Specificity of 2-keto-3-deoxygluconate-6-P aldolase for open chain form of 2-keto-3-deoxygluconate-6-P.
2-Keto-3-deoxygluconate-6-P exists as an euqilibrium of three forms at 25 degrees measurable by 13C NMR: alpha-furanose anomer (41%), beta-furanose anomer (50%), and open chain keto (9%). The three forms are interconverted rapidly (greater than 0.5 s-1) so that the unidirectional rates of furanose ring opening and closing can be quantitated by an NMR line broadening method. The 2-keto-3-deoxygluconate aldolase is specific for only one of these forms, the open chain keto form. The rates for ring opening calculated from the rapid kinetic enzyme system compare closely with those obtained with the NMR method.
D000446:Aldehyde-Lyases / Q000378:metabolism*; D005942:Gluconates / Q000378:metabolism; D006863:Hydrogen-Ion Concentration; D007651:Keto Acids / Q000378:metabolism; D007700:Kinetics; D009682:Magnetic Resonance Spectroscopy; D008968:Molecular Conformation; D009243:NAD / Q000378:metabolism; D011549:Pseudomonas / Q000201:enzymology; D013056:Spectrophotometry, Ultraviolet; D013329:Structure-Activity Relationship
D005942:Gluconates; D007651:Keto Acids; D009243:NAD; D000446:Aldehyde-Lyases