title: Agilent-020166 Ca21_GE_plus_tiling_2.0 (Feature Number version)
status: Public on Jun 01 2013
contact.city: San Francisco
contact.first: Aaron
contact.last: Hernday
contact.state: Ca
contact.address: 600 15th st
contact.country: USA
contact.institute: UC San Francisco
organism: Candida albicans
description: This is an expression array built off of the C. albicans genome assembly 21 orf list, with the alpha locus and additional tiling probes spanning the WOR1, WOR2, WOR3, CZF1 and EFG1 loci.  This is the same as AMADID 020128 with the exception of the additional tiling probes for mapping transcription start sites.
  
  Arrays of this design have barcodes that begin with 16020166 or 2520166.
  
  Orientation:
  Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.
  
  The ID column represents the Agilent Feature Extraction feature number.
  
  Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).
  
  To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
  
  *** A different version of this platform with the Agilent Probe names in the ID column is assigned accession number GPL16260.
manufacture_protocol: see manufacturer's web site at http://www.agilent.com/