title: JCVI Aspergillus fumigatus AF293 29.9K amplicon array [ORF version]
status: Public on Nov 29 2011
contact.city: Tel-Aviv
contact.first: Nir
contact.last: Osherov
contact.email: nosherov@post.tau.ac.il
contact.address: Ramat Aviv Campus
contact.department: Medical Microbiology and Immunology
contact.country: Israel
contact.institute: Tel-Aviv University
contact.phone: 972 3 640 9599
organism: Aspergillus fumigatus Af293
description: This platform represents the ORF-centere version of GPL10341.
manufacture_protocol: The PCR amplicon microarray was designed based on CDS annotated from the A. fumigatus AF293 whole genome sequence.  The array consists of 29,952 spots.  The spots represent 9796 A. fumigatus AF293 genes spotted in triplicate with the remaining spots being empty.   The PCR products were printed on Corning glass UltraGAPs amino-silane coated slides at JCVI using a high density automated arrayer (Intelligent Automation, Cambridge, MA 02139).  The array consists of spots arranged 26 x 24 grids.  There are 48 grids in 4 columns (meta-columns) and 12 rows (meta-rows).