title: Influence of optical density on the automated segmentation of rat kidney lysosomes.
abstract: After staining for acid phosphatase, video-images were acquired from 0.5-micron sections of rat kidney. Lysosomes in proximal tubules were automatically segmented, using a VICOM digital image processor and measured for area, number and optical density (OD). The purpose of this study is to objectively evaluate the performance of the automated segmentation algorithm at different staining intensities (a) by measuring area after staining with different incubation times, reduced substrate concentration or by adding an inhibitor and (b) by 'simulating' a decrease in OD (reducing grey-values at each point of a digitized image). The results of the experiments showed that: (1) the algorithm will underestimate the size of lysosomes (a) when the OD in close to the local background and (b) when an area is larger than or close to the area of the lowpass square filter; (2) accuracy of the segmentation can be improved by comparing the results of feature extraction after segmentation of the same image at different relative OD levels; (3) lysosomes with very low OD, compared to background are delineated with a large error or not delineated at all and this cannot be corrected. Incorrectly delineated lysosomes can be identified and excluded from further calculations, or their measured area replaced by an estimate of the true area.
authors.affiliation: Department of Human Anatomy, Free University of Brussels, Belgium.
authors.forename: H
authors.initials: H
authors.lastname: Coen
authors.forename: F
authors.initials: F
authors.lastname: Roels
mesh_terms: D000135:Acid Phosphatase / Q000378:metabolism; D000465:Algorithms; D000818:Animals; D005069:Evaluation Studies as Topic; D007091:Image Processing, Computer-Assisted; D007668:Kidney / Q000033:anatomy & histology* / Q000378:metabolism; D008247:Lysosomes / Q000378:metabolism*; D008297:Male; D051381:Rats; D011919:Rats, Inbred Strains; D013194:Staining and Labeling
chemical_list: D000135:Acid Phosphatase