title: Custom Nimblegen aCGH chip targeted to canFam2 segmental duplications.
status: Public on Oct 31 2008
contact.city: Seattle
contact.first: Thomas
contact.middle: J
contact.last: Nicholas
contact.email: tjn3@u.washington.edu
contact.state: WA
contact.address: 1705 NE Pacific St. Foege Building
contact.department: Genome Sciences
contact.country: USA
contact.institute: University of Washington
contact.phone: 206 897-1846
organism: Canis lupus familiaris
description: Segmental duplications were computationally identified and then were targeted with 368,360 probes.  The remaining available probes were placed in 5kb flanking regions  to the segmental duplications (9,278 probes) and in single copy control regions (8,790 probes).
manufacture_protocol: Normal Nimblegen parameters were used with relaxed repeat constraints to enable probe placement in segmental duplication regions.