title: Complete determination of disulfide bonds localized within the short consensus repeat units of decay accelerating factor (CD55 antigen).
abstract: Decay accelerating factor (DAF) has 4 SCR (short consensus repeat) units. Each SCR unit consists of approx. 60 amino acids characterized by having four conserved cysteine residues and several other highly conserved residues which include proline, tryptophan, tyrosine/phenylalanine and glycine. To determine the disulfide-bonding pattern, we used the urine form of DAF. After thermolysin and trypsin digestion, we isolated seven disulfide-linked peptides by HPLC purification. Because all of the cysteine residues are disulfide-bonded, DAF should contain eight disulfide bonds. After subtilisin and trypsin digestion, we isolated the eighth disulfide-bonded peptides by HPLC purification. From sequence analyses of these peptides, we could identify all disulfide bonds in the 4 SCR units of DAF as being between the first and the third and between the second and the fourth half-cystines within each SCR unit.
authors.affiliation: Department of Physiological Chemistry, School of Pharmaceutical Sciences, Showa University, Tokyo, Japan.
authors.forename: Y
authors.initials: Y
authors.lastname: Nakano
authors.forename: K
authors.initials: K
authors.lastname: Sumida
authors.forename: N
authors.initials: N
authors.lastname: Kikuta
authors.forename: N H
authors.initials: NH
authors.lastname: Miura
authors.forename: T
authors.initials: T
authors.lastname: Tobe
authors.forename: M
authors.initials: M
authors.lastname: Tomita
mesh_terms: D000595:Amino Acid Sequence; D000596:Amino Acids / Q000032:analysis; D001798:Blood Proteins / Q000737:chemistry*; D018958:CD55 Antigens; D002851:Chromatography, High Pressure Liquid; D003169:Complement Inactivator Proteins / Q000737:chemistry*; D004220:Disulfides / Q000737:chemistry*; D006801:Humans; D008565:Membrane Proteins / Q000737:chemistry*; D008969:Molecular Sequence Data
chemical_list: D000596:Amino Acids; D001798:Blood Proteins; D018958:CD55 Antigens; D003169:Complement Inactivator Proteins; D004220:Disulfides; D008565:Membrane Proteins