The chemical modification of papain with 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide.
The reaction of the water-soluble carbodimide, 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide (EDC), with active papain in the presence of the nucleophile ethyl glycinate results in an irreversible inactivation of the enzyme. This inactivation is accompanied by the derivatization of the catalytically essential thiol group of the enzyme (Cys-25) and by the modification of 6 out of 14 of papain's carboxyl groups and up to 9 out of 19 of the enyzme's tyrosyl residues. No apparent irreversible modification of histidine residues is observed. Mercuripapain is also irreversibly inactivated by EDC/ethyl glycinate, again with the concomitant modification of 6 carboxyl groups, up to 10 tyrosyl residues, and no histidine residues; but in this case there is no thiol derivatization. Treatment of either modified native papain or modified mercuripapain with hydroxylamine results in the complete regeneration of free tyrosyl residues but does not restore any activity. The competitive inhibitor benzamidoacetonitrile substantially protects native papain against inactivation and against the derivatization of the essential thiol group as well as 2 of the 6 otherwise accessible carboxyl groups. The inhibitor has no effect upon tyrosyl modification. These findings are discussed in the context of a possible catalytic role for a carboxyl group in the active site of papain.
D000596:Amino Acids / Q000032:analysis; D001665:Binding Sites; D002234:Carbodiimides / Q000494:pharmacology; D005998:Glycine; D007700:Kinetics; D009682:Magnetic Resonance Spectroscopy; D008628:Mercury; D010206:Papain / Q000037:antagonists & inhibitors; D011485:Protein Binding; D011487:Protein Conformation
D000596:Amino Acids; D002234:Carbodiimides; D010206:Papain; D008628:Mercury; D005998:Glycine