Identification of strains of herpes simplex virus by comparison of the density of their DNA using the preparative ultracentrifuge.
The buoyant densities of the DNA of herpes simplex virus type 1, type 2 and Pseudorabies virus, as determined in the analytical ultracentrifuge, are 1.725, 1.727 and 1.731 correlating with G+C contents of 67, 69 and 73 per cent respectively. The density differences for the DNA's of type 1 and type 2 herpes simplex viruses have been confirmed in experiments with isotopically labelled DNA from four type 1 and six type 2 strains by preparative CsCl gradient ultracentrifugation. The DNA of all the type 2 strains was denser than that of any of the type 1 strains examined. Despite these differences in DNA base composition of type 1 and type 2 strains, nearest neighbour analysis of their DNA's disclosed no obvious differences in doublet pattern or general design.
D001483:Base Sequence; D002499:Centrifugation, Density Gradient; D002500:Centrifugation, Isopycnic; D003596:Cytosine / Q000032:analysis; D004279:DNA, Viral / Q000032:analysis*; D006147:Guanine / Q000032:analysis; D018139:Simplexvirus / Q000032:analysis / Q000145:classification*; D013045:Species Specificity
D004279:DNA, Viral; D006147:Guanine; D003596:Cytosine