Identification of the magnesium, europium and lead binding sites in E. coli and lupine tRNAPhe by specific metal ion-induced cleavages.
The Pb, Eu and Mg-induced cleavages in E. coli and lupine tRNAPhe have been characterized and compared with those found in yeast tRNAPhe. The pattern of lupine tRNAPhe hydrolysis closely resembles that of yeast tRNAPhe, while several major differences occur in the specificity and efficiency of the E. coli tRNAPhe hydrolysis. The latter tRNA is cleaved with much lower yield in the D-loop, and interestingly, cleavage is also detected in the variable region, that is highly resistant to hydrolysis in eukaryotic tRNAs. The possible location of tight Pb, Eu and Mg binding sites in E. coli tRNAPhe is discussed on the basis of the specific hydrolysis data.
Marciniec
T
T
Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznan.
Ciesiołka
J
J
Wrzesinski
J
J
Krzyzosiak
W J
WJ
D001483:Base Sequence; D001665:Binding Sites / Q000187:drug effects; D004926:Escherichia coli / Q000378:metabolism; D005063:Europium / Q000378:metabolism; D007887:Fabaceae / Q000378:metabolism; D006868:Hydrolysis; D007854:Lead / Q000378:metabolism; D008274:Magnesium / Q000378:metabolism; D008670:Metals / Q000378:metabolism* / Q000494:pharmacology; D008969:Molecular Sequence Data; D009690:Nucleic Acid Conformation; D010946:Plants, Medicinal; D012345:RNA, Transfer, Amino Acid-Specific / Q000378:metabolism*; D012360:RNA, Transfer, Phe / Q000378:metabolism*; D012441:Saccharomyces cerevisiae / Q000378:metabolism
D008670:Metals; D012345:RNA, Transfer, Amino Acid-Specific; D012360:RNA, Transfer, Phe; D007854:Lead; D005063:Europium; D008274:Magnesium