title: Agilent Krill v1.1 (Agilent Design ID: 034463)
status: Public on Jul 23 2013
contact.city: Padova
contact.first: Cristiano
contact.last: De Pitta
contact.email: cristiano.depitta@unipd.it
contact.address: Via U. Bassi, 58/B
contact.department: Biology
contact.country: Italy
contact.institute: University of Padova
contact.phone: +390498276210
organism: Euphausia superba
description: Arrays of this design have barcodes that begin with 16034463 or 2534463.
  Orientation:
  Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.
  The ID column represents the Agilent Feature Extraction feature number.
  Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).
  To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
  Microarrays were synthesized in situ using the Agilent ink-jet technology with 8 x 60 K format. A total of 32,217 probes representing 32,277 E. superba transcripts were successfully obtained. So, microarray custom platform, named “Krill 1.1” (eArray Design ID: 034463), showed 29,440 duplicate probes and 2,777 single probes. Each array included default positive (1,011 probes) and negative (308 probes) controls.
manufacture_protocol: see manufacturer's web site at http://www.agilent.com/