X-ray diffraction study of di and tetra-ligated T-state hemoglobin from high salt crystals.
X-ray diffraction difference electron density maps at 3 A resolution obtained from di and tetra-ligated T-state hemoglobin (Hb) crystals are reported. Crystals isomorphous with native deoxyhemoglobin were obtained from ammonium sulfate solutions incubated with the synthetic allosteric effector RSR-56. RSR-56 binds at two symmetry-related Hb central water cavity sites and each molecule has major interactions with three different subunit side-chains; one effector with Arg141 alpha 2 HC3, Lys99 alpha 1 G6 and Asn108 beta 1 and the other with the symmetry related residues, Arg141 alpha 1 Lys99 alpha 2 and Asn108 beta 2. Crystals mounted in a nitrogen filled glove box were di-ligated as previously found with polyethyleneglycol Hb crystals. Crystals mounted in air under a layer of mother liquor were bright red and showed all four heme groups ligated. The difference electron density from the di-ligated crystals showed atomic movements to be restricted to the immediate neighborhood of the heme groups and the allosteric effector. By contrast, the tetra-ligated structure showed extended difference electron density near amino acid residues around both alpha and beta heme groups and along the alpha 1/beta 2 interface. Ligation of the beta heme group appears to magnify the difference density around the alpha heme groups. There is no evidence of breakage of the Bohr salt bridge, His146 beta HC3----Asp94 beta FG1, in the crystal. The observed difference electron density maps may help to clarify the way the allosteric mechanism is triggered.
Abraham
D J
DJ
Department of Medical Chemistry, Medical College of Virginia, Virginia Commonwealth University, Richmond 23298-0540.
Peascoe
R A
RA
Randad
R S
RS
Panikker
J
J
D000328:Adult; D000495:Allosteric Site; D000814:Aniline Compounds; D003198:Computer Simulation; D006418:Heme / Q000737:chemistry; D006454:Hemoglobins / Q000737:chemistry*; D006801:Humans; D008958:Models, Molecular; D011422:Propionates; D011487:Protein Conformation; D012492:Salts; D014961:X-Ray Diffraction
D000814:Aniline Compounds; D006454:Hemoglobins; D011422:Propionates; D012492:Salts; D006418:Heme; C067396:efaproxiral