title: NimbleGen/Yamaga Streptococcus pyogenes 7k ID_2222
status: Public on May 01 2010
contact.city: Honolulu
contact.first: Alan
contact.middle: Francis
contact.last: Garcia
contact.email: afgarcia@hawaii.edu
contact.state: Hawaii
contact.address: 651 Ilalo Street
contact.department: Tropical Medicine, Medical Microbiology and Pharmacology
contact.country: USA
contact.institute: John A Burns School of Medicine
contact.phone: 808-692-1625
organism: Streptococcus pyogenes
description: NimbleGen design name 2005-08-12_B_fragilis_24mer, NimbleGen design ID 2451. A 1:2 expression design for 4,302 genes from Bacteroides fragilis NCTC 9343 and associated plasmid pBF9343 with fourteen 24-mer probe pairs (PM/MM) per gene. Each probe is replicated 3 times. The design includes random GC and other control probes.
  The Platform data table reflects a condensed representation of the expression array's replicate (SEQ_ID) features. The .ndf and .ngd files are linked below as supplementary files.
  1:2 design of 5 strains of S. pyogenes specified by customer. Each probe replicated 2x on chip. DRU update of design 1369.
  Streptococcus pyogenes (M1_GAS NC_002737; MGAS10394 NC_006086; MGAS315 NC_004070; MGAS5005 NC_007297; MGAS6180 NC_007296; MGAS8232 NC_003485; SSI-1 NC_004606)
manufacture_protocol: High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.