title: Aquagenomic Sparus aurata oligonucleotide-microarray (SAQ) (condensed version)
status: Public on Jul 09 2014
contact.city: Castellón
contact.first: Josep
contact.middle: A
contact.last: Calduch-Giner
contact.email: j.calduch@csic.es
contact.address: Ribera de Cabanes
contact.country: Spain
contact.institute: Institute of Aquaculture Torre de la Sal (CSIC)
contact.phone: 0034964319500
organism: Sparus aurata
description: A total of 43,398 oligonucleotide probes were used to construct a high-density seabream microarray based on the Agilent 4 x 44 K design format. 7,285 transcripts with annotated sequences were spotted in triplicate onto the slide (total probes 21,855), as well as 8,377 ESTs without annotation, 183 enriched sequences (GenBank) with 15 replicated probes (total probes 2,745), and finally 1,417 internal control probes of Agilent (N = 43,398). The platform developed used all available public ESTs stored and annotated in the Aquagenomic Consortium seabream library (10K).
manufacture_protocol: See manufacturer's web site at http://www.agilent.com .