Phylogenetic analysis of Alloiococcus otitis gen. nov., sp. nov., an organism from human middle ear fluid.
The partial 16S rRNA sequence of an unknown bacterium that was originally isolated from middle ear fluids of children with persistent otitis media was determined by reverse transcription. A comparison of this sequence with sequences from other gram-positive species having low guanine-plus-cytosine contents revealed that this bacterium represents a new line of descent, for which the name Alloiococcus otitis gen. nov., sp. nov., is proposed. The type strain is strain NCFB 2890.
Department of Microbiology, AFRC Institute of Food Research, Reading Laboratory, Shinfield, Reading, United Kingdom.
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Aguirre
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Collins
D001482:Base Composition; D001483:Base Sequence; D004432:Ear, Middle / Q000382:microbiology*; D006095:Gram-Positive Cocci / Q000145:classification* / Q000235:genetics; D006801:Humans; D008969:Molecular Sequence Data; D010033:Otitis Media / Q000382:microbiology*; D010802:Phylogeny; D012329:RNA, Bacterial / Q000737:chemistry*; D012336:RNA, Ribosomal, 16S / Q000737:chemistry*
D012329:RNA, Bacterial; D012336:RNA, Ribosomal, 16S