title: Nimblegen Condensed array of hg17 v1.0
status: Public on Jan 01 2007
contact.city: La Jolla
contact.first: Bing
contact.last: Ren
contact.email: biren@ucsd.edu
contact.state: CA
contact.address: 9500 Gilman Drive
contact.department: Department of Cellular and Molecular Medicine
contact.country: USA
contact.institute: Ludwig Institute for Cancer Research
organism: Homo sapiens
description: A condensed array was used to verify the results from the whole genome scan arrays.  It contained a total of 742,156 oligonucleotides to represent the 15,221 putative CTCF binding sequences plus 44 ENCODE regions, each ranging in size from 500 Kbp to 1.9 Mbp at 100 bp resolution.  Each of the 15,221 binding sites were extended at both ends by 2.5 Kbp upstream and downstream of the site.
manufacture_protocol: Whole human genome tiling arrays and the design principle of this array has been described previously (Kim et al., 2005b).