title: Occurrence of alginate gene sequences among members of the pseudomonad rRNA homology groups I-IV.
abstract: Total genomic DNA of 13 pseudomonads representing rRNA homology groups I-IV were screened for sequences homologous to four Pseudomonas aeruginosa alginate (alg) genes by Southern hybridization. Biotinylated probes for three structural genes (algA, algC and algD) and one regulatory gene (algR1) were prepared. Genomic DNA of strains representing group I (P. syringae pv. glycinea, P. viridiflava and P. corrugata) hybridized with all four gene probes. Hybridizing fragments were of differing sizes, indicating that evolutionary divergence among group I members has occurred. P. corrugata has not been reported to synthesize alginate. Genomic DNA from representatives of groups II-IV gave no or very weak hybridization with the probes except for algC. This study indicates that the ability to produce alginic acid as an exopolysaccharide among the pseudomonads is restricted to members of rRNA homology group I in agreement with earlier physiological studies.
mesh_terms: D000464:Alginates / Q000378:metabolism*; D015342:DNA Probes; D004269:DNA, Bacterial / Q000235:genetics; D020723:Glucuronic Acid; D006603:Hexuronic Acids; D009693:Nucleic Acid Hybridization; D011549:Pseudomonas / Q000145:classification / Q000235:genetics* / Q000378:metabolism; D012329:RNA, Bacterial / Q000235:genetics*; D012335:RNA, Ribosomal / Q000235:genetics*; D012689:Sequence Homology, Nucleic Acid; D013045:Species Specificity
chemical_list: D000464:Alginates; D015342:DNA Probes; D004269:DNA, Bacterial; D006603:Hexuronic Acids; D012329:RNA, Bacterial; D012335:RNA, Ribosomal; D020723:Glucuronic Acid