[Phylogenetic analysis of partial nucleotide sequences of 18S rRNA for 14 plant species].
The variable 260 base long region from the interior of 18S rRNA of 14 plant species was determined by chain termination method with the use of reverse transcriptase. The hairpin revealed in this region appeared to be conservative in all species compared. Thermodynamic stability of such hairpin is lower than of an alternative structure with different base pairing mode. From sequence data dendrograms were produced by clustering algorithms and by the compatibility method. In addition to the plant sequences these dendrograms included also the homologous regions from yeast and Xenopus 18S rRNAs. The compatibility method seems to be more reliable. Inferences were drawn on relations between gymnosperms and angiosperms, monocots and dicots on the bases of the analysis of this tree.
Rakhimova
G M
GM
Troitskiĭ
A V
AV
Klikunova
I N
IN
Antonov
A S
AS
D001483:Base Sequence; D008969:Molecular Sequence Data; D009690:Nucleic Acid Conformation; D010802:Phylogeny; D010944:Plants / Q000235:genetics*; D012335:RNA, Ribosomal / Q000235:genetics*; D012337:RNA, Ribosomal, 18S / Q000235:genetics*; D013045:Species Specificity
D012335:RNA, Ribosomal; D012337:RNA, Ribosomal, 18S
Filogeneticheskiĭ analiz chastichnykh nukleotidnykh posledovatel'- nosteĭ 18S rRNK 14 vidov rasteniĭ.