Conformation of cyclic octapeptides. VI. Structure of cyclo-bis-(-L-alanyl-glycyl-L-prolyl-L-phenylalanyl-) tetrahydrate.
C38H48N8O8.4H2O, Mr = 816.9, monoclinic, P21, a = 10.381 (1), b = 13.273 (1), c = 15.742 (1) A. beta = 101.83 (1) degree, V = 2123.1 A3, Z = 2, Dx = 1.278 g cm-3, lambda (Cu K alpha) = 1.5418 A, mu = 7.6 cm-1, F(000) = 872, R = 0.035, wR = 0.045 for 3497 reflections [I greater than 2 sigma (I)], 4552 unique reflections measured. The synthetic cyclic octapeptide crystallizes from water/methanol solution as a tetrahydrate and the crystals are isomorphous to those of the disulfide-bridged cystine analog cyclo-bis(-L-Cys-Gly-L-Pro-L-Phe-) [Kopple, Wang, Cheng & Bhandary (1988). J. Am. Chem. Soc. 110, 4168-4176]. The coordinates of the Cys analog were taken as the starting coordinates for full-matrix least-squares refinement. The cyclic octapeptide ring has two beta turns encompassing the residues Pro-L-Phe, one type I and the other type II, with all peptide links trans. The conformation of the cyclic octapeptide backbone is similar to the Cys analog; all backbone dihedral angles in the two molecules agree to within 6 degrees. This suggests that the disulfide bridge of the Cys analog does not impose any conformational constraint on the octapeptide ring backbone.
Bhandary
K K
KK
Oral Biology Department, School of Dental Medicine, University at Buffalo, New York 14214.
Kopple
K D
KD
D000595:Amino Acid Sequence; D008958:Models, Molecular; D008969:Molecular Sequence Data; D015394:Molecular Structure; D010456:Peptides, Cyclic / Q000737:chemistry*; D011487:Protein Conformation; D014961:X-Ray Diffraction
D010456:Peptides, Cyclic; C071633:cyclo-bis(alanyl-glycyl-prolyl-phenylalanyl)