The interaction of natural tetra-azacyclopentazulene dyes with DNA and their effects on the DNA and RNA polymerase reactions.
The interaction of two natural tetra-azacyclopentazulene dyes with native calf thymus DNA was studied by means of microcalorimetric, viscosimetric, and spectroscopic measurements. The results are consistent with the hypothesis of an intercalative-binding. However, comparison of calorimetric studies shows that the changes in enthalpy associated with the interaction of these compounds with DNA are, in absolute value, significantly lower than those found with known intercalating agnets (daunomycin, ethidium bromide).  The influence of these dyes on the template capacity of DNA in the in vitro synthesis of nucleic acids was also determined.  Under the conditions used, these compounds selectively inhibited DNA synthesis.  No appreciable inhibitory effect upon E. coli RNA polymerase was observed.  Both compounds had greater inhibitory effect on rat liver high molecular weight DNA polymerase than E. coli DNA polymerase I.  Zoanthoxanthin was a more effective inhibitor than 3-norzoanthoxanthin.
D000818:Animals; D001665:Binding Sites; D002151:Calorimetry; D002417:Cattle; D004396:Coloring Agents / Q000494:pharmacology; D003508:Cycloheptanes / Q000494:pharmacology; D004247:DNA; D004254:DNA Nucleotidyltransferases / Q000378:metabolism*; D012321:DNA-Directed RNA Polymerases / Q000378:metabolism*; D004123:Dimethylamines / Q000494:pharmacology; D004926:Escherichia coli / Q000201:enzymology; D007093:Imidazoles / Q000494:pharmacology; D007700:Kinetics; D009690:Nucleic Acid Conformation; D013053:Spectrophotometry; D013056:Spectrophotometry, Ultraviolet; D013816:Thermodynamics; D013950:Thymus Gland; D014783:Viscosity
D004396:Coloring Agents; D003508:Cycloheptanes; D004123:Dimethylamines; D007093:Imidazoles; C010617:3-norzoanthoxanthin; D004247:DNA; D004254:DNA Nucleotidyltransferases; D012321:DNA-Directed RNA Polymerases