title: [Mapping10K_Xba131] Affymetrix Human Mapping 10K SNP Array
status: Public on May 28 2004
contact.city: Santa Clara
contact.last: Affymetrix
contact.email: geo@ncbi.nlm.nih.gov, support@affymetrix.com
contact.state: CA
contact.country: USA
contact.web_link: http://www.affymetrix.com/index.affx
contact.institute: Affymetrix, Inc.
contact.phone: 888-362-2447
organism: Homo sapiens
description: Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html
  
  The GeneChip® Human Mapping 10K Array enables genotyping of greater than 10,000 Single Nucleotide Polymorphism (SNP) loci on a single array. The SNPs on this array were chosen from The SNP Consortium (TSC) database based on their presence on 250- to 1,000-basepair Xba I fragments in the human genome. SNPs were chosen based upon high reproducibility, call rate, accuracy, and physical map position. These SNPs have been validated across a minimum of 200 individuals from at least three distinct populations, Caucasian, Asian, and African-American. The average heterozygosity of the markers is greater than .35 across these populations.
  
  Annotations taken from CSV (2.8 MB, 3/11/05).
manufacture_protocol: see manufacturer's web site