title: Structural and membrane modifying porperties of suzukacillin, a peptide antibiotic related to alamethicin. Part B. Pore formation in black lipid films.
abstract: Suzukacillin, a polypeptide consisting of presumably 23 amino acids and 1 phenylalaninol, is produced by a Trichoderma viride strain No. 1037 and it can be isolated from the culture medium. It shows membrane-modifying properties similar to those of alamethicin. Discrete condustance fluctuations indicate the formation of oligomer pores of varying diameter. On the basis of voltage jump relaxation experiments evidence is given that the dimer is the nucleation state from which pore formation starts and the oligomer disappears. According to the voltage-current characteristics, voltage-dependent and voltage-independent conductances are observed. A slow process is involved, which can be interpreted as a change in the equilibrium distribution between different conformations of the suzukacillin monomer at the membrane interphase. This change results from its interaction with the lipid matrix. Differences in experimental observations between suzukacillin and alamethicin are attributed to the relatively larger alpha-helix and higher number of aliphatic side chains of the suzukacillin monomer and to a more intense interaction with the lipid membrane. This leads to a higher probability of forming dimers from monomers and to the occurrence of "inactivation".
mesh_terms: D000408:Alamethicin; D000900:Anti-Bacterial Agents; D001665:Binding Sites; D004553:Electric Conductivity; D007700:Kinetics; D008433:Mathematics; D008567:Membranes, Artificial; D008958:Models, Molecular; D010455:Peptides; D010714:Phosphatidylethanolamines; D011485:Protein Binding; D011487:Protein Conformation; D013816:Thermodynamics; D014242:Trichoderma
chemical_list: D000900:Anti-Bacterial Agents; D008567:Membranes, Artificial; D010455:Peptides; D010714:Phosphatidylethanolamines; D000408:Alamethicin