title: Mus musculus 156K NotSAT tiling array
status: Public on Jul 17 2009
contact.city: Tokyo
contact.first: Mayumi
contact.last: Oda
contact.email: moda@sc.itc.keio.ac.jp
contact.address: 35 Shinanomachi, Shinjuku
contact.country: Japan
contact.institute: Keio University
organism: Mus musculus
description: NotSAT array is a tilling array designed for NotI site-related and sense-antisense transcripts (SATs). The fragment value was calculated by corresponding probe values by taking the median probe. Since the normalization was performed after summarizing the fragment value, PLATFORM contains just summarized data. "Raw data file" contains the raw data and the platform table for the raw data.
manufacture_protocol: NotSAT array is a tilling array designed for NotI site-related and sense-antisense transcripts (SATs). Each genomic DNA fragments generated by combined HpyCH4IV and TaqI were to be measured by tilling probes covering the region that derives a fragment (corresponding probes). The fragment value was defined as the median value of corresponding probes. Since the normalization was performed after summarizing the fragment value, PLATFORM contains just summarized data. "Raw data file" contains the raw data and the platform table for the raw data.