title: NimbleGen-Zebrafish-135k-UvA-v1.0
status: Public on Nov 01 2016
contact.city: Amsterdam
contact.first: Han
contact.last: Rauwerda
contact.email: j.rauwerda@uva.nl
contact.state: Nederland
contact.address: Sciencepark 904
contact.department: SILS
contact.country: Netherlands
contact.institute: University of Amsterdam
organism: Danio rerio
description: NimbleGen design name 100922;  A zebrafish 60 mer array (Zv9) containing probesets of up to 3 probes (numbered 1, 2, and 3 from the 3' end forward). See:  doi:10.1186/1756-0500-3-192. The design includes 5,000 negative control probes (NC), 5,000 Spatial Control probes (SC), 1,300 Concentration Control probes (CC) and 6,545 Amplification Control (AC) probes; AC_PM probes are designed to perfectly match the spiked-in molecule, AC_MM probes have a number of mismatches to the spiked-in molecule indicated by a number following '_mm_'.
  100922_DanioRerio_FW_EXP.ndf
  100922_DanioRerio_FW_EXP_HX12.ncd
manufacture_protocol: High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology.