Kinetics and mechanism of DNA repair. Preparation, purification and some properties of caged dideoxynucleoside triphosphates.
Caged dideoxyribosylthymine triphosphate, dideoxyadenosine triphosphate and arabinosylcytosine triphosphate were prepared in high yield by reaction with 1-(2-nitrophenyl)diazoethane at pH 4 and room temperature for 24 h. Synthesis of caged alpha-32P-labelled dideoxyadenosine triphosphate (approx. 5000 Ci/mmol) in 85% yield was achieved by a modification of the method used for the synthesis of the unlabelled compounds. ATP was shown to be an excellent buffer in the synthesis of alpha-32P-labelled material, and in caged form to be an effective carrier in h.p.l.c. purification. Preparative h.p.l.c. was used to achieve purification of unlabelled caged compounds to greater than 98% purity and 32P-labelled material to 97% purity. Photolysis of unlabelled and 32P-labelled caged compounds by using XeF-excimer laser irradiation at 351 nm was characterized by using difference spectrophotometry and h.p.l.c. analysis. The stability of caged dideoxyadenosine [a-32P]triphosphate in the presence of cultured mammalian cells was evaluated; the adenosine derivative is essentially stable for 1 h.
Meldrum
R A
RA
Department of Biochemistry, University of Birmingham, U.K.
Shall
S
S
Trentham
D R
DR
Wharton
C W
CW
D000818:Animals; D002478:Cells, Cultured; D055598:Chemical Phenomena; D002621:Chemistry; D002851:Chromatography, High Pressure Liquid; D004247:DNA / Q000528:radiation effects; D004249:DNA Damage; D004260:DNA Repair; D003838:Deoxyadenine Nucleotides; D015224:Dideoxynucleosides; D054306:Dideoxynucleotides; D000431:Ethanol / Q000031:analogs & derivatives; D007700:Kinetics; D051379:Mice; D009578:Nitrobenzenes; D010782:Photolysis; D013056:Spectrophotometry, Ultraviolet; D014466:Ultraviolet Rays
D003838:Deoxyadenine Nucleotides; D015224:Dideoxynucleosides; D054306:Dideoxynucleotides; D009578:Nitrobenzenes; C037773:2',3'-dideoxyadenosine triphosphate; C063593:1-(2-nitrophenyl)ethanol; D000431:Ethanol; D004247:DNA