title: A note on graphing helical parameters of dynamics structure of DNA.
abstract: A graphical procedure for analysis of helical parameters in dynamic structure of DNA is described. The performance of the procedure is illustrated by analysis of a 20 ps dynamics simulation of the non-self-complementary ninemer, 5'CAAACAGGA:5'TCCTGTTTG, which is a part of DNA from lacI gene. The dynamics trajectory of the duplex shows sequence-dependent fluctuations of helical parameters.
authors.affiliation: Department of Chemistry, Harvard University, Cambridge, MA 02138.
authors.forename: A
authors.initials: A
authors.lastname: Galat
mesh_terms: D001483:Base Sequence; D003196:Computer Graphics; D004247:DNA / Q000737:chemistry*; D008958:Models, Molecular; D008969:Molecular Sequence Data; D009690:Nucleic Acid Conformation
chemical_list: D004247:DNA