title: Structure and copy number of gene clusters related to the pap P-adhesin operon of uropathogenic Escherichia coli.
abstract: The structurally related pap and prs operons of the uropathogenic Escherichia coli isolate J96 encode a P and an F adhesin that mediate bacterial attachment to the human P blood group antigen and the Forssman antigen, respectively. Using probes prepared from different segments of the pap operon, Southern blot hybridizations were performed to characterize pap-related sequences of 30 E. coli clinical isolates expressing different adhesin phenotypes. Gene clusters encoding P and F adhesins displayed no restriction site polymorphism in sequences homologous to the papH, papC, and papD genes that encode proteins essential to the transport and polymerization of the subunits of the P-pilus adhesin. In contrast, pap-related genetic elements associated with a null phenotype either lacked homology to the papH, papC, and papD genes or displayed a restriction site polymorphism in this region. Sequences within and surrounding the J96 papG and prsG adhesin genes that determine the binding specificities to the P and F antigens, respectively, were not conserved. However, gene clusters encoding different binding specificities could not be distinguished based on such restriction site polymorphisms. The majority of clinical isolates had more than one copy of pap-related sequences that involved gene clusters similar to the J96 pap operon, as well as genetic elements that were related only to a part of this operon. The implications of this unexpected copy number polymorphism with respect to possible recombination events involving pap-related sequences are discussed.
authors.affiliation: Maxwell Finland Laboratory for Infectious Diseases, Boston University School of Medicine, Massachusetts 02118.
authors.forename: M
authors.initials: M
authors.lastname: Arthur
authors.forename: C
authors.initials: C
authors.lastname: Campanelli
authors.forename: R D
authors.initials: RD
authors.lastname: Arbeit
authors.forename: C
authors.initials: C
authors.lastname: Kim
authors.forename: S
authors.initials: S
authors.lastname: Steinbach
authors.forename: C E
authors.initials: CE
authors.lastname: Johnson
authors.forename: R H
authors.initials: RH
authors.lastname: Rubin
authors.forename: R
authors.initials: R
authors.lastname: Goldstein
mesh_terms: D018830:Adhesins, Escherichia coli; D001425:Bacterial Outer Membrane Proteins / Q000235:genetics*; D015342:DNA Probes; D004261:DNA Replication; D015252:Deoxyribonucleases, Type II Site-Specific; D004927:Escherichia coli Infections / Q000235:genetics / Q000382:microbiology*; D005798:Genes, Bacterial; D006801:Humans; D005810:Multigene Family; D009690:Nucleic Acid Conformation; D009876:Operon; D012150:Polymorphism, Restriction Fragment Length; D014552:Urinary Tract Infections / Q000235:genetics / Q000382:microbiology*
chemical_list: D018830:Adhesins, Escherichia coli; D001425:Bacterial Outer Membrane Proteins; D015342:DNA Probes; C024388:CTGCAG-specific type II deoxyribonucleases; D015252:Deoxyribonucleases, Type II Site-Specific