title: Sequence of an oligonucleotide derived from the 3' end of each of the four brome mosaic viral RNAs.
abstract: A 3'-terminal oligonucleotide fragment, 161 bases long, can be obtained from each of the four brome mosaic virus RNAs by means of nuclease digestion. Like the four intact brome mosaic virus RNAs, each fragment accepts tyrosine in a reaction catalyzed by wheat germ aminoacyl-tRNA synthetase. The complete nucleotide sequence of the RNA 4 fragment has been determined by use of standard radiochemical methods. Comparative data for the fragments from RNAs 1, 2, and 3 show that they have nearly the same sequence as the RNA 4 fragment. The eight bases adjacent to the 3' terminus of the RNA 4 fragment are identical in sequence to the eight terminal bases of tyrosine tRNA from Torula utilis and eleven interior bases are identical in sequence to eleven bases encompassing the anticodon region of tyrosine tRNA from Saccharomyces cerevisiae, T. utilis, and Escherichia coli. Nevertheless, reasonable base-pairing schemes yield, at best, a distorted cloverleaf secondary structure.
mesh_terms: D001483:Base Sequence; D009029:Mosaic Viruses / Q000032:analysis*; D009690:Nucleic Acid Conformation; D009841:Oligonucleotides / Q000032:analysis; D009843:Oligoribonucleotides / Q000032:analysis; D010942:Plant Viruses / Q000032:analysis*; D012367:RNA, Viral; D012260:Ribonucleases
chemical_list: D009841:Oligonucleotides; D009843:Oligoribonucleotides; D012367:RNA, Viral; D012260:Ribonucleases
references.citation: J Gen Virol. 1977 Jan;34(1):177-82
references.pmid: 188978
references.citation: Eur J Biochem. 1977 Feb;72(3):465-78
references.pmid: 402264
references.citation: Proc Natl Acad Sci U S A. 1977 Jul;74(7):2682-6
references.pmid: 268617
references.citation: Anal Biochem. 1977 Feb;77(2):562-6
references.pmid: 842841
references.citation: Cell. 1976 Dec;9(4 PT 2):645-53
references.pmid: 1017010
references.citation: Nature. 1974 May 3;249(452):32-4
references.pmid: 4364352
references.citation: Biochem J. 1972 Oct;129(4):969-76
references.pmid: 4655830
references.citation: Nat New Biol. 1973 Feb 7;241(110):166-8
references.pmid: 4573267
references.citation: Nat New Biol. 1973 Nov 14;246(150):40-1
references.pmid: 4519026
references.citation: J Virol. 1974 May;13(5):1134-42
references.pmid: 4132920
references.citation: Biochem Biophys Res Commun. 1972 Aug 21;48(4):927-32
references.pmid: 4344282
references.citation: Nature. 1970 Jun 6;226(5249):954-6
references.pmid: 4315653
references.citation: J Mol Biol. 1976 Jun 5;103(4):737-45
references.pmid: 940163
references.citation: Proc Natl Acad Sci U S A. 1975 Mar;72(3):1189-93
references.pmid: 165487
references.citation: Biochimie. 1974;56(3):423-8
references.pmid: 4605165
references.citation: J Biol Chem. 1974 Sep 25;249(18):5801-8
references.pmid: 4606566
references.citation: Proc Natl Acad Sci U S A. 1973 Apr;70(4):1041-5
references.pmid: 4577787
references.citation: Prog Nucleic Acid Res Mol Biol. 1972;12:49-85
references.pmid: 4557059
references.citation: Nature. 1976 Jul 1;262(5563):32-7
references.pmid: 180425
references.citation: Nature. 1974 May 24;249(455):353-5
references.pmid: 4841365
references.citation: Eur J Biochem. 1973 Feb 15;33(1):192-200
references.pmid: 4691350
references.citation: J Mol Biol. 1972 Mar 14;64(2):353-62
references.pmid: 5023181
references.citation: Prog Nucleic Acid Res Mol Biol. 1971;11:489-525
references.pmid: 4934251
references.citation: Virology. 1967 Nov;33(3):385-97
references.pmid: 4863171
references.citation: J Mol Biol. 1965 Sep;13(2):373-98
references.pmid: 5325727
references.citation: Nature. 1975 Aug 21;256(5519):624-8
references.pmid: 807854
references.citation: Nucleic Acids Res. 1975 Jun;2(6):865-71
references.pmid: 1096085
references.citation: J Virol. 1976 Aug;19(2):637-42
references.pmid: 957483
references.citation: Proc Natl Acad Sci U S A. 1976 Mar;73(3):737-41
references.pmid: 1062783
references.citation: Proc Natl Acad Sci U S A. 1975 Mar;72(3):864-8
references.pmid: 1055385
references.citation: J Gen Virol. 1975 Mar;26(3):321-5
references.pmid: 1120938