENCLB682ZZI)

description:
https://www.encodeproject.org/experiments/ENCSR689XHD/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR689XHD
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB682ZZI
nucleic acid starting quantity: 36
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM19017 cell line

value: GM19017 LCLs; Donor from the Luhya in Webuye, Kenya (LWK)

value: ENCBS412VCZ at ENCODE; https://www.encodeproject.org/ENCBS412VCZ/


title: V226-CGND-HRC-00023-D

description: Library name: V226-CGND-HRC-00023-D

value: M


title: total RNA-seq from GM19428 (ENCLB059NKG)

description:
https://www.encodeproject.org/experiments/ENCSR689WRU/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR689WRU
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB059NKG
nucleic acid starting quantity: 27
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM19428 cell line

value: GM19428 LCLs; Donor from the Luhya in Webuye, Kenya (LWK)

value: adult

value: ENCBS424GKN at ENCODE; https://www.encodeproject.org/ENCBS424GKN/


title: V226-CGND-HRC-00023-C

description: Library name: V226-CGND-HRC-00023-C

value: Non-neurological control


title: total RNA-seq from inflammatory macrophage (ENCLB442KXM)

description:
https://www.encodeproject.org/experiments/ENCSR689CVI/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR689CVI
assay title: total RNA-seq
assembly: GRCh38
encode release date: 2026-01-26
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB442KXM

source_name: Homo sapiens male adult (24 years) inflammatory macrophage primary cell

value: inflammatory macrophage

value: primary cell

value: 24 year

value: John Stamatoyannopoulos, UW

value: Shelly Heimfeld

value: ENCBS639TFZ at ENCODE; https://www.encodeproject.org/ENCBS639TFZ/


title: total RNA-seq from HG03455 (ENCLB031BRE)

description:
https://www.encodeproject.org/experiments/ENCSR687YKX/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR687YKX
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB031BRE
nucleic acid starting quantity: 33
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG03455 cell line

value: cell line

value: HG03455 LCLs; Donor from the Mende in Sierra Leone (MSL)

value: female

value: Stephen Montgomery, Stanford

value: Coriell

value: ENCBS703ILU at ENCODE; https://www.encodeproject.org/ENCBS703ILU/


title: V226-CGND-HRC-00022-A

description: Library name: V226-CGND-HRC-00022-A

value: M


title: total RNA-seq from GM19462 (ENCLB026IHQ)

description:
https://www.encodeproject.org/experiments/ENCSR685VLL/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR685VLL
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB026IHQ
nucleic acid starting quantity: 29
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM19462 cell line

value: GM19462 LCLs; Donor from the Luhya in Webuye, Kenya (LWK)

value: ENCBS261GQT at ENCODE; https://www.encodeproject.org/ENCBS261GQT/


title: V225-CGND-HRC-00023-D

description: Library name: V225-CGND-HRC-00023-D


title: V225-CGND-HRC-00023-C

description: Library name: V225-CGND-HRC-00023-C


title: total RNA-seq from HG03259 (ENCLB535GYK)

description:
https://www.encodeproject.org/experiments/ENCSR684FTN/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR684FTN
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB535GYK
nucleic acid starting quantity: 37
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG03259 cell line

value: HG03259 LCLs; Donor from the Gambian in Western Divisions in the Gambia (GWD)

value: adult

value: ENCBS168JCT at ENCODE; https://www.encodeproject.org/ENCBS168JCT/


title: V225-CGND-HRC-00022-B

description: Library name: V225-CGND-HRC-00022-B

value: Non-neurological control


title: total RNA-seq from GM19393 (ENCLB152LAZ)

description:
https://www.encodeproject.org/experiments/ENCSR679JYP/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR679JYP
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB152LAZ
nucleic acid starting quantity: 32
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM19393 cell line

value: GM19393 LCLs; Donor from the Luhya in Webuye, Kenya (LWK)

value: male

value: ENCBS704QAP at ENCODE; https://www.encodeproject.org/ENCBS704QAP/


title: V181-CGND-HRA-02525-2-B

description: Library name: V181-CGND-HRA-02525-2-B

value: ALS

value: F


title: total RNA-seq from GM18868 (ENCLB817XHR)

description:
https://www.encodeproject.org/experiments/ENCSR676MJV/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR676MJV
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB817XHR
nucleic acid starting quantity: 32
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM18868 cell line

value: cell line

value: GM18868 LCLs; Donor from the Yoruba in Ibadan, Nigeria (YRI)

value: unknown

value: ENCBS303XQZ at ENCODE; https://www.encodeproject.org/ENCBS303XQZ/

value: Derived from ENCODE donor ENCDO847POS; https://www.encodeproject.org/ENCDO847POS/


title: V181-CGND-HRA-02525-2-A

description: Library name: V181-CGND-HRA-02525-2-A


title: total RNA-seq from GM21320 (ENCLB194RFW)

description:
https://www.encodeproject.org/experiments/ENCSR671CAO/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR671CAO
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB194RFW
nucleic acid starting quantity: 21
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21320 cell line

value: GM21320 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: female

value: Stephen Montgomery, Stanford

value: Coriell

value: ENCBS063XEI at ENCODE; https://www.encodeproject.org/ENCBS063XEI/


title: V180-CGND-HRA-02525-2-B

description: Library name: V180-CGND-HRA-02525-2-B


title: total RNA-seq from HG03479 (ENCLB219MES)

description:
https://www.encodeproject.org/experiments/ENCSR670PDC/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR670PDC
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB219MES
nucleic acid starting quantity: 20
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG03479 cell line

value: HG03479 LCLs; Donor from the Mende in Sierra Leone (MSL)

value: adult

value: ENCBS542YGD at ENCODE; https://www.encodeproject.org/ENCBS542YGD/


title: V226-CGND-HRC-00022-B

description: Library name: V226-CGND-HRC-00022-B

value: Non-neurological control

value: M


title: total RNA-seq from HG03397 (ENCLB848RYD)

description:
https://www.encodeproject.org/experiments/ENCSR687FSO/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR687FSO
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB848RYD
nucleic acid starting quantity: 27
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG03397 cell line

value: HG03397 LCLs; Donor from the Mende in Sierra Leone (MSL)

value: male

value: ENCBS309OCD at ENCODE; https://www.encodeproject.org/ENCBS309OCD/


title: V180-CGND-HRA-02525-2-A

description: Library name: V180-CGND-HRA-02525-2-A

value: ALS

value: F


title: total RNA-seq from GM21619 (ENCLB436UEN)

description:
https://www.encodeproject.org/experiments/ENCSR669ZCF/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR669ZCF
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB436UEN
nucleic acid starting quantity: 21
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21619 cell line

value: cell line

value: GM21619 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: unknown

value: ENCBS062HXL at ENCODE; https://www.encodeproject.org/ENCBS062HXL/

value: Derived from ENCODE donor ENCDO236ISC; https://www.encodeproject.org/ENCDO236ISC/


title: V179-CGND-HRA-02521-2-D

description: Library name: V179-CGND-HRA-02521-2-D


title: total RNA-seq from GM21683 (ENCLB781JBX)

description:
https://www.encodeproject.org/experiments/ENCSR669PMY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR669PMY
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB781JBX
nucleic acid starting quantity: 32
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21683 cell line

value: GM21683 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: female

value: Stephen Montgomery, Stanford

value: Coriell

value: ENCBS133FQR at ENCODE; https://www.encodeproject.org/ENCBS133FQR/


title: V179-CGND-HRA-02521-2-C

description: Library name: V179-CGND-HRA-02521-2-C


title: total RNA-seq from GM21526 (ENCLB938GYF)

description:
https://www.encodeproject.org/experiments/ENCSR667JGU/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR667JGU
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB938GYF
nucleic acid starting quantity: 34
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21526 cell line

value: GM21526 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: adult

value: ENCBS904JUM at ENCODE; https://www.encodeproject.org/ENCBS904JUM/

value: Derived from ENCODE donor ENCDO825NZI; https://www.encodeproject.org/ENCDO825NZI/


title: V178-CGND-HRA-02521-2-D

description: Library name: V178-CGND-HRA-02521-2-D

value: M


title: V248-CGND-HRA-02511-C

description: Library name: V248-CGND-HRA-02511-C

value: ALS Spectrum MND, Other Neurological Disorders


title: V248-CGND-HRA-02511-D

description: Library name: V248-CGND-HRA-02511-D


title: V225-CGND-HRC-00022-A

description: Library name: V225-CGND-HRC-00022-A

value: Non-neurological control


title: V248-CGND-HRA-02171-B

description: Library name: V248-CGND-HRA-02171-B

value: ALS

value: F


title: total RNA-seq from GM18870 (ENCLB668LEP)

description:
https://www.encodeproject.org/experiments/ENCSR677VZY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR677VZY
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB668LEP
nucleic acid starting quantity: 29
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM18870 cell line

value: cell line

value: GM18870 LCLs; Donor from the Yoruba in Ibadan, Nigeria (YRI)

value: unknown

value: ENCBS770RCF at ENCODE; https://www.encodeproject.org/ENCBS770RCF/

value: Derived from ENCODE donor ENCDO207EAQ; https://www.encodeproject.org/ENCDO207EAQ/


title: total RNA-seq from HG03159 (ENCLB815UOH)

description:
https://www.encodeproject.org/experiments/ENCSR748JHQ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR748JHQ
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB815UOH
nucleic acid starting quantity: 33
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG03159 cell line

value: HG03159 LCLs; Donor from the Esan in Nigeria (ESN)

value: female

value: Stephen Montgomery, Stanford

value: ENCBS182BOZ at ENCODE; https://www.encodeproject.org/ENCBS182BOZ/

value: Derived from ENCODE donor ENCDO740WGW; https://www.encodeproject.org/ENCDO740WGW/


title: total RNA-seq from GM21647 (ENCLB043KKB)

description:
https://www.encodeproject.org/experiments/ENCSR665XVN/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR665XVN
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB043KKB
nucleic acid starting quantity: 19
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21647 cell line

value: GM21647 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: male

value: adult

value: Coriell

value: ENCBS034AYN at ENCODE; https://www.encodeproject.org/ENCBS034AYN/


title: V178-CGND-HRA-02521-2-C

description: Library name: V178-CGND-HRA-02521-2-C

value: ALS

value: M


title: V245-CGND-HRA-03040-B

description: Library name: V245-CGND-HRA-03040-B

value: F


title: total RNA-seq from GM21732 (ENCLB892LOD)

description:
https://www.encodeproject.org/experiments/ENCSR664DTO/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR664DTO
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB892LOD
nucleic acid starting quantity: 5
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21732 cell line

value: cell line

value: GM21732 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: ENCBS366QNZ at ENCODE; https://www.encodeproject.org/ENCBS366QNZ/


title: V177-CGND-HRA-03135-B

description: Library name: V177-CGND-HRA-03135-B


title: total RNA-seq from GM19474 (ENCLB066TTY)

description:
https://www.encodeproject.org/experiments/ENCSR662FDP/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR662FDP
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB066TTY
nucleic acid starting quantity: 42
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM19474 cell line

value: GM19474 LCLs; Donor from the Luhya in Webuye, Kenya (LWK)

value: ENCBS619OAS at ENCODE; https://www.encodeproject.org/ENCBS619OAS/


title: V177-CGND-HRA-03135-A

description: Library name: V177-CGND-HRA-03135-A


title: V177-CGND-HRA-03109-D

description: Library name: V177-CGND-HRA-03109-D


title: total RNA-seq from GM19429 (ENCLB903OOP)

description:
https://www.encodeproject.org/experiments/ENCSR661DLG/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR661DLG
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB903OOP
nucleic acid starting quantity: 34
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM19429 cell line

value: GM19429 LCLs; Donor from the Luhya in Webuye, Kenya (LWK)

value: ENCBS723EMY at ENCODE; https://www.encodeproject.org/ENCBS723EMY/


title: total RNA-seq from GM21424 (ENCLB075BHZ)

description:
https://www.encodeproject.org/experiments/ENCSR734PKC/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR734PKC
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB075BHZ
nucleic acid starting quantity: 38
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21424 cell line

value: GM21424 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: female

value: Stephen Montgomery, Stanford

value: ENCBS930CBV at ENCODE; https://www.encodeproject.org/ENCBS930CBV/


title: total RNA-seq from GM18501 (ENCLB228PMN)

description:
https://www.encodeproject.org/experiments/ENCSR660XUE/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR660XUE
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB228PMN
nucleic acid starting quantity: 41
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM18501 cell line

value: GM18501 LCLs; Donor from the Yoruba in Ibadan, Nigeria (YRI)

value: male

value: adult

value: ENCBS072HHX at ENCODE; https://www.encodeproject.org/ENCBS072HHX/


title: V177-CGND-HRA-03109-C

description: Library name: V177-CGND-HRA-03109-C

value: ALS

value: M


title: V244-CGND-HRA-03040-B

description: Library name: V244-CGND-HRA-03040-B

value: F


title: total RNA-seq from GM21295 (ENCLB380TRD)

description:
https://www.encodeproject.org/experiments/ENCSR660NVC/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR660NVC
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB380TRD
nucleic acid starting quantity: 25
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21295 cell line

value: cell line

value: GM21295 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: Coriell

value: ENCBS999LUG at ENCODE; https://www.encodeproject.org/ENCBS999LUG/


title: V243-CGND-HRA-02472-D

description: Library name: V243-CGND-HRA-02472-D


title: V176-CGND-HRA-03135-B

description: Library name: V176-CGND-HRA-03135-B


title: total RNA-seq from inflammatory macrophage (ENCLB842ZDP)

description:
https://www.encodeproject.org/experiments/ENCSR660JYJ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR660JYJ
assay title: total RNA-seq
assembly: GRCh38
encode release date: 2026-01-26
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB842ZDP

source_name: Homo sapiens male adult (40 years) inflammatory macrophage primary cell

value: inflammatory macrophage

value: primary cell

value: 40 year

value: John Stamatoyannopoulos, UW

value: Shelly Heimfeld

value: ENCBS021VZY at ENCODE; https://www.encodeproject.org/ENCBS021VZY/


title: total RNA-seq from HG03563 (ENCLB279EVK)

description:
https://www.encodeproject.org/experiments/ENCSR658TVR/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR658TVR
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB279EVK
nucleic acid starting quantity: 28
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG03563 cell line

value: HG03563 LCLs; Donor from the Mende in Sierra Leone (MSL)

value: female

value: Stephen Montgomery, Stanford

value: ENCBS394ZWM at ENCODE; https://www.encodeproject.org/ENCBS394ZWM/


title: V176-CGND-HRA-03135-A

description: Library name: V176-CGND-HRA-03135-A

value: ALS


title: V176-CGND-HRA-03109-D

description: Library name: V176-CGND-HRA-03109-D

value: M


title: total RNA-seq from GM21447 (ENCLB776IIM)

description:
https://www.encodeproject.org/experiments/ENCSR655WZX/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR655WZX
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB776IIM
nucleic acid starting quantity: 41
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21447 cell line

value: GM21447 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: male

value: adult

value: unknown

value: ENCBS959QIZ at ENCODE; https://www.encodeproject.org/ENCBS959QIZ/

value: Derived from ENCODE donor ENCDO735LIL; https://www.encodeproject.org/ENCDO735LIL/


title: total RNA-seq from HG03028 (ENCLB547TWS)

description:
https://www.encodeproject.org/experiments/ENCSR652AOQ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR652AOQ
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB547TWS
nucleic acid starting quantity: 39
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG03028 cell line

value: cell line

value: HG03028 LCLs; Donor from the Gambian in Western Divisions in the Gambia (GWD)

value: Coriell

value: ENCBS240NXN at ENCODE; https://www.encodeproject.org/ENCBS240NXN/


title: V165-CGND-HRA-01377-C

description: Library name: V165-CGND-HRA-01377-C


title: total RNA-seq from HG03439 (ENCLB677LYY)

description:
https://www.encodeproject.org/experiments/ENCSR654AWV/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR654AWV
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB677LYY
nucleic acid starting quantity: 26
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG03439 cell line

value: HG03439 LCLs; Donor from the Mende in Sierra Leone (MSL)

value: ENCBS038JHN at ENCODE; https://www.encodeproject.org/ENCBS038JHN/

value: Derived from ENCODE donor ENCDO636RFX; https://www.encodeproject.org/ENCDO636RFX/


title: V165-CGND-HRA-01377-D

description: Library name: V165-CGND-HRA-01377-D


title: V176-CGND-HRA-03109-C

description: Library name: V176-CGND-HRA-03109-C


title: total RNA-seq from HG03385 (ENCLB111OEG)

description:
https://www.encodeproject.org/experiments/ENCSR650KFI/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR650KFI
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB111OEG
nucleic acid starting quantity: 28
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG03385 cell line

value: HG03385 LCLs; Donor from the Mende in Sierra Leone (MSL)

value: Stephen Montgomery, Stanford

value: ENCBS524LSD at ENCODE; https://www.encodeproject.org/ENCBS524LSD/


title: total RNA-seq from GM19238 (ENCLB895HJJ)

description:
https://www.encodeproject.org/experiments/ENCSR650NFP/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR650NFP
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB895HJJ
nucleic acid starting quantity: 32
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM19238 cell line

value: GM19238 LCLs; Donor from the Yoruba in Ibadan, Nigeria (YRI)

value: female

value: ENCBS341UIW at ENCODE; https://www.encodeproject.org/ENCBS341UIW/


title: V164-CGND-HRA-01377-D

description: Library name: V164-CGND-HRA-01377-D

value: ALS

value: M


title: V164-CGND-HRA-01377-C

description: Library name: V164-CGND-HRA-01377-C


title: V161-CGND-HRA-02636-D

description: Library name: V161-CGND-HRA-02636-D

value: Non-neurological control


title: total RNA-seq from HG02885 (ENCLB991KVX)

description:
https://www.encodeproject.org/experiments/ENCSR649ABR/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR649ABR
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB991KVX
nucleic acid starting quantity: 35
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG02885 cell line

value: HG02885 LCLs; Donor from the Gambian in Western Divisions in the Gambia (GWD)

value: adult

value: unknown

value: ENCBS167GJW at ENCODE; https://www.encodeproject.org/ENCBS167GJW/

value: Derived from ENCODE donor ENCDO772WHN; https://www.encodeproject.org/ENCDO772WHN/


title: total RNA-seq from HG03433 (ENCLB394RDK)

description:
https://www.encodeproject.org/experiments/ENCSR644XIP/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR644XIP
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB394RDK
nucleic acid starting quantity: 10
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG03433 cell line

value: cell line

value: HG03433 LCLs; Donor from the Mende in Sierra Leone (MSL)

value: male

value: Coriell

value: ENCBS296RRG at ENCODE; https://www.encodeproject.org/ENCBS296RRG/


title: V161-CGND-HRA-02636-C

description: Library name: V161-CGND-HRA-02636-C


title: V161-CGND-HRA-01383-A

description: Library name: V161-CGND-HRA-01383-A


title: total RNA-seq from suppressor macrophage (ENCLB808RRU)

description:
https://www.encodeproject.org/experiments/ENCSR641VNR/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR641VNR
assay title: total RNA-seq
assembly: GRCh38
encode release date: 2026-01-26
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB808RRU

source_name: Homo sapiens male adult (24 years) suppressor macrophage primary cell

value: suppressor macrophage

value: primary cell

value: 24 year

value: John Stamatoyannopoulos, UW

value: Shelly Heimfeld

value: ENCBS823VSL at ENCODE; https://www.encodeproject.org/ENCBS823VSL/


title: total RNA-seq from HG02938 (ENCLB273TSV)

description:
https://www.encodeproject.org/experiments/ENCSR642VUY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR642VUY
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB273TSV
nucleic acid starting quantity: 34
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG02938 cell line

value: HG02938 LCLs; Donor from the Esan in Nigeria (ESN)

value: Stephen Montgomery, Stanford

value: ENCBS479ZVD at ENCODE; https://www.encodeproject.org/ENCBS479ZVD/

value: Derived from ENCODE donor ENCDO839KPP; https://www.encodeproject.org/ENCDO839KPP/


title: V160-CGND-HRA-02636-D

description: Library name: V160-CGND-HRA-02636-D

value: Non-neurological control

value: M


title: V160-CGND-HRA-02636-C

description: Library name: V160-CGND-HRA-02636-C


title: total RNA-seq from GM21399 (ENCLB315ALW)

description:
https://www.encodeproject.org/experiments/ENCSR638ASI/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR638ASI
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB315ALW
nucleic acid starting quantity: 33
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21399 cell line

value: cell line

value: GM21399 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: adult

value: ENCBS892WSE at ENCODE; https://www.encodeproject.org/ENCBS892WSE/


title: V160-CGND-HRA-01383-B

description: Library name: V160-CGND-HRA-01383-B


title: total RNA-seq from GM21574 (ENCLB397EJW)

description:
https://www.encodeproject.org/experiments/ENCSR635HYR/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR635HYR
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB397EJW
nucleic acid starting quantity: 27
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21574 cell line

value: GM21574 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: female

value: Coriell

value: ENCBS793FDZ at ENCODE; https://www.encodeproject.org/ENCBS793FDZ/


title: V155-CGND-HRA-02633-C

description: Library name: V155-CGND-HRA-02633-C


title: total RNA-seq from suppressor macrophage (ENCLB034UEK)

description:
https://www.encodeproject.org/experiments/ENCSR633DOW/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR633DOW
assay title: total RNA-seq
assembly: GRCh38
encode release date: 2026-01-26
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB034UEK

value: suppressor macrophage

value: primary cell

value: male

value: 24 year

value: John Stamatoyannopoulos, UW

value: ENCBS747QNX at ENCODE; https://www.encodeproject.org/ENCBS747QNX/


title: total RNA-seq from HG02861 (ENCLB509VUJ)

description:
https://www.encodeproject.org/experiments/ENCSR629ODY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR629ODY
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB509VUJ
nucleic acid starting quantity: 31
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG02861 cell line

value: HG02861 LCLs; Donor from the Gambian in Western Divisions in the Gambia (GWD)

value: Stephen Montgomery, Stanford

value: ENCBS699IZV at ENCODE; https://www.encodeproject.org/ENCBS699IZV/


title: V154-CGND-HRA-02633-D

description: Library name: V154-CGND-HRA-02633-D

value: Non-neurological control

value: M


title: V154-CGND-HRA-02633-C

description: Library name: V154-CGND-HRA-02633-C


title: total RNA-seq from HG03461 (ENCLB069PJV)

description:
https://www.encodeproject.org/experiments/ENCSR628GXS/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR628GXS
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB069PJV
nucleic acid starting quantity: 29
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG03461 cell line

value: cell line

value: HG03461 LCLs; Donor from the Mende in Sierra Leone (MSL)

value: adult

value: ENCBS406SWL at ENCODE; https://www.encodeproject.org/ENCBS406SWL/


title: V154-CGND-HRA-01381-B

description: Library name: V154-CGND-HRA-01381-B


title: V154-CGND-HRA-01381-A

description: Library name: V154-CGND-HRA-01381-A


title: total RNA-seq from GM21333 (ENCLB140RNO)

description:
https://www.encodeproject.org/experiments/ENCSR623JKQ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR623JKQ
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB140RNO
nucleic acid starting quantity: 30
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21333 cell line

value: GM21333 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: female

value: Coriell

value: ENCBS395DIJ at ENCODE; https://www.encodeproject.org/ENCBS395DIJ/


title: total RNA-seq from GM18488 (ENCLB817BNX)

description:
https://www.encodeproject.org/experiments/ENCSR623ENT/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR623ENT
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB817BNX
nucleic acid starting quantity: 39
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM18488 cell line

value: GM18488 LCLs; Donor from the Yoruba in Ibadan, Nigeria (YRI)

value: ENCBS187HRP at ENCODE; https://www.encodeproject.org/ENCBS187HRP/


title: total RNA-seq from HG02814 (ENCLB613WGC)

description:
https://www.encodeproject.org/experiments/ENCSR623CFL/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR623CFL
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB613WGC
nucleic acid starting quantity: 33
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG02814 cell line

value: HG02814 LCLs; Donor from the Gambian in Western Divisions in the Gambia (GWD)

value: ENCBS367PNN at ENCODE; https://www.encodeproject.org/ENCBS367PNN/


title: V141-CGND-HRA-02905-A

description: Library name: V141-CGND-HRA-02905-A

value: ALS

value: F


title: total RNA-seq from GM19041 (ENCLB036EIR)

description:
https://www.encodeproject.org/experiments/ENCSR622YIA/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR622YIA
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB036EIR
nucleic acid starting quantity: 32
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM19041 cell line

value: GM19041 LCLs; Donor from the Luhya in Webuye, Kenya (LWK)

value: male

value: Stephen Montgomery, Stanford

value: ENCBS130YKL at ENCODE; https://www.encodeproject.org/ENCBS130YKL/


title: total RNA-seq from HG03103 (ENCLB363TBE)

description:
https://www.encodeproject.org/experiments/ENCSR621PQS/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR621PQS
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB363TBE
nucleic acid starting quantity: 28
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG03103 cell line

value: cell line

value: HG03103 LCLs; Donor from the Esan in Nigeria (ESN)

value: unknown

value: ENCBS113YHR at ENCODE; https://www.encodeproject.org/ENCBS113YHR/

value: Derived from ENCODE donor ENCDO843HEK; https://www.encodeproject.org/ENCDO843HEK/


title: total RNA-seq from GM19355 (ENCLB222OGA)

description:
https://www.encodeproject.org/experiments/ENCSR619NZQ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR619NZQ
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB222OGA
nucleic acid starting quantity: 22
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM19355 cell line

value: GM19355 LCLs; Donor from the Luhya in Webuye, Kenya (LWK)

value: female

value: adult

value: Coriell

value: ENCBS900ARR at ENCODE; https://www.encodeproject.org/ENCBS900ARR/


title: V141-CGND-HRA-02402-C

description: Library name: V141-CGND-HRA-02402-C

value: M


title: V140-CGND-HRA-02905-B

description: Library name: V140-CGND-HRA-02905-B

value: ALS


title: V140-CGND-HRA-02905-A

description: Library name: V140-CGND-HRA-02905-A

value: F


title: total RNA-seq from GM21587 (ENCLB226CWU)

description:
https://www.encodeproject.org/experiments/ENCSR615WDX/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR615WDX
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB226CWU
nucleic acid starting quantity: 21
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21587 cell line

value: GM21587 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: ENCBS351NRC at ENCODE; https://www.encodeproject.org/ENCBS351NRC/


title: total RNA-seq from GM21355 (ENCLB046SUG)

description:
https://www.encodeproject.org/experiments/ENCSR614BQR/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR614BQR
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB046SUG
nucleic acid starting quantity: 28
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21355 cell line

value: GM21355 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: male

value: Stephen Montgomery, Stanford

value: ENCBS331LLS at ENCODE; https://www.encodeproject.org/ENCBS331LLS/


title: V140-CGND-HRA-02402-D

description: Library name: V140-CGND-HRA-02402-D


title: total RNA-seq from GM21782 (ENCLB812SBJ)

description:
https://www.encodeproject.org/experiments/ENCSR613SZQ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR613SZQ
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB812SBJ
nucleic acid starting quantity: 29
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21782 cell line

value: cell line

value: GM21782 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: ENCBS929COL at ENCODE; https://www.encodeproject.org/ENCBS929COL/


title: V139-CGND-HRA-02907-B

description: Library name: V139-CGND-HRA-02907-B


title: V139-CGND-HRA-02907-A

description: Library name: V139-CGND-HRA-02907-A


title: total RNA-seq from HG03166 (ENCLB788BFA)

description:
https://www.encodeproject.org/experiments/ENCSR610MWX/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR610MWX
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB788BFA
nucleic acid starting quantity: 41
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG03166 cell line

value: HG03166 LCLs; Donor from the Esan in Nigeria (ESN)

value: ENCBS712RRD at ENCODE; https://www.encodeproject.org/ENCBS712RRD/


title: V138-CGND-HRA-02907-B

description: Library name: V138-CGND-HRA-02907-B


title: V138-CGND-HRA-02907-A

description: Library name: V138-CGND-HRA-02907-A


title: total RNA-seq from GM21306 (ENCLB885GIG)

description:
https://www.encodeproject.org/experiments/ENCSR608WYC/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR608WYC
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB885GIG
nucleic acid starting quantity: 25
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21306 cell line

value: GM21306 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: female

value: adult

value: ENCBS826XVQ at ENCODE; https://www.encodeproject.org/ENCBS826XVQ/


title: V137-CGND-HRA-02466-D

description: Library name: V137-CGND-HRA-02466-D

value: ALS

value: M


title: total RNA-seq from GM21583 (ENCLB086BIA)

description:
https://www.encodeproject.org/experiments/ENCSR612PZD/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR612PZD
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB086BIA
nucleic acid starting quantity: 19
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21583 cell line

value: GM21583 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: Coriell

value: ENCBS952JOV at ENCODE; https://www.encodeproject.org/ENCBS952JOV/


title: total RNA-seq from HG03311 (ENCLB468YRP)

description:
https://www.encodeproject.org/experiments/ENCSR608DIJ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR608DIJ
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB468YRP
nucleic acid starting quantity: 23
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG03311 cell line

value: HG03311 LCLs; Donor from the Esan in Nigeria (ESN)

value: male

value: ENCBS195NMR at ENCODE; https://www.encodeproject.org/ENCBS195NMR/


title: V137-CGND-HRA-02466-C

description: Library name: V137-CGND-HRA-02466-C


title: total RNA-seq from HG03567 (ENCLB052QME)

description:
https://www.encodeproject.org/experiments/ENCSR605OJJ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR605OJJ
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB052QME
nucleic acid starting quantity: 26
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG03567 cell line

value: cell line

value: HG03567 LCLs; Donor from the Mende in Sierra Leone (MSL)

value: Stephen Montgomery, Stanford

value: ENCBS185AKD at ENCODE; https://www.encodeproject.org/ENCBS185AKD/


title: total RNA-seq from HG03115 (ENCLB604BRF)

description:
https://www.encodeproject.org/experiments/ENCSR649IOK/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR649IOK
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB604BRF
nucleic acid starting quantity: 41
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG03115 cell line

value: HG03115 LCLs; Donor from the Esan in Nigeria (ESN)

value: ENCBS049QCB at ENCODE; https://www.encodeproject.org/ENCBS049QCB/


title: total RNA-seq from HG02676 (ENCLB721TNB)

description:
https://www.encodeproject.org/experiments/ENCSR609WDD/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR609WDD
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB721TNB
nucleic acid starting quantity: 43
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG02676 cell line

value: HG02676 LCLs; Donor from the Gambian in Western Divisions in the Gambia (GWD)

value: female

value: ENCBS813YGW at ENCODE; https://www.encodeproject.org/ENCBS813YGW/


title: V137-CGND-HRA-02460-B

description: Library name: V137-CGND-HRA-02460-B

value: ALS


title: total RNA-seq from HG02759 (ENCLB563YHC)

description:
https://www.encodeproject.org/experiments/ENCSR605FKR/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR605FKR
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB563YHC
nucleic acid starting quantity: 28
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG02759 cell line

value: HG02759 LCLs; Donor from the Gambian in Western Divisions in the Gambia (GWD)

value: adult

value: unknown

value: ENCBS103BCS at ENCODE; https://www.encodeproject.org/ENCBS103BCS/

value: Derived from ENCODE donor ENCDO810YDX; https://www.encodeproject.org/ENCDO810YDX/


title: total RNA-seq from suppressor macrophage (ENCLB566HET)

description:
https://www.encodeproject.org/experiments/ENCSR640LYV/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR640LYV
assay title: total RNA-seq
assembly: GRCh38
encode release date: 2026-01-26
lab: John Stamatoyannopoulos, UW
library encode accession: ENCLB566HET

source_name: Homo sapiens male adult (24 years) suppressor macrophage primary cell

value: suppressor macrophage

value: primary cell

value: male

value: 24 year

value: John Stamatoyannopoulos, UW

value: Shelly Heimfeld

value: ENCBS052YSJ at ENCODE; https://www.encodeproject.org/ENCBS052YSJ/


title: V161-CGND-HRA-01383-B

description: Library name: V161-CGND-HRA-01383-B

value: Non-neurological control

value: M


title: total RNA-seq from HG02465 (ENCLB720BDG)

description:
https://www.encodeproject.org/experiments/ENCSR604JSF/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR604JSF
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB720BDG
nucleic acid starting quantity: 21
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG02465 cell line

value: cell line

value: HG02465 LCLs; Donor from the Gambian in Western Divisions in the Gambia (GWD)

value: female

value: Stephen Montgomery, Stanford

value: Coriell

value: ENCBS246XPI at ENCODE; https://www.encodeproject.org/ENCBS246XPI/


title: V137-CGND-HRA-02460-A

description: Library name: V137-CGND-HRA-02460-A

value: ALS


title: total RNA-seq from GM19317 (ENCLB399PHJ)

description:
https://www.encodeproject.org/experiments/ENCSR636IKH/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR636IKH
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB399PHJ
nucleic acid starting quantity: 18
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM19317 cell line

value: GM19317 LCLs; Donor from the Luhya in Webuye, Kenya (LWK)

value: adult

value: ENCBS356JBH at ENCODE; https://www.encodeproject.org/ENCBS356JBH/


title: V160-CGND-HRA-01383-A

description: Library name: V160-CGND-HRA-01383-A


title: V155-CGND-HRA-02633-D

description: Library name: V155-CGND-HRA-02633-D


title: V136-CGND-HRA-02466-D

description: Library name: V136-CGND-HRA-02466-D


title: V155-CGND-HRA-01381-A

description: Library name: V155-CGND-HRA-01381-A


title: V136-CGND-HRA-02466-C

description: Library name: V136-CGND-HRA-02466-C


title: total RNA-seq from HG03064 (ENCLB610WZS)

description:
https://www.encodeproject.org/experiments/ENCSR633TYQ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR633TYQ
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB610WZS
nucleic acid starting quantity: 31
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG03064 cell line

value: HG03064 LCLs; Donor from the Mende in Sierra Leone (MSL)

value: unknown

value: ENCBS035JYQ at ENCODE; https://www.encodeproject.org/ENCBS035JYQ/

value: Derived from ENCODE donor ENCDO293YOP; https://www.encodeproject.org/ENCDO293YOP/


title: total RNA-seq from HG02623 (ENCLB157WPO)

description:
https://www.encodeproject.org/experiments/ENCSR602HXV/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR602HXV
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB157WPO
nucleic acid starting quantity: 34
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG02623 cell line

value: HG02623 LCLs; Donor from the Gambian in Western Divisions in the Gambia (GWD)

value: male

value: ENCBS696BIK at ENCODE; https://www.encodeproject.org/ENCBS696BIK/

value: Derived from ENCODE donor ENCDO929LTS; https://www.encodeproject.org/ENCDO929LTS/


title: total RNA-seq from HG03300 (ENCLB135RVG)

description:
https://www.encodeproject.org/experiments/ENCSR597QGT/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR597QGT
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB135RVG
nucleic acid starting quantity: 24
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG03300 cell line

value: cell line

value: HG03300 LCLs; Donor from the Esan in Nigeria (ESN)

value: ENCBS714DVA at ENCODE; https://www.encodeproject.org/ENCBS714DVA/


title: total RNA-seq from HG03294 (ENCLB199KBD)

description:
https://www.encodeproject.org/experiments/ENCSR631LSU/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR631LSU
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB199KBD
nucleic acid starting quantity: 34
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG03294 cell line

value: HG03294 LCLs; Donor from the Esan in Nigeria (ESN)

value: female

value: Stephen Montgomery, Stanford

value: Coriell

value: ENCBS056WZU at ENCODE; https://www.encodeproject.org/ENCBS056WZU/


title: V136-CGND-HRA-02460-B

description: Library name: V136-CGND-HRA-02460-B

value: ALS

value: M


title: total RNA-seq from GM19331 (ENCLB664XOH)

description:
https://www.encodeproject.org/experiments/ENCSR594LOZ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR594LOZ
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB664XOH
nucleic acid starting quantity: 62
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM19331 cell line

value: GM19331 LCLs; Donor from the Luhya in Webuye, Kenya (LWK)

value: adult

value: ENCBS606KTN at ENCODE; https://www.encodeproject.org/ENCBS606KTN/


title: total RNA-seq from GM19446 (ENCLB789JEC)

description:
https://www.encodeproject.org/experiments/ENCSR594AQY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR594AQY
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB789JEC
nucleic acid starting quantity: 16
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM19446 cell line

value: GM19446 LCLs; Donor from the Luhya in Webuye, Kenya (LWK)

value: ENCBS602XWV at ENCODE; https://www.encodeproject.org/ENCBS602XWV/


title: V136-CGND-HRA-02460-A

description: Library name: V136-CGND-HRA-02460-A


title: total RNA-seq from HG02817 (ENCLB600EMV)

description:
https://www.encodeproject.org/experiments/ENCSR592AEV/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR592AEV
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB600EMV
nucleic acid starting quantity: 40
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG02817 cell line

value: HG02817 LCLs; Donor from the Gambian in Western Divisions in the Gambia (GWD)

value: ENCBS982INJ at ENCODE; https://www.encodeproject.org/ENCBS982INJ/


title: V133-CGND-HRA-02463-C

description: Library name: V133-CGND-HRA-02463-C


title: V133-CGND-HRA-02463-D

description: Library name: V133-CGND-HRA-02463-D


title: total RNA-seq from HG02808 (ENCLB401TTW)

description:
https://www.encodeproject.org/experiments/ENCSR588YMV/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR588YMV
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB401TTW
nucleic acid starting quantity: 24
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG02808 cell line

value: cell line

value: HG02808 LCLs; Donor from the Gambian in Western Divisions in the Gambia (GWD)

value: ENCBS139BJY at ENCODE; https://www.encodeproject.org/ENCBS139BJY/


title: V133-CGND-HRA-02457-B

description: Library name: V133-CGND-HRA-02457-B


title: V133-CGND-HRA-02457-A

description: Library name: V133-CGND-HRA-02457-A


title: total RNA-seq from HG03224 (ENCLB275NEX)

description:
https://www.encodeproject.org/experiments/ENCSR588GAR/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR588GAR
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB275NEX
nucleic acid starting quantity: 25
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG03224 cell line

value: HG03224 LCLs; Donor from the Mende in Sierra Leone (MSL)

value: male

value: ENCBS529JIX at ENCODE; https://www.encodeproject.org/ENCBS529JIX/


title: total RNA-seq from GM21489 (ENCLB453AYJ)

description:
https://www.encodeproject.org/experiments/ENCSR587FUD/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR587FUD
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB453AYJ
nucleic acid starting quantity: 31
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21489 cell line

value: GM21489 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: female

value: Stephen Montgomery, Stanford

value: Coriell

value: ENCBS722FWN at ENCODE; https://www.encodeproject.org/ENCBS722FWN/


title: V132-CGND-HRA-02463-D

description: Library name: V132-CGND-HRA-02463-D

value: ALS

value: M


title: total RNA-seq from HG03025 (ENCLB767KTR)

description:
https://www.encodeproject.org/experiments/ENCSR586WMW/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR586WMW
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB767KTR
nucleic acid starting quantity: 37
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG03025 cell line

value: HG03025 LCLs; Donor from the Gambian in Western Divisions in the Gambia (GWD)

value: adult

value: unknown

value: ENCBS171IRO at ENCODE; https://www.encodeproject.org/ENCBS171IRO/

value: Derived from ENCODE donor ENCDO065YPX; https://www.encodeproject.org/ENCDO065YPX/


title: V132-CGND-HRA-02463-C

description: Library name: V132-CGND-HRA-02463-C


title: total RNA-seq from HG02852 (ENCLB364GOF)

description:
https://www.encodeproject.org/experiments/ENCSR585APF/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR585APF
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB364GOF
nucleic acid starting quantity: 23
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG02852 cell line

value: cell line

value: HG02852 LCLs; Donor from the Gambian in Western Divisions in the Gambia (GWD)

value: ENCBS866YWY at ENCODE; https://www.encodeproject.org/ENCBS866YWY/

value: Derived from ENCODE donor ENCDO650SIC; https://www.encodeproject.org/ENCDO650SIC/


title: V141-CGND-HRA-02905-B

description: Library name: V141-CGND-HRA-02905-B

value: F


title: total RNA-seq from GM21440 (ENCLB591RHZ)

description:
https://www.encodeproject.org/experiments/ENCSR584IVB/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR584IVB
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB591RHZ
nucleic acid starting quantity: 27
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21440 cell line

value: GM21440 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: male

value: ENCBS245UQG at ENCODE; https://www.encodeproject.org/ENCBS245UQG/


title: V132-CGND-HRA-02457-A

description: Library name: V132-CGND-HRA-02457-A


title: V132-CGND-HRA-02457-B

description: Library name: V132-CGND-HRA-02457-B


title: total RNA-seq from GM21631 (ENCLB060UVA)

description:
https://www.encodeproject.org/experiments/ENCSR584DEF/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR584DEF
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB060UVA
nucleic acid starting quantity: 28
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM21631 cell line

value: GM21631 LCLs; Donor from the Maasai in Kinyawa, Kenya (MKK)

value: Stephen Montgomery, Stanford

value: Coriell

value: ENCBS503XQP at ENCODE; https://www.encodeproject.org/ENCBS503XQP/


title: V084-CGND-HRA-02960-B

description: Library name: V084-CGND-HRA-02960-B

value: ALS

value: M


title: total RNA-seq from HG02634 (ENCLB466OYQ)

description:
https://www.encodeproject.org/experiments/ENCSR581YIF/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR581YIF
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB466OYQ
nucleic acid starting quantity: 37
nucleic acid starting quantity units: µg

source_name: Homo sapiens HG02634 cell line

value: HG02634 LCLs; Donor from the Gambian in Western Divisions in the Gambia (GWD)

value: adult

value: ENCBS448TFZ at ENCODE; https://www.encodeproject.org/ENCBS448TFZ/


title: V084-CGND-HRA-02960-A

description: Library name: V084-CGND-HRA-02960-A


title: total RNA-seq from GM18520 (ENCLB114SMV)

description:
https://www.encodeproject.org/experiments/ENCSR578QTT/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR578QTT
assay title: total RNA-seq
encode release date: 2026-05-12
lab: Stephen Montgomery, Stanford
library encode accession: ENCLB114SMV
nucleic acid starting quantity: 32
nucleic acid starting quantity units: µg

source_name: Homo sapiens GM18520 cell line

value: cell line

value: GM18520 LCLs; Donor from the Yoruba in Ibadan, Nigeria (YRI)

value: female

value: unknown

value: ENCBS806LNI at ENCODE; https://www.encodeproject.org/ENCBS806LNI/

value: Derived from ENCODE donor ENCDO054PBW; https://www.encodeproject.org/ENCDO054PBW/


title: V083-CGND-HRA-02960-A

description: Library name: V083-CGND-HRA-02960-A