title: Two copies of the human apolipoprotein C-I gene are linked closely to the apolipoprotein E gene.
abstract: The gene for human apolipoprotein (apo) C-I was selected from human genomic cosmid and lambda libraries. Restriction endonuclease analysis showed that the gene for apoC-I is located 5.5 kilobases downstream of the gene for apoE. A copy of the apoC-I gene, apoC-I', is located 7.5 kilobases downstream of the apoC-I gene. Both genes contain four exons and three introns; the apoC-I gene is 4653 base pairs long, the apoC-I' gene 4387 base pairs. In each gene, the first intron is located 20 nucleotides upstream from the translation start signal; the second intron, within the codon of Gly-7 of the signal peptide region; and the third intron, within the codon for Arg39 of the mature plasma protein coding region. The upstream apoC-I gene encodes the known apoC-I plasma protein and differs from the downstream apoC-I' gene in about 9% of the exon nucleotide positions. The most important difference between the exons results in a change in the codon for Gln-2 of the signal peptide region, which introduces a translation stop signal in the downstream gene. Major sequence differences are found in the second and third introns of the apoC-I and apoC-I' genes, which contain 9 and 7.5 copies, respectively, of Alu family sequences. The apoC-I gene is expressed primarily in the liver, and it is activated when monocytes differentiate into macrophages. In contrast, no mRNA product of the apoC-I' gene can be detected in any tissue, suggesting that it may be a pseudogene. The similar structures and the proximity of the apoE and apoC-I genes suggest that they are derived from a common ancestor. Furthermore, they may be considered to be constituents of a family of seven apolipoprotein genes (apoE, -C-I, -C-II, -C-III, -A-I, -A-II, and -A-IV) that have a common evolutionary origin.
authors.affiliation: Gladstone Foundation Laboratories for Cardiovascular Disease, University of California, San Francisco 94140-0608.
authors.forename: S J
authors.initials: SJ
authors.lastname: Lauer
authors.forename: D
authors.initials: D
authors.lastname: Walker
authors.forename: N A
authors.initials: NA
authors.lastname: Elshourbagy
authors.forename: C A
authors.initials: CA
authors.lastname: Reardon
authors.forename: B
authors.initials: B
authors.lastname: Levy-Wilson
authors.forename: J M
authors.initials: JM
authors.lastname: Taylor
mesh_terms: D000595:Amino Acid Sequence; D053302:Apolipoprotein C-I; D001053:Apolipoproteins / Q000235:genetics; D001056:Apolipoproteins C / Q000235:genetics*; D001057:Apolipoproteins E / Q000235:genetics*; D001483:Base Sequence; D005075:Biological Evolution; D003001:Cloning, Molecular; D004262:DNA Restriction Enzymes; D005091:Exons; D005796:Genes; D008040:Genetic Linkage; D006801:Humans; D008099:Liver / Q000378:metabolism; D008264:Macrophages / Q000378:metabolism; D008297:Male; D008969:Molecular Sequence Data; D009928:Organ Specificity
chemical_list: D053302:Apolipoprotein C-I; D001053:Apolipoproteins; D001056:Apolipoproteins C; D001057:Apolipoproteins E; D004262:DNA Restriction Enzymes