Orientational and rotational velocity correlation functions for water-hydrating B- and Z-DNA double helices.
The molecular dynamics simulations reported earlier for the structure and dynamics of water molecules hydrating B- and Z-DNA double helices are analyzed for the orientational correlation functions and the proton rotational velocity autocorrelation functions. The spectra of the rotational velocity autocorrelation functions obtained from the simulation results are compared with the neutron inelastic scattering experiments on hydrated Na-DNA samples. The results predict a small frequency component associated with water molecules bound to the double helices that disappears for waters away from the double helix.
Swamy
K N
KN
Clementi
E
E
D055598:Chemical Phenomena; D002627:Chemistry, Physical; D004247:DNA; D015394:Molecular Structure; D009502:Neutrons; D009690:Nucleic Acid Conformation; D011522:Protons; D013057:Spectrum Analysis; D014867:Water
D011522:Protons; D014867:Water; D004247:DNA