title: [Vitis_Vinifera] Affymetrix Vitis vinifera (Grape) Genome Array
status: Public on Jul 01 2004
contact.city: Santa Clara
contact.last: Affymetrix
contact.email: geo@ncbi.nlm.nih.gov, support@affymetrix.com
contact.state: CA
contact.country: USA
contact.web_link: http://www.affymetrix.com/index.affx
contact.institute: Affymetrix, Inc.
contact.phone: 888-362-2447
organism: Vitis vinifera
description: Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html
  
  The GeneChip® Vitis vinifera Genome Array is the first array to provide comprehensive coverage of the V. vinifera genome.
  
  14,000 V. vinifera transcripts and 1,700 transcripts from other Vitis species can be interrogated.
  
  Oligonucleotide probes complementary to each corresponding sequence are synthesized in situ on the arrays. Sixteen pairs of oligonucleotide probes are used to measure the level of transcription of each sequence represented on the GeneChip® Vitis vinifera (Grape) Genome Array. Sequences used in the design of the V. vinifera Genome Array were selected from GenBank®, dbEST, and RefSeq. The sequence clusters were created from the UniGene database (Build 7, Oct 2003).
  
  Annotations derived from Affymetrix CSV file dated 6/23/2004
manufacture_protocol: see manufacturer's web site