The two polypeptide chains in fibronectin are joined in antiparallel fashion: NMR structural characterization.
The fibronectin C-terminal interchain disulfide-linked heptapeptide dimer (Val-Asn-Cys-Pro-Ile-Glu-Cys)2 has been investigated via 1H NMR spectroscopy in both water and dimethyl sulfoxide (DMSO) solutions. Proton Overhauser experiments in DMSO indicate unambiguously that the two fibronectin polypeptide chains are linked head-to-tail (N-terminus to C-terminus), in an antiparallel fashion. It is found that the structure of the peptide is extended. From the 1H NMR interproton distance and angle constraints, the preferred mean (time-averaged) conformations in both H2O and DMSO were derived using distance geometry and molecular mechanics algorithms. The two conformations, although significantly dissimilar, exhibit the common feature of a structurally parallel (as opposed to chemically antiparallel) fibronectin alpha/beta chain array.
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Department of Chemistry, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213-3890.
Jiménez-Barbero
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J
Petersen
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Llinás
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D000595:Amino Acid Sequence; D055598:Chemical Phenomena; D002627:Chemistry, Physical; D004121:Dimethyl Sulfoxide; D004220:Disulfides / Q000737:chemistry; D005353:Fibronectins / Q000737:chemistry*; D006801:Humans; D046911:Macromolecular Substances; D009682:Magnetic Resonance Spectroscopy; D008958:Models, Molecular; D008969:Molecular Sequence Data; D015394:Molecular Structure; D011487:Protein Conformation; D012996:Solutions; D013696:Temperature; D014867:Water
D004220:Disulfides; D005353:Fibronectins; D046911:Macromolecular Substances; D012996:Solutions; D014867:Water; D004121:Dimethyl Sulfoxide