title: Evidence for false aneuploid peaks in flow cytometric analysis of paraffin-embedded tissue.
abstract: It has recently been shown that bimodal histograms with false aneuploid peaks may be obtained by DNA flow cytometry from histologically normal tissue allowed to autolyze. To investigate if such peaks can be generated from surgically excised archival tissue, 198 paraffin blocks from 179 patients containing histologically normal spleen (n = 65), liver (n = 26), thyroid (n = 32), pancreas (n = 19), salivary gland (n = 49), or lymph node tissue (n = 7), obtained from the archives of two university pathology departments, were analyzed for nuclear DNA content. The great majority (n = 160, 83.8%) of the 191 interpretable histograms had a single symmetrical G1 peak; and 8 histograms, all produced from liver tissue had a tetraploid pattern. A slight or a prominent repeatable deviation in the G1 peak outline was present in 14 (7.3%) cases. A peak resembling an aneuploid G1 peak with a DNA index (DI) ranging from 1.14 to 1.38 was repeatedly produced from 9 (4.7%) blocks containing histologically normal or inflamed splenic (n = 3), pancreatic (n = 3), liver (n = 1), thyroid (n = 1), or lymph node (n = 1) tissue. The three abnormal peaks produced from pancreatic tissue were rounded in shape and resembled closely the ones that can be obtained from autolytic pancreatic tissue, and the six remaining extra peaks were all fused with the "diploid" peak. In conclusion, false peaks, probably caused by degradation of the nuclear contents during formalin fixation or before it, may rarely be obtained from surgical paraffin-embedded samples.
authors.affiliation: Department of Radiotherapy, Turku University Central Hospital, Finland.
authors.forename: H
authors.initials: H
authors.lastname: Joensuu
authors.forename: K A
authors.initials: KA
authors.lastname: Alanen
authors.forename: P J
authors.initials: PJ
authors.lastname: Klemi
authors.forename: R
authors.initials: R
authors.lastname: Aine
mesh_terms: D000782:Aneuploidy; D004247:DNA / Q000032:analysis*; D005188:False Negative Reactions; D005434:Flow Cytometry / Q000379:methods*; D006801:Humans; D010232:Paraffin; D013154:Spleen / Q000032:analysis / Q000166:cytology; D013961:Thyroid Gland / Q000032:analysis / Q000166:cytology
chemical_list: D010232:Paraffin; D004247:DNA