Factor-independent termination of transcription in a stretch of deoxyadenosine residues in the template DNA.
The primer transcript of plasmid ColE1 extends beyond the replication origin in either of two different modes. It does or does not form a hybrid with the template DNA. When a stretch of 20 deoxyadenosine residues is inserted into the template strand downstream of the origin, more than 90% of hybridized transcripts and about 10% of unhybridized transcripts terminate at the insert. When the number of inserted residues is reduced to ten, the corresponding values are decreased considerably, while the sites of termination are almost unchanged. A palindrome immediately before the stretch increased the efficiency of termination of unhybridized transcripts. Upon termination of hybridized transcripts, RNA polymerase detaches from the template. A structure made by a hybrid or by folded RNA may affect a property of transcription, and a stretch of deoxyadenosine residues including those beyond the actual site of termination may facilitate detachment of RNA polymerase from the template DNA.
D003086:Bacteriocin Plasmids; D001483:Base Sequence; D004269:DNA, Bacterial / Q000235:genetics*; D012321:DNA-Directed RNA Polymerases / Q000378:metabolism; D003839:Deoxyadenosines; D004926:Escherichia coli / Q000235:genetics*; D005809:Genes, Regulator; D009690:Nucleic Acid Conformation; D012329:RNA, Bacterial / Q000096:biosynthesis; D013698:Templates, Genetic; D013728:Terminator Regions, Genetic; D014158:Transcription, Genetic
D004269:DNA, Bacterial; D003839:Deoxyadenosines; D012329:RNA, Bacterial; D012321:DNA-Directed RNA Polymerases