title: Resonance Raman studies of the HOOP modes in octopus bathorhodopsin with deuterium-labeled retinal chromophores.
abstract: Resonance Raman spectra of the hydrogen out-of-plane (HOOP) vibrational modes in the retinal chromophore of octopus bathorhodopsin with deuterium label(s) along the polyene chain have been obtained. In clear contrast with bovine bathorhodopsin's HOOP modes, there are only two major HOOP bands at 887 and 940 cm-1 for octopus bathorhodopsin. On the basis of their isotopic shifts upon deuterium labeling, we have assigned the band at 887 cm-1 to C10H and C14H HOOP modes, and the band at 940 cm-1 to C11H = C12H Au-like HOOP mode. Except for a 26 cm-1 downward shift, the C11H = C12H Au-like wag appears to be little disturbed in octopus bathorhodopsin from the chromophore in solution since its changes upon deuterium labeling are close to those found in solution model-compound studies. We found also that the C10H and C14H HOOP wags are also similar to those in the model-compound studies. However, we have found that the interaction between the C7H and C8H HOOP internal coordinates of the chromophore in octopus bathorhodopsin is different from that of the chromophore in solution. The intensity of the C11H = C12H and the other HOOP modes suggests that the chromophore of octopus bathorhodopsin is somewhat torsionally distorted from a planar trans geometry. Importantly, a twist about C11 = C12 double bond is inferred. Such a twist breaks the local symmetry, resulting in the observation of the normally Raman-forbidden C11H = C12H Au-like HOOP mode. The twisted nature of the chromophore, semiquantitatively discussed here, likely affects the lambda max of the chromophore and its enthalpy.(ABSTRACT TRUNCATED AT 250 WORDS)
authors.affiliation: Department of Physics, City College, City University of New York, New York 10031.
authors.forename: H
authors.initials: H
authors.lastname: Deng
authors.forename: D
authors.initials: D
authors.lastname: Manor
authors.forename: G
authors.initials: G
authors.lastname: Weng
authors.forename: P
authors.initials: P
authors.lastname: Rath
authors.forename: Y
authors.initials: Y
authors.lastname: Koutalos
authors.forename: T
authors.initials: T
authors.lastname: Ebrey
authors.forename: R
authors.initials: R
authors.lastname: Gebhard
authors.forename: J
authors.initials: J
authors.lastname: Lugtenburg
authors.forename: M
authors.initials: M
authors.lastname: Tsuda
authors.forename: R H
authors.initials: RH
authors.lastname: Callender
mesh_terms: D000818:Animals; D002417:Cattle; D003903:Deuterium; D006859:Hydrogen / Q000737:chemistry; D049831:Octopodiformes; D012243:Rhodopsin / Q000031:analogs & derivatives* / Q000737:chemistry; D013059:Spectrum Analysis, Raman; D013816:Thermodynamics; D014732:Vibration
chemical_list: C015017:bathorhodopsin; D006859:Hydrogen; D012243:Rhodopsin; D003903:Deuterium