title: Nimblegen OID24708_Human, Design: 091105_HG18_AS_ChIP_HX1
status: Public on Aug 17 2016
contact.city: Guangzhou
contact.first: Alexander
contact.middle: V.
contact.last: Strunnikov
contact.email: alexstrunnikov@gmail.com
contact.state: Guangdong
contact.address: 190 Kai Yuan Avenue
contact.country: China
contact.institute: GIBH
organism: Homo sapiens
manufacture_protocol: Roche-Nimblegen proprietary. The design of the arary was custom tiling design for repeat regions in the hg18 genome using TRF database sequences.  Straight-tiling through the sequences using isothermal 50-75mers (target 76C) using an interval of 44 (2,137,330 probes).  No uniqueness checking was performed as it was a repeat array.  The sequence for any initial sequence that was smaller than 50 bases was extended with itself in tandem, so that it would be >=50. The design included two control sets composed of 29,161 random sequence tiles and 181 tiles from the rDNA locus of S. cerevisiae.