title: NimbleGen Streptomyces avermitilis 4.7K
status: Public on Jul 02 2009
contact.city: Shanghai
contact.first: Lei
contact.last: Chen
contact.address: 300 Fenglin Road
contact.country: China
contact.institute: Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences
organism: Streptomyces avermitilis
description: NimbleChip Expression Oligonucleotide Customer Microarrays (Roche NimbleGen, USA) designed for S. avermitilis were employed. For each gene, 10 different oligonucleotides were designed and every oligonucleotide was repeated 5 times on each slide. Each slide contains 385,000 60mer oligonucleotides. The array containing a total of 7645 ORFs of S. avermitilis was manufactured as described before (Nuwaysir et al., 2002)
  The Platform data table reflects a condensed representation of the expression array's replicate (SEQ_ID) features.  The .ndf and .ngd files are linked below as supplementary files.
manufacture_protocol: High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.