title: Unexpected racemization of proline or hydroxy-proline phenacyl ester during coupling reactions with Boc-amino acids.
abstract: When L-proline or O-benzyl-trans-4-hydroxy-L-proline phenacyl ester was coupled with Boc-amino acids in dimethylformamide using water-soluble carbodiimide (WSCI) in the presence of anhydrous 1-hydroxybenzotriazole (HOBt) as coupling reagents, extensive racemization was observed at the C alpha of the proline or hydroxy-proline residue. The extent of racemization was measured by HPLC after the coupling with Boc-L-Leu-OH in the presence or absence of HOBt. The extent of racemization increased when HOBt was added to the reaction mixture, but greatly decreased when it was not, indicating that HOBt was needed for inducing racemization. Almost no racemization was observed when the coupling reaction was carried out by the mixed anhydride procedure in tetrahydrofuran or by the carbodiimide method in dichloromethane without using HOBt. In the case of coupling reactions with ordinary L-amino acid phenacyl esters, no racemization was observed. Examination of some model systems yielded sufficient evidence to prove that HOBt is an efficient catalyst for racemizing proline or hydroxy-proline phenacyl ester not only in the stage of cyclic intermediate formation but also in the opening of the ring structure. Thus, the racemization reaction was found to be closely related to the formation of the cyclic carbinol-amine derivative.
authors.affiliation: Peptide Institute Inc., Protein Research Foundation, Osaka, Japan.
authors.forename: H
authors.initials: H
authors.lastname: Kuroda
authors.forename: S
authors.initials: S
authors.lastname: Kubo
authors.forename: N
authors.initials: N
authors.lastname: Chino
authors.forename: T
authors.initials: T
authors.lastname: Kimura
authors.forename: S
authors.initials: S
authors.lastname: Sakakibara
mesh_terms: D000098:Acetophenones / Q000737:chemistry*; D020916:Conotoxins; D004952:Esters / Q000737:chemistry*; D005563:Formic Acid Esters / Q000737:chemistry*; D006909:Hydroxyproline / Q000737:chemistry*; D010456:Peptides, Cyclic / Q000138:chemical synthesis; D011392:Proline / Q000737:chemistry*; D013237:Stereoisomerism; D014230:Triazoles / Q000737:chemistry
chemical_list: D000098:Acetophenones; D020916:Conotoxins; D004952:Esters; D005563:Formic Acid Esters; D010456:Peptides, Cyclic; D014230:Triazoles; C000345:t-butyloxycarbonyl group; C046101:conotoxin GIII; D011392:Proline; C011852:1-hydroxybenzotriazole; D006909:Hydroxyproline