title: Efficient aminoacylation of a yeast tRNA(Asp) transcript with a 5' extension.
abstract: A yeast aspartic acid tRNA with a 5' extension of 14 nucleotides was obtained by in vitro transcription with T7 DNA dependent RNA polymerase. This transcript, called extended tRNA(Asp) transcript, retains its aspartylation capacity with the same Km and only three times reduced kcat values as compared to those measured for canonical tRNA(Asp). This result indicates that the 5' extension of the amino acid acceptor stem of tRNA(Asp) does not interfere with recognition by aspartyl-tRNA synthetase. However, in contrast to the wild-type tRNA(Asp) transcript, the 5' extended molecule presents a reduced capacity to be mischarged by arginyl-tRNA synthetase, suggesting the existence of different structural requirements in aspartyl- and arginyl-tRNA synthetases for tRNA(Asp) recognition.
authors.affiliation: Laboratoire de Biochimie, Institut de Biologie Moléculaire et Cellulaire du CNRS, Strasbourg, France.
authors.forename: V
authors.initials: V
authors.lastname: Perret
authors.forename: C
authors.initials: C
authors.lastname: Florentz
authors.forename: R
authors.initials: R
authors.lastname: Giegé
mesh_terms: D001126:Arginine-tRNA Ligase / Q000378:metabolism; D001226:Aspartate-tRNA Ligase / Q000378:metabolism; D001483:Base Sequence; D008969:Molecular Sequence Data; D016297:Mutagenesis, Site-Directed; D011401:Promoter Regions, Genetic; D012331:RNA, Fungal / Q000235:genetics / Q000378:metabolism*; D012349:RNA, Transfer, Asp / Q000235:genetics / Q000378:metabolism*; D012441:Saccharomyces cerevisiae / Q000235:genetics*; D013329:Structure-Activity Relationship; D013604:T-Phages / Q000235:genetics; D046249:Transfer RNA Aminoacylation / Q000235:genetics*
chemical_list: D012331:RNA, Fungal; D012349:RNA, Transfer, Asp; D001226:Aspartate-tRNA Ligase; D001126:Arginine-tRNA Ligase