title: NGF/BDNF chimeric proteins: analysis of neurotrophin specificity by homolog-scanning mutagenesis.
abstract: Despite their extensive sequence identities at the amino acid level (approximately 55%), NGF and brain-derived neurotrophic factor (BDNF) display distinct neuronal specificity toward neurons of both the PNS and CNS. To explore which region(s) within these neurotrophic factors might determine their differential actions on various subpopulations of peripheral neurons, a systematic series (homolog-scanning mutagenesis) of chimeric NGF/BDNF molecules was prepared using PCR overlap-extension techniques. After expression in COS-7 cells, the chimeric proteins were tested for their biological activities in neurite outgrowth and neuronal survival assays. This approach led to the functional expression of 12 NGF/BDNF chimeras. Surprisingly, despite replacing successive amino acid segments throughout the entire length of NGF with the corresponding parts of BDNF, all chimeras displayed full NGF-like activity in bioassays carried out with PC12 cells, embryonic chick dorsal root ganglion explants, sympathetic ganglion explants, and dissociated cultures of dorsal root ganglion neurons. Most of the chimeras additionally showed BDNF-like activity as defined by neurite outgrowth on chick nodose ganglion explants. However, none of the chimeras supported the survival of dissociated nodose ganglion neurons. Our results suggest that NGF and BDNF must share very similar higher-order protein structures, and we propose that the overall structure or conformation of NGF, in contrast to short amino acid "active-site" segments, may determine its exact neuronal specificity.
authors.affiliation: Department of Neurobiology, Stanford University School of Medicine, California 94305-5401.
authors.forename: U
authors.initials: U
authors.lastname: Suter
authors.forename: C
authors.initials: C
authors.lastname: Angst
authors.forename: C L
authors.initials: CL
authors.lastname: Tien
authors.forename: C C
authors.initials: CC
authors.lastname: Drinkwater
authors.forename: R M
authors.initials: RM
authors.lastname: Lindsay
authors.forename: E M
authors.initials: EM
authors.lastname: Shooter
mesh_terms: D000595:Amino Acid Sequence; D000818:Animals; D001483:Base Sequence; D001681:Biological Assay; D019208:Brain-Derived Neurotrophic Factor; D002460:Cell Line; D002470:Cell Survival; D002645:Chickens; D004247:DNA / Q000737:chemistry / Q000235:genetics; D005727:Ganglia, Spinal / Q000648:ultrastructure; D008969:Molecular Sequence Data; D016296:Mutagenesis; D009414:Nerve Growth Factors / Q000737:chemistry / Q000235:genetics / Q000494:pharmacology*; D009419:Nerve Tissue Proteins / Q000737:chemistry / Q000235:genetics / Q000494:pharmacology*; D016501:Neurites / Q000502:physiology; D009474:Neurons / Q000166:cytology / Q000502:physiology; D016133:Polymerase Chain Reaction; D011993:Recombinant Fusion Proteins / Q000737:chemistry / Q000235:genetics / Q000494:pharmacology*; D013329:Structure-Activity Relationship; D014162:Transfection
chemical_list: D019208:Brain-Derived Neurotrophic Factor; D009414:Nerve Growth Factors; D009419:Nerve Tissue Proteins; D011993:Recombinant Fusion Proteins; D004247:DNA