title: Enhancement of DNA replication by transcription factors NFI and NFIII/Oct-1 depends critically on the positions of their binding sites in the adenovirus origin of replication.
abstract: The origin of DNA replication of many human adenoviruses is composed of a highly conserved core origin and an auxiliary region, containing the binding sites for NFI and NFIII/Oct-1. We examined enhancement of DNA replication in vitro by the purified functional DNA-binding domains of NFI (NFI-BD) and NFIII/Oct-1 (the POU domain), using origins in which the positions of the binding sites for these proteins were transposed. Insertion or deletion of two or three base pairs between the core origin and the NFI binding site resulted in a 3-5-fold decrease of stimulation, whereas larger insertions gradually reduced the stimulation further. Mutants in which the NFI binding site was separated approximately one or two helical turns from the core origin by AT-rich sequences could still be stimulated by NFI. In contrast, insertion of two or more base pairs between the NFI and NFIII/Oct-1 binding sites abolished stimulation by NFIII/Oct-1 almost completely. Furthermore, stimulation by this protein was lost when the Ad2 NFIII/Oct-1 binding site was transposed to a position closer to the core origin, destroying the NFI binding site. This shows that the position of the NFIII/Oct-1 binding site is essential for stimulation. Models to explain these position-dependent effects on stimulation are discussed.
authors.affiliation: Laboratory for Physiological Chemistry, University of Utrecht, The Netherlands.
authors.forename: F E
authors.initials: FE
authors.lastname: Coenjaerts
authors.forename: E
authors.initials: E
authors.lastname: De Vries
authors.forename: G J
authors.initials: GJ
authors.lastname: Pruijn
authors.forename: W
authors.initials: W
authors.lastname: Van Driel
authors.forename: S M
authors.initials: SM
authors.lastname: Bloemers
authors.forename: N M
authors.initials: NM
authors.lastname: Van der Lugt
authors.forename: P C
authors.initials: PC
authors.lastname: Van der Vliet
mesh_terms: D000256:Adenoviridae / Q000235:genetics*; D001483:Base Sequence; D001665:Binding Sites; D002474:Cell-Free System; D004252:DNA Mutational Analysis; D004261:DNA Replication / Q000502:physiology*; D004279:DNA, Viral / Q000235:genetics; D004268:DNA-Binding Proteins / Q000378:metabolism*; D051863:Host Cell Factor C1; D008954:Models, Biological; D008969:Molecular Sequence Data; D050811:Octamer Transcription Factor-1; D014157:Transcription Factors / Q000378:metabolism*
chemical_list: D004279:DNA, Viral; D004268:DNA-Binding Proteins; D051863:Host Cell Factor C1; D050811:Octamer Transcription Factor-1; D014157:Transcription Factors