title: Agilent-027929 AI_hybridCell_17q21_v3
status: Public on Jun 02 2012
contact.city: Seattle
contact.first: Andy
contact.last: Itsara
contact.state: WA
contact.address: Foege Building S-250, Box 355065, 3720 15th Ave NE
contact.department: Genome Sciences
contact.country: USA
contact.web_link: http://eichlerlab.gs.washington.edu
contact.institute: University of Washington School of Medicine
organism: Mus musculus
description: Custom Design for hybing hybrid cells to determine 17q21 breakpoints.
  
  Arrays of this design have barcodes that begin with 16027929 or 2527929.
  
  Orientation:
  Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.
  
  The ID column represents the Agilent Feature Extraction feature number.
  
  Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).
  
  To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
  
manufacture_protocol: see manufacturer's web site at http://www.agilent.com/