title: 101230_VR_Cdiff_strains_expr
status: Public on May 27 2015
contact.city: Iowa City
contact.first: Craig
contact.middle: D.
contact.last: Ellermeier
contact.email: craig-ellermeier@uiowa.edu
contact.state: IA
contact.address: 51 Newton Rd 3-630 BSB
contact.department: Microbiology
contact.country: USA
contact.institute: University of Iowa
contact.phone: 319-384-4565
organism: Clostridioides difficile 630
description: Prokaryote Expression 12x135K custom array delivery; design name, 101230_VR_Cdiff_strains_ex- pr_HX12; design no. 546991). Each of the 12 subarrays included 18 probes (60 oligomers each) homologous to 3,786 of the 3,787 open reading frames of the C. difficile 630 genome as well as negative hybridization controls. TheNimbleGen design name 101230_VR_Cdiff_strains_expr.ndf, NimbleGen RNG# 560976  A 12x135K expression design for 4,302 genes from Clostridium difficile CD630 and Clostridium difficile R20291.  The design includes random GC and other control probes.
  The Platform data table reflects a condensed representation of the expression array's replicate (SEQ_ID) features.  The .ndf and .ngd files are linked below as supplementary files.
manufacture_protocol: High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.