Nucleotide sequence of IS492, a novel insertion sequence causing variation in extracellular polysaccharide production in the marine bacterium Pseudomonas atlantica.
The complete nucleotide sequence of insertion element IS492, which causes reversible inactivation of extracellular polysaccharide production in the marine bacterium Pseudomonas atlantica, is presented. Insertion of IS492 results in the EPS- phenotype, and excision results in restoration of EPS+. DNA sequencing of the site of insertion in the eps locus showed that insertion of IS492 generates a 5-base-pair repeat and that its excision is precise. IS492 is 1,202 nucleotides in length and contains one large open reading frame encoding a protein of 318 amino acids, a candidate for transposition function. No similarity between IS492 and other transposable elements has been found. Unlike the situation with other insertion sequences, no direct or inverted repeats exist at the termini of IS492.
Bartlett
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Agouron Institute, La Jolla, California 92037.
Silverman
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D000595:Amino Acid Sequence; D001483:Base Sequence; D004251:DNA Transposable Elements; D014644:Genetic Variation; D008969:Molecular Sequence Data; D011135:Polysaccharides, Bacterial / Q000096:biosynthesis / Q000235:genetics*; D011549:Pseudomonas / Q000235:genetics* / Q000276:immunology; D012623:Seawater
D004251:DNA Transposable Elements; D011135:Polysaccharides, Bacterial