title: Phytochrome evolution: a phylogenetic tree with the first complete sequence of phytochrome from a cryptogamic plant (Selaginella martensii spring).
abstract: We have sequenced cDNA and genomic clones coding for phytochrome of the fern Selaginella. On the amino acid level, this phytochrome shares sequence homologies with phytochromes of higher plants which range between 62 (phytochrome B of Arabidopsis) and 55 (56)% [phytochrome C of Arabidopsis (Avena)]. Introns in the Selaginella gene are short and occupy positions known from phytochrome sequences of higher plants. A rooted phylogenetic tree based on mutation distances puts Selaginella phytochrome closest to the hypothetical ancestor. A similar tree arises if the tree is constructed with partial sequences (about 200 amino acids) around the chromophore attachment site. An extension of this tree by sequences of other cryptogamic plants (Mougeotia, Ceratodon, Psilotum) shows all these sequences including those of the phytochromes B and C of Arabidopsis on a branch, well separated from the branch formed by phytochromes known to accumulate in etiolated plants. The rooted phytochrome phylogenetic tree, however, is difficult to reconcile with the fossil record.
authors: Botanisches Institut der Universität zu Köln, Germany.
authors: S
authors: S
authors: Hanelt
authors: B
authors: B
authors: Braun
authors: S
authors: S
authors: Marx
authors: H A
authors: HA
authors: Schneider-Poetsch
mesh_terms: D000595:Amino Acid Sequence; D001483:Base Sequence; D005075:Biological Evolution; D004247:DNA / Q000235:genetics; D008969:Molecular Sequence Data; D010802:Phylogeny; D010834:Phytochrome / Q000235:genetics*; D010944:Plants / Q000235:genetics; D017386:Sequence Homology, Amino Acid
chemical_list: D010834:Phytochrome; D004247:DNA