title: Transferrin receptor internalization sequence YXRF implicates a tight turn as the structural recognition motif for endocytosis.
abstract: Using detailed functional studies on 24 human transferrin receptor mutants, we identified YXRF as the internalization sequence. Provided that at least 7 residues separate this tetrapeptide from the transmembrane region, changing the tetrapeptide position within the TR cytoplasmic domain does not reduce internalization activity. Thus, any conformational determinant for internalization must be localized to the YXRF sequence. Twenty-eight tetrapeptide analogs of YXRF, found by an unbiased search of all known three-dimensional protein structures, significantly favored tight turns similar to a type I turn. Of the ten tetrapeptides most closely related to YXRF, eight were surface exposed and had tight-turn conformations, as were four of five tetrapeptides with sequences related to the low density lipoprotein receptor internalization motif, NPXY. The internalization sequences of both receptors contain aromatic residues with intervening hydrogen-bonding residues. Thus, two distinct internalization sequences favor a common structural chemistry and implicate an exposed tight turn as the recognition motif for high efficiency endocytosis.
authors: Department of Cancer Biology, Salk Institute, San Diego, California 92138.
authors: J F
authors: JF
authors: Collawn
authors: M
authors: M
authors: Stangel
authors: L A
authors: LA
authors: Kuhn
authors: V
authors: V
authors: Esekogwu
authors: S Q
authors: SQ
authors: Jing
authors: I S
authors: IS
authors: Trowbridge
authors: J A
authors: JA
authors: Tainer
mesh_terms: D000595:Amino Acid Sequence; D000818:Animals; D002462:Cell Membrane / Q000378:metabolism; D002642:Chick Embryo; D002872:Chromosome Deletion; D003593:Cytoplasm / Q000378:metabolism; D004705:Endocytosis; D005347:Fibroblasts / Q000378:metabolism; D006801:Humans; D007700:Kinetics; D008958:Models, Molecular; D008969:Molecular Sequence Data; D016297:Mutagenesis, Site-Directed; D011487:Protein Conformation; D011973:Receptors, LDL / Q000235:genetics / Q000378:metabolism; D011990:Receptors, Transferrin / Q000235:genetics / Q000378:metabolism*; D012689:Sequence Homology, Nucleic Acid; D014162:Transfection
chemical_list: D011973:Receptors, LDL; D011990:Receptors, Transferrin