title: Restriction fragment length polymorphism of two HLA-B-associated transcripts genes in five autoimmune diseases.
abstract: The restriction fragment length polymorphism of the two human HLA-B-associated transcripts (BATs) genes, BAT1 and BAT2, identifying polymorphic bands of 12, 8, 2.5, and 1.1 kb, and at 3.3, 2.7, 2.3, and 0.9 kb, respectively, was investigated in patients with primary biliary cirrhosis (PBC), systemic lupus erythematosus (SLE), pauciarticular juvenile rheumatoid arthritis (P-JRA), rheumatoid arthritis (RA), and primary Sjögren's syndrome (pSS), and in healthy Danes. The BAT2/RsaI 2.7-kb band fragment was more frequent in PBC, pSS, and SLE than in controls, but the p values did not reach significance when corrected for multiple comparisons. For pSS and SLE, the associations may be secondary to primary associations with HLA-B8 because the BAT2/RsaI 2.3-kb band, which is allelic to the BAT2/RsaI 2.7-kb band, is strongly negatively associated with HLA-B8 and HLA-DR3. The only significance obtained shows that the HLA-B8 frequency is increased in BAT2/RsaI 2.7-kb positive pSS patients as compared to the corresponding controls indicating that the HLA-B8 association may be strongest. No missing or extra DNA fragments were observed in the disease groups when compared with controls indicating that gross deletions or duplications of the BAT1 and BAT2 genes in the patients are unlikely. In conclusions, it cannot be excluded that the BAT2/RsaI 2.7-kb band may contribute to the susceptibility to PBC, pSS, and SLE.
authors.affiliation: Department of Clinical Immunology, State University Hospital, Copenhagen, Denmark.
authors.forename: L
authors.initials: L
authors.lastname: Fugger
authors.forename: N
authors.initials: N
authors.lastname: Morling
authors.forename: L P
authors.initials: LP
authors.lastname: Ryder
authors.forename: B K
authors.initials: BK
authors.lastname: Jakobsen
authors.forename: V
authors.initials: V
authors.lastname: Andersen
authors.forename: P
authors.initials: P
authors.lastname: Oxholm
authors.forename: K
authors.initials: K
authors.lastname: Dalhoff
authors.forename: C
authors.initials: C
authors.lastname: Heilmann
authors.forename: F
authors.initials: F
authors.lastname: Karup Pedersen
authors.forename: J
authors.initials: J
authors.lastname: Friis
mesh_terms: D001327:Autoimmune Diseases / Q000235:genetics / Q000276:immunology*; D005819:Genetic Markers; D015235:HLA-B Antigens / Q000235:genetics*; D006801:Humans; D008105:Liver Cirrhosis, Biliary / Q000235:genetics / Q000276:immunology; D008180:Lupus Erythematosus, Systemic / Q000235:genetics / Q000276:immunology; D012150:Polymorphism, Restriction Fragment Length; D012859:Sjogren's Syndrome / Q000235:genetics / Q000276:immunology; D014158:Transcription, Genetic
chemical_list: D005819:Genetic Markers; D015235:HLA-B Antigens