Genomic organization of the rat aromatic L-amino acid decarboxylase (AADC) locus: partial analysis reveals divergence from the Drosophila dopa decarboxylase (DDC) gene structure.
Aromatic L-amino acid decarboxylase (AADC) is responsible for the conversion of L-3,4-dihydroxyphenylalanine (L-DOPA) and L-5-hydroxytryptophan to dopamine and serotonin, respectively, which are important neurotransmitters. We characterized genomic clones derived from the rat AADC locus by Southern blot and nucleotide sequencing analyses to explore the exonal organization of the gene. Our results suggest that the rat AADC gene is relatively large, containing at least 12 exons and spanning at least 40 kb in the rat genome. In this study, nine exons corresponding to 71% of the published cDNA sequence were identified, the smallest of which was as short as 20 base pairs (bp). In the Drosophila dopa decarboxylase (DDC) gene, the sequences homologous to these nine exons are all present in the fourth exon. This implies that either multiple intron sequences have been added to the vertebrate AADC gene or alternatively, deleted from the invertebrate gene after the divergence of vertebrates and invertebrates during evolution.
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Laboratory of Molecular Neurobiology, Burke Medical Research Institute, Cornell University Medical College, White Plains, New York 10605.
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D000818:Animals; D001142:Aromatic-L-Amino-Acid Decarboxylases / Q000235:genetics*; D001483:Base Sequence; D015139:Blotting, Southern; D003001:Cloning, Molecular; D004296:Dopa Decarboxylase / Q000235:genetics*; D004330:Drosophila / Q000235:genetics*; D005091:Exons; D015698:Genomic Library; D008297:Male; D008969:Molecular Sequence Data; D051381:Rats / Q000235:genetics*; D011919:Rats, Inbred Strains; D012689:Sequence Homology, Nucleic Acid
D004296:Dopa Decarboxylase; D001142:Aromatic-L-Amino-Acid Decarboxylases