title: Conformational substates of myoglobin detected by extrinsic dynamic fluorescence studies.
abstract: The extent of conformational substates of two apomyoglobins, i.e., sperm whale and tuna apomyoglobin, was investigated by examining the fluorescence decay in the frequency domain of the extrinsic fluorophore TNS [6-(p-toluidino)-2-naphthalenesulfonic acid] bound to the heme binding site. Data analysis was performed in terms of a continuous, unimodal lifetime distribution having a Lorentzian shape. The results were compared with those for the free fluorophore in an isotropic nonviscous solvent. The incorporation of TNS into the protein matrix resulted in a broadening of the lifetime distribution due to the microenvironmental heterogeneity generated by structural fluctuations. The larger width of lifetime distribution observed for TNS bound to tuna apomyoglobin was related to a more extended conformational space accessible to the fluorophore in this protein compared to sperm whale myoglobin. A temperature increase from 15 to 40 degrees C produced a further broadening of the lifetime distributions of TNS bound to both proteins. This result can be explained by assuming the existence of conformational substates at high energy content or separated by high energy barriers, which are not populated at low temperature. The overall picture emerging from the reported data is that the lifetime distributions of TNS bound to apomyoglobins are determined largely by the number of conformational substates accessible to the protein matrix and, to a lesser extent, by the interconversion rates among these states.
authors.affiliation: Dipartimento di Biochimica e Biofisica, Università degli Studi di Napoli, Italy.
authors.forename: E
authors.initials: E
authors.lastname: Bismuto
authors.forename: I
authors.initials: I
authors.lastname: Sirangelo
authors.forename: G
authors.initials: G
authors.lastname: Irace
mesh_terms: D000818:Animals; D008297:Male; D009211:Myoglobin / Q000032:analysis*; D011487:Protein Conformation; D013050:Spectrometry, Fluorescence / Q000379:methods; D013094:Spermatozoa / Q000032:analysis; D014413:Tuna; D014907:Whales
chemical_list: D009211:Myoglobin