title: NimbleGen Burkholderia pseudomallei K96243 385K tiling array [071211_BPK96243_CO_Tiling]
status: Public on Sep 12 2013
contact.city: Singapore
contact.first: Wen Fong
contact.last: Ooi
contact.email: ooiwf@gis.a-star.edu.sg
contact.address: 60 Biopolis Street, Genome, #02-01
contact.country: Singapore
contact.institute: Genome Institute of Singapore
organism: Burkholderia pseudomallei K96243
description: NimbleGen design name 071211_BPK96243_CO_Tiling. A 385K tiling expression array fabricated by Roche NimbleGen (Roche NimbleGen, USA) based on the BpK96243 reference genome PRJNA57733_AssemblyASM1154v1 (Holden et al. 2004). The array contains 384,926 50-mer oligonucleotide probes representing both sense and antisense strands, with an overlapping mean distance of 15 bp between adjacent probes. Collectively, 95.1% of the BpK96243  non-repetivitive genome, including genic and intergenic regions, are represented on the array. Control probes without sequence similarity  to BpK96243 were included for background correction and array alignment.
manufacture_protocol: High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.