title: Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version; reannotated)
status: Public on Jan 31 2017
contact.city: São Paulo
contact.first: Eduardo
contact.middle: Moraes
contact.last: Reis
contact.email: emreis@iq.usp.br
contact.state: SP
contact.address: Av. Prof. Lineu Prestes, 748
contact.department: Biochemistry
contact.country: Brazil
contact.institute: University of São Paulo
contact.phone: +55-11-30912173
organism: Homo sapiens
description: Reannotation aimed to improve and update the information of array probes that interrogate long noncoding RNAs (lncRNA). The reannotation pipeline involved probe mapping to the human genome followed by filtering of probes with multiple alignments to the human genome sequence and the cross-reference of probe genomic coordinates with those from the most updated lncRNA compendia (GENCODE, Broad Institute Human lincRNA, LNCipedia, NONCODE). Details are provided in the associated publication.
manufacture_protocol: see manufacturer's web site at http://www.agilent.com/