title: Entamoeba histolytica E_his-1a520285F array (coding regions)
status: Public on Dec 06 2006
contact.city: Stanford
contact.first: Gretchen
contact.middle: Marie
contact.last: Ehrenkaufer
contact.email: gehrenk@stanford.edu
contact.state: CA
contact.address: 269 Campus Dr.
contact.department: Chemical and Systems Biology
contact.country: USA
contact.institute: Stanford Uninversity
organism: Entamoeba histolytica
manufacture_protocol: A custom generated Affymetrix platform full genome microarray (E_his-1a520285F). This array has 7,712 unique probe sets representing 9,435 open reading frames (ORFs). Due to the highly repetitive nature of the E. histolytica genome, some of the probe sets are predicted to cross-hybridize with other sequences. Probe sets that represent a single gene are labeled as (_at). Probe sets in which at least one probe may cross-hybridize with another gene(s) are labeled as (_x_at). In situations where all the probe sets for a given gene cross-hybridize with another gene(s), the probe sets are labeled as (_s_at) and additional genes that cross-hybridize with these probe sets are listed in Supplementary Table 2. This array also contains probes for intergenic non-coding regions, however, these are not included in this submission.