title: Genetic dissection of the transcription cycle. A mutant RNA polymerase that cannot hold onto a promoter.
abstract: Deletion of 10 amino acids from a conserved motif in the beta subunit of Escherichia coli RNA polymerase (RNAP) leads to an interrupted transcription cycle and lethal phenotype. RNAP carrying the mutant subunit retains catalytic function and specificity of promoter recognition but is unable to efficiently hold onto DNA in the binary complex, resulting in a diminished initiation frequency. However, inefficient initiation by the mutant enzyme leads to processive and stable ternary elongating complex. Thus, the mutation dissects the traits of promoter selectivity, binary complex stability, and ternary complex processivity reflecting compartmentalization of function within the RNAP molecule.
authors.affiliation: Department of Microbiology, Columbia University College of Physicians and Surgeons, New York, New York 10032.
authors.forename: E
authors.initials: E
authors.lastname: Martin
authors.forename: V
authors.initials: V
authors.lastname: Sagitov
authors.forename: E
authors.initials: E
authors.lastname: Burova
authors.forename: V
authors.initials: V
authors.lastname: Nikiforov
authors.forename: A
authors.initials: A
authors.lastname: Goldfarb
mesh_terms: D000595:Amino Acid Sequence; D001483:Base Sequence; D004247:DNA / Q000378:metabolism; D012321:DNA-Directed RNA Polymerases / Q000235:genetics / Q000378:metabolism*; D004926:Escherichia coli / Q000201:enzymology; D005804:Genes, Lethal; D008969:Molecular Sequence Data; D010641:Phenotype; D011401:Promoter Regions, Genetic; D013698:Templates, Genetic; D014158:Transcription, Genetic
chemical_list: D004247:DNA; D012321:DNA-Directed RNA Polymerases