Lateral diffusion and aggregation. A Monte Carlo study.
Aggregation in a lipid bilayer is modeled as cluster-cluster aggregation on a square lattice. In the model, clusters carry out a random walk on the lattice, with a diffusion coefficient inversely proportional to mass. On contact, they adhere with a prescribed probability, rigidly and irreversibly. Monte Carlo calculations show that, as expected, rotational diffusion of the aggregating species is highly sensitive to the initial stages of aggregation. Lateral diffusion of an inert tracer obstructed by the aggregate is a sensitive probe of the later stages of aggregation. Cluster-cluster aggregates are much more effective barriers to lateral diffusion of an inert tracer than the same area fraction of random point obstacles is, but random point obstacles are more effective barriers than the same area fraction of compact obstacles. The effectiveness of aggregates as obstacles is discussed in terms of particle-particle correlation functions and fractal dimensions. Results are applicable to aggregation of membrane proteins, and at least qualitatively to aggregation of gel-phase lipid during lateral phase separation.
Saxton
M J
MJ
Institute of Theoretical Dynamics, University of California, Davis 95616.
D004058:Diffusion; D005782:Gels; D008433:Mathematics; D008565:Membrane Proteins / Q000737:chemistry* / Q000378:metabolism; D008962:Models, Theoretical; D009010:Monte Carlo Method; D011485:Protein Binding; D011487:Protein Conformation
D005782:Gels; D008565:Membrane Proteins