title: Characterization of a polyubiquitin gene from Arabidopsis thaliana.
abstract: Ubiquitin DNA sequences were isolated from the higher plant Arabidopsis thaliana L. by screening a lambda-gt11 genomic library with antibodies raised against oat and human ubiquitin. DNA sequence analysis showed that the predicted protein sequence is 100% conserved with that found in oat and barley and differs by only three residues to that found in animals. This gene (UBQ4) encodes a ubiquitin polyprotein with five repeats contiguously linked with no intervening sequences in the coding region and a C-terminal extension of Ser-Phe. Genomic Southern blot analysis showed that ubiquitin sequences comprise a multigene family of approximately 11 members in Arabidopsis. Northern blot analysis identified at least four transcript size classes, which accumulate in sizes ranging from 800 to 1900 bases. A 5'-specific probe for the UBQ4 gene was used to show that after 2 h heat shock stress, the steady state mRNA level decreased significantly in flowers/buds but not in leaves. The UBQ4 transcript accumulates in a differential manner, accumulating to higher levels in germinating tissue, etiolated tissue, and flowers/buds than in mature leaves, roots, or stems.
authors: Department of Horticulture, University of Wisconsin-Madison 53706.
authors: T J
authors: TJ
authors: Burke
authors: J
authors: J
authors: Callis
authors: R D
authors: RD
authors: Vierstra
mesh_terms: D000595:Amino Acid Sequence; D001483:Base Sequence; D003001:Cloning, Molecular; D004247:DNA / Q000235:genetics; D006360:Heat-Shock Proteins / Q000235:genetics; D008969:Molecular Sequence Data; D005810:Multigene Family; D010944:Plants / Q000235:genetics* / Q000378:metabolism; D012313:RNA / Q000235:genetics / Q000378:metabolism; D015183:Restriction Mapping; D014158:Transcription, Genetic; D014452:Ubiquitins / Q000235:genetics*
chemical_list: D006360:Heat-Shock Proteins; D014452:Ubiquitins; D012313:RNA; D004247:DNA