title: Agilent-036809 Bos taurus custom 8x60K array [Feature number version]
status: Public on Aug 20 2019
contact.city: Jouy-en-Josas
contact.first: Mariam
contact.last: Raliou
contact.email: mariam.raliou@inrae.fr
contact.address: Allée de Vilvert
contact.department: PHASE
contact.country: France
contact.institute: INRAE
contact.phone: +33(1)34652377
organism: Bos taurus
description: Custom bovine Gene Expression array 8x60K designed on bovine annotated Ensembl transcripts (http://www.ensembl.org/index.html, genome assembly UMD3.1) completed with 2100 Ensembl references representing 1632 NCB1 specific transcripts (https://www.ncbi.nlm.nih.gov/) found on the INRA 22K array
  
  BDRiPud
  Arrays of this design have barcodes that begin with 16036809 or 2536809.
  
  Orientation:
  Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.
  
  The ID column represents the Agilent Feature Extraction feature number.
  
  Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).
  
  To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
  
manufacture_protocol: see manufacturer's web site at http://www.agilent.com/