The Athena semi-automated karyotyping system.
In this article we describe Athena, a system that provides for semi-automated karyotyping of metaphase spreads. The system is based upon the Macintosh II computer. It uses software that is written entirely in C and consists of approximately 200 Kbytes of executable code. Athena provides automated segmentation of metaphase images into individual chromosomes, automated measurements on each banded chromosome, and automated classification into the standard Paris-convention karyotype. Furthermore, the system provides the ability to construct one or more chromosome data bases to represent the types of metaphase spreads and staining techniques that may be used in a given laboratory. Because we believe that it is impossible to construct a system that can achieve perfect segmentation, perfect separation of touching and overlapping chromosomes, perfect localization of the centromeres, and perfect classification, the system offers the possibility for interaction at each of the above stages using the well-accepted Macintosh user interface.
van Vliet
L J
LJ
Faculty of Applied Physics, Delft University of Technology, The Netherlands.
Young
I T
IT
Mayall
B H
BH
D002503:Centromere; D006801:Humans; D007091:Image Processing, Computer-Assisted / Q000379:methods*; D007621:Karyotyping / Q000295:instrumentation*; D010363:Pattern Recognition, Automated