title: Interactions of thrombin with benzamidine-based inhibitors.
abstract: Trypsin and trypsin-like enzymes cleave C-terminal bonds of the basic amino acids Arg and Lys. Inhibitors of these enzymes have been found not only among Arg and Lys derivatives but also with structurally related benzamidines. Especially cyclic amides of 4-amidinophenylalanine were found to be inhibitors of thrombin. The most potent selective thrombin inhibitor of these type is N alpha-(beta-naphthylsulfonylglycyl)-4-amidinophenylalanine piperidine. From the X-ray crystal structures of thrombin and trypsin-inhibitor complexes the thrombin complexes formed with inhibitors derived from amidinophenylalanine have been modeled. These models allow valuable predictions to design inhibitors of improved selection and binding properties. Most recently, also the X-ray crystal structures of complexes of inhibitors with bovine thrombin have been solved.
authors.affiliation: Institut für Pharmakologie und Toxikologie, Medizinische Akademie Erfurt, FRG.
authors.forename: J
authors.initials: J
authors.lastname: Stürzebecher
authors.forename: H
authors.initials: H
authors.lastname: Vieweg
authors.forename: P
authors.initials: P
authors.lastname: Wikström
authors.forename: D
authors.initials: D
authors.lastname: Turk
authors.forename: W
authors.initials: W
authors.lastname: Bode
mesh_terms: D000818:Animals; D001550:Benzamidines / Q000494:pharmacology*; D006801:Humans; D013917:Thrombin / Q000037:antagonists & inhibitors* / Q000737:chemistry
chemical_list: D001550:Benzamidines; D013917:Thrombin