title: Time-resolved absorption, circular dichroism, and emission of tRNA. Evidence that the photo-cross-linking of 4-thiouridine in tRNA occurs from the triplet state.
abstract: The time-resolved optical density (TROD) and time-resolved circular dichroism (TRCD) spectra of the lowest triplet state of 4-thiouridine (4t-Urd) in aqueous solutions of tRNA are reported. The TROD spectrum is consistent with the triplet state being primarily in the thione tautomer. The intersystem crossing yield to the triplet is 0.35 and 0.27 (+/- 10%), respectively, with and without 10(-2) Mg2+ added to the solution. Upon addition of increasing amounts of I- to solutions of tRNA, the initial triplet yield decreases, the rate of the observed triplet decay increases, and the quantum yield of internal photo-cross-linking decreases for the 4t-Urd chromophore. The results show quantitatively that the near-UV-induced photo-cross-linking reaction in tRNA occurs from the triplet state of 4t-Urd. From the TRCD spectrum the dissymmetry factor (delta epsilon/epsilon) of some of the triplet-triplet absorption bands is shown to be significantly larger than for any of the ground-state absorption bands. Two CD transitions are seen in the triplet-triplet spectrum which are obscured in the TROD spectrum by the strong ground-state bleaching signal near 335 nm. This shows that TRCD may be useful, in some cases, in locating electronic transitions that are not observed in TROD spectra.
authors.affiliation: Department of Chemistry, University of California, Santa Cruz 95064.
authors.forename: S J
authors.initials: SJ
authors.lastname: Milder
authors.forename: P S
authors.initials: PS
authors.lastname: Weiss
authors.forename: D S
authors.initials: DS
authors.lastname: Kliger
mesh_terms: D055598:Chemical Phenomena; D002627:Chemistry, Physical; D002942:Circular Dichroism / Q000379:methods; D003432:Cross-Linking Reagents; D008027:Light; D010777:Photochemistry; D012343:RNA, Transfer; D013891:Thiouridine; D013995:Time; D013997:Time Factors
chemical_list: D003432:Cross-Linking Reagents; D013891:Thiouridine; D012343:RNA, Transfer