title: Length of the acyl carbonyl bond in acyl-serine proteases correlates with reactivity.
abstract: Resonance Raman (RR) spectroscopy has been used to obtain the vibrational spectrum of the acyl carbonyl group in a series of acylchymotrypsins and acylsubtilisins at the pH of optimum hydrolysis. The acyl-enzymes, which utilize arylacryloyl acyl groups, include three oxyanion hole mutants of subtilisin BPN', Asn155Leu, Asn155Gln, and Asn155Arg, and encompass a 500-fold range of deacylation rate constants. For each acyl-enzyme a RR carbonyl band has been identified which arises from a population of carbonyl groups undergoing nucleophilic attack in the active site. As the deacylation rate (k3) increases through the series of acyl-enzymes, the carbonyl stretching band (vC = O) is observed to shift to lower frequency, indicating an increase in single bond character of the reactive acyl carbonyl group. Experiments involving the oxyanion hole mutants of subtilisin BPN' indicate that a shift of vC = O to lower frequency results from stronger hydrogen bonding of the acyl carbonyl group in the oxyanion hole. A plot of log k3 against vC = O is linear over the range investigated, demonstrating that the changes in vC = O correlate with the free energy of activation for the deacylation reaction. By use of an empirical correlation between carbonyl frequency (vC = O) and carbonyl bond length (rC = O) it is estimated that rC = O increases by 0.015 A as the deacylation rate increases 500-fold through the series of acyl-enzymes. This change in rC = O is about 7% of that expected for going from a formal C = O double bond in the acyl-enzyme to a formal C-O single bond in the tetrahedral intermediate for deacylation. The data also allow us to estimate the energy needed to extend the acyl carbonyl group along its axis to be 950 kJ mol-1 A-1.
authors: Institute for Biological Sciences, National Research Council of Canada, Ottawa, Ontario.
authors: P J
authors: PJ
authors: Tonge
authors: P R
authors: PR
authors: Carey
mesh_terms: D000215:Acylation; D000838:Anions; D001665:Binding Sites; D002244:Carbon / Q000737:chemistry*; D055598:Chemical Phenomena; D002627:Chemistry, Physical; D002918:Chymotrypsin / Q000737:chemistry* / Q000378:metabolism; D006860:Hydrogen Bonding; D010100:Oxygen / Q000737:chemistry*; D013059:Spectrum Analysis, Raman; D013329:Structure-Activity Relationship; D013381:Subtilisins / Q000737:chemistry* / Q000378:metabolism
chemical_list: D000838:Anions; D002244:Carbon; D013381:Subtilisins; D002918:Chymotrypsin; D010100:Oxygen