title: Arabidopsis thaliana high-throughput small RNA sequencing
status: Public on Nov 02 2006
contact.city: Cambridge
contact.first: Ramya
contact.last: Rajagopalan
contact.state: MA
contact.address: 9 Cambridge Center
contact.country: USA
contact.web_link: http://web.wi.mit.edu/bartel/pub/
contact.institute: Whitehead Institute for Biomedical Research, MIT Department of Biology
organism: Arabidopsis thaliana
description: High-throughput sequencing of endogenous small RNAs from Arabidopsis thaliana. This dataset contains sequences of genome-matching small RNAs generated from cDNA libraries of wild-type seedling, rosette, flower and silique tissues, and mapping to the Arabidopsis nuclear, chloroplast and/or mitochondrial genomes.
  For isolation protocol please see Axtell, M.J., Jan, C., Rajagopalan, R., and Bartel, D.P. (2006) A two-hit trigger for siRNA biogensis in plants.  Cell 127:565-577.
manufacture_protocol: See 454 website for details, http://www.454.com/