title: Definition of the human immunoglobulin variable lambda (IGLV) gene subgroups.
abstract: Comparison of 60 human immunoglobulin variable lambda (IGLV) sequences allowed us to define seven subgroups designated V lambda I to V lambda VII. We demonstrate that all lambda proteins sequenced so far fall into the subgroups I, II, III and VI, and that the lambda regions previously assigned to subgroups IV and V belong, in fact, to subgroups III and II, respectively. Four sequences not belonging to any of the subgroups I, II, III and VI define the new subgroups IV, V and VII. Interestingly, these subgroups show a higher homology to rabbit or mouse V lambda genes than to the other human V lambda subgroups. By comparison of the proteins either with the sequences deduced from the germ-line genes or with the consensus sequences, the rate of amino acid changes due to somatic mutations or allelic variations was evaluated in several lambda proteins. Framework and complementarity-determining regions of the human IGLV genes and proteins were delineated. Alignment of the lambda sequences shows that functional V-J rearrangement occurs, with or without deletion of nucleotides encoding one or two amino acids at the 3' end of the V gene. Diversity of the third complementarity-determining region is due to somatic mutations and to flexible V-J junction, but there is no evidence of N-diversity in the human lambda locus.
authors.affiliation: Laboratoire d'Immunogénétique Moléculaire, URA CNRS, Université Montpellier II, France.
authors.forename: P
authors.initials: P
authors.lastname: Chuchana
authors.forename: A
authors.initials: A
authors.lastname: Blancher
authors.forename: F
authors.initials: F
authors.lastname: Brockly
authors.forename: D
authors.initials: D
authors.lastname: Alexandre
authors.forename: G
authors.initials: G
authors.lastname: Lefranc
authors.forename: M P
authors.initials: MP
authors.lastname: Lefranc
mesh_terms: D000483:Alleles; D000595:Amino Acid Sequence; D000686:Amyloidosis / Q000276:immunology; D000818:Animals; D014644:Genetic Variation; D006801:Humans; D007132:Immunoglobulin Isotypes / Q000235:genetics; D007144:Immunoglobulin J-Chains / Q000235:genetics; D007133:Immunoglobulin Joining Region / Q000235:genetics; D007135:Immunoglobulin Variable Region / Q000235:genetics*; D007146:Immunoglobulin lambda-Chains / Q000235:genetics*; D008969:Molecular Sequence Data; D009154:Mutation; D012689:Sequence Homology, Nucleic Acid
chemical_list: D007132:Immunoglobulin Isotypes; D007144:Immunoglobulin J-Chains; D007133:Immunoglobulin Joining Region; D007135:Immunoglobulin Variable Region; D007146:Immunoglobulin lambda-Chains