title: Nimblegen 385K pig array CGH
status: Public on Sep 15 2008
contact.city: Tjele
contact.first: Jakob
contact.last: Hedegaard
contact.email: Jakob.Hedegaard@ki.au.dk
contact.address: PO-box 50
contact.department: Department of Genetics and Biotechnology
contact.country: Denmark
contact.institute: Aarhus University, Faculty of Agricultural Sciences
contact.phone: (+45)89991363
organism: Sus scrofa
description: The probes on the array covered part of the chromosomes 4, 7, 14 and 17 for the Sus Scrofa preliminary assembly version 3, August 2007. The sequence data were produced by the Sus Scrofa Sequencing Group at the Sanger Institute.
  Detailed information about probe design is available in the Nimblegen technical note (see Web Link).
manufacture_protocol: Maskless array synthesis was used to construct isothermal arrays. Probes were selected with a minimum probe spacing of 285 bp and the resulting array had a median probe spacing of 409 bp. Probes were synthesized using an isothermal format (Tm = 76°C) and varied in length from 50 to 75 bp.