title: An oligonucleotide probe specific for Onchocerca volvulus.
abstract: A genomic DNA library of a Liberian strain of Onchocerca volvulus was prepared in the vector bacteriophage lambda gt10. The library was differentially screened by hybridisation with radiolabelled total DNA from the homologous parasite, two heterologous Onchocerca parasites (Onchocerca gibsoni and Onchocerca gutturosa) and human liver cells. A clone (C1A1) was isolated whose binding to O. volvulus DNA was at least 50 times stronger than to the other parasite DNA samples. No binding was observed with human DNA. The insert of C1A1 was subcloned into the filamentous phage vector M13 mp18 and sequenced. Two oligonucleotides, each corresponding to a unique region of 60 nucleotides (out of a total of 154) were synthesised and examined for hybridisation with three different geographical isolates of O. volvulus (including forest and savannah strains) and six other Onchocerca spp. One of the oligonucleotides (C1A1-2) was found to hybridise to the three O. volvulus isolates with an intensity in the region of 300 times greater than to any other Onchocerca spp. Since the other species include the two which may be most closely related to O. volvulus, i.e., O. gibsoni and Onchocerca ochengi, it is concluded that C1A1-2 is likely to represent a truly species-specific probe.
authors.affiliation: Division of Parasitology, National Institute for Medical Research, London, U.K.
authors.forename: W
authors.initials: W
authors.lastname: Harnett
authors.forename: A E
authors.initials: AE
authors.lastname: Chambers
authors.forename: A
authors.initials: A
authors.lastname: Renz
authors.forename: R M
authors.initials: RM
authors.lastname: Parkhouse
mesh_terms: D000818:Animals; D010582:Bacteriophage lambda / Q000235:genetics; D001483:Base Sequence; D005075:Biological Evolution; D003001:Cloning, Molecular; D004247:DNA / Q000302:isolation & purification*; D008969:Molecular Sequence Data; D015345:Oligonucleotide Probes; D009854:Onchocerca / Q000235:genetics* / Q000302:isolation & purification; D013045:Species Specificity
chemical_list: D015345:Oligonucleotide Probes; D004247:DNA