title: Asymmetry and free energy transduction in biology.
abstract: This paper is an extension of our earlier theoretical studies on the relationship between kinetic asymmetry and free-energy transductions in biological systems induced by external fluctuations. In the first part of the paper, the asymmetry conditions necessary for external-noise-induced free-energy transductions to occur are derived for a special cyclic, four-state model in which only one reaction step is perturbed by the fluctuations. The results can be used to explain the earlier findings that asymmetry in rate constants was not required in the uphill transport of ligands induced by externally fluctuating the ligand concentrations. In the second part of the paper, the coupling between two enzyme systems through direct enzyme-enzyme interactions is studied. The existence of kinetic asymmetry in both the driving and the driven enzyme systems is found necessary for coupling and free-energy transduction to occur.
mesh_terms: D000818:Animals; D001692:Biological Transport; D002352:Carrier Proteins / Q000378:metabolism; D004734:Energy Metabolism; D004798:Enzymes / Q000378:metabolism; D007700:Kinetics; D008954:Models, Biological; D013816:Thermodynamics
chemical_list: D002352:Carrier Proteins; D004798:Enzymes